MS010647 (gene) Bitter gourd (TR) v1

Overview


Name	MS010647
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-acyltransferase
Location	scaffold35: 1182787 .. 1182990 (-)
RNA-Seq Expression	MS010647
Synteny	MS010647

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTATGAGAGGCAGTTTGATTATCATCTGCAGGAGCGTTCCTGAAAGAGTTTACCCCTTCAGCAAAGGAGTCTGCCATAACTTGTACGAATTCTGCTGCGATAGAAGCAACGTCTATAACTTGGAGCCCTTGCCTTCGGCTCAAGTACTCGAAGAGAGATCGAGACCGTACACGTGTTCGGACATGGTGAGATGTAGATGCTGC

mRNA sequence

GTTATGAGAGGCAGTTTGATTATCATCTGCAGGAGCGTTCCTGAAAGAGTTTACCCCTTCAGCAAAGGAGTCTGCCATAACTTGTACGAATTCTGCTGCGATAGAAGCAACGTCTATAACTTGGAGCCCTTGCCTTCGGCTCAAGTACTCGAAGAGAGATCGAGACCGTACACGTGTTCGGACATGGTGAGATGTAGATGCTGC

Coding sequence (CDS)

GTTATGAGAGGCAGTTTGATTATCATCTGCAGGAGCGTTCCTGAAAGAGTTTACCCCTTCAGCAAAGGAGTCTGCCATAACTTGTACGAATTCTGCTGCGATAGAAGCAACGTCTATAACTTGGAGCCCTTGCCTTCGGCTCAAGTACTCGAAGAGAGATCGAGACCGTACACGTGTTCGGACATGGTGAGATGTAGATGCTGC

Protein sequence

VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCSDMVRCRCC

Homology

[Close]

BLAST of MS010647 vs. NCBI nr
Match: XP_022133117.1 (protein S-acyltransferase 10 [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 2.8e-28
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   RSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS
Sbjct: 277 LVRRRRIFYLRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 336

Query: 61  DMVRCRCC 69
           DMVRCRCC
Sbjct: 337 DMVRCRCC 344

[Close]

BLAST of MS010647 vs. NCBI nr
Match: XP_038882990.1 (protein S-acyltransferase 10 [Benincasa hispida])

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 53/68 (77.94%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   RS+PERVYPFSKGVC NLY+FCC+RSN+YNLEPLPSAQVLEERSRPYTCS
Sbjct: 276 LVRRRRIFYLRSIPERVYPFSKGVCRNLYDFCCNRSNIYNLEPLPSAQVLEERSRPYTCS 335

Query: 61  DMVRCRCC 69
           D+ RCRCC
Sbjct: 336 DITRCRCC 343

[Close]

BLAST of MS010647 vs. NCBI nr
Match: XP_023544300.1 (protein S-acyltransferase 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 52/68 (76.47%), Postives = 60/68 (88.24%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   R +PERVYPFSKGVCHNLY+FCC RSN+YNLEPLPSAQ+LEERSRPYTCS
Sbjct: 276 LVRRRRIFYLRGIPERVYPFSKGVCHNLYDFCCHRSNIYNLEPLPSAQMLEERSRPYTCS 335

Query: 61  DMVRCRCC 69
           D++RCRCC
Sbjct: 336 DIMRCRCC 343

[Close]

BLAST of MS010647 vs. NCBI nr
Match: XP_022977303.1 (protein S-acyltransferase 10-like [Cucurbita maxima])

HSP 1 Score: 124.4 bits (311), Expect = 3.8e-25
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   R +PERVYPFSKGVCHNLY+FCC RSN+YNLEPLPSAQ+LEERSRPYTCS
Sbjct: 276 LVRRRRIFYLRGIPERVYPFSKGVCHNLYDFCCHRSNIYNLEPLPSAQMLEERSRPYTCS 335

Query: 61  DMVRCRCC 69
           D+ RCRCC
Sbjct: 336 DITRCRCC 343

[Close]

BLAST of MS010647 vs. NCBI nr
Match: XP_008440889.1 (PREDICTED: protein S-acyltransferase 10 [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   RS+PERVYPFSKGVC NLYEFCC R N+YNLEPLPSAQV+EERSRPYTCS
Sbjct: 280 LVRRRRIFYLRSLPERVYPFSKGVCRNLYEFCCHRGNIYNLEPLPSAQVIEERSRPYTCS 339

Query: 61  DMVRCRCC 69
           D++RCRCC
Sbjct: 340 DIMRCRCC 347

[Close]

BLAST of MS010647 vs. ExPASy Swiss-Prot
Match: Q7XA86 (Protein S-acyltransferase 10 OS=Arabidopsis thaliana OX=3702 GN=PAT10 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.8e-15
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   R++P RV+PFS+G+  NLY  CC     YNL+ LP+A  LE+RSRPYTC 
Sbjct: 276 LVRRRRIPYMRNIPGRVHPFSRGIRRNLYNVCCGN---YNLDSLPTAFELEDRSRPYTCI 335

Query: 61  DMVRCRCC 69
           DM++CRCC
Sbjct: 336 DMLKCRCC 340

[Close]

