MS010297 (gene) Bitter gourd (TR) v1

Overview


Name	MS010297
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	AP2/ERF domain-containing transcription factor, putative
Location	scaffold391: 1477432 .. 1477740 (+)
RNA-Seq Expression	MS010297
Synteny	MS010297

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTTGAAGCAGTTTCATCCAGAAAACTTGGCAAGTTCAAGGATAGAACTTGTAAAAGCAAGTTTGTTGGTGTCAGACAAAGGCCCTCTGGGAAATGGGTGGCAGAGATCAAAGACACAACACATGATATCAGAATGTGGTTGGGAACCTTCAAGACAGCGGAAGAGGCTGCCAGAGCCTACGATGAAGCTGCATGCCTCCTCCGCGGTGCCAACACTCGAACCAACTTTACATCCCATCTCAATTCTAAATCCATCCTCTCTTTGAAAATCAGAAACCTCCTGAACCAGAAGATCAGTTTGAAAAGA

mRNA sequence

CAGCTTGAAGCAGTTTCATCCAGAAAACTTGGCAAGTTCAAGGATAGAACTTGTAAAAGCAAGTTTGTTGGTGTCAGACAAAGGCCCTCTGGGAAATGGGTGGCAGAGATCAAAGACACAACACATGATATCAGAATGTGGTTGGGAACCTTCAAGACAGCGGAAGAGGCTGCCAGAGCCTACGATGAAGCTGCATGCCTCCTCCGCGGTGCCAACACTCGAACCAACTTTACATCCCATCTCAATTCTAAATCCATCCTCTCTTTGAAAATCAGAAACCTCCTGAACCAGAAGATCAGTTTGAAAAGA

Coding sequence (CDS)

CAGCTTGAAGCAGTTTCATCCAGAAAACTTGGCAAGTTCAAGGATAGAACTTGTAAAAGCAAGTTTGTTGGTGTCAGACAAAGGCCCTCTGGGAAATGGGTGGCAGAGATCAAAGACACAACACATGATATCAGAATGTGGTTGGGAACCTTCAAGACAGCGGAAGAGGCTGCCAGAGCCTACGATGAAGCTGCATGCCTCCTCCGCGGTGCCAACACTCGAACCAACTTTACATCCCATCTCAATTCTAAATCCATCCTCTCTTTGAAAATCAGAAACCTCCTGAACCAGAAGATCAGTTTGAAAAGA

Protein sequence

QLEAVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR

Homology

[Close]

BLAST of MS010297 vs. NCBI nr
Match: XP_022153759.1 (ethylene-responsive transcription factor RAP2-11 [Momordica charantia])

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   QLEAVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARA 60
           QLEAVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARA
Sbjct: 8   QLEAVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARA 67

Query: 61  YDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           YDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR
Sbjct: 68  YDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 110

[Close]

BLAST of MS010297 vs. NCBI nr
Match: XP_022985763.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima] >XP_022985764.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima] >XP_022985765.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima] >XP_022985767.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima])

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-35
Identity = 82/100 (82.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 4   AVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDE 63
           +VS  K+GK KDR+ +  FVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAA AYDE
Sbjct: 41  SVSGSKIGKCKDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAATAYDE 100

Query: 64  AACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           AA LLRGANTRTNF +HL S S LS KIRNLLNQKISLKR
Sbjct: 101 AARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKISLKR 140

[Close]

BLAST of MS010297 vs. NCBI nr
Match: XP_023512705.1 (ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo] >XP_023512706.1 ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.7 bits (400), Expect = 2.7e-35
Identity = 82/100 (82.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 4   AVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDE 63
           +VS  K+GK KDR+ +  FVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAA AYDE
Sbjct: 14  SVSGSKVGKCKDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAATAYDE 73

Query: 64  AACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           AA LLRGANTRTNF +HL S S LS KIRNLLNQKISLKR
Sbjct: 74  AARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKISLKR 113

[Close]

BLAST of MS010297 vs. NCBI nr
Match: KAG6570315.1 (Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 158.3 bits (399), Expect = 3.6e-35
Identity = 81/100 (81.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 4   AVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDE 63
           +VS  K+GK KDR+ +  FVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAA AYDE
Sbjct: 84  SVSGSKVGKCKDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAATAYDE 143

Query: 64  AACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           AA LLRGANTRTNF +HL S S LS KIRNLLNQK+SLKR
Sbjct: 144 AARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKVSLKR 183

[Close]

