MS010541 (gene) Bitter gourd (TR) v1

Overview
NameMS010541
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold35: 422847 .. 422972 (+)
RNA-Seq ExpressionMS010541
SyntenyMS010541
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCCGTGTCTTCTCTTGCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC

mRNA sequence

ATGGCCGCCGTGTCTTCTCTTGCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC

Coding sequence (CDS)

ATGGCCGCCGTGTCTTCTCTTGCTCCTCGCCGGATTCCAAAACGCGGCCAAATCCTCCGCCGTGTTGTTAAAAAGTTGTTCTTCATCTTTCTCTGTTCCGTCGACCGGAATTCTCCTCCACCGCCC

Protein sequence

MAAVSSLAPRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP
Homology
[Close]
BLAST of MS010541 vs. NCBI nr
Match: KAG6594821.1 (hypothetical protein SDJN03_11374, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.6 bits (135), Expect = 5.9e-05
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 1  MAAVSSLAPRRIPKRGQILRRVVKKLFFIFLCSVDRNSPPPP 43
          MAA +  APR IPKRGQ+LRR++KKLFF+  CS    SPPPP
Sbjct: 49 MAAATGAAPRWIPKRGQVLRRILKKLFFLCFCS----SPPPP 86

The following BLAST results are available for this feature:
BLAST of MS010541 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6594821.15.9e-0564.29hypothetical protein SDJN03_11374, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MS010541 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS010541 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS010541 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS010541.1MS010541.1mRNA