BLAST of MS010647 vs. ExPASy TrEMBL
Match: A0A6J1BVQ2 (S-acyltransferase OS=Momordica charantia OX=3673 GN=LOC111005792 PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-28
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   RSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS
Sbjct: 277 LVRRRRIFYLRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 336

Query: 61  DMVRCRCC 69
           DMVRCRCC
Sbjct: 337 DMVRCRCC 344

[Close]

BLAST of MS010647 vs. ExPASy TrEMBL
Match: A0A6J1IPK7 (S-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111477665 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-25
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   R +PERVYPFSKGVCHNLY+FCC RSN+YNLEPLPSAQ+LEERSRPYTCS
Sbjct: 276 LVRRRRIFYLRGIPERVYPFSKGVCHNLYDFCCHRSNIYNLEPLPSAQMLEERSRPYTCS 335

Query: 61  DMVRCRCC 69
           D+ RCRCC
Sbjct: 336 DITRCRCC 343

[Close]

BLAST of MS010647 vs. ExPASy TrEMBL
Match: A0A1S3B260 (S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103485175 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.9e-25
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   RS+PERVYPFSKGVC NLYEFCC R N+YNLEPLPSAQV+EERSRPYTCS
Sbjct: 280 LVRRRRIFYLRSLPERVYPFSKGVCRNLYEFCCHRGNIYNLEPLPSAQVIEERSRPYTCS 339

Query: 61  DMVRCRCC 69
           D++RCRCC
Sbjct: 340 DIMRCRCC 347

[Close]

BLAST of MS010647 vs. ExPASy TrEMBL
Match: A0A0A0KMN6 (S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G507440 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-24
Identity = 51/68 (75.00%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   RS+PERVYPFSKGVC NLY+FCC R N+YN EPLPSAQVLEERSRPYTCS
Sbjct: 280 LVRRRRIFYLRSIPERVYPFSKGVCRNLYDFCCQRGNIYNFEPLPSAQVLEERSRPYTCS 339

Query: 61  DMVRCRCC 69
           D+ RCRCC
Sbjct: 340 DIYRCRCC 347

[Close]

BLAST of MS010647 vs. ExPASy TrEMBL
Match: A0A6J1GEE1 (S-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111453409 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-24
Identity = 51/68 (75.00%), Postives = 59/68 (86.76%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   R +PERVYPFSKGVCHNLY+FCC RSN+YNLEPLPSAQ+LEERSR YTCS
Sbjct: 276 LVRRRRIFYLRGIPERVYPFSKGVCHNLYDFCCHRSNIYNLEPLPSAQMLEERSRLYTCS 335

Query: 61  DMVRCRCC 69
           D++RCRCC
Sbjct: 336 DIMRCRCC 343

[Close]

BLAST of MS010647 vs. TAIR 10
Match: AT3G51390.1 (DHHC-type zinc finger family protein )

HSP 1 Score: 81.3 bits (199), Expect = 3.4e-16
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0


Query: 1   VMRGSLIIICRSVPERVYPFSKGVCHNLYEFCCDRSNVYNLEPLPSAQVLEERSRPYTCS 60
           ++R   I   R++P RV+PFS+G+  NLY  CC     YNL+ LP+A  LE+RSRPYTC 
Sbjct: 276 LVRRRRIPYMRNIPGRVHPFSRGIRRNLYNVCCGN---YNLDSLPTAFELEDRSRPYTCI 335

Query: 61  DMVRCRCC 69
           DM++CRCC
Sbjct: 336 DMLKCRCC 340

The following BLAST results are available for this feature:

BLAST of MS010647 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133117.1	2.8e-28	88.24	protein S-acyltransferase 10 [Momordica charantia]	[more]
XP_038882990.1	2.9e-25	77.94	protein S-acyltransferase 10 [Benincasa hispida]	[more]
XP_023544300.1	2.9e-25	76.47	protein S-acyltransferase 10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022977303.1	3.8e-25	76.47	protein S-acyltransferase 10-like [Cucurbita maxima]	[more]
XP_008440889.1	1.4e-24	76.47	PREDICTED: protein S-acyltransferase 10 [Cucumis melo]	[more]

BLAST of MS010647 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XA86	4.8e-15	52.94	Protein S-acyltransferase 10 OS=Arabidopsis thaliana OX=3702 GN=PAT10 PE=1 SV=1	[more]

BLAST of MS010647 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVQ2	1.3e-28	88.24	S-acyltransferase OS=Momordica charantia OX=3673 GN=LOC111005792 PE=3 SV=1	[more]
A0A6J1IPK7	1.8e-25	76.47	S-acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111477665 PE=3 SV=1	[more]
A0A1S3B260	6.9e-25	76.47	S-acyltransferase OS=Cucumis melo OX=3656 GN=LOC103485175 PE=3 SV=1	[more]
A0A0A0KMN6	2.0e-24	75.00	S-acyltransferase OS=Cucumis sativus OX=3659 GN=Csa_6G507440 PE=3 SV=1	[more]
A0A6J1GEE1	2.0e-24	75.00	S-acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111453409 PE=3 SV=1	[more]

BLAST of MS010647 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51390.1	3.4e-16	52.94	DHHC-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22883:SF307	S-ACYLTRANSFERASE	coord: 2..68
None	No IPR available	PANTHER	PTHR22883	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	coord: 2..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010647.1	MS010647.1	mRNA