MS010306 (gene) Bitter gourd (TR) v1

Overview
NameMS010306
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein arv1 homolog
Locationscaffold878: 49897 .. 51958 (+)
RNA-Seq ExpressionMS010306
SyntenyMS010306
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCGATTGTGTCCAGAATTCGCCGATGGGAAGGGAAACAAAGGTGAATCGTTGTGTTCAGTGTGGATTTGGAACGAATCAACTGTTTGTTCAGTACTCACCCGGCAATATACGTCTTATGAAATGCGTACGCTTGTATCGAGTTTTCCCTTCTACCTCTCTGTTTACGTGCTCTTTAAATCAATGTTTCTTTGTGAAATTCTCACGCTTCTTAATGTTATAAAGGGCAATTGCGAATCCATTGCAGACGAATACATCGAGTGCGAAGCGATGGTGAATTGCCCACTCCTTCATTACTATTATTGTATTCTTTTATGCTTTCTTTCTATCCATTTGATTATGCAATTACTTCGTCTGAGGACTATACGTTTTCAAGTGGTAGATTGTACTAATCGATTTGATACTGCACAAGCCCCAGGCCTACAGACATTTGCTCTACAACGTACTTAATAGAGATCGTCTGTCTTGTCAGGTTCGCGCCCATTTGCTTCATTTCCCACACATGCACCAAAGAAAATGTAATGGACAATTGTAATTATCATTTCATATGATAGGTGATAGCTTGTTCGCCATTTCCTTCTGCTTCACGAGTATTTGTTCAGTAAACCCTGTTTGAATATCATTTAGTAAGATGGTTTTTTTAATTATTATATAAAGGGCTTTTCTATGTAGTAACGGGGAGAATTTGTATAGTGCTACTATAGTACCTACTCCTTCCATTCATACTTTGACACATTATTAAGTAATATATAATATTATTTAATAGGACCACACTATTCTTAAGTGCTGCTTTAATGGCCAACAATGAATTAATGTATACTGTATGAAACTTTTAATGGCCAAGAATTCCATACTATACAGGTACCAGAATTTTTTCTAGTAAGGAGGAGTCCTCAAATCAACGGGGAATTATACCTTTCCTTACAGTCGTTTCCACTTTCCAGATACTAATAAGTAATACGGTAATTTATTTCACTCTCTTGTAGGATTTAATGTGGAAGTTCGCTCTGAGTTTTCTTCTTTTGGATGCTTGTATCCAATTCCGTTGGGAAGTCTCCACTCAGGGGATGCCTTGTCCAGTTGTCCTCGTACTTTACTATTGAAATCATTCTTTTTTCTTTTGACATATGGTATAATATCTAGATTGAGTGCCTTAACAGCAATCAATTAGACAGGTGTATGCTTCTGAGACTAAGTGACATACAAGGAAATTCATCTTTGAGCTTTTCATCGATAGCTGGGATCTGTCAAAAGGTTTGGAAATACATCCTGTAACCATCTTTTTGGGGTGTTTTAGATGTTTCGTGATGGTTTTATGAAGTTGTGACAAAGATCTCTGTAGACTTTGGTGGATGTGTCTCTTGGAAATGTCATGTTTCTTTGTGCTCTTCTTATCTCGTCAAGGGTATTTCTGAGGAGCTCAGCTGGTTTCCATTGGTAAGTTATACGAAGACTGCTGCTTTAATTGTCCCAAATTGTTTTTCTCGAGTGCAACAGCAGCAATTGAACATGCTTCATTTGTGTATAGGACGTTCACGTCAGACTTTTATTCTGATTTGTTTTTTTTTCTCATTGCTTCTGTAGGCACAAAGATCTGATCTTCGCCATCATTATTTCGAGTTACTTCAAGATCTTTCTTGTTAGCATGACGGTATATTTACAAGAATCCTAGTTATCTTCCTTTTAATCGTAGAGACATTCAGTGCAGGCTTTCTCGTAAAAATGTGTATCCTTGTAATATTCGGCGTGTTTTACTTTTAGTGCAGGTCTGGGAATTTCCATCCACAGTGATCTTCATCGTTGATTTTTTTGTTTTGTCGTCCAATGCAGTAGCAATTAAAGGTGAGGAGAGCTTCAGCTTGTCAGCAGATAACTCTGGCTCCTTAACCAATCCTAGTATTGCATAGATTAGGGATTTTCATTTCACCATAGCAGGGAAAATTCATGATTATGGCGTTAAAAAGCTCTTTTGTGAAGCAGTGATAACGGAATCAGCTGTGAGTAGATGCATTGGAACTTGCTTGTGTGCTCATGCAGCTAAGTTTTTGGCCACAAAGCTGTTT

mRNA sequence

TTCGATTGTGTCCAGAATTCGCCGATGGGAAGGGAAACAAAGGTGAATCGTTGTGTTCAGTGTGGATTTGGAACGAATCAACTGTTTGTTCAGTACTCACCCGGCAATATACGTCTTATGAAATGCGGCAATTGCGAATCCATTGCAGACGAATACATCGAGTGCGAAGCGATGATTGTACTAATCGATTTGATACTGCACAAGCCCCAGGCCTACAGACATTTGCTCTACAACGTACTTAATAGAGATCGTCTGTCTTGTCAGGATTTAATGTGGAAGTTCGCTCTGAGTTTTCTTCTTTTGGATGCTTACAGGTGTATGCTTCTGAGACTAAGTGACATACAAGGAAATTCATCTTTGAGCTTTTCATCGATAGCTGGGATCTGTCAAAAGACTTTGGTGGATGTGTCTCTTGGAAATGTCATGTTTCTTTGTGCTCTTCTTATCTCGTCAAGGGTATTTCTGAGGAGCTCAGCTGGTTTCCATTGGCACAAAGATCTGATCTTCGCCATCATTATTTCGAGTTACTTCAAGATCTTTCTTGTTAGCATGACGGTCTGGGAATTTCCATCCACAGTGATCTTCATCGTTGATTTTTTTGTTTTGTCGTCCAATGCAGTAGCAATTAAAGCAGTGATAACGGAATCAGCTGTGAGTAGATGCATTGGAACTTGCTTGTGTGCTCATGCAGCTAAGTTTTTGGCCACAAAGCTGTTT

Coding sequence (CDS)

TTCGATTGTGTCCAGAATTCGCCGATGGGAAGGGAAACAAAGGTGAATCGTTGTGTTCAGTGTGGATTTGGAACGAATCAACTGTTTGTTCAGTACTCACCCGGCAATATACGTCTTATGAAATGCGGCAATTGCGAATCCATTGCAGACGAATACATCGAGTGCGAAGCGATGATTGTACTAATCGATTTGATACTGCACAAGCCCCAGGCCTACAGACATTTGCTCTACAACGTACTTAATAGAGATCGTCTGTCTTGTCAGGATTTAATGTGGAAGTTCGCTCTGAGTTTTCTTCTTTTGGATGCTTACAGGTGTATGCTTCTGAGACTAAGTGACATACAAGGAAATTCATCTTTGAGCTTTTCATCGATAGCTGGGATCTGTCAAAAGACTTTGGTGGATGTGTCTCTTGGAAATGTCATGTTTCTTTGTGCTCTTCTTATCTCGTCAAGGGTATTTCTGAGGAGCTCAGCTGGTTTCCATTGGCACAAAGATCTGATCTTCGCCATCATTATTTCGAGTTACTTCAAGATCTTTCTTGTTAGCATGACGGTCTGGGAATTTCCATCCACAGTGATCTTCATCGTTGATTTTTTTGTTTTGTCGTCCAATGCAGTAGCAATTAAAGCAGTGATAACGGAATCAGCTGTGAGTAGATGCATTGGAACTTGCTTGTGTGCTCATGCAGCTAAGTTTTTGGCCACAAAGCTGTTT

Protein sequence

FDCVQNSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGICQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSMTVWEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF
Homology
BLAST of MS010306 vs. NCBI nr
Match: XP_022144295.1 (protein arv1 homolog [Momordica charantia])

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 232/235 (98.72%), Postives = 234/235 (99.57%), Query Frame = 0

Query: 5   QNSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDL 64
           +NSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDL
Sbjct: 68  ENSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDL 127

Query: 65  ILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSS 124
           ILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSS
Sbjct: 128 ILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSS 187

Query: 125 IAGICQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSM 184
           IAGIC+KTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSM
Sbjct: 188 IAGICRKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSM 247

Query: 185 TVWEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
           TVWEFPSTVIFIVDFFVLSSNAVAIK VITESAVSRCIGTCLCAHAAKFLATKLF
Sbjct: 248 TVWEFPSTVIFIVDFFVLSSNAVAIK-VITESAVSRCIGTCLCAHAAKFLATKLF 301

BLAST of MS010306 vs. NCBI nr
Match: XP_022924656.1 (protein arv1 homolog [Cucurbita moschata] >XP_022924657.1 protein arv1 homolog [Cucurbita moschata])

HSP 1 Score: 328.9 bits (842), Expect = 3.5e-86
Identity = 174/233 (74.68%), Postives = 196/233 (84.12%), Query Frame = 0

Query: 9   MGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHK 68
           MGR+T  NRCVQCGFGTNQLF+ YSPGN+ L+KC NC+S+ADEYIECE MIVLIDLIL K
Sbjct: 1   MGRDTNRNRCVQCGFGTNQLFLLYSPGNMHLVKCDNCKSVADEYIECEIMIVLIDLILLK 60

Query: 69  PQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGI 128
            QAY HLLYN+++ D LS QDL WKF LSFLLLDAYR MLLRLS+ Q  SS++FSS  GI
Sbjct: 61  RQAYTHLLYNLIDTDCLSRQDLAWKFGLSFLLLDAYRYMLLRLSEKQ--SSMTFSSTIGI 120

Query: 129 CQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFH--WHKDLIFAIIISSYFKIFLVSMTV 188
           CQK L+D+ +GN+MF+CAL I SRVFLRSSAG H   +KD  FAIIISSYFKIFLV M +
Sbjct: 121 CQKILMDICVGNIMFICALHILSRVFLRSSAGVHKYRYKDFFFAIIISSYFKIFLVCMMI 180

Query: 189 WEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
           WEFPS VIFI+D FVLSSN +AIK VITESAVSRC+GTCLCAH AKFLATKLF
Sbjct: 181 WEFPSPVIFIIDLFVLSSNVIAIK-VITESAVSRCVGTCLCAHGAKFLATKLF 230

BLAST of MS010306 vs. NCBI nr
Match: XP_004133756.1 (protein ARV 1 isoform X1 [Cucumis sativus] >KGN56329.1 hypothetical protein Csa_011421 [Cucumis sativus])

HSP 1 Score: 326.6 bits (836), Expect = 1.8e-85
Identity = 179/246 (72.76%), Postives = 196/246 (79.67%), Query Frame = 0

Query: 1   FDCV-----QNSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIEC 60
           FDCV     +NS MGRET  NRCVQCGF T+QLFV YSPGN+ LMKC NC+S+ADEYIEC
Sbjct: 35  FDCVAGLLPRNSSMGRETNGNRCVQCGFRTSQLFVLYSPGNMHLMKCDNCKSVADEYIEC 94

Query: 61  EAMIVLIDLILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQ 120
           EAMIVL+DLILHK QAYRHLLYN  +R+RLS +DLMWK  LSFLLLDAYR MLL LS  +
Sbjct: 95  EAMIVLVDLILHKRQAYRHLLYNQFDRNRLSRKDLMWKLGLSFLLLDAYRYMLLILS--E 154

Query: 121 GNSSLSFSSIAGICQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWH--KDLIFAIII 180
              S+S SS  GICQK L+   LGN MF+C L I SRVFL SS+G H H  ++  FAIII
Sbjct: 155 KPLSMSLSSTIGICQKALMYALLGNAMFICVLHILSRVFLTSSSGDHRHRYREFFFAIII 214

Query: 181 SSYFKIFLVSMTVWEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKF 240
           SSYFKIFLVSM +WEFPSTVIFIVD FVLSSN VAIK VITES VSRCIGTCLCAH AKF
Sbjct: 215 SSYFKIFLVSMMIWEFPSTVIFIVDLFVLSSNVVAIK-VITESTVSRCIGTCLCAHGAKF 274

BLAST of MS010306 vs. NCBI nr
Match: XP_023527859.1 (protein arv1 homolog isoform X5 [Cucurbita pepo subsp. pepo] >XP_023527860.1 protein arv1 homolog isoform X5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.6 bits (836), Expect = 1.8e-85
Identity = 172/233 (73.82%), Postives = 195/233 (83.69%), Query Frame = 0

Query: 9   MGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHK 68
           MGR+T  NRCVQCGFGTNQLF+ YSPGN+ L+KC NC+S+ADEYIECE MIVLIDLIL K
Sbjct: 1   MGRDTNRNRCVQCGFGTNQLFLLYSPGNMHLVKCDNCKSVADEYIECEIMIVLIDLILLK 60

Query: 69  PQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGI 128
            QAY HLLYN+++ D LS QDL WKF LSFLLLDAYR M+LRLS+ Q  SS++FSS  GI
Sbjct: 61  RQAYTHLLYNLIDTDCLSRQDLAWKFGLSFLLLDAYRYMILRLSEKQ--SSMTFSSTIGI 120

Query: 129 CQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFH--WHKDLIFAIIISSYFKIFLVSMTV 188
           CQK L+D+ +GN+MF+CAL I SRVFLRSSAG H   +KD  FAIIISSYFKIFLV M +
Sbjct: 121 CQKILMDICVGNIMFICALHILSRVFLRSSAGVHKYRYKDFFFAIIISSYFKIFLVCMMI 180

Query: 189 WEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
           WEFPS VIFI+D FVLSSN +AIK VITES VSRC+GTCLCAH AKFLATKLF
Sbjct: 181 WEFPSPVIFIIDLFVLSSNVIAIK-VITESGVSRCVGTCLCAHGAKFLATKLF 230

BLAST of MS010306 vs. NCBI nr
Match: XP_022979274.1 (protein arv1 homolog isoform X1 [Cucurbita maxima] >XP_022979275.1 protein arv1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 322.4 bits (825), Expect = 3.3e-84
Identity = 171/233 (73.39%), Postives = 193/233 (82.83%), Query Frame = 0

Query: 9   MGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHK 68
           MGR+   NRCVQCGFGTNQLF+ YSPGN+ L+KC NC+S+ADEYIECE MIVLIDLIL K
Sbjct: 1   MGRDINRNRCVQCGFGTNQLFLLYSPGNMHLVKCDNCKSVADEYIECEIMIVLIDLILFK 60

Query: 69  PQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGI 128
            QAY HLLYN+++ D LS QDL WKF LSFLLLDAYR MLLRLS+ Q  S ++FSS  GI
Sbjct: 61  RQAYTHLLYNLIDTDCLSRQDLAWKFGLSFLLLDAYRYMLLRLSEKQ--SYMTFSSTIGI 120

Query: 129 CQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFH--WHKDLIFAIIISSYFKIFLVSMTV 188
           CQK L+D+ +GN+MF+CAL I SRVFLRSSAG H   +K   FAIIISSYFKIFLV M +
Sbjct: 121 CQKILMDICVGNIMFICALHILSRVFLRSSAGVHKYRYKHFFFAIIISSYFKIFLVCMMI 180

Query: 189 WEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
           WEFPS VIFI+D FVLSSN +AIK VITESAVSRC+GTCLCAH AKFLATKLF
Sbjct: 181 WEFPSPVIFIIDLFVLSSNVIAIK-VITESAVSRCVGTCLCAHGAKFLATKLF 230

BLAST of MS010306 vs. ExPASy Swiss-Prot
Match: Q5MK23 (Protein ARV 2 OS=Arabidopsis thaliana OX=3702 GN=ARV2 PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-55
Identity = 117/230 (50.87%), Postives = 158/230 (68.70%), Query Frame = 0

Query: 9   MGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHK 68
           M RE K   CV+CG     LF+QYSPGN RLMKC NCE +ADEY+ECE +I+ IDLILHK
Sbjct: 1   MAREKKT--CVECGHKVKSLFIQYSPGNFRLMKCENCEEVADEYVECELLIIFIDLILHK 60

Query: 69  PQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGI 128
            +AYRHLLYNV+N++  + Q L+WK  L++LLLD YR +LLR ++   N S+SF   +  
Sbjct: 61  TKAYRHLLYNVVNQESANVQHLLWKLVLAYLLLDTYRSLLLRRTNDGSNVSMSFLFES-- 120

Query: 129 CQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSMTVWE 188
             + LV+V   N  F+ +   ++++ L    G    K+++  I+ISSY KIFL +M VWE
Sbjct: 121 -LEVLVNVLSANFAFVFSFAFAAKLMLVMPRG----KEILLTILISSYVKIFLFAMPVWE 180

Query: 189 FPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKL 239
           FP +VIFIVD  VL+SNAVA+K V+TESA SRC+  C  AH+ +FL  ++
Sbjct: 181 FPVSVIFIVDMLVLTSNAVALK-VMTESATSRCLAVCFIAHSIRFLVDQI 220

BLAST of MS010306 vs. ExPASy Swiss-Prot
Match: Q5MK24 (Protein ARV 1 OS=Arabidopsis thaliana OX=3702 GN=ARV1 PE=2 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-55
Identity = 113/224 (50.45%), Postives = 156/224 (69.64%), Query Frame = 0

Query: 16  NRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHKPQAYRHL 75
           +RCV CGF    LF+QYSPGNIRLMKCGNC+ +ADEYIECE MI+ IDLILH+P+ YRH+
Sbjct: 6   HRCVGCGFRVKSLFIQYSPGNIRLMKCGNCKEVADEYIECERMIIFIDLILHRPKVYRHV 65

Query: 76  LYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGICQKTLVD 135
           LYN +N   ++ Q L+WK   ++LLLD YR +LLR SD +  SS S S +  +  K L+ 
Sbjct: 66  LYNAINPATVNIQHLLWKLVFAYLLLDCYRSLLLRKSDEE--SSFSDSPVL-LSIKVLIG 125

Query: 136 VSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSMTVWEFPSTVIF 195
           V   N  F+ +  I+++  L   +     ++++  I ISSYFKIFL++M VWEFP +VIF
Sbjct: 126 VLSANAAFIISFAIATKGLLNEVSR---RREIMLGIFISSYFKIFLLAMLVWEFPMSVIF 185

Query: 196 IVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
            VD  +L+SN++A+K V+TES ++RCI  CL AH  +FL  ++F
Sbjct: 186 FVDILLLTSNSMALK-VMTESTMTRCIAVCLIAHLIRFLVGQIF 222

BLAST of MS010306 vs. ExPASy Swiss-Prot
Match: Q54GD9 (Protein arv1 homolog OS=Dictyostelium discoideum OX=44689 GN=arv1 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-17
Identity = 64/207 (30.92%), Postives = 108/207 (52.17%), Query Frame = 0

Query: 18  CVQCGFGTNQLFVQY---SPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHKPQAYRH 77
           C++CG   N ++ ++     GNIRL +C +C   AD+Y+E + +IV +DL LHK QAYRH
Sbjct: 3   CIECGRPVNDVYKEFGKAGSGNIRLTRCASCNQTADKYVEYDFIIVFLDLFLHKAQAYRH 62

Query: 78  LLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSS------LSFSSIAGI 137
           LL+N              K  + ++  ++Y    LR  + + + S      + +      
Sbjct: 63  LLFNRQPYRDFGIPIQYIKVLVVYIFFESY-IKWLRFKEYEQHPSGPAFYYIDWQDDVPY 122

Query: 138 CQKTLVDVS--LGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSMTV 197
            +   + V+      +++ ++++S R    S      +  LI AII+SS+ K FLV M +
Sbjct: 123 DRYWFIFVTAIAEFAVYILSIILSVRFIYESRYPIIKYNYLIMAIILSSFGKGFLVLMMI 182

Query: 198 WEFPSTVIFIVDFFVLSSNAVAIKAVI 214
           W++P +   I++ FVLSSN VAIK  +
Sbjct: 183 WDYPFSFGSILNIFVLSSNVVAIKVFL 208

BLAST of MS010306 vs. ExPASy Swiss-Prot
Match: Q9HDX5 (Protein arv1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=arv1 PE=3 SV=3)

HSP 1 Score: 72.4 bits (176), Expect = 7.8e-12
Identity = 58/203 (28.57%), Postives = 106/203 (52.22%), Query Frame = 0

Query: 17  RCVQCGFGTNQLFVQYSPG--NIRLMKCGNCESIADEYIECEAMIVLIDLILHKPQAYRH 76
           +CV+CG   + L+  Y  G  NIRL +C NC+  AD+YIE + +++ +D+IL KPQ YRH
Sbjct: 2   KCVECGAEVDSLYTYYGRGTSNIRLAQCKNCKQFADKYIELDVVLISMDVILMKPQVYRH 61

Query: 77  LLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSL--SFSSIAGICQKT 136
           LL+N L+          ++  ++F +L +   + L  S ++  ++L   F+       + 
Sbjct: 62  LLFNSLSA-------RTFRNVVNFCILISLFNVFLVWSRLEKRAALFPYFTPAQAFLSQP 121

Query: 137 LVDVSLGNVMFLCAL-----LISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSMTVW 196
           ++   L  ++ +C +      IS  + L  + G+        A+I+SS  ++  V M +W
Sbjct: 122 IIRQYL-TLLLICLVETTVYQISVVLLLCLTMGWKSWTSASGAVILSSSTRMLPVFMVIW 181

Query: 197 EFP-STVIFIVDFFVLSSNAVAI 210
           ++  S    +V++ VL SN  A+
Sbjct: 182 DYDLSIAATVVEWVVLFSNVDAL 196

BLAST of MS010306 vs. ExPASy Swiss-Prot
Match: Q9D0U9 (Protein ARV1 OS=Mus musculus OX=10090 GN=Arv1 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.3e-10
Identity = 62/211 (29.38%), Postives = 102/211 (48.34%), Query Frame = 0

Query: 17  RCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHKPQAYRHLL 76
           RC++C     +L+  YS G +++  C +C+   D+YIE + +I+LI+ IL K QAYRH+L
Sbjct: 28  RCIECNREAQELYRDYSHGVLKITICKSCQKPVDKYIEYDPVIILINAILCKTQAYRHIL 87

Query: 77  YNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGICQKTLVDV 136
           +N       +  ++  K  +  LL +AY    LR   +Q +SS S +    I      D 
Sbjct: 88  FN-------TKINIHGKLCMFCLLCEAY----LRWWQLQ-DSSQSPAPDDVIRYAKEWDF 147

Query: 137 SLGNVMFLCALLISSRVFLRSSAGFHWHKD------------LIFAIIISSYFKIFLVSM 196
                MF+ A       FL     F W +             L+ A+++SSY K+ L+  
Sbjct: 148 YR---MFVIA-SFEQAAFLTGIFAFLWVQQPMTAKRAPDFVLLLKALLLSSYGKLLLIPA 207

Query: 197 TVWEFPST--VIFIVDFFVLSSNAVAIKAVI 214
            +WE   T   + ++  FVL+SN  A++  +
Sbjct: 208 VIWEHDYTPLCLRLIKVFVLTSNFQAVRVTL 222

BLAST of MS010306 vs. ExPASy TrEMBL
Match: A0A6J1CR90 (protein arv1 homolog OS=Momordica charantia OX=3673 GN=LOC111014008 PE=3 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.8e-124
Identity = 232/235 (98.72%), Postives = 234/235 (99.57%), Query Frame = 0

Query: 5   QNSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDL 64
           +NSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDL
Sbjct: 68  ENSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDL 127

Query: 65  ILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSS 124
           ILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSS
Sbjct: 128 ILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSS 187

Query: 125 IAGICQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSM 184
           IAGIC+KTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSM
Sbjct: 188 IAGICRKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSM 247

Query: 185 TVWEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
           TVWEFPSTVIFIVDFFVLSSNAVAIK VITESAVSRCIGTCLCAHAAKFLATKLF
Sbjct: 248 TVWEFPSTVIFIVDFFVLSSNAVAIK-VITESAVSRCIGTCLCAHAAKFLATKLF 301

BLAST of MS010306 vs. ExPASy TrEMBL
Match: A0A6J1E9K8 (protein arv1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111432090 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 174/233 (74.68%), Postives = 196/233 (84.12%), Query Frame = 0

Query: 9   MGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHK 68
           MGR+T  NRCVQCGFGTNQLF+ YSPGN+ L+KC NC+S+ADEYIECE MIVLIDLIL K
Sbjct: 1   MGRDTNRNRCVQCGFGTNQLFLLYSPGNMHLVKCDNCKSVADEYIECEIMIVLIDLILLK 60

Query: 69  PQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGI 128
            QAY HLLYN+++ D LS QDL WKF LSFLLLDAYR MLLRLS+ Q  SS++FSS  GI
Sbjct: 61  RQAYTHLLYNLIDTDCLSRQDLAWKFGLSFLLLDAYRYMLLRLSEKQ--SSMTFSSTIGI 120

Query: 129 CQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFH--WHKDLIFAIIISSYFKIFLVSMTV 188
           CQK L+D+ +GN+MF+CAL I SRVFLRSSAG H   +KD  FAIIISSYFKIFLV M +
Sbjct: 121 CQKILMDICVGNIMFICALHILSRVFLRSSAGVHKYRYKDFFFAIIISSYFKIFLVCMMI 180

Query: 189 WEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
           WEFPS VIFI+D FVLSSN +AIK VITESAVSRC+GTCLCAH AKFLATKLF
Sbjct: 181 WEFPSPVIFIIDLFVLSSNVIAIK-VITESAVSRCVGTCLCAHGAKFLATKLF 230

BLAST of MS010306 vs. ExPASy TrEMBL
Match: A0A0A0L5K8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116660 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 8.5e-86
Identity = 179/246 (72.76%), Postives = 196/246 (79.67%), Query Frame = 0

Query: 1   FDCV-----QNSPMGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIEC 60
           FDCV     +NS MGRET  NRCVQCGF T+QLFV YSPGN+ LMKC NC+S+ADEYIEC
Sbjct: 35  FDCVAGLLPRNSSMGRETNGNRCVQCGFRTSQLFVLYSPGNMHLMKCDNCKSVADEYIEC 94

Query: 61  EAMIVLIDLILHKPQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQ 120
           EAMIVL+DLILHK QAYRHLLYN  +R+RLS +DLMWK  LSFLLLDAYR MLL LS  +
Sbjct: 95  EAMIVLVDLILHKRQAYRHLLYNQFDRNRLSRKDLMWKLGLSFLLLDAYRYMLLILS--E 154

Query: 121 GNSSLSFSSIAGICQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWH--KDLIFAIII 180
              S+S SS  GICQK L+   LGN MF+C L I SRVFL SS+G H H  ++  FAIII
Sbjct: 155 KPLSMSLSSTIGICQKALMYALLGNAMFICVLHILSRVFLTSSSGDHRHRYREFFFAIII 214

Query: 181 SSYFKIFLVSMTVWEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKF 240
           SSYFKIFLVSM +WEFPSTVIFIVD FVLSSN VAIK VITES VSRCIGTCLCAH AKF
Sbjct: 215 SSYFKIFLVSMMIWEFPSTVIFIVDLFVLSSNVVAIK-VITESTVSRCIGTCLCAHGAKF 274

BLAST of MS010306 vs. ExPASy TrEMBL
Match: A0A6J1ISS9 (protein arv1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479047 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.6e-84
Identity = 171/233 (73.39%), Postives = 193/233 (82.83%), Query Frame = 0

Query: 9   MGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHK 68
           MGR+   NRCVQCGFGTNQLF+ YSPGN+ L+KC NC+S+ADEYIECE MIVLIDLIL K
Sbjct: 1   MGRDINRNRCVQCGFGTNQLFLLYSPGNMHLVKCDNCKSVADEYIECEIMIVLIDLILFK 60

Query: 69  PQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGI 128
            QAY HLLYN+++ D LS QDL WKF LSFLLLDAYR MLLRLS+ Q  S ++FSS  GI
Sbjct: 61  RQAYTHLLYNLIDTDCLSRQDLAWKFGLSFLLLDAYRYMLLRLSEKQ--SYMTFSSTIGI 120

Query: 129 CQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFH--WHKDLIFAIIISSYFKIFLVSMTV 188
           CQK L+D+ +GN+MF+CAL I SRVFLRSSAG H   +K   FAIIISSYFKIFLV M +
Sbjct: 121 CQKILMDICVGNIMFICALHILSRVFLRSSAGVHKYRYKHFFFAIIISSYFKIFLVCMMI 180

Query: 189 WEFPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
           WEFPS VIFI+D FVLSSN +AIK VITESAVSRC+GTCLCAH AKFLATKLF
Sbjct: 181 WEFPSPVIFIIDLFVLSSNVIAIK-VITESAVSRCVGTCLCAHGAKFLATKLF 230

BLAST of MS010306 vs. ExPASy TrEMBL
Match: A0A1S4DSU3 (protein arv1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483093 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.3e-83
Identity = 175/238 (73.53%), Postives = 189/238 (79.41%), Query Frame = 0

Query: 9   MGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHK 68
           MG ET  NRCVQCGF T+QLFV YSPGN+ LMKC NC+S+ADEYIECE MIVL+DLILHK
Sbjct: 1   MGTETNGNRCVQCGFRTSQLFVLYSPGNMHLMKCDNCKSVADEYIECEVMIVLVDLILHK 60

Query: 69  PQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGI 128
            QAYRHLLYN  +R+RLS QDLMWK  LSFLLLDAYR MLL LS+ Q   S+SFSS  GI
Sbjct: 61  RQAYRHLLYNQFDRNRLSRQDLMWKLGLSFLLLDAYRYMLLILSEKQ--LSMSFSSTIGI 120

Query: 129 CQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHK--DLIFAIIISSYFKIFLVSMTV 188
           CQK L+ V LGN MFLC L I SRVFL SS G H H+  +  FAIIISSYFKIFLVSM +
Sbjct: 121 CQKALMYVLLGNAMFLCTLHILSRVFLTSSTGDHRHRGTEFFFAIIISSYFKIFLVSMMI 180

Query: 189 WEFPSTVIFIVDFFVLSSNAVAIK-----AVITESAVSRCIGTCLCAHAAKFLATKLF 240
           WEFPSTVIFIVD FVLSSN VAIK     AVIT S VSRCIGTCLCAH AK+LATK F
Sbjct: 181 WEFPSTVIFIVDLFVLSSNVVAIKGLFCEAVITGSTVSRCIGTCLCAHGAKYLATKAF 236

BLAST of MS010306 vs. TAIR 10
Match: AT4G01510.1 (Arv1-like protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.1e-56
Identity = 117/230 (50.87%), Postives = 158/230 (68.70%), Query Frame = 0

Query: 9   MGRETKVNRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHK 68
           M RE K   CV+CG     LF+QYSPGN RLMKC NCE +ADEY+ECE +I+ IDLILHK
Sbjct: 1   MAREKKT--CVECGHKVKSLFIQYSPGNFRLMKCENCEEVADEYVECELLIIFIDLILHK 60

Query: 69  PQAYRHLLYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGI 128
            +AYRHLLYNV+N++  + Q L+WK  L++LLLD YR +LLR ++   N S+SF   +  
Sbjct: 61  TKAYRHLLYNVVNQESANVQHLLWKLVLAYLLLDTYRSLLLRRTNDGSNVSMSFLFES-- 120

Query: 129 CQKTLVDVSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSMTVWE 188
             + LV+V   N  F+ +   ++++ L    G    K+++  I+ISSY KIFL +M VWE
Sbjct: 121 -LEVLVNVLSANFAFVFSFAFAAKLMLVMPRG----KEILLTILISSYVKIFLFAMPVWE 180

Query: 189 FPSTVIFIVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKL 239
           FP +VIFIVD  VL+SNAVA+K V+TESA SRC+  C  AH+ +FL  ++
Sbjct: 181 FPVSVIFIVDMLVLTSNAVALK-VMTESATSRCLAVCFIAHSIRFLVDQI 220

BLAST of MS010306 vs. TAIR 10
Match: AT1G01020.1 (Arv1-like protein )

HSP 1 Score: 215.7 bits (548), Expect = 4.1e-56
Identity = 113/224 (50.45%), Postives = 156/224 (69.64%), Query Frame = 0

Query: 16  NRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHKPQAYRHL 75
           +RCV CGF    LF+QYSPGNIRLMKCGNC+ +ADEYIECE MI+ IDLILH+P+ YRH+
Sbjct: 6   HRCVGCGFRVKSLFIQYSPGNIRLMKCGNCKEVADEYIECERMIIFIDLILHRPKVYRHV 65

Query: 76  LYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGICQKTLVD 135
           LYN +N   ++ Q L+WK   ++LLLD YR +LLR SD +  SS S S +  +  K L+ 
Sbjct: 66  LYNAINPATVNIQHLLWKLVFAYLLLDCYRSLLLRKSDEE--SSFSDSPVL-LSIKVLIG 125

Query: 136 VSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSMTVWEFPSTVIF 195
           V   N  F+ +  I+++  L   +     ++++  I ISSYFKIFL++M VWEFP +VIF
Sbjct: 126 VLSANAAFIISFAIATKGLLNEVSR---RREIMLGIFISSYFKIFLLAMLVWEFPMSVIF 185

Query: 196 IVDFFVLSSNAVAIKAVITESAVSRCIGTCLCAHAAKFLATKLF 240
            VD  +L+SN++A+K V+TES ++RCI  CL AH  +FL  ++F
Sbjct: 186 FVDILLLTSNSMALK-VMTESTMTRCIAVCLIAHLIRFLVGQIF 222

BLAST of MS010306 vs. TAIR 10
Match: AT1G01020.2 (Arv1-like protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.8e-40
Identity = 85/171 (49.71%), Postives = 116/171 (67.84%), Query Frame = 0

Query: 16  NRCVQCGFGTNQLFVQYSPGNIRLMKCGNCESIADEYIECEAMIVLIDLILHKPQAYRHL 75
           +RCV CGF    LF+QYSPGNIRLMKCGNC+ +ADEYIECE MI+ IDLILH+P+ YRH+
Sbjct: 6   HRCVGCGFRVKSLFIQYSPGNIRLMKCGNCKEVADEYIECERMIIFIDLILHRPKVYRHV 65

Query: 76  LYNVLNRDRLSCQDLMWKFALSFLLLDAYRCMLLRLSDIQGNSSLSFSSIAGICQKTLVD 135
           LYN +N   ++ Q L+WK   ++LLLD YR +LLR SD +  SS S S +  +  K L+ 
Sbjct: 66  LYNAINPATVNIQHLLWKLVFAYLLLDCYRSLLLRKSDEE--SSFSDSPVL-LSIKVLIG 125

Query: 136 VSLGNVMFLCALLISSRVFLRSSAGFHWHKDLIFAIIISSYFKIFLVSMTV 187
           V   N  F+ +  I+++  L   +     ++++  I ISSYFKIFL++M V
Sbjct: 126 VLSANAAFIISFAIATKGLLNEVSR---RREIMLGIFISSYFKIFLLAMLV 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022144295.11.6e-12398.72protein arv1 homolog [Momordica charantia][more]
XP_022924656.13.5e-8674.68protein arv1 homolog [Cucurbita moschata] >XP_022924657.1 protein arv1 homolog [... [more]
XP_004133756.11.8e-8572.76protein ARV 1 isoform X1 [Cucumis sativus] >KGN56329.1 hypothetical protein Csa_... [more]
XP_023527859.11.8e-8573.82protein arv1 homolog isoform X5 [Cucurbita pepo subsp. pepo] >XP_023527860.1 pro... [more]
XP_022979274.13.3e-8473.39protein arv1 homolog isoform X1 [Cucurbita maxima] >XP_022979275.1 protein arv1 ... [more]
Match NameE-valueIdentityDescription
Q5MK231.5e-5550.87Protein ARV 2 OS=Arabidopsis thaliana OX=3702 GN=ARV2 PE=1 SV=1[more]
Q5MK245.7e-5550.45Protein ARV 1 OS=Arabidopsis thaliana OX=3702 GN=ARV1 PE=2 SV=1[more]
Q54GD91.6e-1730.92Protein arv1 homolog OS=Dictyostelium discoideum OX=44689 GN=arv1 PE=3 SV=1[more]
Q9HDX57.8e-1228.57Protein arv1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN... [more]
Q9D0U97.3e-1029.38Protein ARV1 OS=Mus musculus OX=10090 GN=Arv1 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1CR907.8e-12498.72protein arv1 homolog OS=Momordica charantia OX=3673 GN=LOC111014008 PE=3 SV=1[more]
A0A6J1E9K81.7e-8674.68protein arv1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111432090 PE=3 SV=1[more]
A0A0A0L5K88.5e-8672.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116660 PE=3 SV=1[more]
A0A6J1ISS91.6e-8473.39protein arv1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479047 PE=3... [more]
A0A1S4DSU32.3e-8373.53protein arv1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483093 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
AT4G01510.11.1e-5650.87Arv1-like protein [more]
AT1G01020.14.1e-5650.45Arv1-like protein [more]
AT1G01020.21.8e-4049.71Arv1-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007290Arv1 proteinPFAMPF04161Arv1coord: 17..209
e-value: 3.4E-44
score: 151.5
IPR007290Arv1 proteinPANTHERPTHR14467ARV1coord: 14..237
NoneNo IPR availablePANTHERPTHR14467:SF1PROTEIN ARV 2coord: 14..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS010306.1MS010306.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032366 intracellular sterol transport