BLAST of MS010297 vs. NCBI nr
Match: KAG7010209.1 (Ethylene-responsive transcription factor RAP2-11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 158.3 bits (399), Expect = 3.6e-35
Identity = 81/100 (81.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 4   AVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDE 63
           +VS  K+GK KDR+ +  FVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAA AYDE
Sbjct: 45  SVSGSKVGKCKDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAATAYDE 104

Query: 64  AACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           AA LLRGANTRTNF +HL S S LS KIRNLLNQK+SLKR
Sbjct: 105 AARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKVSLKR 144

[Close]

BLAST of MS010297 vs. ExPASy Swiss-Prot
Match: Q6J9S1 (Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702 GN=RAP2-11 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-32
Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 12  KFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDEAACLLRGA 71
           K K +  K+KFVGVRQRPSGKWVAEIKDTT  IRMWLGTF+TAEEAARAYDEAACLLRG+
Sbjct: 12  KEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGS 71

Query: 72  NTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           NTRTNF +H  + S LSLKIRNLL+QK S+K+
Sbjct: 72  NTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQ 103

[Close]

BLAST of MS010297 vs. ExPASy Swiss-Prot
Match: A0A1X9PY88 (Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.7e-30
Identity = 70/98 (71.43%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 9   KLGKFKDRTCKS---KFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDEAA 68
           K GKFK R   S   KFVGVRQRPSG+WVAEIKDTT  IRMWLGTF+TAEEAARAYDEAA
Sbjct: 19  KGGKFKGRNRNSNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAA 78

Query: 69  CLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           CLLRG+NTRTNF +H++  S L+ +IRNLLN K   K+
Sbjct: 79  CLLRGSNTRTNFITHVSLDSPLASRIRNLLNNKKGNKK 116

[Close]

BLAST of MS010297 vs. ExPASy Swiss-Prot
Match: A2Q5W1 (Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=ERN1 PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-29
Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = 0


Query: 7   SRKLGKFKDRTCKS----KFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYD 66
           + K GKFK R   S    KFVGVRQRPSG+WVAEIKDTT  IRMWLGTF+TAEEAARAYD
Sbjct: 20  TNKGGKFKGRNRNSNNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYD 79

Query: 67  EAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQK 99
           EAACLLRG+NTRTNF +H++  S L+ +IRNLLN +
Sbjct: 80  EAACLLRGSNTRTNFITHVSLDSPLASRIRNLLNNR 115

[Close]

BLAST of MS010297 vs. ExPASy Swiss-Prot
Match: A9Y0K8 (Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=ERN2 PE=1 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-27
Identity = 64/100 (64.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 3   EAVSSRKLGKFKDRTCKS----KFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAA 62
           +++  +K+ KFK R  KS    KFVGVRQRPSG++VAEIKDTT +IRMWLGTF+TAEEAA
Sbjct: 10  KSLRPKKVNKFKGRNKKSETRDKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAEEAA 69

Query: 63  RAYDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQK 99
           RAYDEAA LLRG+ TRTNF +H++  S L+ +IR+LLN +
Sbjct: 70  RAYDEAATLLRGSKTRTNFVTHVSYDSPLASRIRHLLNNR 109

[Close]

BLAST of MS010297 vs. ExPASy Swiss-Prot
Match: A9Y0K9 (Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=ERN3 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-25
Identity = 59/82 (71.95%), Postives = 70/82 (85.37%), Query Frame = 0


Query: 19  KSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDEAACLLRGANTRTNF- 78
           +SKFVGVRQR SGKW AEIKDT+ +IRMWLGT+KTAEEAARAYDEAA LLRG NTRTNF 
Sbjct: 22  RSKFVGVRQRASGKWAAEIKDTSKNIRMWLGTYKTAEEAARAYDEAAFLLRGTNTRTNFS 81

Query: 79  -TSHLNSKSILSLKIRNLLNQK 99
            T  + + S +SLK++NLL++K
Sbjct: 82  TTHSIPTNSPISLKLKNLLHRK 103

[Close]

BLAST of MS010297 vs. ExPASy TrEMBL
Match: A0A6J1DK11 (ethylene-responsive transcription factor RAP2-11 OS=Momordica charantia OX=3673 GN=LOC111021201 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.1e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   QLEAVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARA 60
           QLEAVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARA
Sbjct: 8   QLEAVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARA 67

Query: 61  YDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           YDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR
Sbjct: 68  YDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 110

[Close]

BLAST of MS010297 vs. ExPASy TrEMBL
Match: A0A6J1JC79 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=3661 GN=LOC111483721 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.0e-35
Identity = 82/100 (82.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 4   AVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDE 63
           +VS  K+GK KDR+ +  FVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAA AYDE
Sbjct: 41  SVSGSKIGKCKDRSRRRSFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAATAYDE 100

Query: 64  AACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           AA LLRGANTRTNF +HL S S LS KIRNLLNQKISLKR
Sbjct: 101 AARLLRGANTRTNFATHLKSTSALSFKIRNLLNQKISLKR 140

[Close]

BLAST of MS010297 vs. ExPASy TrEMBL
Match: A0A6J1FVD0 (ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3662 GN=LOC111448784 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.0e-35
Identity = 81/100 (81.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 4   AVSSRKLGKFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDE 63
           +VS  K+GK KDR+ +  FVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAA AYDE
Sbjct: 16  SVSGSKVGKCKDRSRRCSFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAATAYDE 75

Query: 64  AACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           AA LLRGANTRTNF +HL S   LS KIRNLLNQKISLKR
Sbjct: 76  AARLLRGANTRTNFATHLKSTPALSFKIRNLLNQKISLKR 115

[Close]

BLAST of MS010297 vs. ExPASy TrEMBL
Match: A0A6A6KCS5 (AP2/ERF domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_012152 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.4e-34
Identity = 79/107 (73.83%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   QLEAVSSRKLGKFKDR----TCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEE 60
           Q + VS  K  KFK+R    TC+SKFVGVRQRPSGKWVAEIKDTT  IRMWLGTF TAEE
Sbjct: 8   QPKGVSPNKQSKFKERSTASTCRSKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFDTAEE 67

Query: 61  AARAYDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           AARAYDEAACLLRG+NTRTNFT+H+ + S +S+KIRNLLN K SLK+
Sbjct: 68  AARAYDEAACLLRGSNTRTNFTTHIPTNSPISMKIRNLLNHKKSLKQ 114

[Close]

BLAST of MS010297 vs. ExPASy TrEMBL
Match: A0A2I4FS94 (ethylene-responsive transcription factor ERN1 OS=Juglans regia OX=51240 GN=LOC109001630 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.0e-32
Identity = 76/105 (72.38%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 1   QLEAVSSRKLGKFKDRT---CKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEA 60
           Q + VS+ K   +K RT   C+ KFVGVRQRPSGKWVAEIKDTTH IRMWLGTF+TAEEA
Sbjct: 10  QHKGVSANKQSNYKQRTTNYCRKKFVGVRQRPSGKWVAEIKDTTHKIRMWLGTFETAEEA 69

Query: 61  ARAYDEAACLLRGANTRTNFTSHLNSKSILSLKIRNLLNQKISLK 103
           ARAYDEAACLLRGANTRTNF +H++  S LSLKI+NLL+QK ++K
Sbjct: 70  ARAYDEAACLLRGANTRTNFATHVSPDSPLSLKIKNLLHQKKTMK 114

[Close]

BLAST of MS010297 vs. TAIR 10
Match: AT5G19790.1 (related to AP2 11 )

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-33
Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 12  KFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDEAACLLRGA 71
           K K +  K+KFVGVRQRPSGKWVAEIKDTT  IRMWLGTF+TAEEAARAYDEAACLLRG+
Sbjct: 12  KEKSKGNKTKFVGVRQRPSGKWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGS 71

Query: 72  NTRTNFTSHLNSKSILSLKIRNLLNQKISLKR 104
           NTRTNF +H  + S LSLKIRNLL+QK S+K+
Sbjct: 72  NTRTNFANHFPNNSQLSLKIRNLLHQKQSMKQ 103

[Close]

BLAST of MS010297 vs. TAIR 10
Match: AT1G53910.1 (related to AP2 12 )

HSP 1 Score: 81.3 bits (199), Expect = 5.1e-16
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 12  KFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDEAACLLRGA 71
           K  +R  K+++ G+RQRP GKW AEI+D     R+WLGTFKTAEEAARAYD AA  +RG+
Sbjct: 115 KSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGS 174

Query: 72  NTRTNF 78
             + NF
Sbjct: 175 KAKVNF 180

[Close]

BLAST of MS010297 vs. TAIR 10
Match: AT1G53910.2 (related to AP2 12 )

HSP 1 Score: 81.3 bits (199), Expect = 5.1e-16
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 12  KFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDEAACLLRGA 71
           K  +R  K+++ G+RQRP GKW AEI+D     R+WLGTFKTAEEAARAYD AA  +RG+
Sbjct: 115 KSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGS 174

Query: 72  NTRTNF 78
             + NF
Sbjct: 175 KAKVNF 180

[Close]

BLAST of MS010297 vs. TAIR 10
Match: AT1G53910.3 (related to AP2 12 )

HSP 1 Score: 81.3 bits (199), Expect = 5.1e-16
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 12  KFKDRTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFKTAEEAARAYDEAACLLRGA 71
           K  +R  K+++ G+RQRP GKW AEI+D     R+WLGTFKTAEEAARAYD AA  +RG+
Sbjct: 113 KSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGS 172

Query: 72  NTRTNF 78
             + NF
Sbjct: 173 KAKVNF 178

[Close]

BLAST of MS010297 vs. TAIR 10
Match: AT2G47520.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 5.1e-16
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 1   QLEAVSSRK------LGKFKD--RTCKSKFVGVRQRPSGKWVAEIKDTTHDIRMWLGTFK 60
           QL +VSSRK      + + +D  R  K+ + G+RQRP GKW AEI+D +  +R+WLGTFK
Sbjct: 21  QLGSVSSRKKRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFK 80

Query: 61  TAEEAARAYDEAACLLRGANTRTNF 78
           TA+EAARAYD AA  +RG   + NF
Sbjct: 81  TADEAARAYDVAAIKIRGRKAKLNF 105

The following BLAST results are available for this feature:

BLAST of MS010297 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153759.1	1.3e-48	100.00	ethylene-responsive transcription factor RAP2-11 [Momordica charantia]	[more]
XP_022985763.1	2.1e-35	82.00	ethylene-responsive transcription factor RAP2-11-like [Cucurbita maxima] >XP_022...	[more]
XP_023512705.1	2.7e-35	82.00	ethylene-responsive transcription factor RAP2-11-like [Cucurbita pepo subsp. pep...	[more]
KAG6570315.1	3.6e-35	81.00	Ethylene-responsive transcription factor ERN1, partial [Cucurbita argyrosperma s...	[more]
KAG7010209.1	3.6e-35	81.00	Ethylene-responsive transcription factor RAP2-11, partial [Cucurbita argyrosperm...	[more]

BLAST of MS010297 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6J9S1	2.2e-32	77.17	Ethylene-responsive transcription factor RAP2-11 OS=Arabidopsis thaliana OX=3702...	[more]
A0A1X9PY88	4.7e-30	71.43	Ethylene-responsive transcription factor ERN1 OS=Lotus japonicus OX=34305 GN=ERN...	[more]
A2Q5W1	1.0e-29	70.83	Ethylene-responsive transcription factor ERN1 OS=Medicago truncatula OX=3880 GN=...	[more]
A9Y0K8	2.2e-27	64.00	Ethylene-responsive transcription factor ERN2 OS=Medicago truncatula OX=3880 GN=...	[more]
A9Y0K9	5.9e-25	71.95	Ethylene-responsive transcription factor ERN3 OS=Medicago truncatula OX=3880 GN=...	[more]

BLAST of MS010297 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DK11	6.1e-49	100.00	ethylene-responsive transcription factor RAP2-11 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1JC79	1.0e-35	82.00	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1FVD0	5.0e-35	81.00	ethylene-responsive transcription factor RAP2-11-like OS=Cucurbita moschata OX=3...	[more]
A0A6A6KCS5	9.4e-34	73.83	AP2/ERF domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_012152 ...	[more]
A0A2I4FS94	1.0e-32	72.38	ethylene-responsive transcription factor ERN1 OS=Juglans regia OX=51240 GN=LOC10...	[more]

BLAST of MS010297 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19790.1	1.6e-33	77.17	related to AP2 11	[more]
AT1G53910.1	5.1e-16	57.58	related to AP2 12	[more]
AT1G53910.2	5.1e-16	57.58	related to AP2 12	[more]
AT1G53910.3	5.1e-16	57.58	related to AP2 12	[more]
AT2G47520.1	5.1e-16	51.76	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 22..33 score: 56.97 coord: 44..60 score: 69.2
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 21..84 e-value: 4.6E-35 score: 132.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 20..70 e-value: 5.5E-14 score: 52.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 21..78 score: 19.506361
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 20..77 e-value: 4.67313E-32 score: 105.046
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 20..79 e-value: 6.3E-23 score: 82.7
None	No IPR available	PANTHER	PTHR31194:SF1	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2	coord: 9..102
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 9..102
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 20..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010297.1	MS010297.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity