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MS010590 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATCAATTATCTCCCTCCCTCCCACCAGCCAAAAACACACAACACCTCCCTTTTACTACTATAATGGCTATCAAAAGGGCAAATCTACTTCAGCCATCAGCCTCCTTCAGACATATTATCAAAAGATGCTCGAGTTTTGGCAAGAGAAATGGCTGCAATGAAGACAGCCTACCCGACGACGTCCCGAAGGGCCACTTTGCTGTCTACGTAGGGGAAAACCGAAGCCGATATATTGTCCCGATATCGTGGTTGGGTCACCCCCAGTTCCAGAGCCTGCTGCAGATTGCAGAAGAGGAGTTTGGTTTCAGCCATGACATGGGACTCACCATCCCTTGTGAAGAGGTTGTTTTTCGCTCCTTAACAGCCATGATCAAG CATCAATTATCTCCCTCCCTCCCACCAGCCAAAAACACACAACACCTCCCTTTTACTACTATAATGGCTATCAAAAGGGCAAATCTACTTCAGCCATCAGCCTCCTTCAGACATATTATCAAAAGATGCTCGAGTTTTGGCAAGAGAAATGGCTGCAATGAAGACAGCCTACCCGACGACGTCCCGAAGGGCCACTTTGCTGTCTACGTAGGGGAAAACCGAAGCCGATATATTGTCCCGATATCGTGGTTGGGTCACCCCCAGTTCCAGAGCCTGCTGCAGATTGCAGAAGAGGAGTTTGGTTTCAGCCATGACATGGGACTCACCATCCCTTGTGAAGAGGTTGTTTTTCGCTCCTTAACAGCCATGATCAAG CATCAATTATCTCCCTCCCTCCCACCAGCCAAAAACACACAACACCTCCCTTTTACTACTATAATGGCTATCAAAAGGGCAAATCTACTTCAGCCATCAGCCTCCTTCAGACATATTATCAAAAGATGCTCGAGTTTTGGCAAGAGAAATGGCTGCAATGAAGACAGCCTACCCGACGACGTCCCGAAGGGCCACTTTGCTGTCTACGTAGGGGAAAACCGAAGCCGATATATTGTCCCGATATCGTGGTTGGGTCACCCCCAGTTCCAGAGCCTGCTGCAGATTGCAGAAGAGGAGTTTGGTTTCAGCCATGACATGGGACTCACCATCCCTTGTGAAGAGGTTGTTTTTCGCTCCTTAACAGCCATGATCAAG HQLSPSLPPAKNTQHLPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK Homology
BLAST of MS010590 vs. NCBI nr
Match: XP_022132983.1 (auxin-responsive protein SAUR50 [Momordica charantia]) HSP 1 Score: 220.3 bits (560), Expect = 9.2e-54 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of MS010590 vs. NCBI nr
Match: XP_038883315.1 (auxin-responsive protein SAUR50 [Benincasa hispida]) HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48 Identity = 96/105 (91.43%), Postives = 100/105 (95.24%), Query Frame = 0
BLAST of MS010590 vs. NCBI nr
Match: KAE8647605.1 (hypothetical protein Csa_003512 [Cucumis sativus]) HSP 1 Score: 202.6 bits (514), Expect = 2.0e-48 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS010590 vs. NCBI nr
Match: XP_008440807.1 (PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0025685.1 auxin-induced protein 15A [Cucumis melo var. makuwa] >TYK12560.1 auxin-induced protein 15A [Cucumis melo var. makuwa]) HSP 1 Score: 202.6 bits (514), Expect = 2.0e-48 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS010590 vs. NCBI nr
Match: XP_023003936.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima]) HSP 1 Score: 201.8 bits (512), Expect = 3.4e-48 Identity = 100/131 (76.34%), Postives = 109/131 (83.21%), Query Frame = 0
BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 9.0e-36 Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0
BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 5.0e-34 Identity = 73/112 (65.18%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.7e-29 Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 2.7e-16 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 7.9e-16 Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 0
BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A6J1BXR8 (auxin-responsive protein SAUR50 OS=Momordica charantia OX=3673 GN=LOC111005689 PE=3 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 4.5e-54 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A5D3CM97 (Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001420 PE=3 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 9.7e-49 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A1S3B1Z6 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103485116 PE=3 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 9.7e-49 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A6J1KQN6 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111497378 PE=3 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48 Identity = 100/131 (76.34%), Postives = 109/131 (83.21%), Query Frame = 0
BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A6J1IS43 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111478810 PE=3 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.8e-48 Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of MS010590 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 154.1 bits (388), Expect = 7.6e-38 Identity = 73/103 (70.87%), Postives = 85/103 (82.52%), Query Frame = 0
BLAST of MS010590 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 151.0 bits (380), Expect = 6.4e-37 Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0
BLAST of MS010590 vs. TAIR 10
Match: AT2G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 145.2 bits (365), Expect = 3.5e-35 Identity = 73/112 (65.18%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of MS010590 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 144.8 bits (364), Expect = 4.6e-35 Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 0
BLAST of MS010590 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 143.7 bits (361), Expect = 1.0e-34 Identity = 70/105 (66.67%), Postives = 84/105 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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