Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTGCAGCTGTCAGCACTCTCGTCAGTACGACCATTGCCGCTCAATCGTTTGGATTTCGCATGTAAGCCAGCGAGTTCAGGGACGGCACTGAAGATCCATGGCATGGCCAAGGAAGGAAGCGAGAGAGAAGGGGGCATTGCCGAGACTGTGGCCATAGCCGGGGGGCTAGTGGCGAGCCCAGTGATTGGTTGGTCACTATACACCCTGAAGACAACCGGGTGCGGGCTGCCGCCGGGACCCGGGGGATCGCTCGGCGCATTGGAGGGGGTCAGCTACTTGGCAGTGGTGGGGATCGTGGGTTGGTCACTGTACACGAAGAGCAAAACTGGATCGGGGCTTCCGAATGGCCCTTTTGGGCTACTGGGCGCCGTAGAAGGTGTGTCGTACTTGTGTTTACTGGCCATTTTGGTGGTTTTTGGGGTGCAGTATTTGGAACAGGGCTACATCCCCGGCCCTCTCCCGGCCGATCAGTGCTTCGGT
mRNA sequence
CTGCAGCTGTCAGCACTCTCGTCAGTACGACCATTGCCGCTCAATCGTTTGGATTTCGCATGTAAGCCAGCGAGTTCAGGGACGGCACTGAAGATCCATGGCATGGCCAAGGAAGGAAGCGAGAGAGAAGGGGGCATTGCCGAGACTGTGGCCATAGCCGGGGGGCTAGTGGCGAGCCCAGTGATTGGTTGGTCACTATACACCCTGAAGACAACCGGGTGCGGGCTGCCGCCGGGACCCGGGGGATCGCTCGGCGCATTGGAGGGGGTCAGCTACTTGGCAGTGGTGGGGATCGTGGGTTGGTCACTGTACACGAAGAGCAAAACTGGATCGGGGCTTCCGAATGGCCCTTTTGGGCTACTGGGCGCCGTAGAAGGTGTGTCGTACTTGTGTTTACTGGCCATTTTGGTGGTTTTTGGGGTGCAGTATTTGGAACAGGGCTACATCCCCGGCCCTCTCCCGGCCGATCAGTGCTTCGGT
Coding sequence (CDS)
CTGCAGCTGTCAGCACTCTCGTCAGTACGACCATTGCCGCTCAATCGTTTGGATTTCGCATGTAAGCCAGCGAGTTCAGGGACGGCACTGAAGATCCATGGCATGGCCAAGGAAGGAAGCGAGAGAGAAGGGGGCATTGCCGAGACTGTGGCCATAGCCGGGGGGCTAGTGGCGAGCCCAGTGATTGGTTGGTCACTATACACCCTGAAGACAACCGGGTGCGGGCTGCCGCCGGGACCCGGGGGATCGCTCGGCGCATTGGAGGGGGTCAGCTACTTGGCAGTGGTGGGGATCGTGGGTTGGTCACTGTACACGAAGAGCAAAACTGGATCGGGGCTTCCGAATGGCCCTTTTGGGCTACTGGGCGCCGTAGAAGGTGTGTCGTACTTGTGTTTACTGGCCATTTTGGTGGTTTTTGGGGTGCAGTATTTGGAACAGGGCTACATCCCCGGCCCTCTCCCGGCCGATCAGTGCTTCGGT
Protein sequence
LQLSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLGAVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG
Homology
BLAST of MS010523 vs. NCBI nr
Match:
XP_038882163.1 (uncharacterized protein LOC120073396 [Benincasa hispida])
HSP 1 Score: 273.9 bits (699), Expect = 9.0e-70
Identity = 134/158 (84.81%), Postives = 146/158 (92.41%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S +R LP+NRL+ ACKPA+ T +K+ MAKEGSE EGGIAETVAIAGGLVA+PVI
Sbjct: 3 LSSSSLLRSLPVNRLNLACKPANPRTRVKVQAMAKEGSESEGGIAETVAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEG+SYLAVVGIVGWSLYTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGISYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QY EQGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. NCBI nr
Match:
XP_022950150.1 (uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 uncharacterized protein LOC111803919 [Cucurbita pepo subsp. pepo] >KAG7034154.1 hypothetical protein SDJN02_03881, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 271.6 bits (693), Expect = 4.5e-69
Identity = 135/158 (85.44%), Postives = 145/158 (91.77%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S VR LP+NRL+ CKPA+ TA+KI MAKEGSE EGGIAET+AIAGGLVA+PVI
Sbjct: 3 LSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QY EQGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. NCBI nr
Match:
KAG6603983.1 (hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 271.6 bits (693), Expect = 4.5e-69
Identity = 135/158 (85.44%), Postives = 145/158 (91.77%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S VR LP+NRL+ CKPA+ TA+KI MAKEGSE EGGIAET+AIAGGLVA+PVI
Sbjct: 3 LSSSSLVRELPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QY EQGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. NCBI nr
Match:
XP_031744055.1 (uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical protein Csa_003134 [Cucumis sativus])
HSP 1 Score: 270.8 bits (691), Expect = 7.6e-69
Identity = 133/158 (84.18%), Postives = 146/158 (92.41%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S ++ LP+NR + ACKPA+ T +K+ MAKEGSE EGGIAETVAIAGGLVA+PVI
Sbjct: 3 LSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QYL+QGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. NCBI nr
Match:
XP_008440700.1 (PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 uncharacterized protein E6C27_scaffold18G00340 [Cucumis melo var. makuwa] >TYK12631.1 uncharacterized protein E5676_scaffold255G002180 [Cucumis melo var. makuwa])
HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68
Identity = 133/158 (84.18%), Postives = 144/158 (91.14%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S +R LP+ R + ACKPA+ T +K+ MAKEGSE EGGIAETVAIAGGLVA+PVI
Sbjct: 3 LSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QY EQGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. ExPASy TrEMBL
Match:
A0A6J1GEW2 (uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC111453326 PE=4 SV=1)
HSP 1 Score: 271.6 bits (693), Expect = 2.2e-69
Identity = 135/158 (85.44%), Postives = 145/158 (91.77%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S VR LP+NRL+ CKPA+ TA+KI MAKEGSE EGGIAET+AIAGGLVA+PVI
Sbjct: 3 LSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QY EQGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. ExPASy TrEMBL
Match:
A0A0A0KKC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1)
HSP 1 Score: 270.8 bits (691), Expect = 3.7e-69
Identity = 133/158 (84.18%), Postives = 146/158 (92.41%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S ++ LP+NR + ACKPA+ T +K+ MAKEGSE EGGIAETVAIAGGLVA+PVI
Sbjct: 3 LSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QYL+QGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. ExPASy TrEMBL
Match:
A0A5A7T239 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002180 PE=4 SV=1)
HSP 1 Score: 270.0 bits (689), Expect = 6.3e-69
Identity = 133/158 (84.18%), Postives = 144/158 (91.14%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S +R LP+ R + ACKPA+ T +K+ MAKEGSE EGGIAETVAIAGGLVA+PVI
Sbjct: 3 LSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QY EQGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. ExPASy TrEMBL
Match:
A0A1S3B1A0 (uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=4 SV=1)
HSP 1 Score: 270.0 bits (689), Expect = 6.3e-69
Identity = 133/158 (84.18%), Postives = 144/158 (91.14%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S +R LP+ R + ACKPA+ T +K+ MAKEGSE EGGIAETVAIAGGLVA+PVI
Sbjct: 3 LSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QY EQGYIPGPLPADQCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of MS010523 vs. ExPASy TrEMBL
Match:
A0A6J1IN27 (uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511 PE=4 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 134/158 (84.81%), Postives = 145/158 (91.77%), Query Frame = 0
Query: 3 LSALSSVRPLPLNRLDFACKPASSGTALKIHGMAKEGSEREGGIAETVAIAGGLVASPVI 62
LS+ S VR LP+NRL+ CKPA+ TA+KI MAKEGSE EGGIAET+AIAGGLVA+PVI
Sbjct: 3 LSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATPVI 62
Query: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLG 122
GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS+YTK+KTGSGLPNGPFGLLG
Sbjct: 63 GWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGLLG 122
Query: 123 AVEGVSYLCLLAILVVFGVQYLEQGYIPGPLPADQCFG 161
AVEG+SYL LLAILVVFG+QY EQGYIPGPLPA QCFG
Sbjct: 123 AVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 160
BLAST of MS010523 vs. TAIR 10
Match:
AT3G50685.1 (unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )
HSP 1 Score: 205.7 bits (522), Expect = 2.8e-53
Identity = 98/130 (75.38%), Postives = 114/130 (87.69%), Query Frame = 0
Query: 31 KIHGMAKEGSEREGGIAETVAIAGGLVASPVIGWSLYTLKTTGCGLPPGPGGSLGALEGV 90
++ AK+ ++ GG ET AIAG LV++PVIGWSLYTLKTTGCGLPPGP G +GALEGV
Sbjct: 30 RVVAKAKDNTD-TGGFLETAAIAGSLVSTPVIGWSLYTLKTTGCGLPPGPAGLIGALEGV 89
Query: 91 SYLAVVGIVGWSLYTKSKTGSGLPNGPFGLLGAVEGVSYLCLLAILVVFGVQYLEQGYIP 150
SYL VVGIVGWSLYTK+KTGSGLPNGPFGLLGAVEG+SYL +LAILVVFG+Q+L+ G +P
Sbjct: 90 SYLVVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSVLAILVVFGIQFLDNGSVP 149
Query: 151 GPLPADQCFG 161
GPLP+DQCFG
Sbjct: 150 GPLPSDQCFG 158
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882163.1 | 9.0e-70 | 84.81 | uncharacterized protein LOC120073396 [Benincasa hispida] | [more] |
XP_022950150.1 | 4.5e-69 | 85.44 | uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 unchar... | [more] |
KAG6603983.1 | 4.5e-69 | 85.44 | hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_031744055.1 | 7.6e-69 | 84.18 | uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical ... | [more] |
XP_008440700.1 | 1.3e-68 | 84.18 | PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 unc... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GEW2 | 2.2e-69 | 85.44 | uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC1114533... | [more] |
A0A0A0KKC0 | 3.7e-69 | 84.18 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1 | [more] |
A0A5A7T239 | 6.3e-69 | 84.18 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B1A0 | 6.3e-69 | 84.18 | uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=... | [more] |
A0A6J1IN27 | 1.1e-68 | 84.81 | uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511... | [more] |
Match Name | E-value | Identity | Description | |
AT3G50685.1 | 2.8e-53 | 75.38 | unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bac... | [more] |