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MS010486 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACTCCCCTCGTTAATATTCACAGCCCCAAGAGCCCAGGATTCCCAAATCTTCACCCCCAAATTGTCTTCAACTGTTAAATCCGCTCCTTCTTCTTCTTCTTCAGTTTCTGCTTCTAAGAAGGCAATATGCAATATGGGCATTGGGCTTCTGGCTGCTTCGGTTCTGGCTCTGTCTCCCATGGATGCCAACGCAACCAGAATTGAATACTATGCGACTGTTGGGGATCCTCTATGCGAGTTCAATTATGTGCCTTCTGGGCTTGGCTATTGTGACATCGCCCTGGGTTCCGGTGAGAAAGTTCCTTATGGTGAGCTTATCAATGTCAGTTCCAATCTTCAATCATGAAGTATATTTCTCATTTTACTTTTCTTCACACCATCAAATTTGATTGTGGTTTAACATAGCTCATTGTTTCCGCTGAAATTATGTTTAATTGCTTCCTTGTAATGGGAAATTCCCTCGAATACGTAGTTTTGATAAATAGATTTATCATTATCTAATCGTTTAGGCCTTTCTGCTGAGTCCGCATGTGAAGTGTTTATGTTATGAGTTGCAAAATAAAATCTTCTGCCATTGAAAATTGTTTCAACCTTCATACAGGATTTGATGAACTGTTTTTGGCTTATATTTCCTTTCAAATGCAGGTTCATTACACTGCACGGTTTGCTGATGGGATAGTGTTTGACAGCAGCTATAAGCGTGCTAGACCTCTCACCATGCGTATTGGTGTTGGCAAGGTATTGCTTAAATTTGCAGTACGGTTTTTCAGAAGCATATGAGCTTGAAAAGTCTGTCCAACTTATTTAAGAGTGGGTGGCTACAGCATTTGGGAGCAATGATATTGATTAAGAGGACAAAGTGATCAAAAAATATATATCTGAAGTTATTGTCAACACTCAACAGAATAGCCTGTCCAGGATTGAGTTGATTGGCATTCATCTCCCAAGATATAACTATCTTCTAAGAGACCTTATTTGCAGTTAGTTTTCCCACAAATCCAATTGTTCACATGCTCAAAGATGTCGAAAGAATTGGTGGGTGTTTAATTTAATGATTTGAAAAGGAAAGAGCTGAATGAGAATGCAAGAAAGGTCTCTGTAATCAAGATCGGTGAGCAGTGGGCAGTGAAGTTTTTCCTTCTCCCGTACATAGATTATGAGGAAGATTCTACCTGCAAAACTAGCTTTTGATTTACTTGCTACCAACCATTAAGTTGACATAATAGATAAAACATTCATTAACTAACTACAGTCATTTCCCCATGTCTGAGTGTGGGTATCCGAGTAAAAAAAATTACTAACCACACTGACCCATTGGATAAGGACTAATATTCATAAGTTTGTTACCAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCTCCAATGCTAGTAGGTACGTCTACTGACAACATAAGTAGGATTTTGTGGTTTTCTTTGCTCTCTGAATGGGTTCTAAGAATTATTGCCCCACTGATTTAAGCCAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCATATGGACCAGAACCAGCAGGCTGCTTTTCAGGTCCAATTCTTTAAACCAAACAGCTTTTGTTTTGAGCCTTGGCTTTCTAAATTTGTACGACAATGTTGCAACTTATCAGTGATTGTCAGAAACTCCTTGTTGGGATTATTGCTCTAGTTTATTTTGGGGAATGCTATTTGCTAGTGTATTTGCTTTGCCTCCAGATTTGTTTTACGCTACTACGGAAACAGAAATACAAAATTACAAAGTAAACCATGGACAGTGTTAATGCCATTTGTATTGTATTGTCTTTACAGGTGACTGCAATATACCTGGCAATGCAACTCTTGTGTATGATATAAATTTCGTTGGAGTCTACTCAGGAAATAGAAAG ATGGCACTCCCCTCGTTAATATTCACAGCCCCAAGAGCCCAGGATTCCCAAATCTTCACCCCCAAATTGTCTTCAACTGTTAAATCCGCTCCTTCTTCTTCTTCTTCAGTTTCTGCTTCTAAGAAGGCAATATGCAATATGGGCATTGGGCTTCTGGCTGCTTCGGTTCTGGCTCTGTCTCCCATGGATGCCAACGCAACCAGAATTGAATACTATGCGACTGTTGGGGATCCTCTATGCGAGTTCAATTATGTGCCTTCTGGGCTTGGCTATTGTGACATCGCCCTGGGTTCCGGTGAGAAAGTTCCTTATGGTGAGCTTATCAATGTTCATTACACTGCACGGTTTGCTGATGGGATAGTGTTTGACAGCAGCTATAAGCGTGCTAGACCTCTCACCATGCGTATTGGTGTTGGCAAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCATATGGACCAGAACCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGCAATGCAACTCTTGTGTATGATATAAATTTCGTTGGAGTCTACTCAGGAAATAGAAAG ATGGCACTCCCCTCGTTAATATTCACAGCCCCAAGAGCCCAGGATTCCCAAATCTTCACCCCCAAATTGTCTTCAACTGTTAAATCCGCTCCTTCTTCTTCTTCTTCAGTTTCTGCTTCTAAGAAGGCAATATGCAATATGGGCATTGGGCTTCTGGCTGCTTCGGTTCTGGCTCTGTCTCCCATGGATGCCAACGCAACCAGAATTGAATACTATGCGACTGTTGGGGATCCTCTATGCGAGTTCAATTATGTGCCTTCTGGGCTTGGCTATTGTGACATCGCCCTGGGTTCCGGTGAGAAAGTTCCTTATGGTGAGCTTATCAATGTTCATTACACTGCACGGTTTGCTGATGGGATAGTGTTTGACAGCAGCTATAAGCGTGCTAGACCTCTCACCATGCGTATTGGTGTTGGCAAGGTAATAAGAGGATTGGATCAGGGAATATTAGGGGGTGAAGGAGTACCTCCAATGCTAGTAGGTGGCAAACGTAAGCTTCAGATTCCTCCACATTTAGCATATGGACCAGAACCAGCAGGCTGCTTTTCAGGTGACTGCAATATACCTGGCAATGCAACTCTTGTGTATGATATAAATTTCGTTGGAGTCTACTCAGGAAATAGAAAG MALPSLIFTAPRAQDSQIFTPKLSSTVKSAPSSSSSVSASKKAICNMGIGLLAASVLALSPMDANATRIEYYATVGDPLCEFNYVPSGLGYCDIALGSGEKVPYGELINVHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMLVGGKRKLQIPPHLAYGPEPAGCFSGDCNIPGNATLVYDINFVGVYSGNRK Homology
BLAST of MS010486 vs. NCBI nr
Match: XP_022133129.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Momordica charantia]) HSP 1 Score: 412.9 bits (1060), Expect = 1.6e-111 Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of MS010486 vs. NCBI nr
Match: XP_038882610.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida] >XP_038882611.1 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida] >XP_038882612.1 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida] >XP_038882613.1 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Benincasa hispida]) HSP 1 Score: 387.1 bits (993), Expect = 9.5e-104 Identity = 192/209 (91.87%), Postives = 200/209 (95.69%), Query Frame = 0
BLAST of MS010486 vs. NCBI nr
Match: XP_008440633.1 (PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440634.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >XP_008440635.1 PREDICTED: photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis melo] >KAA0036279.1 photosynthetic NDH subunit of lumenal location 4 [Cucumis melo var. makuwa] >TYK12673.1 photosynthetic NDH subunit of lumenal location 4 [Cucumis melo var. makuwa]) HSP 1 Score: 384.4 bits (986), Expect = 6.2e-103 Identity = 193/210 (91.90%), Postives = 201/210 (95.71%), Query Frame = 0
BLAST of MS010486 vs. NCBI nr
Match: XP_004143483.3 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis sativus] >XP_011657984.2 photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucumis sativus] >KAE8647562.1 hypothetical protein Csa_003906 [Cucumis sativus]) HSP 1 Score: 378.3 bits (970), Expect = 4.4e-101 Identity = 192/215 (89.30%), Postives = 199/215 (92.56%), Query Frame = 0
BLAST of MS010486 vs. NCBI nr
Match: XP_023517456.1 (photosynthetic NDH subunit of lumenal location 4, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 377.5 bits (968), Expect = 7.6e-101 Identity = 188/210 (89.52%), Postives = 199/210 (94.76%), Query Frame = 0
BLAST of MS010486 vs. ExPASy Swiss-Prot
Match: Q9SCY3 (Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL4 PE=1 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 5.7e-75 Identity = 140/220 (63.64%), Postives = 170/220 (77.27%), Query Frame = 0
BLAST of MS010486 vs. ExPASy Swiss-Prot
Match: Q9SCY2 (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP13 PE=1 SV=2) HSP 1 Score: 156.4 bits (394), Expect = 3.6e-37 Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 0
BLAST of MS010486 vs. ExPASy Swiss-Prot
Match: Q6CGG3 (FK506-binding protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FPR2 PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18 Identity = 48/104 (46.15%), Postives = 64/104 (61.54%), Query Frame = 0
BLAST of MS010486 vs. ExPASy Swiss-Prot
Match: Q54SR7 (FK506-binding protein 2 OS=Dictyostelium discoideum OX=44689 GN=fkbp2 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17 Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 0
BLAST of MS010486 vs. ExPASy Swiss-Prot
Match: Q6BP84 (FK506-binding protein 2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=FPR2 PE=3 SV=2) HSP 1 Score: 89.0 bits (219), Expect = 7.0e-17 Identity = 45/104 (43.27%), Postives = 62/104 (59.62%), Query Frame = 0
BLAST of MS010486 vs. ExPASy TrEMBL
Match: A0A6J1BV36 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111005803 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 7.9e-112 Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of MS010486 vs. ExPASy TrEMBL
Match: A0A1S3B1J6 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103484993 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103 Identity = 193/210 (91.90%), Postives = 201/210 (95.71%), Query Frame = 0
BLAST of MS010486 vs. ExPASy TrEMBL
Match: A0A5A7T4H4 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002610 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 3.0e-103 Identity = 193/210 (91.90%), Postives = 201/210 (95.71%), Query Frame = 0
BLAST of MS010486 vs. ExPASy TrEMBL
Match: A0A6J1HHY0 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111463138 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 1.1e-100 Identity = 187/210 (89.05%), Postives = 198/210 (94.29%), Query Frame = 0
BLAST of MS010486 vs. ExPASy TrEMBL
Match: A0A6J1KSN7 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111497240 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.4e-100 Identity = 186/213 (87.32%), Postives = 199/213 (93.43%), Query Frame = 0
BLAST of MS010486 vs. TAIR 10
Match: AT4G39710.1 (FK506-binding protein 16-2 ) HSP 1 Score: 282.0 bits (720), Expect = 4.0e-76 Identity = 140/220 (63.64%), Postives = 170/220 (77.27%), Query Frame = 0
BLAST of MS010486 vs. TAIR 10
Match: AT4G39710.2 (FK506-binding protein 16-2 ) HSP 1 Score: 189.5 bits (480), Expect = 2.7e-48 Identity = 98/171 (57.31%), Postives = 125/171 (73.10%), Query Frame = 0
BLAST of MS010486 vs. TAIR 10
Match: AT5G45680.1 (FK506-binding protein 13 ) HSP 1 Score: 156.4 bits (394), Expect = 2.6e-38 Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 0
BLAST of MS010486 vs. TAIR 10
Match: AT3G25220.1 (FK506-binding protein 15 kD-1 ) HSP 1 Score: 85.9 bits (211), Expect = 4.2e-17 Identity = 47/112 (41.96%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of MS010486 vs. TAIR 10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2 ) HSP 1 Score: 85.5 bits (210), Expect = 5.5e-17 Identity = 43/99 (43.43%), Postives = 57/99 (57.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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