MS010639 (gene) Bitter gourd (TR) v1

Overview
NameMS010639
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein At3g07870-like
Locationscaffold35: 1141608 .. 1142714 (+)
RNA-Seq ExpressionMS010639
SyntenyMS010639
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCCGCCTGATGTGATTCAGCTAATATTCTCCAAACTTCCCTTCTTCAATTTGCCCGGTTGCCGGCTCGTGTGTAAAGCATGGAACAATTTTATTTTAACTTGTAAGTTACATTCTTCGATCTCAACTTCAAACCTCTTTTATGCCCATATTTCTCCGTTTAACAAGCTCTGTTGTGTGGATTTGGATCCTAAACATTTGGGAGTGGTCAGCAGCCTTGGCTCATTTAGCTTCCATCCTGATTTGTTTTCCACTCATTTTATCTCGATCATCAATTCCTGCAATGGACTCCTCTGTTGTTCTTTTAAGCCTAAACGGACATGGGGATCTAGACCTGTTATTTGTATATTAAATCCCATGACAAATGAGTACCTCATCATTCCCATCTCCGGTAGGGATATAGATTATCGTTACGGATTAGGATTTAGTCCTAAAACAAAGCAGTACAAATTAGTTAGAAATTCCGAAGTGCCTGATAAATCCAATTCCAAATTCTCTACTTTGGTAGAGATTCTTGCATTTGGCACAAGTTCAAGTCCCGAATGGGTCCCTGTTGGCTTTGTGCCTTTTGAAGTTGATGATCATTGCGGTTACTTCAATGGAGGCCTCTATTGGGTTGCAGATGATGGAACGAATGGCATGTACCGTTTGGATATAGAAGATGAGAAAGTTGAGGAAATTTATTTTCCCAAACCTGATGGTCATTCTTATTTCTTTGGAGTCCTCGACGGTACCCTGTATTTAACTTTTTGCATCGCCATGGAATTCGAGTACCAGGTATGGAAGATGGAAGAAGATTGTTCTTGGACCAGACCATTTGTTATTTTCATACCACAAAATTTTCGTTATCCTCGCCATACTGATCATATTTATGACCATTTTGATGATGATGATATACTCCCATTTCACCTCCAACTCATCAAAGTTTGCGAGGATGGGAAGATTTTGTGTTTGGTTGCTGGATTTGATTTTATCTTGTATGACCCGAACACTGAGAGCATAGAGATATTGACGGATCAACGTATTAAAAGGCGGCAATATTTATCTGTTCATCAGATTGAGTCTCTCAATTTTGGTTCGGTCCCCAACATCTTAGCAGGTGCAGGG

mRNA sequence

CTTCCGCCTGATGTGATTCAGCTAATATTCTCCAAACTTCCCTTCTTCAATTTGCCCGGTTGCCGGCTCGTGTGTAAAGCATGGAACAATTTTATTTTAACTTGTAAGTTACATTCTTCGATCTCAACTTCAAACCTCTTTTATGCCCATATTTCTCCGTTTAACAAGCTCTGTTGTGTGGATTTGGATCCTAAACATTTGGGAGTGGTCAGCAGCCTTGGCTCATTTAGCTTCCATCCTGATTTGTTTTCCACTCATTTTATCTCGATCATCAATTCCTGCAATGGACTCCTCTGTTGTTCTTTTAAGCCTAAACGGACATGGGGATCTAGACCTGTTATTTGTATATTAAATCCCATGACAAATGAGTACCTCATCATTCCCATCTCCGGTAGGGATATAGATTATCGTTACGGATTAGGATTTAGTCCTAAAACAAAGCAGTACAAATTAGTTAGAAATTCCGAAGTGCCTGATAAATCCAATTCCAAATTCTCTACTTTGGTAGAGATTCTTGCATTTGGCACAAGTTCAAGTCCCGAATGGGTCCCTGTTGGCTTTGTGCCTTTTGAAGTTGATGATCATTGCGGTTACTTCAATGGAGGCCTCTATTGGGTTGCAGATGATGGAACGAATGGCATGTACCGTTTGGATATAGAAGATGAGAAAGTTGAGGAAATTTATTTTCCCAAACCTGATGGTCATTCTTATTTCTTTGGAGTCCTCGACGGTACCCTGTATTTAACTTTTTGCATCGCCATGGAATTCGAGTACCAGGTATGGAAGATGGAAGAAGATTGTTCTTGGACCAGACCATTTGTTATTTTCATACCACAAAATTTTCGTTATCCTCGCCATACTGATCATATTTATGACCATTTTGATGATGATGATATACTCCCATTTCACCTCCAACTCATCAAAGTTTGCGAGGATGGGAAGATTTTGTGTTTGGTTGCTGGATTTGATTTTATCTTGTATGACCCGAACACTGAGAGCATAGAGATATTGACGGATCAACGTATTAAAAGGCGGCAATATTTATCTGTTCATCAGATTGAGTCTCTCAATTTTGGTTCGGTCCCCAACATCTTAGCAGGTGCAGGG

Coding sequence (CDS)

CTTCCGCCTGATGTGATTCAGCTAATATTCTCCAAACTTCCCTTCTTCAATTTGCCCGGTTGCCGGCTCGTGTGTAAAGCATGGAACAATTTTATTTTAACTTGTAAGTTACATTCTTCGATCTCAACTTCAAACCTCTTTTATGCCCATATTTCTCCGTTTAACAAGCTCTGTTGTGTGGATTTGGATCCTAAACATTTGGGAGTGGTCAGCAGCCTTGGCTCATTTAGCTTCCATCCTGATTTGTTTTCCACTCATTTTATCTCGATCATCAATTCCTGCAATGGACTCCTCTGTTGTTCTTTTAAGCCTAAACGGACATGGGGATCTAGACCTGTTATTTGTATATTAAATCCCATGACAAATGAGTACCTCATCATTCCCATCTCCGGTAGGGATATAGATTATCGTTACGGATTAGGATTTAGTCCTAAAACAAAGCAGTACAAATTAGTTAGAAATTCCGAAGTGCCTGATAAATCCAATTCCAAATTCTCTACTTTGGTAGAGATTCTTGCATTTGGCACAAGTTCAAGTCCCGAATGGGTCCCTGTTGGCTTTGTGCCTTTTGAAGTTGATGATCATTGCGGTTACTTCAATGGAGGCCTCTATTGGGTTGCAGATGATGGAACGAATGGCATGTACCGTTTGGATATAGAAGATGAGAAAGTTGAGGAAATTTATTTTCCCAAACCTGATGGTCATTCTTATTTCTTTGGAGTCCTCGACGGTACCCTGTATTTAACTTTTTGCATCGCCATGGAATTCGAGTACCAGGTATGGAAGATGGAAGAAGATTGTTCTTGGACCAGACCATTTGTTATTTTCATACCACAAAATTTTCGTTATCCTCGCCATACTGATCATATTTATGACCATTTTGATGATGATGATATACTCCCATTTCACCTCCAACTCATCAAAGTTTGCGAGGATGGGAAGATTTTGTGTTTGGTTGCTGGATTTGATTTTATCTTGTATGACCCGAACACTGAGAGCATAGAGATATTGACGGATCAACGTATTAAAAGGCGGCAATATTTATCTGTTCATCAGATTGAGTCTCTCAATTTTGGTTCGGTCCCCAACATCTTAGCAGGTGCAGGG

Protein sequence

LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCVDLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNPMTNEYLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILAFGTSSSPEWVPVGFVPFEVDDHCGYFNGGLYWVADDGTNGMYRLDIEDEKVEEIYFPKPDGHSYFFGVLDGTLYLTFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFRYPRHTDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQRIKRRQYLSVHQIESLNFGSVPNILAGAG
Homology
BLAST of MS010639 vs. NCBI nr
Match: XP_022132431.1 (F-box protein At3g07870-like [Momordica charantia])

HSP 1 Score: 388.3 bits (996), Expect = 7.6e-104
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 60
           LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV
Sbjct: 72  LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 131

Query: 61  DLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNPM 120
           DLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNPM
Sbjct: 132 DLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNPM 191

Query: 121 TNEYLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILAFGTSSSP 180
           TNEYLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILAFGTSSSP
Sbjct: 192 TNEYLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILAFGTSSSP 251

Query: 181 EW 183
           EW
Sbjct: 252 EW 253

BLAST of MS010639 vs. NCBI nr
Match: XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])

HSP 1 Score: 361.3 bits (926), Expect = 9.9e-96
Identity = 203/385 (52.73%), Postives = 249/385 (64.68%), Query Frame = 0

Query: 1   LPPD-VIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCC 60
           LPPD +IQ+I SK+P FNLP CRLVCKAWNN +LTCK    +  S+L  A+  P   L C
Sbjct: 17  LPPDNIIQVILSKVPLFNLPSCRLVCKAWNNLVLTCKFDPPLLISSLSLAYDCPSRNLYC 76

Query: 61  VDLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGS--RPVICIL 120
           +D + K+L  +SS+ SF+FHP  F T  ISIINSCNGLL      KR  GS    V+CIL
Sbjct: 77  MDFNLKYLEGMSSVVSFTFHPKFF-TSSISIINSCNGLLSLLIS-KRKSGSPISYVLCIL 136

Query: 121 NPMTNEYLIIPIS--------GRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLV 180
           NPMTNEY   P          GR   Y YGLGFSP+TKQYK+ R S + D+S    +T V
Sbjct: 137 NPMTNEYFKFPAEKSKTHCCCGR--PYSYGLGFSPETKQYKIARTSFLRDES----TTSV 196

Query: 181 EILAFGTSSSPEWVPVGFVP-FEVDDHCGYFNGGLYWVAD-----DGTNGMYRLDIEDEK 240
           EI AFGT+   EW PVG +P   V+DH  YFNGGLYW  D     D  N +YRLDIE+EK
Sbjct: 197 EIFAFGTTR--EWTPVGVLPSLVVEDHGVYFNGGLYWTVDELQPRDSNNAIYRLDIENEK 256

Query: 241 VEEIYFPKPDGHSYFFGVLDGTLYL-TFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFR 300
           +E+I  P   G  +FFGV DGTLYL T+   ++  YQVWKMEE+ SW + FV+  P+N R
Sbjct: 257 LEKISCPHYGGGHFFFGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIKAFVLSRPENLR 316

Query: 301 YPRHTDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQRI 360
           +P H         D       LQ IKVCEDGKILCL+AGF  ILYDP T+ ++ILT+Q +
Sbjct: 317 HPEH---------DQPWGVSQLQPIKVCEDGKILCLLAGFLLILYDPKTKRVKILTNQDV 376

Query: 361 KRRQYLSVHQIESLNFGSVPNILAG 368
           +  ++L VHQI+S NF S+PNILAG
Sbjct: 377 ETERHLHVHQIDSSNFNSLPNILAG 382

BLAST of MS010639 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 356.7 bits (914), Expect = 2.4e-94
Identity = 196/387 (50.65%), Postives = 252/387 (65.12%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPF--NKLC 60
           LPPD++QLIFSKLPFFNLP CRLV   WNN +L+CK   SIS SNLF+AH        L 
Sbjct: 16  LPPDILQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSISISNLFFAHFYSCRDRNLH 75

Query: 61  CVDLDPKHLGVVSSLGSFSFHPDLFS-THFISIINSCNGLLCCSFKPKRTWGSRP-VICI 120
           CVDLDP+HL  +S++ SF+FHP++ S +  ISIINSC+GL+      +R  G RP V+C+
Sbjct: 76  CVDLDPQHLEGMSTVASFTFHPNVSSGSCKISIINSCSGLISLLITKRRRRGHRPGVVCV 135

Query: 121 LNPMTNEYLIIPI---SGRDI-DYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEIL 180
           LNPMTNEY  +P     G  + DY YGLGFSP+TKQYKL R   V  +       +VEI 
Sbjct: 136 LNPMTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYVCHE------FIVEIF 195

Query: 181 AFGTSSSPEWVPVGFVPFEVDDHCG-YFNGGLYWVADDG------TNGMYRLDIEDEKVE 240
           AFGTS   EW PVG VP+ ++++ G YFNGGLYWV          ++ +YRLD+ED+K +
Sbjct: 196 AFGTSC--EWTPVGSVPYFLNEYHGVYFNGGLYWVGGQQLPNAGLSDVIYRLDLEDDKFK 255

Query: 241 EIYFP---KPDGHSYFFGVLDGTLYLTFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFR 300
           +I FP     +G   + GV + TLYLT C   +FEY VWKMEED SW + FV+ +P+N  
Sbjct: 256 QISFPLDGDDEGDFPYIGVYNDTLYLTLCCG-DFEYHVWKMEEDFSWIKEFVLALPENVH 315

Query: 301 Y--PRHTDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQ 360
           +  PRH             + + LQLIK CEDG ILCL AG   ILYDP TE+ E+LTDQ
Sbjct: 316 HSLPRHHP-----------IGYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQ 375

Query: 361 RIKRRQYLSVHQIESLNFGSVPNILAG 368
             + ++++ V+QI+S NF S+ NILAG
Sbjct: 376 DFEIKKHMWVYQIDSFNFNSLHNILAG 382

BLAST of MS010639 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 1.1e-89
Identity = 189/385 (49.09%), Postives = 245/385 (63.64%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYA--HISPFNKLC 60
           LPPDV+QLIFSKLPFFNLP CRLV   WNN I +CK   SIS S+LF+A  + S    L 
Sbjct: 16  LPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLH 75

Query: 61  CVDLDPKHLGVVSSLGSFSFHPDLFS-THFISIINSCNGLLCCSFKPKRTWGSR-PVICI 120
           CV+ DP+H   +S++ SF+FHPDL S +  I+IINSC+GL+      +R  G R  ++C+
Sbjct: 76  CVEFDPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCV 135

Query: 121 LNPMTNEYLIIPIS----GRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEIL 180
           LNP+TNEY  +P S     R  +Y YGLGFSP T QYKL R     D+       +V+I 
Sbjct: 136 LNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDE------FIVDIF 195

Query: 181 AFGTSSSPEWVPVGFVPFEVDDHCG-YFNGGLYWVA---------DDGTNGMYRLDIEDE 240
           AFGTS   EW PVG VP  ++++ G Y NGGLYWV           D T  +YRLD++DE
Sbjct: 196 AFGTSC--EWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDE 255

Query: 241 KVEEIYFPKPDGHSYFFGVLDGTLYLTFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFR 300
           K E+I FP   G   +  V +GTLYLTFC   +F+Y  WKMEED SW++ FV+ +P+N  
Sbjct: 256 KFEKISFPLDGGDDPYIAVYNGTLYLTFC-CEDFDYHAWKMEEDFSWSKEFVLALPEN-- 315

Query: 301 YPRHTDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQRI 360
                 H   H      + ++LQLIK CEDG ILCL AG   ILYDP+T+++EILT+Q  
Sbjct: 316 ----VHHSLRHHP----IGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDF 375

Query: 361 KRRQYLSVHQIESLNFGSVPNILAG 368
           + ++ + VHQIES +F S+ NILAG
Sbjct: 376 EIKEAMWVHQIESFSFNSLHNILAG 381

BLAST of MS010639 vs. NCBI nr
Match: XP_004134745.1 (F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g07870 [Cucumis sativus] >XP_031743637.1 F-box protein At3g07870 [Cucumis sativus] >KGN49139.1 hypothetical protein Csa_003023 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 1.8e-89
Identity = 190/382 (49.74%), Postives = 242/382 (63.35%), Query Frame = 0

Query: 2   PPD-VIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 61
           PPD +IQ+I SK+P FNL  CRLVCK+WNN ILTCK   S+  S   +A+  P   L CV
Sbjct: 18  PPDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLFLS---FAYDCPSRTLYCV 77

Query: 62  DLDPKHLGVVSSLGSFSFHPDLFST--HFISIINSCNGLLCCSFKPKRTWGSRPVICILN 121
           D DP +   ++S+GSF+FHP  FST    ISIIN+CNGLL      ++      V+ ILN
Sbjct: 78  DFDPMYFEGMNSIGSFTFHPK-FSTSDSSISIINACNGLLSLLISKRKLGSVSYVLGILN 137

Query: 122 PMTNEYLIIPISGRDID------YRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEIL 181
           PMTNEY   P             Y YGLGF+PKTKQYK+ R S  PD+S    +TLVEI 
Sbjct: 138 PMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDES----TTLVEIF 197

Query: 182 AFGTSSSPEWVPVGFVP-FEVDDHCGYFNGGLYWVA------DDGTNGMYRLDIEDEKVE 241
            FG S+   W PVGF+P   V+DH  YF GGLYWVA      D   + +YRLD+E+EK+E
Sbjct: 198 TFG-STHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSISAIYRLDLENEKLE 257

Query: 242 EIYFPKPDGHSYFFGVLDGTLYLTFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFRYPR 301
           +I  P+  G  +FFGV DGTLYLT  ++   +YQVWKM+++ SW + FVI  P+N  +P 
Sbjct: 258 KISCPQYIGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISRPRNLCHP- 317

Query: 302 HTDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQRIKRR 361
             DH +  +    + P     IK CEDGKILCL+AG   ILYDP T+S EILTDQ +K  
Sbjct: 318 --DHPHQPWGVSQLDP-----IKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVE 377

Query: 362 QYLSVHQIESLNFGSVPNILAG 368
           ++L VH I++ NF S+P+ILAG
Sbjct: 378 KHLHVHHIDAFNFNSLPSILAG 380

BLAST of MS010639 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.3e-09
Identity = 68/262 (25.95%), Postives = 107/262 (40.84%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSN-----LFYAHISPFN 60
           LP D+I  IFS+LP  ++     VC++W + +      SS S+S      L +      N
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRN 87

Query: 61  KLCCVDLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVIC 120
            L  +DL  +   + +   +  F     S     ++ SCNGLLC S            + 
Sbjct: 88  GLHFLDLSEEEKRIKTKKFTLRF---ASSMPEFDVVGSCNGLLCLSDSL-----YNDSLY 147

Query: 121 ILNPMTNEYLIIPISG---RDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSK-------- 180
           + NP T   L +P       D +  +G GF   TK+YK+++       S++         
Sbjct: 148 LYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRG 207

Query: 181 ----FSTLVEILAFG---TSSSPEWVPVGFVPFEVDDHC--GYFNGGLYWVADDGTNGMY 234
                 + V+IL      T  S  W  +G  P++          NG L++V     +   
Sbjct: 208 RIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPD 267

BLAST of MS010639 vs. ExPASy Swiss-Prot
Match: Q9SI34 (Putative F-box only protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBX9 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.8e-05
Identity = 58/247 (23.48%), Postives = 101/247 (40.89%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFN--KLC 60
           LPPD+++ I S++P  +L   R  CK WN+     +            +H+  +    +C
Sbjct: 4   LPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDYTVC 63

Query: 61  CVDLDPKHLGVVSSLGSFSFHPDLFSTH------FISIINSCNGLLCCSFKPKRTWGSRP 120
            + +   +L    S   F     L  +H      +I+ +  C+GLL C+ K  R      
Sbjct: 64  PMSI---NLNFSGSSIEFKSVLSLKDSHYNSEQVYIAKVFHCDGLLLCTTKDHR------ 123

Query: 121 VICILNPMTNEYLIIPISGRDIDY-RYGLGF--SPKTKQYKLVR---NSEVPDKSNSKFS 180
            + + NP   E   I        Y R+ LG+  +   + YK++R   +   P+    +++
Sbjct: 124 -LLVWNPCLGETRWINFENDYKPYSRFSLGYKNNKSCRSYKILRFWTSYLTPNHIGLRYN 183

Query: 181 TLVEILAFGTSSSPEWV-PVGFVPFEVDDHCGY-FNGGLYWVA-DDGTNGMYRLDIEDEK 231
               I  F T S    +  V    F ++   G  F G  YW+A D+ TN +   D   E+
Sbjct: 184 ----IYEFTTDSWRVLIDKVSLNYFLIESENGVSFKGNTYWLALDEETNFLLGFDFTMER 236

BLAST of MS010639 vs. ExPASy Swiss-Prot
Match: Q9LID1 (F-box/kelch-repeat protein At3g13680 OS=Arabidopsis thaliana OX=3702 GN=At3g13680 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 53/234 (22.65%), Postives = 100/234 (42.74%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILT--CKLHSSISTSNLFYAHISPFNKLC 60
           LP D+++ I S++P  +L   R  C+ WN+   +  C    + +  N F   +   +++C
Sbjct: 7   LPGDLVEEILSRVPLTSLRAIRSTCQKWNSLSKSQICG-RKATAAENKFLGFMMKDSRVC 66

Query: 61  CVDLDPKHLGVVSSLGSFSFHPDL-----FSTHFISIINSCNGLLCCSFKPKRTWGSRPV 120
            +  D +  G+ +  G     P +          +S +  C+GL+ C  K          
Sbjct: 67  SMKFDLQ--GIRNDDGEL-VEPSIKQVSKLDQIEVSQVFHCDGLVLCIIK------DNTG 126

Query: 121 ICILNPMTNE-YLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEIL 180
           + + NP   +   I P +   I+ RY LG+    + +K++R  ++   SN  F    E+ 
Sbjct: 127 LLVWNPYLGQTRWIHPRNNYQIEDRYALGYD-NNRNHKILRIFDLYPSSNRVFG--YEVY 186

Query: 181 AFGTSSSPEWVPVGFVP-FEVDDHC--GYFNGGLYWVAD--DGTNGMYRLDIED 222
            F   SS  W  +  +P +++  H       G  Y+ A   +   G+  ++IED
Sbjct: 187 DF---SSNSWKVLDVIPEWDIQSHFRGASLKGNAYFPAQKKETVGGIKTINIED 224

BLAST of MS010639 vs. ExPASy Swiss-Prot
Match: Q9SLH9 (F-box protein At1g54550 OS=Arabidopsis thaliana OX=3702 GN=At1g54550 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 38/158 (24.05%), Postives = 68/158 (43.04%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 60
           LP D+++ IFS++P  +L   R  CK WN       L    +  N F   +   +++C +
Sbjct: 7   LPDDLVREIFSRVPLTSLRAVRSTCKKWNAISKYDILGKKAAAKNQFLEFMVTDSRVCSL 66

Query: 61  DLDPKHLGVVSSLGSFSFH----PDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICI 120
            LD + +     L   S      P+      IS +  C+GLL C  K   +      + +
Sbjct: 67  RLDLQGIRSEEDLIDLSIKQISIPNKVDQVEISQVYHCDGLLLCIAKDNSS------VMV 126

Query: 121 LNPMTNEYLIIPISGRDIDY-RYGLGFSPKTKQYKLVR 154
            NP   +  +I    +   Y ++ LG+    + +K++R
Sbjct: 127 WNPYLGQTKLIQPRKKLHRYDKFALGYD-NNRNHKILR 157

BLAST of MS010639 vs. ExPASy TrEMBL
Match: A0A6J1BS93 (F-box protein At3g07870-like OS=Momordica charantia OX=3673 GN=LOC111005288 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 3.7e-104
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 60
           LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV
Sbjct: 72  LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 131

Query: 61  DLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNPM 120
           DLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNPM
Sbjct: 132 DLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNPM 191

Query: 121 TNEYLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILAFGTSSSP 180
           TNEYLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILAFGTSSSP
Sbjct: 192 TNEYLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILAFGTSSSP 251

Query: 181 EW 183
           EW
Sbjct: 252 EW 253

BLAST of MS010639 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 5.1e-90
Identity = 189/385 (49.09%), Postives = 245/385 (63.64%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYA--HISPFNKLC 60
           LPPDV+QLIFSKLPFFNLP CRLV   WNN I +CK   SIS S+LF+A  + S    L 
Sbjct: 16  LPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISHLFFARFYSSRHPNLH 75

Query: 61  CVDLDPKHLGVVSSLGSFSFHPDLFS-THFISIINSCNGLLCCSFKPKRTWGSR-PVICI 120
           CV+ DP+H   +S++ SF+FHPDL S +  I+IINSC+GL+      +R  G R  ++C+
Sbjct: 76  CVEFDPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLIINKRRRRGHRLDLVCV 135

Query: 121 LNPMTNEYLIIPIS----GRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEIL 180
           LNP+TNEY  +P S     R  +Y YGLGFSP T QYKL R     D+       +V+I 
Sbjct: 136 LNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFTHDE------FIVDIF 195

Query: 181 AFGTSSSPEWVPVGFVPFEVDDHCG-YFNGGLYWVA---------DDGTNGMYRLDIEDE 240
           AFGTS   EW PVG VP  ++++ G Y NGGLYWV           D T  +YRLD++DE
Sbjct: 196 AFGTSC--EWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIYRLDLKDE 255

Query: 241 KVEEIYFPKPDGHSYFFGVLDGTLYLTFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFR 300
           K E+I FP   G   +  V +GTLYLTFC   +F+Y  WKMEED SW++ FV+ +P+N  
Sbjct: 256 KFEKISFPLDGGDDPYIAVYNGTLYLTFC-CEDFDYHAWKMEEDFSWSKEFVLALPEN-- 315

Query: 301 YPRHTDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQRI 360
                 H   H      + ++LQLIK CEDG ILCL AG   ILYDP+T+++EILT+Q  
Sbjct: 316 ----VHHSLRHHP----IGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDF 375

Query: 361 KRRQYLSVHQIESLNFGSVPNILAG 368
           + ++ + VHQIES +F S+ NILAG
Sbjct: 376 EIKEAMWVHQIESFSFNSLHNILAG 381

BLAST of MS010639 vs. ExPASy TrEMBL
Match: A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 8.8e-90
Identity = 190/382 (49.74%), Postives = 242/382 (63.35%), Query Frame = 0

Query: 2   PPD-VIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 61
           PPD +IQ+I SK+P FNL  CRLVCK+WNN ILTCK   S+  S   +A+  P   L CV
Sbjct: 18  PPDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLFLS---FAYDCPSRTLYCV 77

Query: 62  DLDPKHLGVVSSLGSFSFHPDLFST--HFISIINSCNGLLCCSFKPKRTWGSRPVICILN 121
           D DP +   ++S+GSF+FHP  FST    ISIIN+CNGLL      ++      V+ ILN
Sbjct: 78  DFDPMYFEGMNSIGSFTFHPK-FSTSDSSISIINACNGLLSLLISKRKLGSVSYVLGILN 137

Query: 122 PMTNEYLIIPISGRDID------YRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEIL 181
           PMTNEY   P             Y YGLGF+PKTKQYK+ R S  PD+S    +TLVEI 
Sbjct: 138 PMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDES----TTLVEIF 197

Query: 182 AFGTSSSPEWVPVGFVP-FEVDDHCGYFNGGLYWVA------DDGTNGMYRLDIEDEKVE 241
            FG S+   W PVGF+P   V+DH  YF GGLYWVA      D   + +YRLD+E+EK+E
Sbjct: 198 TFG-STHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSSISAIYRLDLENEKLE 257

Query: 242 EIYFPKPDGHSYFFGVLDGTLYLTFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFRYPR 301
           +I  P+  G  +FFGV DGTLYLT  ++   +YQVWKM+++ SW + FVI  P+N  +P 
Sbjct: 258 KISCPQYIGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISRPRNLCHP- 317

Query: 302 HTDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQRIKRR 361
             DH +  +    + P     IK CEDGKILCL+AG   ILYDP T+S EILTDQ +K  
Sbjct: 318 --DHPHQPWGVSQLDP-----IKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVE 377

Query: 362 QYLSVHQIESLNFGSVPNILAG 368
           ++L VH I++ NF S+P+ILAG
Sbjct: 378 KHLHVHHIDAFNFNSLPSILAG 380

BLAST of MS010639 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 3.3e-89
Identity = 190/381 (49.87%), Postives = 239/381 (62.73%), Query Frame = 0

Query: 2   PPD-VIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 61
           PPD +IQ+I SK+P FNL  CRLVCK+WNN +LTCK   S+  S    A+  P   L CV
Sbjct: 18  PPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSLFIS---LAYDCPSRTLYCV 77

Query: 62  DLDPKHLGVVSSLGSFSFHPDL-FSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNP 121
           D DP +   ++S+GSFSFHP    S+  ISIIN+CNGLL      ++      V+ ILNP
Sbjct: 78  DFDPMYSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLGILNP 137

Query: 122 MTNEYLIIPISGRDID------YRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILA 181
           MTNEY   P             Y YGLGF+PK KQYK+ R S  PD+S    +TLVEI A
Sbjct: 138 MTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDES----TTLVEIFA 197

Query: 182 FGTSSSPEWVPVGFVP-FEVDDHCGYFNGGLYWVA------DDGTNGMYRLDIEDEKVEE 241
           FG S+   W  VGF+P   V+DH  YFNGGLYWVA      D   + +YRLDIE+E +E+
Sbjct: 198 FG-STYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLEK 257

Query: 242 IYFPKPDGHSYFFGVLDGTLYLTFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFRYPRH 301
           I  P+  G  +FFGV DGTLYLT  ++   +YQVWKM+++ SW + FVI  P+N  +P  
Sbjct: 258 ISCPQHLGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISSPRNLCHP-- 317

Query: 302 TDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQRIKRRQ 361
            DH +  +    + P     IK CEDGKILCL+AG   ILYDP T+S EILTDQ +K  +
Sbjct: 318 -DHPHQPWGVSQLDP-----IKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEK 377

Query: 362 YLSVHQIESLNFGSVPNILAG 368
           +L VH I+S NF S+PNILAG
Sbjct: 378 HLHVHHIDSFNFNSLPNILAG 380

BLAST of MS010639 vs. ExPASy TrEMBL
Match: A0A1S3B0Q6 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103484583 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 7.4e-89
Identity = 190/381 (49.87%), Postives = 238/381 (62.47%), Query Frame = 0

Query: 2   PPD-VIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 61
           PPD +IQ+I SK+P FNL  CRLVCK+WNN +LTCK   S+  S    A+  P   L CV
Sbjct: 18  PPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSLFIS---LAYDCPSRTLYCV 77

Query: 62  DLDPKHLGVVSSLGSFSFHPDL-FSTHFISIINSCNGLLCCSFKPKRTWGSRPVICILNP 121
           D DP +   ++S+GSFSFHP    S+  ISIIN+CNGLL      ++      V+ ILNP
Sbjct: 78  DFDPMYSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSLLISKRKPGSVSYVLGILNP 137

Query: 122 MTNEYLIIPISGRDID------YRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEILA 181
           MTNEY   P             Y YGLGF+PK KQYK+ R S  PD+S    +TLVEI A
Sbjct: 138 MTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDES----TTLVEIFA 197

Query: 182 FGTSSSPEWVPVGFVP-FEVDDHCGYFNGGLYWVA------DDGTNGMYRLDIEDEKVEE 241
           FG S    W  VGF+P   V+DH  YFNGGLYWVA      D   + +YRLDIE+E +E+
Sbjct: 198 FG-SIYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSSISTIYRLDIENENLEK 257

Query: 242 IYFPKPDGHSYFFGVLDGTLYLTFCIAMEFEYQVWKMEEDCSWTRPFVIFIPQNFRYPRH 301
           I  P+  G  +FFGV DGTLYLT  ++   +YQVWKM+++ SW + FVI  P+N  +P  
Sbjct: 258 ISCPQHLGGHFFFGVFDGTLYLT--VSKNNKYQVWKMKDNFSWIKAFVISSPRNLCHP-- 317

Query: 302 TDHIYDHFDDDDILPFHLQLIKVCEDGKILCLVAGFDFILYDPNTESIEILTDQRIKRRQ 361
            DH +  +    + P     IK CEDGKILCL+AG   ILYDP T+S EILTDQ +K  +
Sbjct: 318 -DHPHQPWGVSQLDP-----IKACEDGKILCLLAGLHLILYDPKTKSAEILTDQSVKVEK 377

Query: 362 YLSVHQIESLNFGSVPNILAG 368
           +L VH I+S NF S+PNILAG
Sbjct: 378 HLHVHHIDSFNFNSLPNILAG 380

BLAST of MS010639 vs. TAIR 10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 64.3 bits (155), Expect = 2.3e-10
Identity = 68/262 (25.95%), Postives = 107/262 (40.84%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSN-----LFYAHISPFN 60
           LP D+I  IFS+LP  ++     VC++W + +      SS S+S      L +      N
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRN 87

Query: 61  KLCCVDLDPKHLGVVSSLGSFSFHPDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVIC 120
            L  +DL  +   + +   +  F     S     ++ SCNGLLC S            + 
Sbjct: 88  GLHFLDLSEEEKRIKTKKFTLRF---ASSMPEFDVVGSCNGLLCLSDSL-----YNDSLY 147

Query: 121 ILNPMTNEYLIIPISG---RDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSK-------- 180
           + NP T   L +P       D +  +G GF   TK+YK+++       S++         
Sbjct: 148 LYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRG 207

Query: 181 ----FSTLVEILAFG---TSSSPEWVPVGFVPFEVDDHC--GYFNGGLYWVADDGTNGMY 234
                 + V+IL      T  S  W  +G  P++          NG L++V     +   
Sbjct: 208 RIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFVTRPRRHVPD 267

BLAST of MS010639 vs. TAIR 10
Match: AT2G04920.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.7e-06
Identity = 58/247 (23.48%), Postives = 101/247 (40.89%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFN--KLC 60
           LPPD+++ I S++P  +L   R  CK WN+     +            +H+  +    +C
Sbjct: 4   LPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDYTVC 63

Query: 61  CVDLDPKHLGVVSSLGSFSFHPDLFSTH------FISIINSCNGLLCCSFKPKRTWGSRP 120
            + +   +L    S   F     L  +H      +I+ +  C+GLL C+ K  R      
Sbjct: 64  PMSI---NLNFSGSSIEFKSVLSLKDSHYNSEQVYIAKVFHCDGLLLCTTKDHR------ 123

Query: 121 VICILNPMTNEYLIIPISGRDIDY-RYGLGF--SPKTKQYKLVR---NSEVPDKSNSKFS 180
            + + NP   E   I        Y R+ LG+  +   + YK++R   +   P+    +++
Sbjct: 124 -LLVWNPCLGETRWINFENDYKPYSRFSLGYKNNKSCRSYKILRFWTSYLTPNHIGLRYN 183

Query: 181 TLVEILAFGTSSSPEWV-PVGFVPFEVDDHCGY-FNGGLYWVA-DDGTNGMYRLDIEDEK 231
               I  F T S    +  V    F ++   G  F G  YW+A D+ TN +   D   E+
Sbjct: 184 ----IYEFTTDSWRVLIDKVSLNYFLIESENGVSFKGNTYWLALDEETNFLLGFDFTMER 236

BLAST of MS010639 vs. TAIR 10
Match: AT5G41510.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.7e-06
Identity = 75/300 (25.00%), Postives = 115/300 (38.33%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISP-FNKLCC 60
           LP D+I+ IFS++P  ++   RL CK+WNN      L  S S + +     +    K   
Sbjct: 8   LPRDLIEEIFSRVPLTSMKAVRLTCKSWNN------LSKSESFTKVHIGRAATREEKTMI 67

Query: 61  VDLDPKHLGVVSSL-----------GSFSFHPDLFSTHFISIINSCNGLLCCSFK-PKRT 120
           VD+ P  L ++S +           G FS    L   + I+ +    GLL C  K P R 
Sbjct: 68  VDVMPHKLNLMSIVIDDVTPSAEFKGQFSL---LHKNYRINQVLHYEGLLLCIMKDPTR- 127

Query: 121 WGSRPVICILNPMTNEYLIIPI----SGRDID-YRYGLGFSPK--TKQYKLVRNSEVPDK 180
                 I + NP   +   I +        ID +RY LG++ K      K +R  +   K
Sbjct: 128 ------IVVWNPYLGQTRWIQLRYFHRPHGIDHFRYALGYADKESCSSLKFLRFLDYFYK 187

Query: 181 SNSKFSTLVEILAFGT------SSSPEWVPVGFVPFEVDDHCGYFNGGLYWVADD-GTNG 240
           +  +     EI  F +      + +P W      P      C    G  YW A +  T G
Sbjct: 188 APEEEFFWYEIYDFDSGLWTTLNVTPHWGIYSTCP------CVSLKGNTYWPAKERSTQG 247

Query: 241 ----MYRLDIEDEKVEEIYFPKPDGHSYFFG---VLDGTLYLTFCIAM-----EFEYQVW 262
               + R D   E+   +     D  S F     V +  L   F   +     E+E+++W
Sbjct: 248 FQDYIIRFDFTRERFGPLLALPTDRESSFVSLSCVKEEKLAALFKHRLHHDSYEYEFEIW 285

BLAST of MS010639 vs. TAIR 10
Match: AT3G13680.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 49.3 bits (116), Expect = 7.8e-06
Identity = 53/234 (22.65%), Postives = 100/234 (42.74%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILT--CKLHSSISTSNLFYAHISPFNKLC 60
           LP D+++ I S++P  +L   R  C+ WN+   +  C    + +  N F   +   +++C
Sbjct: 7   LPGDLVEEILSRVPLTSLRAIRSTCQKWNSLSKSQICG-RKATAAENKFLGFMMKDSRVC 66

Query: 61  CVDLDPKHLGVVSSLGSFSFHPDL-----FSTHFISIINSCNGLLCCSFKPKRTWGSRPV 120
            +  D +  G+ +  G     P +          +S +  C+GL+ C  K          
Sbjct: 67  SMKFDLQ--GIRNDDGEL-VEPSIKQVSKLDQIEVSQVFHCDGLVLCIIK------DNTG 126

Query: 121 ICILNPMTNE-YLIIPISGRDIDYRYGLGFSPKTKQYKLVRNSEVPDKSNSKFSTLVEIL 180
           + + NP   +   I P +   I+ RY LG+    + +K++R  ++   SN  F    E+ 
Sbjct: 127 LLVWNPYLGQTRWIHPRNNYQIEDRYALGYD-NNRNHKILRIFDLYPSSNRVFG--YEVY 186

Query: 181 AFGTSSSPEWVPVGFVP-FEVDDHC--GYFNGGLYWVAD--DGTNGMYRLDIED 222
            F   SS  W  +  +P +++  H       G  Y+ A   +   G+  ++IED
Sbjct: 187 DF---SSNSWKVLDVIPEWDIQSHFRGASLKGNAYFPAQKKETVGGIKTINIED 224

BLAST of MS010639 vs. TAIR 10
Match: AT1G54550.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-05
Identity = 38/158 (24.05%), Postives = 68/158 (43.04%), Query Frame = 0

Query: 1   LPPDVIQLIFSKLPFFNLPGCRLVCKAWNNFILTCKLHSSISTSNLFYAHISPFNKLCCV 60
           LP D+++ IFS++P  +L   R  CK WN       L    +  N F   +   +++C +
Sbjct: 7   LPDDLVREIFSRVPLTSLRAVRSTCKKWNAISKYDILGKKAAAKNQFLEFMVTDSRVCSL 66

Query: 61  DLDPKHLGVVSSLGSFSFH----PDLFSTHFISIINSCNGLLCCSFKPKRTWGSRPVICI 120
            LD + +     L   S      P+      IS +  C+GLL C  K   +      + +
Sbjct: 67  RLDLQGIRSEEDLIDLSIKQISIPNKVDQVEISQVYHCDGLLLCIAKDNSS------VMV 126

Query: 121 LNPMTNEYLIIPISGRDIDY-RYGLGFSPKTKQYKLVR 154
            NP   +  +I    +   Y ++ LG+    + +K++R
Sbjct: 127 WNPYLGQTKLIQPRKKLHRYDKFALGYD-NNRNHKILR 157

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022132431.17.6e-104100.00F-box protein At3g07870-like [Momordica charantia][more]
XP_038883771.19.9e-9652.73putative F-box protein At1g60370 [Benincasa hispida][more]
XP_038880514.12.4e-9450.65putative F-box protein At1g46984 [Benincasa hispida][more]
XP_004135796.11.1e-8949.09putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
XP_004134745.11.8e-8949.74F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g0787... [more]
Match NameE-valueIdentityDescription
Q9SFC73.3e-0925.95F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1[more]
Q9SI343.8e-0523.48Putative F-box only protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBX9 PE=4 SV=1[more]
Q9LID11.1e-0422.65F-box/kelch-repeat protein At3g13680 OS=Arabidopsis thaliana OX=3702 GN=At3g1368... [more]
Q9SLH92.4e-0424.05F-box protein At1g54550 OS=Arabidopsis thaliana OX=3702 GN=At1g54550 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1BS933.7e-104100.00F-box protein At3g07870-like OS=Momordica charantia OX=3673 GN=LOC111005288 PE=4... [more]
A0A0A0M1M55.1e-9049.09F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A0A0KJY98.8e-9049.74F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ... [more]
A0A5D3CM943.3e-8949.87Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
A0A1S3B0Q67.4e-8949.87putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103484583 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT3G07870.12.3e-1025.95F-box and associated interaction domains-containing protein [more]
AT2G04920.12.7e-0623.48F-box and associated interaction domains-containing protein [more]
AT5G41510.12.7e-0625.00F-box and associated interaction domains-containing protein [more]
AT3G13680.17.8e-0622.65F-box and associated interaction domains-containing protein [more]
AT1G54550.11.7e-0524.05F-box and associated interaction domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 1..41
e-value: 7.9E-7
score: 38.7
IPR001810F-box domainPFAMPF00646F-boxcoord: 1..42
e-value: 2.0E-9
score: 37.0
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..51
score: 9.285514
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 92..280
e-value: 1.4E-14
score: 52.0
NoneNo IPR availableGENE3D1.20.1280.50coord: 1..37
e-value: 6.6E-6
score: 27.9
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 6..290
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 6..290
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 90..264
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 1..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS010639.1MS010639.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding