MS010590 (gene) Bitter gourd (TR) v1

Overview


Name	MS010590
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	auxin-responsive protein SAUR50
Location	scaffold35: 835097 .. 835471 (-)
RNA-Seq Expression	MS010590
Synteny	MS010590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAATTATCTCCCTCCCTCCCACCAGCCAAAAACACACAACACCTCCCTTTTACTACTATAATGGCTATCAAAAGGGCAAATCTACTTCAGCCATCAGCCTCCTTCAGACATATTATCAAAAGATGCTCGAGTTTTGGCAAGAGAAATGGCTGCAATGAAGACAGCCTACCCGACGACGTCCCGAAGGGCCACTTTGCTGTCTACGTAGGGGAAAACCGAAGCCGATATATTGTCCCGATATCGTGGTTGGGTCACCCCCAGTTCCAGAGCCTGCTGCAGATTGCAGAAGAGGAGTTTGGTTTCAGCCATGACATGGGACTCACCATCCCTTGTGAAGAGGTTGTTTTTCGCTCCTTAACAGCCATGATCAAG

mRNA sequence

CATCAATTATCTCCCTCCCTCCCACCAGCCAAAAACACACAACACCTCCCTTTTACTACTATAATGGCTATCAAAAGGGCAAATCTACTTCAGCCATCAGCCTCCTTCAGACATATTATCAAAAGATGCTCGAGTTTTGGCAAGAGAAATGGCTGCAATGAAGACAGCCTACCCGACGACGTCCCGAAGGGCCACTTTGCTGTCTACGTAGGGGAAAACCGAAGCCGATATATTGTCCCGATATCGTGGTTGGGTCACCCCCAGTTCCAGAGCCTGCTGCAGATTGCAGAAGAGGAGTTTGGTTTCAGCCATGACATGGGACTCACCATCCCTTGTGAAGAGGTTGTTTTTCGCTCCTTAACAGCCATGATCAAG

Coding sequence (CDS)

CATCAATTATCTCCCTCCCTCCCACCAGCCAAAAACACACAACACCTCCCTTTTACTACTATAATGGCTATCAAAAGGGCAAATCTACTTCAGCCATCAGCCTCCTTCAGACATATTATCAAAAGATGCTCGAGTTTTGGCAAGAGAAATGGCTGCAATGAAGACAGCCTACCCGACGACGTCCCGAAGGGCCACTTTGCTGTCTACGTAGGGGAAAACCGAAGCCGATATATTGTCCCGATATCGTGGTTGGGTCACCCCCAGTTCCAGAGCCTGCTGCAGATTGCAGAAGAGGAGTTTGGTTTCAGCCATGACATGGGACTCACCATCCCTTGTGAAGAGGTTGTTTTTCGCTCCTTAACAGCCATGATCAAG

Protein sequence

HQLSPSLPPAKNTQHLPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK

Homology

[Close]

BLAST of MS010590 vs. NCBI nr
Match: XP_022132983.1 (auxin-responsive protein SAUR50 [Momordica charantia])

HSP 1 Score: 220.3 bits (560), Expect = 9.2e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 81
           MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI
Sbjct: 1   MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 60

Query: 82  SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK
Sbjct: 61  SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 104

[Close]

BLAST of MS010590 vs. NCBI nr
Match: XP_038883315.1 (auxin-responsive protein SAUR50 [Benincasa hispida])

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48
Identity = 96/105 (91.43%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVP 81
           MAIK+ANLLQPSASF+HI+KRCSSFGKR NGCNED LPDDVPKGHF VYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFKHILKRCSSFGKRSNGCNEDGLPDDVPKGHFPVYVGENRSRYIVP 60

Query: 82  ISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           ISWL HPQFQSLLQ AEEEFGFSHDMG+TIPCEEVVFRSLTAMIK
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFSHDMGITIPCEEVVFRSLTAMIK 105

[Close]

BLAST of MS010590 vs. NCBI nr
Match: KAE8647605.1 (hypothetical protein Csa_003512 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 2.0e-48
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVP 81
           MAIK+ANLLQPSASFRHI+KRCSSFGKR NGCNED LP+DVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFRHILKRCSSFGKRTNGCNEDGLPEDVPKGHFAVYVGENRSRYIVP 60

Query: 82  ISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           ISWL HPQFQSLLQ AEEEFGF+HDMG+TIPCEEVVFRSLT+MIK
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFNHDMGITIPCEEVVFRSLTSMIK 105

[Close]

BLAST of MS010590 vs. NCBI nr
Match: XP_008440807.1 (PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0025685.1 auxin-induced protein 15A [Cucumis melo var. makuwa] >TYK12560.1 auxin-induced protein 15A [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 2.0e-48
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVP 81
           MAIK+ANLLQPSASFRHI+KRCSSFGKR NGCNED LP+DVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFRHILKRCSSFGKRTNGCNEDGLPEDVPKGHFAVYVGENRSRYIVP 60

Query: 82  ISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           ISWL HPQFQSLLQ AEEEFGF+HDMG+TIPCEEVVFRSLT+MIK
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFNHDMGITIPCEEVVFRSLTSMIK 105

[Close]

BLAST of MS010590 vs. NCBI nr
Match: XP_023003936.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 201.8 bits (512), Expect = 3.4e-48
Identity = 100/131 (76.34%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   HQLSPSLPPAKNTQH------LPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNE 60
           + + PSLPPA  T +      L  T IMAIK+ANLL PS SFRHI++RCSSFG RNG NE
Sbjct: 31  YHIFPSLPPATKTNNTHRHFVLLSTLIMAIKKANLLHPSTSFRHILRRCSSFGMRNGWNE 90

Query: 61  D-SLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCE 120
           D  LPDDVPKGHFAVYVGENRSRYIVPISWL HPQFQSLLQ AEEEFGF+HD+G+TIPCE
Sbjct: 91  DGGLPDDVPKGHFAVYVGENRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHDLGITIPCE 150

Query: 121 EVVFRSLTAMI 125
           EVVFRSLTAMI
Sbjct: 151 EVVFRSLTAMI 161

[Close]

BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.0e-36
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 24  IKRANLLQPSASFRHIIKRCSSFGKRN--GCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 83
           +K+ + L  +A  + I+KRCSS GK+N  G +ED LP DVPKGHF VYVGENRSRYIVPI
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPI 63

Query: 84  SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           S+L HP+FQSLLQ AEEEFGF HDMGLTIPC+E+VF++LT+MI+
Sbjct: 64  SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.0e-34
Identity = 73/112 (65.18%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 22  MAIKRANLLQPS--ASFRHIIKRCSSFGKR---NGC---NEDSLPDDVPKGHFAVYVGEN 81
           MAIKR++    S  AS + I+KRCSS  K    NGC    ED LP DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 82  RSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           RSRYIVPISWL H +FQ+LL++AEEEFGF HDMGLTIPC+EV FRSL +M +
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.7e-29
Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 24  IKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPISW 83
           I++++    + + + IIK+CSSFGK N  ++  LP+DVPKGHF VYVGE R+RYIVPIS 
Sbjct: 4   IRKSHKQTQALAIKKIIKKCSSFGKNN--DDSGLPNDVPKGHFVVYVGERRNRYIVPISC 63

Query: 84  LGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMI 125
           L HP FQ LLQ +EEEFGF+HDMG+ IPC+EV F S  +MI
Sbjct: 64  LDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-16
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 0


Query: 51  GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDM-GLT 110
           G  + S   D PKG+ AVYVGE   R+++P+S+L  P FQ LL  AEEEFG+ H M GLT
Sbjct: 7   GIRKASKAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLT 66

Query: 111 IPCEEVVFRSLTAMI 125
           IPC E VF+ +T+ +
Sbjct: 67  IPCSEDVFQCITSCL 81

[Close]

BLAST of MS010590 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.9e-16
Identity = 38/75 (50.67%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 51  GCNEDSLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDM-GLT 110
           G  + S   D PKG+ AVYVGE   R+++P+S++  P FQ LL  AEEEFG+ H M GLT
Sbjct: 7   GIRKASNAVDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLT 66

Query: 111 IPCEEVVFRSLTAMI 125
           IPC E VF+ +T  +
Sbjct: 67  IPCSEEVFQRITCCL 81

[Close]

BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A6J1BXR8 (auxin-responsive protein SAUR50 OS=Momordica charantia OX=3673 GN=LOC111005689 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.5e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 81
           MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI
Sbjct: 1   MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 60

Query: 82  SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK
Sbjct: 61  SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 104

[Close]

BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A5D3CM97 (Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001420 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.7e-49
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVP 81
           MAIK+ANLLQPSASFRHI+KRCSSFGKR NGCNED LP+DVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFRHILKRCSSFGKRTNGCNEDGLPEDVPKGHFAVYVGENRSRYIVP 60

Query: 82  ISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           ISWL HPQFQSLLQ AEEEFGF+HDMG+TIPCEEVVFRSLT+MIK
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFNHDMGITIPCEEVVFRSLTSMIK 105

[Close]

BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A1S3B1Z6 (auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103485116 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.7e-49
Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKR-NGCNEDSLPDDVPKGHFAVYVGENRSRYIVP 81
           MAIK+ANLLQPSASFRHI+KRCSSFGKR NGCNED LP+DVPKGHFAVYVGENRSRYIVP
Sbjct: 1   MAIKKANLLQPSASFRHILKRCSSFGKRTNGCNEDGLPEDVPKGHFAVYVGENRSRYIVP 60

Query: 82  ISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           ISWL HPQFQSLLQ AEEEFGF+HDMG+TIPCEEVVFRSLT+MIK
Sbjct: 61  ISWLAHPQFQSLLQRAEEEFGFNHDMGITIPCEEVVFRSLTSMIK 105

[Close]

BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A6J1KQN6 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111497378 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 100/131 (76.34%), Postives = 109/131 (83.21%), Query Frame = 0


Query: 1   HQLSPSLPPAKNTQH------LPFTTIMAIKRANLLQPSASFRHIIKRCSSFGKRNGCNE 60
           + + PSLPPA  T +      L  T IMAIK+ANLL PS SFRHI++RCSSFG RNG NE
Sbjct: 31  YHIFPSLPPATKTNNTHRHFVLLSTLIMAIKKANLLHPSTSFRHILRRCSSFGMRNGWNE 90

Query: 61  D-SLPDDVPKGHFAVYVGENRSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCE 120
           D  LPDDVPKGHFAVYVGENRSRYIVPISWL HPQFQSLLQ AEEEFGF+HD+G+TIPCE
Sbjct: 91  DGGLPDDVPKGHFAVYVGENRSRYIVPISWLAHPQFQSLLQRAEEEFGFNHDLGITIPCE 150

Query: 121 EVVFRSLTAMI 125
           EVVFRSLTAMI
Sbjct: 151 EVVFRSLTAMI 161

[Close]

BLAST of MS010590 vs. ExPASy TrEMBL
Match: A0A6J1IS43 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111478810 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 2.8e-48
Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 81
           MAIK+ NLLQPSAS RHI+KRCSSFGKRNGCN+D LPDDVPKGHFAVYVGENRSR+IVPI
Sbjct: 1   MAIKKGNLLQPSASIRHILKRCSSFGKRNGCNDDGLPDDVPKGHFAVYVGENRSRHIVPI 60

Query: 82  SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           SWL HPQFQSLL  AEEEFGF+HDMG+TIPCEEVVFRSLTAMIK
Sbjct: 61  SWLAHPQFQSLLHRAEEEFGFNHDMGITIPCEEVVFRSLTAMIK 104

[Close]

BLAST of MS010590 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 154.1 bits (388), Expect = 7.6e-38
Identity = 73/103 (70.87%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 81
           MA+KR++ L  +A  + I+KRCSS  K    +ED LP DVPKGHF VYVGE RSRYIVPI
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLAKNQCYDEDGLPVDVPKGHFPVYVGEKRSRYIVPI 60

Query: 82  SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMI 125
           S+L HP+F+SLLQ AEEEFGF+HDMGLTIPCEEVVFRSLT+MI
Sbjct: 61  SFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of MS010590 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 151.0 bits (380), Expect = 6.4e-37
Identity = 71/104 (68.27%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 24  IKRANLLQPSASFRHIIKRCSSFGKRN--GCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 83
           +K+ + L  +A  + I+KRCSS GK+N  G +ED LP DVPKGHF VYVGENRSRYIVPI
Sbjct: 4   MKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPI 63

Query: 84  SWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           S+L HP+FQSLLQ AEEEFGF HDMGLTIPC+E+VF++LT+MI+
Sbjct: 64  SFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of MS010590 vs. TAIR 10
Match: AT2G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 145.2 bits (365), Expect = 3.5e-35
Identity = 73/112 (65.18%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 22  MAIKRANLLQPS--ASFRHIIKRCSSFGKR---NGC---NEDSLPDDVPKGHFAVYVGEN 81
           MAIKR++    S  AS + I+KRCSS  K    NGC    ED LP DVPKGHF VYVG N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 82  RSRYIVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           RSRYIVPISWL H +FQ+LL++AEEEFGF HDMGLTIPC+EV FRSL +M +
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of MS010590 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.8 bits (364), Expect = 4.6e-35
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKRN----GCNEDSLPDDVPKGHFAVYVGENRSRY 81
           MA+K+AN L  +A  + I+KRCSS GK+     G +E+  P +VPKGHF VYVGENR RY
Sbjct: 1   MAMKKANKLTQTAMIKQILKRCSSLGKKQSNVYGEDENGSPLNVPKGHFVVYVGENRVRY 60

Query: 82  IVPISWLGHPQFQSLLQIAEEEFGFSHDMGLTIPCEEVVFRSLTAMIK 126
           +VPIS+L  P+FQ LLQ AEEEFGF HDMGLTIPCEEVVFRSLT+M++
Sbjct: 61  VVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of MS010590 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-34
Identity = 70/105 (66.67%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 22  MAIKRANLLQPSASFRHIIKRCSSFGKRNGCNEDSLPDDVPKGHFAVYVGENRSRYIVPI 81
           MA+KR++ L  +A  + I+KRCSS GK+   +E+ LP DVPKGHF VYVGE R+RYIVPI
Sbjct: 1   MAVKRSSKLTQTAMLKQILKRCSSLGKKQCYDEEGLPLDVPKGHFPVYVGEKRTRYIVPI 60

Query: 82  SWLGHPQFQSLLQIAEEEFGFSHDM-GLTIPCEEVVFRSLTAMIK 126
           S+L HP+F  LLQ AEEEFGF HDM GLTIPCEEVVF SLT+MI+
Sbjct: 61  SFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

The following BLAST results are available for this feature:

BLAST of MS010590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132983.1	9.2e-54	100.00	auxin-responsive protein SAUR50 [Momordica charantia]	[more]
XP_038883315.1	1.2e-48	91.43	auxin-responsive protein SAUR50 [Benincasa hispida]	[more]
KAE8647605.1	2.0e-48	90.48	hypothetical protein Csa_003512 [Cucumis sativus]	[more]
XP_008440807.1	2.0e-48	90.48	PREDICTED: auxin-induced protein 15A [Cucumis melo] >KAA0025685.1 auxin-induced ...	[more]
XP_023003936.1	3.4e-48	76.34	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]

BLAST of MS010590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	9.0e-36	68.27	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	5.0e-34	65.18	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	3.7e-29	59.41	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33081	2.7e-16	52.00	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	7.9e-16	50.67	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of MS010590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXR8	4.5e-54	100.00	auxin-responsive protein SAUR50 OS=Momordica charantia OX=3673 GN=LOC111005689 P...	[more]
A0A5D3CM97	9.7e-49	90.48	Auxin-induced protein 15A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B1Z6	9.7e-49	90.48	auxin-induced protein 15A OS=Cucumis melo OX=3656 GN=LOC103485116 PE=3 SV=1	[more]
A0A6J1KQN6	1.6e-48	76.34	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111497378...	[more]
A0A6J1IS43	2.8e-48	88.46	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111478810...	[more]

BLAST of MS010590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21220.1	7.6e-38	70.87	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	6.4e-37	68.27	SAUR-like auxin-responsive protein family	[more]
AT2G18010.1	3.5e-35	65.18	SAUR-like auxin-responsive protein family	[more]
AT1G75580.1	4.6e-35	64.81	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	1.0e-34	66.67	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 43..124 e-value: 5.1E-29 score: 100.3
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 28..125
None	No IPR available	PANTHER	PTHR31374:SF242	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 28..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010590.1	MS010590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin