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MS010623 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGAATAAGCGGAGCACTTCTGAAAGATGCGGGTTCTGGTCTCACCAAGACTCTCTCTGAGATCCTGGTCTGCCCGCTCACGAAGCAACCGCTGAGGTGATCATTCGATTTGTACTCCACAATTTTCTGTCCTTCTAGCAAATTCCTCGTGCATAATTTGTTTGGTTGTGCGTTTTTGCCGTTAGGTATTGCGAGGCGTCGAATTCTCTAATTAGCGATACGATTGGTGTTTCTTTCCCTGTAAGTACATAAAGAGAATGTATCTGCTTGAATTATGCAAGATTTTGGATTCCAGTCTATTTGTTCATCTTGAGCCGTTTTCTGATTTCATTTAGAAATTTCTTTTTCCATGTTAGCGCTCTGGTTCAGTTTCTGGAACATTTATAGCGAAGGCTTACAGTGACTTTGAGTCATATTAATCTAGCTACTCATGGATCGTGACACTCTTGGTTCGATTAGTGAAATTAAATCTTTCTCAATTTTGCAAGCGTAGGTAGTAAGAGTGGCTGTATGAACCAGAAAGCAGTGTTTAGTAATTTTTGGAAGCATGGAGAAGGGAACCATTGAGTTTCTTTCCCTTTTTTCTTCCCTCATTTGTGGGAGTTAGGCTAAAAGACATATGCCTGTTTCTATTTTATGTTGTAATTCATCCGTCTTTCTTATGATTATGTTAGATAAAGGGCGGAATTCCTTGCTTGGTGCCTAAGGATGGAAGGATAATTGAAACTGATGATGCATTGAAACGTGAGGATCGTGAAAAA ATGGTGAGAATAAGCGGAGCACTTCTGAAAGATGCGGGTTCTGGTCTCACCAAGACTCTCTCTGAGATCCTGGTCTGCCCGCTCACGAAGCAACCGCTGAGGTATTGCGAGGCGTCGAATTCTCTAATTAGCGATACGATTGGTGTTTCTTTCCCTATAAAGGGCGGAATTCCTTGCTTGGTGCCTAAGGATGGAAGGATAATTGAAACTGATGATGCATTGAAACGTGAGGATCGTGAAAAA ATGGTGAGAATAAGCGGAGCACTTCTGAAAGATGCGGGTTCTGGTCTCACCAAGACTCTCTCTGAGATCCTGGTCTGCCCGCTCACGAAGCAACCGCTGAGGTATTGCGAGGCGTCGAATTCTCTAATTAGCGATACGATTGGTGTTTCTTTCCCTATAAAGGGCGGAATTCCTTGCTTGGTGCCTAAGGATGGAAGGATAATTGAAACTGATGATGCATTGAAACGTGAGGATCGTGAAAAA MVRISGALLKDAGSGLTKTLSEILVCPLTKQPLRYCEASNSLISDTIGVSFPIKGGIPCLVPKDGRIIETDDALKREDREK Homology
BLAST of MS010623 vs. NCBI nr
Match: XP_022132378.1 (uncharacterized protein LOC111005251 isoform X2 [Momordica charantia]) HSP 1 Score: 162.2 bits (409), Expect = 1.9e-36 Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of MS010623 vs. NCBI nr
Match: XP_022949957.1 (uncharacterized protein LOC111453193 [Cucurbita moschata] >XP_023544418.1 uncharacterized protein LOC111804007 [Cucurbita pepo subsp. pepo] >KAG7034074.1 hypothetical protein SDJN02_03801 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 140.6 bits (353), Expect = 6.0e-30 Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS010623 vs. NCBI nr
Match: XP_022977422.1 (uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima]) HSP 1 Score: 138.3 bits (347), Expect = 3.0e-29 Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of MS010623 vs. NCBI nr
Match: KAG6603894.1 (hypothetical protein SDJN03_04503, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.5 bits (345), Expect = 5.1e-29 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 0
BLAST of MS010623 vs. NCBI nr
Match: XP_038883681.1 (UPF0434 protein Ecaj_0131 [Benincasa hispida]) HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28 Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 0
BLAST of MS010623 vs. ExPASy Swiss-Prot
Match: Q5M8Z2 (Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 5.5e-10 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 0
BLAST of MS010623 vs. ExPASy Swiss-Prot
Match: Q96I23 (Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.8e-08 Identity = 27/62 (43.55%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of MS010623 vs. ExPASy Swiss-Prot
Match: Q2T9V7 (Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-07 Identity = 27/64 (42.19%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of MS010623 vs. ExPASy Swiss-Prot
Match: Q5U1Z8 (Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 2.0e-07 Identity = 22/47 (46.81%), Postives = 36/47 (76.60%), Query Frame = 0
BLAST of MS010623 vs. ExPASy Swiss-Prot
Match: Q9D1C3 (Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.4e-07 Identity = 24/62 (38.71%), Postives = 44/62 (70.97%), Query Frame = 0
BLAST of MS010623 vs. ExPASy TrEMBL
Match: A0A6J1BW32 (uncharacterized protein LOC111005251 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005251 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 9.4e-37 Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of MS010623 vs. ExPASy TrEMBL
Match: A0A6J1GDI4 (uncharacterized protein LOC111453193 OS=Cucurbita moschata OX=3662 GN=LOC111453193 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.9e-30 Identity = 68/78 (87.18%), Postives = 74/78 (94.87%), Query Frame = 0
BLAST of MS010623 vs. ExPASy TrEMBL
Match: A0A6J1IIE0 (uncharacterized protein LOC111477769 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477769 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29 Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = 0
BLAST of MS010623 vs. ExPASy TrEMBL
Match: A0A5A7SJZ8 (UPF0434 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001030 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28 Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0
BLAST of MS010623 vs. ExPASy TrEMBL
Match: A0A1S3B2Q6 (UPF0434 protein ECH_0194 OS=Cucumis melo OX=3656 GN=LOC103485154 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28 Identity = 66/78 (84.62%), Postives = 71/78 (91.03%), Query Frame = 0
BLAST of MS010623 vs. TAIR 10
Match: AT4G35905.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF343 (InterPro:IPR005651); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 114.0 bits (284), Expect = 5.6e-26 Identity = 55/76 (72.37%), Postives = 66/76 (86.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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