MS010633 (gene) Bitter gourd (TR) v1

Overview


Name	MS010633
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold35: 1106494 .. 1107094 (-)
RNA-Seq Expression	MS010633
Synteny	MS010633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATCGTCATATAGCAACCAAGAGCAATCTTGTCGATTCAAGTCCTGAAACAAACAACAACGTTAACTGTCTCCCTCTCTGCCCCAAGCCTCGTCGTCCTAGACCCACCATCCCCAATTTCCTCGTCCCTCTCAGATGCGCTGATCGCATCCACAGGTCACTTTCTCATCTTACTCTTCTCCAACTTAGTTTTATTACGTATGGAAAAGTTTATGGAAAATTTTGAGAGATTTTCAAAATCTTATTTAATTTGTTCTCTTACTTTAACCAGCCAATCGAGTGGCGAAGGAAGAAATGGGATTCTGAATATCATTGCTGGAAAGGTAAGAAACGGATTACCTTTCTAGAAAATGGATTTCCTTCCCATGATTGGGAATTATTTTGAAAAATCCATGAATATGTGTTGTGTGCAGAATGTTGAAGGGAGAGATTGCTTGTGCTCCAATTGCTACCCATCGTGTTATTCGGGTTCGCCTCCACGAAGAACAGAGAATCCGCTCGTTCACGACGTGTATTTCCTTCATCAAATGGAGCTTCTTTCACCATTTTCGCACACCAAGCTCTCGGAGAAGTTCAGCTTGACCTCTGCCTCTCCCACA

mRNA sequence

ATGCATCGTCATATAGCAACCAAGAGCAATCTTGTCGATTCAAGTCCTGAAACAAACAACAACGTTAACTGTCTCCCTCTCTGCCCCAAGCCTCGTCGTCCTAGACCCACCATCCCCAATTTCCTCGTCCCTCTCAGATGCGCTGATCGCATCCACAGGTCACTTTCTCATCTTACTCTTCTCCAACTTAGTTTTATTACGTATGGAAAAAATGTTGAAGGGAGAGATTGCTTGTGCTCCAATTGCTACCCATCGTGTTATTCGGGTTCGCCTCCACGAAGAACAGAGAATCCGCTCGTTCACGACGTGTATTTCCTTCATCAAATGGAGCTTCTTTCACCATTTTCGCACACCAAGCTCTCGGAGAAGTTCAGCTTGACCTCTGCCTCTCCCACA

Coding sequence (CDS)

ATGCATCGTCATATAGCAACCAAGAGCAATCTTGTCGATTCAAGTCCTGAAACAAACAACAACGTTAACTGTCTCCCTCTCTGCCCCAAGCCTCGTCGTCCTAGACCCACCATCCCCAATTTCCTCGTCCCTCTCAGATGCGCTGATCGCATCCACAGGTCACTTTCTCATCTTACTCTTCTCCAACTTAGTTTTATTACGTATGGAAAAAATGTTGAAGGGAGAGATTGCTTGTGCTCCAATTGCTACCCATCGTGTTATTCGGGTTCGCCTCCACGAAGAACAGAGAATCCGCTCGTTCACGACGTGTATTTCCTTCATCAAATGGAGCTTCTTTCACCATTTTCGCACACCAAGCTCTCGGAGAAGTTCAGCTTGACCTCTGCCTCTCCCACA

Protein sequence

MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLSHLTLLQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTKLSEKFSLTSASPT

Homology

[Close]

BLAST of MS010633 vs. NCBI nr
Match: XP_022133306.1 (uncharacterized protein LOC111005918 [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 8.2e-61
Identity = 118/132 (89.39%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLSHLTL 60
           MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIH   S    
Sbjct: 2   MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHSQSSGEGR 61

Query: 61  LQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTKL 120
             +  I  GKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTKL
Sbjct: 62  NGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTKL 121

Query: 121 SEKFSLTSASPT 133
           SEKFSLTSASPT
Sbjct: 122 SEKFSLTSASPT 133

[Close]

BLAST of MS010633 vs. NCBI nr
Match: XP_038881848.1 (uncharacterized protein LOC120073212 [Benincasa hispida])

HSP 1 Score: 179.1 bits (453), Expect = 2.5e-41
Identity = 91/133 (68.42%), Postives = 100/133 (75.19%), Query Frame = 0


Query: 4   HIATKSNLVDSSPETN----NNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLSHLT 63
           HIATKSNLVDS  +T+     + N LPLCPKPRR  P IP+FL PL CA  +H   S  T
Sbjct: 50  HIATKSNLVDSGLQTDQLGFKDNNSLPLCPKPRRLEPVIPSFLAPLGCAHHVHSQSSGDT 109

Query: 64  LLQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTK 123
              +  I  GK+VEGRDCLCS CYPSCYSGSPP RTENPLVHDVYFLHQME+ SPFS T 
Sbjct: 110 RSGILNIIAGKHVEGRDCLCSGCYPSCYSGSPPGRTENPLVHDVYFLHQMEIHSPFSRTN 169

Query: 124 LSEKFSLTSASPT 133
           LS+KFSLTSASPT
Sbjct: 170 LSDKFSLTSASPT 182

[Close]

BLAST of MS010633 vs. NCBI nr
Match: KAA0025640.1 (hypothetical protein E6C27_scaffold253G001330 [Cucumis melo var. makuwa] >TYK12513.1 hypothetical protein E5676_scaffold255G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 175.3 bits (443), Expect = 3.6e-40
Identity = 92/136 (67.65%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   MHRHIATKSNLVDSSPETN----NNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLS 60
           MH HIATKSNLVDS  ETN     + N LPLCPKPRR  P IP+FLVPLRCA  IH   S
Sbjct: 1   MH-HIATKSNLVDSDLETNQPGFKDNNGLPLCPKPRRLEPAIPSFLVPLRCAHHIHSQSS 60

Query: 61  HLTLLQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFS 120
             +  ++  I  GKNVE RDC  S CYPSCYSGSPP RTENPLVHD+YFLHQME+ S FS
Sbjct: 61  GDSRSEVLNIIEGKNVEARDCFSSGCYPSCYSGSPPGRTENPLVHDMYFLHQMEIRSSFS 120

Query: 121 HTKLSEKFSLTSASPT 133
            T LS+KF+LTSASPT
Sbjct: 121 RTNLSDKFNLTSASPT 135

[Close]

BLAST of MS010633 vs. NCBI nr
Match: XP_031743884.1 (uncharacterized protein LOC116404717 [Cucumis sativus] >KGN48953.1 hypothetical protein Csa_003840 [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 4.7e-40
Identity = 92/136 (67.65%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   MHRHIATKSNLVDSSPETN----NNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLS 60
           MH H ATKSNLVDS  ETN     + N LPLCPKPRR  P IP+FL PL CA  IH   S
Sbjct: 1   MH-HRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSS 60

Query: 61  HLTLLQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFS 120
             +  ++  I  GKNVEGRDCL S CYPSCYSGSPP RTENPLVHD+YFLHQME+ SPFS
Sbjct: 61  GDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTENPLVHDMYFLHQMEIHSPFS 120

Query: 121 HTKLSEKFSLTSASPT 133
            T LS+KF+LTSASPT
Sbjct: 121 RTNLSDKFNLTSASPT 135

[Close]

BLAST of MS010633 vs. NCBI nr
Match: KAG7026720.1 (hypothetical protein SDJN02_10724, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 2.0e-35
Identity = 81/118 (68.64%), Postives = 87/118 (73.73%), Query Frame = 0


Query: 1   MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLSHLTL 60
           MH HIA KSNLVDSSPET++N    PLCPKPRR RP IP+FL P RCA RIH   S    
Sbjct: 4   MH-HIAAKSNLVDSSPETDHNAP--PLCPKPRRIRPAIPSFLAPFRCAHRIHSQSSSDPR 63

Query: 61  LQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHT 119
             +  I  GK VEGRDCLC NCYPSCYSGSPP RT NPLV DVYFLHQ+E+ SPFS T
Sbjct: 64  SAILNIIAGKGVEGRDCLCLNCYPSCYSGSPPGRTGNPLVQDVYFLHQVEIQSPFSRT 118

[Close]

BLAST of MS010633 vs. ExPASy TrEMBL
Match: A0A6J1BUP6 (uncharacterized protein LOC111005918 OS=Momordica charantia OX=3673 GN=LOC111005918 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 118/132 (89.39%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLSHLTL 60
           MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIH   S    
Sbjct: 2   MHRHIATKSNLVDSSPETNNNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHSQSSGEGR 61

Query: 61  LQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTKL 120
             +  I  GKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTKL
Sbjct: 62  NGILNIIAGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTKL 121

Query: 121 SEKFSLTSASPT 133
           SEKFSLTSASPT
Sbjct: 122 SEKFSLTSASPT 133

[Close]

BLAST of MS010633 vs. ExPASy TrEMBL
Match: A0A5D3CKV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00940 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40
Identity = 92/136 (67.65%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   MHRHIATKSNLVDSSPETN----NNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLS 60
           MH HIATKSNLVDS  ETN     + N LPLCPKPRR  P IP+FLVPLRCA  IH   S
Sbjct: 1   MH-HIATKSNLVDSDLETNQPGFKDNNGLPLCPKPRRLEPAIPSFLVPLRCAHHIHSQSS 60

Query: 61  HLTLLQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFS 120
             +  ++  I  GKNVE RDC  S CYPSCYSGSPP RTENPLVHD+YFLHQME+ S FS
Sbjct: 61  GDSRSEVLNIIEGKNVEARDCFSSGCYPSCYSGSPPGRTENPLVHDMYFLHQMEIRSSFS 120

Query: 121 HTKLSEKFSLTSASPT 133
            T LS+KF+LTSASPT
Sbjct: 121 RTNLSDKFNLTSASPT 135

[Close]

BLAST of MS010633 vs. ExPASy TrEMBL
Match: A0A0A0KHD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507270 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.3e-40
Identity = 92/136 (67.65%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 1   MHRHIATKSNLVDSSPETN----NNVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLS 60
           MH H ATKSNLVDS  ETN     + N LPLCPKPRR  P IP+FL PL CA  IH   S
Sbjct: 1   MH-HRATKSNLVDSDLETNQHGFKDNNGLPLCPKPRRLEPAIPSFLAPLICAHHIHSQSS 60

Query: 61  HLTLLQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFS 120
             +  ++  I  GKNVEGRDCL S CYPSCYSGSPP RTENPLVHD+YFLHQME+ SPFS
Sbjct: 61  GDSRSEILNIIEGKNVEGRDCLSSGCYPSCYSGSPPGRTENPLVHDMYFLHQMEIHSPFS 120

Query: 121 HTKLSEKFSLTSASPT 133
            T LS+KF+LTSASPT
Sbjct: 121 RTNLSDKFNLTSASPT 135

[Close]

BLAST of MS010633 vs. ExPASy TrEMBL
Match: A0A2C9WEC2 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G109600 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.4e-29
Identity = 74/131 (56.49%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 4   HIATKSNLVDSSPETNN---NVNCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSLSHLTL 63
           H+  KSNLVDSS +T       N  PLCPKPRR  PTIP FL   + +  I    + +  
Sbjct: 3   HLPVKSNLVDSSSDTTKLGFRGNNQPLCPKPRRLGPTIPEFLKCTKHSQPISDGRTGI-- 62

Query: 64  LQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPFSHTKL 123
             L+ IT  K ++GR+ +CS C PSCYSGSPP RT+NPLVHDV+F+HQMELLSPF+ TKL
Sbjct: 63  --LNLIT-DKGIDGRESICSGCSPSCYSGSPPGRTDNPLVHDVHFIHQMELLSPFTRTKL 122

Query: 124 SEKFSLTSASP 132
           S+KF  TSASP
Sbjct: 123 SDKFGFTSASP 128

[Close]

BLAST of MS010633 vs. ExPASy TrEMBL
Match: A0A5B7BXZ4 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_043220 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 9.0e-29
Identity = 74/136 (54.41%), Postives = 93/136 (68.38%), Query Frame = 0


Query: 1   MHRHIATKSNLVDS-SPETNNNV----NCLPLCPKPRRPRPTIPNFLVPLRCADRIHRSL 60
           MH H+A KSNLVD+ SPET   +    N +P+CPKPRR    IP FL PLRC+   H + 
Sbjct: 1   MH-HLAVKSNLVDTGSPETTTKLGFGGNDMPVCPKPRRLGSAIPEFLKPLRCSKHSHPNT 60

Query: 61  SHLTLLQLSFITYGKNVEGRDCLCSNCYPSCYSGSPPRRTENPLVHDVYFLHQMELLSPF 120
              + + L+ I   K+V+GR+ +C+ C P CYSGSPP RT+NPLV DV F+HQMEL SP 
Sbjct: 61  DGRSSV-LNMIA-EKSVDGRESICNGCLPRCYSGSPPGRTDNPLVQDVQFIHQMELFSPL 120

Query: 121 SHTKLSEKFSLTSASP 132
           + TKLS+KF  TSASP
Sbjct: 121 TRTKLSDKFGFTSASP 133

The following BLAST results are available for this feature:

BLAST of MS010633 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133306.1	8.2e-61	89.39	uncharacterized protein LOC111005918 [Momordica charantia]	[more]
XP_038881848.1	2.5e-41	68.42	uncharacterized protein LOC120073212 [Benincasa hispida]	[more]
KAA0025640.1	3.6e-40	67.65	hypothetical protein E6C27_scaffold253G001330 [Cucumis melo var. makuwa] >TYK125...	[more]
XP_031743884.1	4.7e-40	67.65	uncharacterized protein LOC116404717 [Cucumis sativus] >KGN48953.1 hypothetical ...	[more]
KAG7026720.1	2.0e-35	68.64	hypothetical protein SDJN02_10724, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MS010633 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS010633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BUP6	4.0e-61	89.39	uncharacterized protein LOC111005918 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5D3CKV6	1.7e-40	67.65	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KHD1	2.3e-40	67.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507270 PE=4 SV=1	[more]
A0A2C9WEC2	2.4e-29	56.49	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G109600 PE=4 SV=...	[more]
A0A5B7BXZ4	9.0e-29	54.41	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_043220 PE=4 SV=1	[more]

BLAST of MS010633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..130
None	No IPR available	PANTHER	PTHR33384:SF17	BNAC07G32200D PROTEIN	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010633.1	MS010633.1	mRNA