MS010339 (gene) Bitter gourd (TR) v1

Overview


Name	MS010339
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ethylene-responsive transcription factor ERF038-like
Location	scaffold878: 332900 .. 333577 (-)
RNA-Seq Expression	MS010339
Synteny	MS010339

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCATATTTCAATTACATAGAAGCATCTGATTCTAAAGCAAGCAGCTTTTCAAAGTCTTCCTCTATCCCTAGCCATGGCGACCAAGTTTCGCAGAAGAAAAAACAGAGGACTGCTGAACAGGACAGCGCCCACCAAATGTTCAGAGGAGTGAGGAAGAGAAATTGGGGAAAATGGGTCTCTGAGATACGGGAGCCGAGGAAGAAGACGAGAATTTGGCTTGGAACTTACCCAACGGCGGAAATGGCAGCGCGGGCTCACGACGCTGCGGCGCTCGCCGTTAAGGGTCGCTCTGCATTTCTCAATTTCCCTGAACTTGCCCAATTCCTTCCTCGCCCGCTCTCCAAGTCCCACAAGGACATTCAGGCCGCCGCGGCCGAGGCGGCGGCCGCCACATTTTCAGCCGGAAACGACCGTGAAGCCGACGGAGGCGGAGCGGCGGAGCGCAGCCAACCCCTGTTTTCCGGTAGCCCCGGCGGAGAGAGAACAGAGGACTCCACGGACTCCCCCTCGACCGCCGCCGTTGATGACGCATTTTTCGATCTGCCGGATCTCTTCGTCGGAAGTTCGTATTTGAAAGATGGGTTTCTTTATCATTCTTCGTTATGGCAGTTCTGTGGGGCGGCCGATCACACTGGTTATCGGCTCGAGGAGCCTTCATTCTGGGAACGAATT

mRNA sequence

ATGGAAGCATATTTCAATTACATAGAAGCATCTGATTCTAAAGCAAGCAGCTTTTCAAAGTCTTCCTCTATCCCTAGCCATGGCGACCAAGTTTCGCAGAAGAAAAAACAGAGGACTGCTGAACAGGACAGCGCCCACCAAATGTTCAGAGGAGTGAGGAAGAGAAATTGGGGAAAATGGGTCTCTGAGATACGGGAGCCGAGGAAGAAGACGAGAATTTGGCTTGGAACTTACCCAACGGCGGAAATGGCAGCGCGGGCTCACGACGCTGCGGCGCTCGCCGTTAAGGGTCGCTCTGCATTTCTCAATTTCCCTGAACTTGCCCAATTCCTTCCTCGCCCGCTCTCCAAGTCCCACAAGGACATTCAGGCCGCCGCGGCCGAGGCGGCGGCCGCCACATTTTCAGCCGGAAACGACCGTGAAGCCGACGGAGGCGGAGCGGCGGAGCGCAGCCAACCCCTGTTTTCCGGTAGCCCCGGCGGAGAGAGAACAGAGGACTCCACGGACTCCCCCTCGACCGCCGCCGTTGATGACGCATTTTTCGATCTGCCGGATCTCTTCGTCGGAAGTTCGTATTTGAAAGATGGGTTTCTTTATCATTCTTCGTTATGGCAGTTCTGTGGGGCGGCCGATCACACTGGTTATCGGCTCGAGGAGCCTTCATTCTGGGAACGAATT

Coding sequence (CDS)

ATGGAAGCATATTTCAATTACATAGAAGCATCTGATTCTAAAGCAAGCAGCTTTTCAAAGTCTTCCTCTATCCCTAGCCATGGCGACCAAGTTTCGCAGAAGAAAAAACAGAGGACTGCTGAACAGGACAGCGCCCACCAAATGTTCAGAGGAGTGAGGAAGAGAAATTGGGGAAAATGGGTCTCTGAGATACGGGAGCCGAGGAAGAAGACGAGAATTTGGCTTGGAACTTACCCAACGGCGGAAATGGCAGCGCGGGCTCACGACGCTGCGGCGCTCGCCGTTAAGGGTCGCTCTGCATTTCTCAATTTCCCTGAACTTGCCCAATTCCTTCCTCGCCCGCTCTCCAAGTCCCACAAGGACATTCAGGCCGCCGCGGCCGAGGCGGCGGCCGCCACATTTTCAGCCGGAAACGACCGTGAAGCCGACGGAGGCGGAGCGGCGGAGCGCAGCCAACCCCTGTTTTCCGGTAGCCCCGGCGGAGAGAGAACAGAGGACTCCACGGACTCCCCCTCGACCGCCGCCGTTGATGACGCATTTTTCGATCTGCCGGATCTCTTCGTCGGAAGTTCGTATTTGAAAGATGGGTTTCTTTATCATTCTTCGTTATGGCAGTTCTGTGGGGCGGCCGATCACACTGGTTATCGGCTCGAGGAGCCTTCATTCTGGGAACGAATT

Protein sequence

MEAYFNYIEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGERTEDSTDSPSTAAVDDAFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI

Homology

[Close]

BLAST of MS010339 vs. NCBI nr
Match: XP_022151464.1 (ethylene-responsive transcription factor ERF038-like [Momordica charantia])

HSP 1 Score: 436.0 bits (1120), Expect = 1.9e-118
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKW 60
           MEAYFNYIEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKW
Sbjct: 1   MEAYFNYIEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKW 60

Query: 61  VSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHK 120
           VSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHK
Sbjct: 61  VSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHK 120

Query: 121 DIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGERTEDSTDSPSTAAVDDAF 180
           DIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGG+RTEDSTDSPSTAAVDDAF
Sbjct: 121 DIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGDRTEDSTDSPSTAAVDDAF 180

Query: 181 FDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
           FDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEE SFWERI
Sbjct: 181 FDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEELSFWERI 226

[Close]

BLAST of MS010339 vs. NCBI nr
Match: XP_022944766.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita moschata])

HSP 1 Score: 330.1 bits (845), Expect = 1.5e-86
Identity = 175/230 (76.09%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSI-PSHGD-QVSQKKKQRTAEQD--SAHQMFRGVRKRN 60
           ME +FNYI+ASD+K +    SSS+  SHG+  +S   KQRT+E++  S H MFRGVRKRN
Sbjct: 28  MEPFFNYIQASDAKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRN 87

Query: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLS 120
           WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALA+KG SAFLNFPELA+FLPRPLS
Sbjct: 88  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLS 147

Query: 121 KSHKDIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGERTEDSTDSPSTAAV 180
           KSHKDIQAAAA+AAA TFS GN+RE +G  AAE  + LFSGS GGER EDST+SPSTAA 
Sbjct: 148 KSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMETLFSGSDGGERAEDSTNSPSTAAS 207

Query: 181 DDAFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
           D+  FDLPDLFVGSS LKDGFL HSSLWQFC AADH+G+RLEEPSFWE I
Sbjct: 208 DETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI 257

[Close]

BLAST of MS010339 vs. NCBI nr
Match: KAG6597034.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028511.1 Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.1 bits (845), Expect = 1.5e-86
Identity = 175/230 (76.09%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSI-PSHGD-QVSQKKKQRTAEQD--SAHQMFRGVRKRN 60
           ME +FNYI+ASD+K +    SSS+  SHG+  +S   KQRT+E++  S H MFRGVRKRN
Sbjct: 1   MEPFFNYIQASDAKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRN 60

Query: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLS 120
           WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALA+KG SAFLNFPELA+FLPRPLS
Sbjct: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLS 120

Query: 121 KSHKDIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGERTEDSTDSPSTAAV 180
           KSHKDIQAAAA+AAA TFS GN+RE +G  AAE  + LFSGS GGER EDST+SPSTAA 
Sbjct: 121 KSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMETLFSGSDGGERAEDSTNSPSTAAS 180

Query: 181 DDAFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
           D+  FDLPDLFVGSS LKDGFL HSSLWQFC AADH+G+RLEEPSFWE I
Sbjct: 181 DETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI 230

[Close]

BLAST of MS010339 vs. NCBI nr
Match: XP_023539113.1 (ethylene-responsive transcription factor ERF038-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 3.3e-86
Identity = 175/230 (76.09%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSI-PSHGD-QVSQKKKQRTAEQD--SAHQMFRGVRKRN 60
           ME +FNYI+ASD+K +    SSS+  SHG+  +S   KQRT+E++  S H MFRGVRKRN
Sbjct: 20  MEPFFNYIQASDAKPTIICSSSSVATSHGNGHISGNTKQRTSEEEDKSHHNMFRGVRKRN 79

Query: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLS 120
           WGKWVSEIREP+KKTRIWLGTYPTAEMAARAHDAAALA+KG SAFLNFPELA+FLPRPLS
Sbjct: 80  WGKWVSEIREPKKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLS 139

Query: 121 KSHKDIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGERTEDSTDSPSTAAV 180
           KSHKDIQAAAA+AAA TFS GN+RE +G  AAE  + LFSGS GGER EDST+SPSTAA 
Sbjct: 140 KSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMETLFSGSDGGERAEDSTNSPSTAAS 199

Query: 181 DDAFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
           D+ FFDLPDLFVGSS LKDGFL HSSLWQFC AADH+G RLEEPSFWE I
Sbjct: 200 DETFFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGLRLEEPSFWETI 249

[Close]

BLAST of MS010339 vs. NCBI nr
Match: XP_038902557.1 (ethylene-responsive transcription factor ERF034-like [Benincasa hispida])

HSP 1 Score: 326.2 bits (835), Expect = 2.2e-85
Identity = 171/228 (75.00%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSIPS-HGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGK 60
           ME + NYIEASD+KA++F  S+SI +   +QVS+K+KQR+ +++  H MFRGVRKRNWGK
Sbjct: 1   MEPFLNYIEASDAKATTFCNSASITTFEYEQVSEKRKQRSTQENRDHPMFRGVRKRNWGK 60

Query: 61  WVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSH 120
           WVSEIREPRKKTRIWLGTYPT EMAARAHDAAALA+KG+SAFLNFPELAQFLPRPLSKSH
Sbjct: 61  WVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGQSAFLNFPELAQFLPRPLSKSH 120

Query: 121 KDIQAAAAEAAAATFSAGNDREADGGGA-AERSQPLFSGSPGGERTEDSTDSPSTAAVDD 180
           KDIQAAAA+AAAATFSAG+  E  GG A  E  +PLFSGS GG+RTEDST+S +TAA D+
Sbjct: 121 KDIQAAAAQAAAATFSAGSTGEGGGGEAEGENREPLFSGSDGGDRTEDSTNSLTTAAGDE 180

Query: 181 AFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
             FDLPDLF GSS LKDGF+YHSSLWQ C AADH G+RLEEPSFWE I
Sbjct: 181 TLFDLPDLFAGSSDLKDGFVYHSSLWQLCAAADHNGFRLEEPSFWELI 228

[Close]

BLAST of MS010339 vs. ExPASy Swiss-Prot
Match: Q8LBQ7 (Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 GN=ERF034 PE=2 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 8.4e-40
Identity = 113/242 (46.69%), Postives = 136/242 (56.20%), Query Frame = 0


Query: 6   NYIEASDSKAS----SFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKWV 65
           N+IE  +SK      S S   S+    DQ     K+R       H  +RGVR R+WGKWV
Sbjct: 53  NFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRGVRMRSWGKWV 112

Query: 66  SEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKD 125
           SEIREPRKK+RIWLGTYPTAEMAARAHD AALA+KG +A+LNFP+LA  LPRP++ S KD
Sbjct: 113 SEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKD 172

Query: 126 IQAAAAEAAAATFSAGNDREADGGGAAERSQP-------LFSGSPGGERTEDSTD----- 185
           IQAAA+ AA     + ND           ++P       LFS       T  S +     
Sbjct: 173 IQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQSQEYSEAS 232

Query: 186 SPSTAAVDD------AFFDLPDLFVGSSYL---KDGFLYHSSLWQFCGAADHTGYRLEEP 223
             ST+A  D        FDLPDLF   + +    D F Y+SS WQ CGA    G+RLEEP
Sbjct: 233 CASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA--DAGFRLEEP 292

[Close]

BLAST of MS010339 vs. ExPASy Swiss-Prot
Match: Q9M210 (Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 GN=ERF035 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 8.1e-35
Identity = 104/226 (46.02%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 8   IEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKWVSEIREP 67
           +  S S + S SK S +  + D   +++K   ++ +     +RGVR R+WGKWVSEIREP
Sbjct: 31  VVTSSSDSWSTSKRSLVQDN-DSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREP 90

Query: 68  RKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAA 127
           RKK+RIWLGTYPTAEMAARAHD AALA+KG S FLNFPEL+  LPRP+S S KDIQAAA 
Sbjct: 91  RKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAAT 150

Query: 128 EAAAATF---SAGNDREADGGGAAE---RSQPLFSGSPGGERTEDSTDSPSTAAVDDAFF 187
           +AA AT       + + AD    +E    +Q   S S         T S    + ++  F
Sbjct: 151 KAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVF 210

Query: 188 DLPDLFV-GSSYLKDGFLYHSS--LWQFCGAADHTGYRLEEPSFWE 225
           DLPDLF  G     D F   +    WQ  G  D  G+R EEP  W+
Sbjct: 211 DLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEED-VGFRFEEPFNWQ 254

[Close]

BLAST of MS010339 vs. ExPASy Swiss-Prot
Match: Q9ZQP3 (Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 GN=ERF038 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.4e-34
Identity = 94/175 (53.71%), Postives = 110/175 (62.86%), Query Frame = 0


Query: 30  QVSQKKKQRTAEQD------SAHQMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEM 89
           +V  K K++ A+ D      S H  FRGVR R WGKWVSEIREP+KK+RIWLGT+ TAEM
Sbjct: 20  RVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEM 79

Query: 90  AARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAAEAAAATFSAGNDREAD 149
           AARAHD AALA+KG SA LNFPELA  LPRP S   KDIQAAAA AAAA      D + +
Sbjct: 80  AARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAAA---VAIDMDVE 139

Query: 150 GGGAAERSQPLFSGSPGGERTEDSTDSPSTAAV-DDAFFDLPDLFVGSSYLKDGF 198
                       + SP    T   T SP+  A+ DDAF DLPDL +  ++  DGF
Sbjct: 140 ------------TSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLNVNHNIDGF 179

[Close]

BLAST of MS010339 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-31
Identity = 85/172 (49.42%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 24  IPSHGDQV---SQKKKQRTAEQDSAHQMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPT 83
           + SHG      S+KKK++T E+     ++RG R R+WGKWVSEIREPRKK+RIWLGT+PT
Sbjct: 2   VDSHGSDTECSSKKKKEKTKEKG----VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPT 61

Query: 84  AEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAAEAAAATFSAGNDR 143
           AEMAARAHD AAL++KG SA LNFPELA FLPRP+S S +DIQAAAAEAA   F      
Sbjct: 62  AEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFH 121

Query: 144 EADGGGA------AERSQPLFSGSPGGERTEDSTDSPSTAAVDDAFFDLPDL 187
             D           E+ +   S S     +  S+ S S++ +     D+ +L
Sbjct: 122 LQDDSTPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVEL 169

[Close]

BLAST of MS010339 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.0e-30
Identity = 67/112 (59.82%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 19  SKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKWVSEIREPRKKTRIWLGTY 78
           S+S S+         +KK +       H ++RGVR RNWGKWVSEIREPRKK+RIWLGT+
Sbjct: 21  SESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 80

Query: 79  PTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAAEAA 131
           PT EMAARAHD AAL++KG +A LNFPELA   PRP+S S +DIQ AA +AA
Sbjct: 81  PTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAA 132

[Close]

BLAST of MS010339 vs. ExPASy TrEMBL
Match: A0A6J1DD62 (ethylene-responsive transcription factor ERF038-like OS=Momordica charantia OX=3673 GN=LOC111019390 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.4e-119
Identity = 224/226 (99.12%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKW 60
           MEAYFNYIEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKW
Sbjct: 1   MEAYFNYIEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKW 60

Query: 61  VSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHK 120
           VSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHK
Sbjct: 61  VSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHK 120

Query: 121 DIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGERTEDSTDSPSTAAVDDAF 180
           DIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGG+RTEDSTDSPSTAAVDDAF
Sbjct: 121 DIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGDRTEDSTDSPSTAAVDDAF 180

Query: 181 FDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
           FDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEE SFWERI
Sbjct: 181 FDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEELSFWERI 226

[Close]

BLAST of MS010339 vs. ExPASy TrEMBL
Match: A0A6J1FZ02 (ethylene-responsive transcription factor ERF038-like OS=Cucurbita moschata OX=3662 GN=LOC111449118 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 7.2e-87
Identity = 175/230 (76.09%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSI-PSHGD-QVSQKKKQRTAEQD--SAHQMFRGVRKRN 60
           ME +FNYI+ASD+K +    SSS+  SHG+  +S   KQRT+E++  S H MFRGVRKRN
Sbjct: 28  MEPFFNYIQASDAKETIICSSSSVATSHGNGHISDNTKQRTSEEEDKSHHNMFRGVRKRN 87

Query: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLS 120
           WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALA+KG SAFLNFPELA+FLPRPLS
Sbjct: 88  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLS 147

Query: 121 KSHKDIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGERTEDSTDSPSTAAV 180
           KSHKDIQAAAA+AAA TFS GN+RE +G  AAE  + LFSGS GGER EDST+SPSTAA 
Sbjct: 148 KSHKDIQAAAAQAAATTFSEGNNREGEGREAAENMETLFSGSDGGERAEDSTNSPSTAAS 207

Query: 181 DDAFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
           D+  FDLPDLFVGSS LKDGFL HSSLWQFC AADH+G+RLEEPSFWE I
Sbjct: 208 DETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWESI 257

[Close]

BLAST of MS010339 vs. ExPASy TrEMBL
Match: A0A6J1IFN1 (ethylene-responsive transcription factor ERF038-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472880 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.3e-85
Identity = 174/230 (75.65%), Postives = 194/230 (84.35%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSI-PSHGD-QVSQKKKQRTAEQD--SAHQMFRGVRKRN 60
           ME +FNYIEASD+KA+    SSS+  SHG+  +S  +KQ  +E++  S H MFRGVRKRN
Sbjct: 23  MEPFFNYIEASDAKATIICSSSSVATSHGNGHISGNRKQSASEEEDKSHHNMFRGVRKRN 82

Query: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLS 120
           WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALA+KG SAFLNFPELA+FLPRPLS
Sbjct: 83  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAIKGHSAFLNFPELARFLPRPLS 142

Query: 121 KSHKDIQAAAAEAAAATFSAGNDREADGGGAAERSQPLFSGSPGGERTEDSTDSPSTAAV 180
           KSHKDIQAAAA+AAA TFS  N+RE +G  AAE  + LFSGS GGER EDST+SPSTAA 
Sbjct: 143 KSHKDIQAAAAQAAATTFSERNNREDEGREAAENMETLFSGSDGGERAEDSTNSPSTAAS 202

Query: 181 DDAFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
           D+  FDLPDLFVGSS LKDGFL HSSLWQFC AADH+G+RLEEPSFWE I
Sbjct: 203 DETLFDLPDLFVGSSDLKDGFLCHSSLWQFCAAADHSGFRLEEPSFWEPI 252

[Close]

BLAST of MS010339 vs. ExPASy TrEMBL
Match: A0A0A0L8C6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G118010 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.4e-84
Identity = 175/230 (76.09%), Postives = 191/230 (83.04%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSIPSHGD--QVSQKKKQRTA-EQDSAHQMFRGVRKRNW 60
           ME  FNYIEASD+KA+SFS S SI +H +  QVS   KQ T  +Q+  H MFRGVRKRNW
Sbjct: 1   MEPIFNYIEASDAKANSFSHSPSITTHHEYQQVSHNTKQTTTIQQNRHHPMFRGVRKRNW 60

Query: 61  GKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSK 120
           GKWVSEIREPRKKTRIWLGTYPT EMAARAHDAAALA+KGRSAFLNFPELAQFLPRPLS+
Sbjct: 61  GKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGRSAFLNFPELAQFLPRPLSR 120

Query: 121 SHKDIQAAAAEAAAATFSAGNDREADGGGAAERS-QPLFSGSPGGERTEDSTDSPSTAAV 180
           SHKDIQAAAA+AAAATFSAG + E+ G  A E S + LF GS GGERTEDST+S ST A 
Sbjct: 121 SHKDIQAAAAQAAAATFSAGINAESGGEEAVEESREALFPGSDGGERTEDSTNSTSTVAG 180

Query: 181 DDAFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
           D+  FDLPDL +GSS LKDGF+YHSSLWQFC AADH GYRLEEPSFWE I
Sbjct: 181 DETLFDLPDLVMGSSDLKDGFVYHSSLWQFCAAADHNGYRLEEPSFWELI 230

[Close]

BLAST of MS010339 vs. ExPASy TrEMBL
Match: A0A5A7U3G9 (Ethylene-responsive transcription factor ERF038-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00500 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.2e-83
Identity = 171/231 (74.03%), Postives = 192/231 (83.12%), Query Frame = 0


Query: 1   MEAYFNYIEASDSKASSFSKSSSIPSHGDQ---VSQKKKQRTA-EQDSAHQMFRGVRKRN 60
           ME +FNYIEASD+KA+SFS S SI +H +     S+  KQRT  +++  H MFRGVRKRN
Sbjct: 1   MEPFFNYIEASDAKATSFSHSPSITTHHEYQHLSSKNTKQRTTIQRNRDHPMFRGVRKRN 60

Query: 61  WGKWVSEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLS 120
           WGKWVSEIREPRKKTRIWLGTYPT EMAARAHDAAALA+KG SAFLNFPELAQFLPRPLS
Sbjct: 61  WGKWVSEIREPRKKTRIWLGTYPTPEMAARAHDAAALAIKGHSAFLNFPELAQFLPRPLS 120

Query: 121 KSHKDIQAAAAEAAAATFSAGNDREADGGGAAERS-QPLFSGSPGGERTEDSTDSPSTAA 180
           +SHKDIQAAAA+AAAATFS+G + E+ G  A E S +PLF GS GGERTEDST+SPST A
Sbjct: 121 RSHKDIQAAAAQAAAATFSSGINAESGGEEAVEESREPLFPGSDGGERTEDSTNSPSTIA 180

Query: 181 VDDAFFDLPDLFVGSSYLKDGFLYHSSLWQFCGAADHTGYRLEEPSFWERI 227
            D+  FDLPDL +GSS  KDGF+YHSSLWQFC AADH G+RLEEPSFWE I
Sbjct: 181 GDETLFDLPDLVIGSSDSKDGFVYHSSLWQFCAAADHNGFRLEEPSFWELI 231

[Close]

BLAST of MS010339 vs. TAIR 10
Match: AT2G44940.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 5.9e-41
Identity = 113/242 (46.69%), Postives = 136/242 (56.20%), Query Frame = 0


Query: 6   NYIEASDSKAS----SFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKWV 65
           N+IE  +SK      S S   S+    DQ     K+R       H  +RGVR R+WGKWV
Sbjct: 53  NFIEEDNSKRKASRRSLSSLVSVEDDDDQNGGGGKRRKTNGGDKHPTYRGVRMRSWGKWV 112

Query: 66  SEIREPRKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKD 125
           SEIREPRKK+RIWLGTYPTAEMAARAHD AALA+KG +A+LNFP+LA  LPRP++ S KD
Sbjct: 113 SEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGTTAYLNFPKLAGELPRPVTNSPKD 172

Query: 126 IQAAAAEAAAATFSAGNDREADGGGAAERSQP-------LFSGSPGGERTEDSTD----- 185
           IQAAA+ AA     + ND           ++P       LFS       T  S +     
Sbjct: 173 IQAAASLAAVNWQDSVNDVSNSEVAEIVEAEPSRAVVAQLFSSDTSTTTTTQSQEYSEAS 232

Query: 186 SPSTAAVDD------AFFDLPDLFVGSSYL---KDGFLYHSSLWQFCGAADHTGYRLEEP 223
             ST+A  D        FDLPDLF   + +    D F Y+SS WQ CGA    G+RLEEP
Sbjct: 233 CASTSACTDKDSEEEKLFDLPDLFTDENEMMIRNDAFCYYSSTWQLCGA--DAGFRLEEP 292

[Close]

BLAST of MS010339 vs. TAIR 10
Match: AT3G60490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 5.8e-36
Identity = 104/226 (46.02%), Postives = 131/226 (57.96%), Query Frame = 0


Query: 8   IEASDSKASSFSKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKWVSEIREP 67
           +  S S + S SK S +  + D   +++K   ++ +     +RGVR R+WGKWVSEIREP
Sbjct: 31  VVTSSSDSWSTSKRSLVQDN-DSGGKRRKSNVSDDNKNPTSYRGVRMRSWGKWVSEIREP 90

Query: 68  RKKTRIWLGTYPTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAA 127
           RKK+RIWLGTYPTAEMAARAHD AALA+KG S FLNFPEL+  LPRP+S S KDIQAAA 
Sbjct: 91  RKKSRIWLGTYPTAEMAARAHDVAALAIKGNSGFLNFPELSGLLPRPVSCSPKDIQAAAT 150

Query: 128 EAAAATF---SAGNDREADGGGAAE---RSQPLFSGSPGGERTEDSTDSPSTAAVDDAFF 187
           +AA AT       + + AD    +E    +Q   S S         T S    + ++  F
Sbjct: 151 KAAEATTWHKPVIDKKLADELSHSELLSTAQSSTSSSFVFSSDTSETSSTDKESNEETVF 210

Query: 188 DLPDLFV-GSSYLKDGFLYHSS--LWQFCGAADHTGYRLEEPSFWE 225
           DLPDLF  G     D F   +    WQ  G  D  G+R EEP  W+
Sbjct: 211 DLPDLFTDGLMNPNDAFCLCNGTFTWQLYGEED-VGFRFEEPFNWQ 254

[Close]

BLAST of MS010339 vs. TAIR 10
Match: AT2G35700.1 (ERF family protein 38 )

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35
Identity = 94/175 (53.71%), Postives = 110/175 (62.86%), Query Frame = 0


Query: 30  QVSQKKKQRTAEQD------SAHQMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPTAEM 89
           +V  K K++ A+ D      S H  FRGVR R WGKWVSEIREP+KK+RIWLGT+ TAEM
Sbjct: 20  RVKYKPKKKRAKDDDDEKVVSKHPNFRGVRMRQWGKWVSEIREPKKKSRIWLGTFSTAEM 79

Query: 90  AARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAAEAAAATFSAGNDREAD 149
           AARAHD AALA+KG SA LNFPELA  LPRP S   KDIQAAAA AAAA      D + +
Sbjct: 80  AARAHDVAALAIKGGSAHLNFPELAYHLPRPASADPKDIQAAAAAAAAA---VAIDMDVE 139

Query: 150 GGGAAERSQPLFSGSPGGERTEDSTDSPSTAAV-DDAFFDLPDLFVGSSYLKDGF 198
                       + SP    T   T SP+  A+ DDAF DLPDL +  ++  DGF
Sbjct: 140 ------------TSSPSPSPTVTETSSPAMIALSDDAFSDLPDLLLNVNHNIDGF 179

[Close]

BLAST of MS010339 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 1.3e-32
Identity = 85/172 (49.42%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 24  IPSHGDQV---SQKKKQRTAEQDSAHQMFRGVRKRNWGKWVSEIREPRKKTRIWLGTYPT 83
           + SHG      S+KKK++T E+     ++RG R R+WGKWVSEIREPRKK+RIWLGT+PT
Sbjct: 2   VDSHGSDTECSSKKKKEKTKEKG----VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPT 61

Query: 84  AEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAAEAAAATFSAGNDR 143
           AEMAARAHD AAL++KG SA LNFPELA FLPRP+S S +DIQAAAAEAA   F      
Sbjct: 62  AEMAARAHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFH 121

Query: 144 EADGGGA------AERSQPLFSGSPGGERTEDSTDSPSTAAVDDAFFDLPDL 187
             D           E+ +   S S     +  S+ S S++ +     D+ +L
Sbjct: 122 LQDDSTPLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVEL 169

[Close]

BLAST of MS010339 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-31
Identity = 67/112 (59.82%), Postives = 81/112 (72.32%), Query Frame = 0


Query: 19  SKSSSIPSHGDQVSQKKKQRTAEQDSAHQMFRGVRKRNWGKWVSEIREPRKKTRIWLGTY 78
           S+S S+         +KK +       H ++RGVR RNWGKWVSEIREPRKK+RIWLGT+
Sbjct: 21  SESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 80

Query: 79  PTAEMAARAHDAAALAVKGRSAFLNFPELAQFLPRPLSKSHKDIQAAAAEAA 131
           PT EMAARAHD AAL++KG +A LNFPELA   PRP+S S +DIQ AA +AA
Sbjct: 81  PTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAA 132

The following BLAST results are available for this feature:

BLAST of MS010339 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151464.1	1.9e-118	99.12	ethylene-responsive transcription factor ERF038-like [Momordica charantia]	[more]
XP_022944766.1	1.5e-86	76.09	ethylene-responsive transcription factor ERF038-like [Cucurbita moschata]	[more]
KAG6597034.1	1.5e-86	76.09	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023539113.1	3.3e-86	76.09	ethylene-responsive transcription factor ERF038-like [Cucurbita pepo subsp. pepo...	[more]
XP_038902557.1	2.2e-85	75.00	ethylene-responsive transcription factor ERF034-like [Benincasa hispida]	[more]

BLAST of MS010339 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LBQ7	8.4e-40	46.69	Ethylene-responsive transcription factor ERF034 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9M210	8.1e-35	46.02	Ethylene-responsive transcription factor ERF035 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZQP3	2.4e-34	53.71	Ethylene-responsive transcription factor ERF038 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q52QU1	1.9e-31	49.42	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LYD3	6.0e-30	59.82	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of MS010339 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DD62	9.4e-119	99.12	ethylene-responsive transcription factor ERF038-like OS=Momordica charantia OX=3...	[more]
A0A6J1FZ02	7.2e-87	76.09	ethylene-responsive transcription factor ERF038-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1IFN1	2.3e-85	75.65	ethylene-responsive transcription factor ERF038-like isoform X1 OS=Cucurbita max...	[more]
A0A0A0L8C6	3.4e-84	76.09	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G118010 PE=...	[more]
A0A5A7U3G9	2.2e-83	74.03	Ethylene-responsive transcription factor ERF038-like protein OS=Cucumis melo var...	[more]

BLAST of MS010339 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44940.1	5.9e-41	46.69	Integrase-type DNA-binding superfamily protein	[more]
AT3G60490.1	5.8e-36	46.02	Integrase-type DNA-binding superfamily protein	[more]
AT2G35700.1	1.7e-35	53.71	ERF family protein 38	[more]
AT2G25820.1	1.3e-32	49.42	Integrase-type DNA-binding superfamily protein	[more]
AT5G11590.1	4.3e-31	59.82	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 49..60 score: 65.91 coord: 71..87 score: 67.06
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 48..111 e-value: 1.1E-33 score: 127.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 49..97 e-value: 1.2E-13 score: 51.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 48..105 score: 23.538157
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 49..107 e-value: 9.50223E-20 score: 77.6971
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 48..106 e-value: 5.7E-25 score: 89.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..173
None	No IPR available	PANTHER	PTHR31985:SF130	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF043	coord: 14..202
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 14..202
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 48..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010339.1	MS010339.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity