MS010546 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAGAGCTTTGAGTACACGGAGGTGTCCTCACAGGTACGAGCGACTCGGGGAGGATCCTACCATTAGCCTGTTGGAAGGGCGGCTGAAGAGGGCAACCAGTTTGCCGACCCGAGTACTCGGTTCTGCATCAAGGAAGTCGCCTCTAGAGATTGTATTTGCTGAGACTGCTCAAGTGAAACACAGGCAGTCGAAGAAAGCTAGCAGAGGACACCCTCTGTTTAGTTTCTTTGATTTTCGCCGCAAGAGGAAGACGACGGCGAAGCCTGAATTTGCAAGGTATCTAGAGTATGTGAAGGAGGGAGGGCTGTGGGATTTGAAGGCAAATGCTCCTGTAATTTACTATAAA ATGTTGAGAGCTTTGAGTACACGGAGGTGTCCTCACAGGTACGAGCGACTCGGGGAGGATCCTACCATTAGCCTGTTGGAAGGGCGGCTGAAGAGGGCAACCAGTTTGCCGACCCGAGTACTCGGTTCTGCATCAAGGAAGTCGCCTCTAGAGATTGTATTTGCTGAGACTGCTCAAGTGAAACACAGGCAGTCGAAGAAAGCTAGCAGAGGACACCCTCTGTTTAGTTTCTTTGATTTTCGCCGCAAGAGGAAGACGACGGCGAAGCCTGAATTTGCAAGGTATCTAGAGTATGTGAAGGAGGGAGGGCTGTGGGATTTGAAGGCAAATGCTCCTGTAATTTACTATAAA ATGTTGAGAGCTTTGAGTACACGGAGGTGTCCTCACAGGTACGAGCGACTCGGGGAGGATCCTACCATTAGCCTGTTGGAAGGGCGGCTGAAGAGGGCAACCAGTTTGCCGACCCGAGTACTCGGTTCTGCATCAAGGAAGTCGCCTCTAGAGATTGTATTTGCTGAGACTGCTCAAGTGAAACACAGGCAGTCGAAGAAAGCTAGCAGAGGACACCCTCTGTTTAGTTTCTTTGATTTTCGCCGCAAGAGGAAGACGACGGCGAAGCCTGAATTTGCAAGGTATCTAGAGTATGTGAAGGAGGGAGGGCTGTGGGATTTGAAGGCAAATGCTCCTGTAATTTACTATAAA MLRALSTRRCPHRYERLGEDPTISLLEGRLKRATSLPTRVLGSASRKSPLEIVFAETAQVKHRQSKKASRGHPLFSFFDFRRKRKTTAKPEFARYLEYVKEGGLWDLKANAPVIYYK Homology
BLAST of MS010546 vs. NCBI nr
Match: XP_022132575.1 (uncharacterized protein LOC111005403 [Momordica charantia]) HSP 1 Score: 236.1 bits (601), Expect = 1.5e-58 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of MS010546 vs. NCBI nr
Match: XP_038883128.1 (uncharacterized protein LOC120074173 [Benincasa hispida]) HSP 1 Score: 201.8 bits (512), Expect = 3.2e-48 Identity = 99/118 (83.90%), Postives = 108/118 (91.53%), Query Frame = 0
BLAST of MS010546 vs. NCBI nr
Match: XP_011658493.1 (uncharacterized protein LOC105436031 [Cucumis sativus]) HSP 1 Score: 191.0 bits (484), Expect = 5.6e-45 Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 0
BLAST of MS010546 vs. NCBI nr
Match: XP_008440743.1 (PREDICTED: uncharacterized protein LOC103485064 [Cucumis melo]) HSP 1 Score: 187.6 bits (475), Expect = 6.2e-44 Identity = 92/118 (77.97%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of MS010546 vs. NCBI nr
Match: XP_022978577.1 (uncharacterized protein LOC111478516 [Cucurbita maxima]) HSP 1 Score: 184.9 bits (468), Expect = 4.0e-43 Identity = 96/119 (80.67%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of MS010546 vs. ExPASy TrEMBL
Match: A0A6J1BSU6 (uncharacterized protein LOC111005403 OS=Momordica charantia OX=3673 GN=LOC111005403 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 7.4e-59 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of MS010546 vs. ExPASy TrEMBL
Match: A0A0A0KKF4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502830 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 2.7e-45 Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 0
BLAST of MS010546 vs. ExPASy TrEMBL
Match: A0A1S3B2K9 (uncharacterized protein LOC103485064 OS=Cucumis melo OX=3656 GN=LOC103485064 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.0e-44 Identity = 92/118 (77.97%), Postives = 105/118 (88.98%), Query Frame = 0
BLAST of MS010546 vs. ExPASy TrEMBL
Match: A0A6J1ILF9 (uncharacterized protein LOC111478516 OS=Cucurbita maxima OX=3661 GN=LOC111478516 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.9e-43 Identity = 96/119 (80.67%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of MS010546 vs. ExPASy TrEMBL
Match: A0A6J1GER2 (uncharacterized protein LOC111453296 OS=Cucurbita moschata OX=3662 GN=LOC111453296 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 3.7e-42 Identity = 94/119 (78.99%), Postives = 102/119 (85.71%), Query Frame = 0
BLAST of MS010546 vs. TAIR 10
Match: AT4G36500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G18210.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23 Identity = 56/120 (46.67%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of MS010546 vs. TAIR 10
Match: AT3G50900.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66490.1); Has 45 Blast hits to 45 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.7 bits (239), Expect = 1.3e-20 Identity = 59/129 (45.74%), Postives = 82/129 (63.57%), Query Frame = 0
BLAST of MS010546 vs. TAIR 10
Match: AT2G18210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits to 50 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.4 bits (233), Expect = 6.7e-20 Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 0
BLAST of MS010546 vs. TAIR 10
Match: AT5G66490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 87.4 bits (215), Expect = 8.1e-18 Identity = 55/125 (44.00%), Postives = 69/125 (55.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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