MS010340 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACACAGTTGAGATTGAGGCCTTTAATGCTGCCGATGATCACTACTTAAACCCTAATGCAAAAGAGTGGAACCCAGTTTACGATTCCGCCCCCGAGGAAGATCGTTGCCTCTTTCTCACTTTCTCGAATGGCTACCCGCTTTCTGAGCACCAAATCGTCAACTTTTTCACCCGGTATGCCATTCCCTCGCCCTCACCCTCTTGTTTCTACGTCGTATATCTATTTGTACCATATGGGTAGGGTCCGAAATTTTCATAATCTTTCGTTTGAGACGAAGGAAAGTAGTAGAAATGATTTTAAATCCTGTAATTATTTGAAATCTAAGGGATGATTTTGAAATTGTTCATCTTGATCTTGTTTGGAGTGAAAATTATCTGTTTGGATGTTCACTGAAATAGAAAAGAAAGTAAGAAATTTACCAATAGAATCTTTAATCATGAGTTATCAATGGAAAATTAAAATATGGCTACTAAATTACTTTAGAATCGTATGAAATCCTGTAAACTTAAATTATTTTAGTTTGTACGTTTTTTTATGTACAAAAAATATTTGTATTAAAAAAAGTACGAAAAGATATTTCAAATCAAATAAGACTTCAAATCATTCTATTTAAAATTATAACAAGACAACAAATTCATTTGAAATTCCTTCGGTACCCGGAAGAAATAAACAAACTACTGGAGGTGTTAAATTATAGAGAGAGAAAAATTTTAATCTTAATTTTGTTATATGTCAATATTTGAAATTACTCAAAATCCTAAAGAAAAAATAAACAAAACCATCAAAGGTAACAAATTAGAGAAAATAATTTAAAATCTTAACCTTTTGTAGAATAATTTGTTTAGGGAGGCAACTGCCCCTCCTTCCTTCTTGGTTCTAACTTCAAACCCATTTTTTTAACAACCAAACCCTTGTTGTTGGTGTCAAAATCTCGACCTTTAATTTTTGTAATTATGACGCTTTAAATTGGAGTAGTGCTTTTATTTAGCCTCTTTATGTTATTATGCTTCTCACGTTGTCGTTGTAGGAGATACGGGCCGTGCATCGAGAGGGTGTACGTGCATTATCCAGAGGGAAGGAATCAGGCGCCATTGTTTGGGAAGGTGGTGTTCGTTGCATCTTCAATAGCAGCCATCATTTTGGGAGGGAAAGAGGAAGCCAAGTTTTCTATAGACAGCAAGACCTTGTGGTGTAAGAAATACGAGACCAAAAAAGCTCGCTCCAAGGGAACA ATGGACACAGTTGAGATTGAGGCCTTTAATGCTGCCGATGATCACTACTTAAACCCTAATGCAAAAGAGTGGAACCCAGTTTACGATTCCGCCCCCGAGGAAGATCGTTGCCTCTTTCTCACTTTCTCGAATGGCTACCCGCTTTCTGAGCACCAAATCGTCAACTTTTTCACCCGGAGATACGGGCCGTGCATCGAGAGGGTGTACGTGCATTATCCAGAGGGAAGGAATCAGGCGCCATTGTTTGGGAAGGTGGTGTTCGTTGCATCTTCAATAGCAGCCATCATTTTGGGAGGGAAAGAGGAAGCCAAGTTTTCTATAGACAGCAAGACCTTGTGGTGTAAGAAATACGAGACCAAAAAAGCTCGCTCCAAGGGAACA ATGGACACAGTTGAGATTGAGGCCTTTAATGCTGCCGATGATCACTACTTAAACCCTAATGCAAAAGAGTGGAACCCAGTTTACGATTCCGCCCCCGAGGAAGATCGTTGCCTCTTTCTCACTTTCTCGAATGGCTACCCGCTTTCTGAGCACCAAATCGTCAACTTTTTCACCCGGAGATACGGGCCGTGCATCGAGAGGGTGTACGTGCATTATCCAGAGGGAAGGAATCAGGCGCCATTGTTTGGGAAGGTGGTGTTCGTTGCATCTTCAATAGCAGCCATCATTTTGGGAGGGAAAGAGGAAGCCAAGTTTTCTATAGACAGCAAGACCTTGTGGTGTAAGAAATACGAGACCAAAAAAGCTCGCTCCAAGGGAACA MDTVEIEAFNAADDHYLNPNAKEWNPVYDSAPEEDRCLFLTFSNGYPLSEHQIVNFFTRRYGPCIERVYVHYPEGRNQAPLFGKVVFVASSIAAIILGGKEEAKFSIDSKTLWCKKYETKKARSKGT Homology
BLAST of MS010340 vs. NCBI nr
Match: KAA0048838.1 (hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa] >TYK20790.1 hypothetical protein E5676_scaffold291G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 208.8 bits (530), Expect = 2.8e-50 Identity = 96/122 (78.69%), Postives = 108/122 (88.52%), Query Frame = 0
BLAST of MS010340 vs. NCBI nr
Match: KAE8650218.1 (hypothetical protein Csa_011746 [Cucumis sativus]) HSP 1 Score: 205.3 bits (521), Expect = 3.1e-49 Identity = 94/122 (77.05%), Postives = 109/122 (89.34%), Query Frame = 0
BLAST of MS010340 vs. NCBI nr
Match: XP_023540960.1 (uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 200.7 bits (509), Expect = 7.7e-48 Identity = 93/118 (78.81%), Postives = 104/118 (88.14%), Query Frame = 0
BLAST of MS010340 vs. NCBI nr
Match: XP_022944781.1 (uncharacterized protein LOC111449194 [Cucurbita moschata] >KAG6597035.1 hypothetical protein SDJN03_10215, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199.9 bits (507), Expect = 1.3e-47 Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of MS010340 vs. NCBI nr
Match: KAG7028512.1 (hypothetical protein SDJN02_09693, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 192.6 bits (488), Expect = 2.1e-45 Identity = 93/126 (73.81%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of MS010340 vs. ExPASy TrEMBL
Match: A0A5A7U0U8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00510 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50 Identity = 96/122 (78.69%), Postives = 108/122 (88.52%), Query Frame = 0
BLAST of MS010340 vs. ExPASy TrEMBL
Match: A0A6J1FZ16 (uncharacterized protein LOC111449194 OS=Cucurbita moschata OX=3662 GN=LOC111449194 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 6.4e-48 Identity = 93/118 (78.81%), Postives = 103/118 (87.29%), Query Frame = 0
BLAST of MS010340 vs. ExPASy TrEMBL
Match: A0A6J1E9T6 (uncharacterized protein LOC111432088 OS=Cucurbita moschata OX=3662 GN=LOC111432088 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 6.6e-45 Identity = 89/122 (72.95%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of MS010340 vs. ExPASy TrEMBL
Match: A0A6J1IWW8 (uncharacterized protein LOC111479214 OS=Cucurbita maxima OX=3661 GN=LOC111479214 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.3e-44 Identity = 88/122 (72.13%), Postives = 103/122 (84.43%), Query Frame = 0
BLAST of MS010340 vs. ExPASy TrEMBL
Match: A0A0A0L3N4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118030 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 2.1e-43 Identity = 89/122 (72.95%), Postives = 102/122 (83.61%), Query Frame = 0
BLAST of MS010340 vs. TAIR 10
Match: AT5G13620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 1.2e-14 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of MS010340 vs. TAIR 10
Match: AT1G49290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 8.6e-13 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of MS010340 vs. TAIR 10
Match: AT1G64870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 1.5e-12 Identity = 39/112 (34.82%), Postives = 62/112 (55.36%), Query Frame = 0
BLAST of MS010340 vs. TAIR 10
Match: AT3G45200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 95 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 6.1e-11 Identity = 33/102 (32.35%), Postives = 56/102 (54.90%), Query Frame = 0
BLAST of MS010340 vs. TAIR 10
Match: AT5G11220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 8.9e-10 Identity = 31/98 (31.63%), Postives = 54/98 (55.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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