MS010291 (gene) Bitter gourd (TR) v1

Overview


Name	MS010291
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	inactive protein RESTRICTED TEV MOVEMENT 2-like
Location	scaffold391: 1416373 .. 1416920 (-)
RNA-Seq Expression	MS010291
Synteny	MS010291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCAATCGTCAACGAACTTATGAAGATTTTGAACCTCCGGTGGAGTCGTCACAAGAGGACGGCTGCAGCATCCTCACCATATACCTTCCTGGTTAGTCGTCCATAGTTTCCACCTTAAATGCTACTTTAACATGTTTGGATGATCGCTCTCCTTTTGCATCACAAACTCCATAGTTGGAGTTCACCCAGATTCAAAACAAAGCACAAGGCCTTTTCTTCTAACGGTCTTCTCTCATTCTGCAGGTTTCAGTAAAGAGCAAATCCGAGTTCAGGTATCCTCCACAGGAAAGTTGAGGATTTCTGGTGAACGGCCTTATCGAAATAAGGCATGGCAGCGCTTCCACAAGGAGTTTCAGATCCCACCAAACTGCGACACGAGTAGCATCACAGCAAAGTACAAGGGCGGCATACTTCATGTCCGCCAGCCATTACGGGAAGAGTCGAAGCAACAAGCGGCGGAAGCACCCAAAGCACAGCCACCAGAACAGCAAAGTGCCAAACAAAAACAAGCAGAGGCTCCAGAGAAGAAGAGCAATGTTGCG

mRNA sequence

ATGGCAGCCAATCGTCAACGAACTTATGAAGATTTTGAACCTCCGGTGGAGTCGTCACAAGAGGACGGCTGCAGCATCCTCACCATATACCTTCCTGGTTTCAGTAAAGAGCAAATCCGAGTTCAGGTATCCTCCACAGGAAAGTTGAGGATTTCTGGTGAACGGCCTTATCGAAATAAGGCATGGCAGCGCTTCCACAAGGAGTTTCAGATCCCACCAAACTGCGACACGAGTAGCATCACAGCAAAGTACAAGGGCGGCATACTTCATGTCCGCCAGCCATTACGGGAAGAGTCGAAGCAACAAGCGGCGGAAGCACCCAAAGCACAGCCACCAGAACAGCAAAGTGCCAAACAAAAACAAGCAGAGGCTCCAGAGAAGAAGAGCAATGTTGCG

Coding sequence (CDS)

ATGGCAGCCAATCGTCAACGAACTTATGAAGATTTTGAACCTCCGGTGGAGTCGTCACAAGAGGACGGCTGCAGCATCCTCACCATATACCTTCCTGGTTTCAGTAAAGAGCAAATCCGAGTTCAGGTATCCTCCACAGGAAAGTTGAGGATTTCTGGTGAACGGCCTTATCGAAATAAGGCATGGCAGCGCTTCCACAAGGAGTTTCAGATCCCACCAAACTGCGACACGAGTAGCATCACAGCAAAGTACAAGGGCGGCATACTTCATGTCCGCCAGCCATTACGGGAAGAGTCGAAGCAACAAGCGGCGGAAGCACCCAAAGCACAGCCACCAGAACAGCAAAGTGCCAAACAAAAACAAGCAGAGGCTCCAGAGAAGAAGAGCAATGTTGCG

Protein sequence

MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNKAWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQKQAEAPEKKSNVA

Homology

[Close]

BLAST of MS010291 vs. NCBI nr
Match: XP_022153773.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Momordica charantia])

HSP 1 Score: 257.7 bits (657), Expect = 5.5e-65
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 60
           MA NRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK
Sbjct: 41  MAVNRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 100

Query: 61  AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQK 120
           AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQK
Sbjct: 101 AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQK 160

Query: 121 QAEAPEKKSNVA 133
           QAEAPEKKSNVA
Sbjct: 161 QAEAPEKKSNVA 172

[Close]

BLAST of MS010291 vs. NCBI nr
Match: XP_022995333.1 (uncharacterized protein LOC111490909 [Cucurbita maxima])

HSP 1 Score: 173.7 bits (439), Expect = 1.0e-39
Identity = 94/136 (69.12%), Postives = 106/136 (77.94%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 60
           MA   Q TYEDFEP VE+S+EDGCSIL++++PGF KEQIRVQVSST KLRISGERPYRNK
Sbjct: 1   MAPKNQPTYEDFEPLVEASEEDGCSILSLHIPGFRKEQIRVQVSSTRKLRISGERPYRNK 60

Query: 61  AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLR----EESKQQAAEAPKAQPPEQQS 120
            WQRFHKEF+IP NC TS ITAKYK GILHVRQPL+     E  + AA  P   PP+QQ 
Sbjct: 61  TWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRSAAPNP-PPPPQQQK 120

Query: 121 AKQKQAEAPEKKSNVA 133
             Q+QAE PEKKS+ A
Sbjct: 121 NGQQQAEDPEKKSSPA 135

[Close]

BLAST of MS010291 vs. NCBI nr
Match: KAG6605846.1 (Inactive protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39
Identity = 92/135 (68.15%), Postives = 106/135 (78.52%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 60
           MA   Q TYEDFEP VE+S+EDGCSIL++++PGF +EQIRVQVSST KLRISGERPYRNK
Sbjct: 1   MAPKNQPTYEDFEPLVEASEEDGCSILSLHVPGFRREQIRVQVSSTRKLRISGERPYRNK 60

Query: 61  AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREE--SKQQAAEAPKAQPPEQQSAK 120
            WQRFHKEF+IP NC TS ITAKYK GILHVRQPL+ +  S+     AP   PP+QQ   
Sbjct: 61  TWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQN 120

Query: 121 -QKQAEAPEKKSNVA 133
            Q+QAE PEKKS+ A
Sbjct: 121 GQQQAEEPEKKSSPA 135

[Close]

BLAST of MS010291 vs. NCBI nr
Match: XP_022958345.1 (inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 4.0e-39
Identity = 91/135 (67.41%), Postives = 107/135 (79.26%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 60
           MA   Q TYEDFEP VE+S+EDGCSIL++++PGF +EQIRVQVSST KLRISGERPY+NK
Sbjct: 1   MAPKNQPTYEDFEPLVEASEEDGCSILSLHVPGFRREQIRVQVSSTRKLRISGERPYQNK 60

Query: 61  AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREE--SKQQAAEAPKAQPPEQQSAK 120
            WQRFHKEF+IP NC TS+ITAKYK GILHVRQPL+ +  S+     AP   PP+QQ   
Sbjct: 61  TWQRFHKEFEIPSNCTTSNITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQN 120

Query: 121 -QKQAEAPEKKSNVA 133
            Q+QAE PEKKS+ A
Sbjct: 121 GQQQAEEPEKKSSPA 135

[Close]

BLAST of MS010291 vs. NCBI nr
Match: XP_023534144.1 (uncharacterized protein LOC111795792 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.5 bits (423), Expect = 7.5e-38
Identity = 92/136 (67.65%), Postives = 106/136 (77.94%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 60
           MA   Q TYEDFEP VE+S+EDGCSIL++++PGF +EQIRVQVSST KLRISGERPYRNK
Sbjct: 1   MAPKNQPTYEDFEPLVEASEEDGCSILSLHVPGFRREQIRVQVSSTRKLRISGERPYRNK 60

Query: 61  AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLR----EESKQQAAEAPKAQPPEQQS 120
             QRFHKEF+IP NC TS+ITAKYK GILHVRQPL+     E  + AA  P   PP+QQ 
Sbjct: 61  TLQRFHKEFEIPSNCTTSNITAKYKDGILHVRQPLQPQDVSEPPRTAAPNP-PPPPQQQQ 120

Query: 121 AKQKQAEAPEKKSNVA 133
             Q+QAE PEKKS+ A
Sbjct: 121 NGQQQAEEPEKKSSPA 135

[Close]

BLAST of MS010291 vs. ExPASy Swiss-Prot
Match: D5K211 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 1   MAANRQR-------TYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRV-QVSSTGKLRIS 60
           MAA +Q+        YEDF P  E   +   +IL I L GF+KEQ++V  V S+  +R++
Sbjct: 1   MAARQQQKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVT 60

Query: 61  GERPYRNKAWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQP---------LREESKQQA 120
           GERP  N+ W RF++ F +P NC    I   +K  +L +  P         L E S+ +A
Sbjct: 61  GERPLANRKWNRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEA 120

Query: 121 AEAPKAQPPEQ----QSAKQKQAEAPEKK 129
           A   KA   E+    + +++K+ E  E K
Sbjct: 121 AALEKAAKLEEKRLLEESRRKEKEEEEAK 149

[Close]

BLAST of MS010291 vs. ExPASy Swiss-Prot
Match: D9UBX6 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 1   MAANRQR-------TYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRV-QVSSTGKLRIS 60
           MAA +Q+        YEDF P  E   +   +IL I L GF+KEQ++V  V S+  +R++
Sbjct: 1   MAARQQQKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVT 60

Query: 61  GERPYRNKAWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQP---------LREESKQQA 120
           GERP  N+ W RF++ F +P NC    I   +K  +L +  P         L E S+ +A
Sbjct: 61  GERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEA 120

Query: 121 AEAPKAQPPEQ----QSAKQKQAEAPEKK 129
           A   KA   E+    + +++K+ E  E K
Sbjct: 121 AALEKAAKLEEKRLLEESRRKEKEEEEAK 149

[Close]

BLAST of MS010291 vs. ExPASy Swiss-Prot
Match: D9UBX4 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 1   MAANRQR-------TYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRV-QVSSTGKLRIS 60
           MAA +Q+        YEDF P  E   +   +IL I L GF+KEQ++V  V S+  +R++
Sbjct: 1   MAARQQQKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVT 60

Query: 61  GERPYRNKAWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQP---------LREESKQQA 120
           GERP  N+ W RF++ F +P NC    I   +K  +L +  P         L E S+ +A
Sbjct: 61  GERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEA 120

Query: 121 AEAPKAQPPEQ----QSAKQKQAEAPEKK 129
           A   KA   E+    + +++K+ E  E K
Sbjct: 121 AALEKAAKLEEKRLLEESRRKEKEEEEAK 149

[Close]

BLAST of MS010291 vs. ExPASy Swiss-Prot
Match: Q9M670 (Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 1   MAANRQR-------TYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRV-QVSSTGKLRIS 60
           MAA +Q+        YEDF P  E   +   +IL I L GF+KEQ++V  V S+  +R++
Sbjct: 1   MAARQQQKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVT 60

Query: 61  GERPYRNKAWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQP---------LREESKQQA 120
           GERP  N+ W RF++ F +P NC    I   +K  +L +  P         L E S+ +A
Sbjct: 61  GERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEA 120

Query: 121 AEAPKAQPPEQ----QSAKQKQAEAPEKK 129
           A   KA   E+    + +++K+ E  E K
Sbjct: 121 AALEKAAKLEEKRLLEESRRKEKEEEEAK 149

[Close]

BLAST of MS010291 vs. ExPASy Swiss-Prot
Match: D9UC01 (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 1   MAANRQR-------TYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRV-QVSSTGKLRIS 60
           MAA +Q+        YEDF P  E   +   +IL I L GF+KEQ++V  V S+  +R++
Sbjct: 1   MAARQQQKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVT 60

Query: 61  GERPYRNKAWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQP---------LREESKQQA 120
           GERP  N+ W RF++ F +P NC    I   +K  +L +  P         L E S+ +A
Sbjct: 61  GERPLANRKWNRFNEVFTVPQNCLVDKIHGSFKKNVLTITMPKETITKVAYLPETSRTEA 120

Query: 121 AEAPKAQPPEQ----QSAKQKQAEAPEKK 129
           A   KA   E+    + +++K+ E  E K
Sbjct: 121 AALEKAAKLEEKRLLEESRRKEKEEEEAK 149

[Close]

BLAST of MS010291 vs. ExPASy TrEMBL
Match: A0A6J1DIF9 (inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Momordica charantia OX=3673 GN=LOC111021212 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.7e-65
Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 60
           MA NRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK
Sbjct: 41  MAVNRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 100

Query: 61  AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQK 120
           AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQK
Sbjct: 101 AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQK 160

Query: 121 QAEAPEKKSNVA 133
           QAEAPEKKSNVA
Sbjct: 161 QAEAPEKKSNVA 172

[Close]

BLAST of MS010291 vs. ExPASy TrEMBL
Match: A0A6J1K7M4 (uncharacterized protein LOC111490909 OS=Cucurbita maxima OX=3661 GN=LOC111490909 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.1e-40
Identity = 94/136 (69.12%), Postives = 106/136 (77.94%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 60
           MA   Q TYEDFEP VE+S+EDGCSIL++++PGF KEQIRVQVSST KLRISGERPYRNK
Sbjct: 1   MAPKNQPTYEDFEPLVEASEEDGCSILSLHIPGFRKEQIRVQVSSTRKLRISGERPYRNK 60

Query: 61  AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLR----EESKQQAAEAPKAQPPEQQS 120
            WQRFHKEF+IP NC TS ITAKYK GILHVRQPL+     E  + AA  P   PP+QQ 
Sbjct: 61  TWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRSAAPNP-PPPPQQQK 120

Query: 121 AKQKQAEAPEKKSNVA 133
             Q+QAE PEKKS+ A
Sbjct: 121 NGQQQAEDPEKKSSPA 135

[Close]

BLAST of MS010291 vs. ExPASy TrEMBL
Match: A0A6J1H377 (inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucurbita moschata OX=3662 GN=LOC111459593 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.9e-39
Identity = 91/135 (67.41%), Postives = 107/135 (79.26%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK 60
           MA   Q TYEDFEP VE+S+EDGCSIL++++PGF +EQIRVQVSST KLRISGERPY+NK
Sbjct: 1   MAPKNQPTYEDFEPLVEASEEDGCSILSLHVPGFRREQIRVQVSSTRKLRISGERPYQNK 60

Query: 61  AWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREE--SKQQAAEAPKAQPPEQQSAK 120
            WQRFHKEF+IP NC TS+ITAKYK GILHVRQPL+ +  S+     AP   PP+QQ   
Sbjct: 61  TWQRFHKEFEIPSNCTTSNITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQN 120

Query: 121 -QKQAEAPEKKSNVA 133
            Q+QAE PEKKS+ A
Sbjct: 121 GQQQAEEPEKKSSPA 135

[Close]

BLAST of MS010291 vs. ExPASy TrEMBL
Match: A0A0A0L1N9 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G269140 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29
Identity = 75/119 (63.03%), Postives = 90/119 (75.63%), Query Frame = 0


Query: 7   RTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK---AWQ 66
           RTYEDFEPPVE S+EDGC+IL +Y+PGF+KEQI+VQVSS  KLRISGER  +N      Q
Sbjct: 9   RTYEDFEPPVEQSEEDGCTILALYIPGFNKEQIKVQVSSKRKLRISGERALKNNNKHIMQ 68

Query: 67  RFHKEFQIPPNCDTSSITAKYKGGILHVRQPLRE---ESKQQAAEAPKAQPPEQQSAKQ 120
           RF+KEF+IP NC+T++ITAKYK GILHVRQPL++   +SKQQ    P     E Q  KQ
Sbjct: 69  RFNKEFEIPSNCNTTNITAKYKSGILHVRQPLQQDQSDSKQQPHHNPIL---EDQKVKQ 124

[Close]

BLAST of MS010291 vs. ExPASy TrEMBL
Match: A0A5A7T9W8 (Circumsporozoite protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00740 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.8e-29
Identity = 72/113 (63.72%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 7   RTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNK---AWQ 66
           RTYEDFEPPVE S+EDGC ILT+Y+PGF KEQI+VQVSS  KLRISGER  ++      Q
Sbjct: 9   RTYEDFEPPVERSEEDGCIILTLYIPGFDKEQIKVQVSSKRKLRISGERALKSNNKHTMQ 68

Query: 67  RFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREE---SKQQAAEAPKAQPPE 114
           RF+KEF+IP NC+T++ITAKYK GILHVRQPL+++   SKQQ    P  +  E
Sbjct: 69  RFYKEFEIPSNCNTANITAKYKSGILHVRQPLQQDQSNSKQQPHHNPILEDQE 121

[Close]

BLAST of MS010291 vs. TAIR 10
Match: AT2G27140.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 8.9e-21
Identity = 56/129 (43.41%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 3   ANRQRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNKAW 62
           AN  R Y++FEP      E G   LTIYLPGF KEQ++VQV++T KLR+ G+RP     W
Sbjct: 8   ANANRIYDEFEPLSNWKTEQGFEALTIYLPGFRKEQLKVQVTTTRKLRVMGDRPAGANKW 67

Query: 63  QRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQKQA 122
            RF KEF IPPN D  S++AK++G  L VR P  E   +Q +    A  P     +    
Sbjct: 68  IRFRKEFPIPPNIDVDSVSAKFEGANLVVRLPRTEPMGKQPSPIGTATKPPPVPKENPNL 127

Query: 123 EAPEKKSNV 132
            +P  K  V
Sbjct: 128 PSPSAKEKV 136

[Close]

BLAST of MS010291 vs. TAIR 10
Match: AT5G20970.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 0


Query: 6   QRTYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRVQVSSTGKLRISGERPYRNKAWQRF 65
           +R Y++FEP    + E    +L   LPGF KEQ++V V++T KLR++GERP     W RF
Sbjct: 7   ERVYQEFEPATRWTSEPDAEVLVADLPGFKKEQLKVSVTATRKLRLTGERPTGGNKWIRF 66

Query: 66  HKEFQIPPNCDTSSITAKYKGGILHVRQP-LREESKQQAAEAPKAQPPEQQSAKQKQAEA 125
           H+E  +P   D  S++A +K   L++R P L+ E  Q     P    P  Q  ++KQ + 
Sbjct: 67  HQEIPVPLTVDIDSVSAMFKDNKLYIRHPKLKTEIPQTKPPTPVIMKPHDQH-ERKQGQG 126

Query: 126 PE 127
           P+
Sbjct: 127 PK 127

[Close]

BLAST of MS010291 vs. TAIR 10
Match: AT5G04890.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 1   MAANRQR-------TYEDFEPPVESSQEDGCSILTIYLPGFSKEQIRV-QVSSTGKLRIS 60
           MAA +Q+        YEDF P  E   +   +IL I L GF+KEQ++V  V S+  +R++
Sbjct: 1   MAARQQQKGTGFGVQYEDFVPKSEWKDQPEATILNIDLTGFAKEQMKVTYVHSSKMIRVT 60

Query: 61  GERPYRNKAWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQP---------LREESKQQA 120
           GERP  N+ W RF++ F +P NC    I   +K  +L +  P         L E S+ +A
Sbjct: 61  GERPLANRKWSRFNEVFTVPQNCLVDKIHGSFKNNVLTITMPKETITKVAYLPETSRTEA 120

Query: 121 AEAPKAQPPEQ----QSAKQKQAEAPEKK 129
           A   KA   E+    + +++K+ E  E K
Sbjct: 121 AALEKAAKLEEKRLLEESRRKEKEEEEAK 149

[Close]

BLAST of MS010291 vs. TAIR 10
Match: AT1G54400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 8.6e-08
Identity = 33/119 (27.73%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 1   MAANRQRTYEDFEPPVESSQEDGCSILTIYLP-GFSKEQIRVQVSSTGKLRISGERPYRN 60
           M  ++   Y++ EP     + +   IL ++LP G  KE +++Q++++G L I+G  P   
Sbjct: 5   MEGSQTHFYDEIEPFCRWRRTEDIDILELHLPSGLKKEHLKIQINNSGVLTITGGCPVDQ 64

Query: 61  KAWQRFHKEFQIPPNCDTSSITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAK 119
               RF KE ++  +C  + I AK+  G+L+V  P         + + K   P+ Q+ K
Sbjct: 65  TKTIRFMKETKVAKDCKRNEIRAKFSKGVLYVTMPKTIPIAAGLSVSLKGATPQHQTPK 123

[Close]

BLAST of MS010291 vs. TAIR 10
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 28/107 (26.17%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 31  LPGFSKEQIRVQVSSTGKLRISGERPYR-----------NKAWQRFHKEFQIPPNCDTSS 90
           +PG  K++++++V   G LR+SGER               +++ +F ++F++P N D  S
Sbjct: 88  IPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMES 147

Query: 91  ITAKYKGGILHVRQPLREESKQQAAEAPKAQPPEQQSAKQKQAEAPE 127
           + AK + G+L +        K +          E Q+AK   +E+ E
Sbjct: 148 VKAKLENGVLTINLTKLSPEKVKGPRVVNIAAEEDQTAKISSSESKE 194

The following BLAST results are available for this feature:

BLAST of MS010291 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153773.1	5.5e-65	99.24	inactive protein RESTRICTED TEV MOVEMENT 2-like [Momordica charantia]	[more]
XP_022995333.1	1.0e-39	69.12	uncharacterized protein LOC111490909 [Cucurbita maxima]	[more]
KAG6605846.1	1.8e-39	68.15	Inactive protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subs...	[more]
XP_022958345.1	4.0e-39	67.41	inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita moschata]	[more]
XP_023534144.1	7.5e-38	67.65	uncharacterized protein LOC111795792 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS010291 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D5K211	1.6e-11	34.23	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX6	1.6e-11	34.23	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
D9UBX4	1.6e-11	34.23	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9M670	1.6e-11	34.23	Protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RTM2 PE=1 S...	[more]
D9UC01	2.8e-11	34.23	Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]

BLAST of MS010291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DIF9	2.7e-65	99.24	inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1K7M4	5.1e-40	69.12	uncharacterized protein LOC111490909 OS=Cucurbita maxima OX=3661 GN=LOC111490909...	[more]
A0A6J1H377	1.9e-39	67.41	inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0L1N9	1.4e-29	63.03	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G269140 PE=3 S...	[more]
A0A5A7T9W8	1.8e-29	63.72	Circumsporozoite protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of MS010291 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27140.1	8.9e-21	43.41	HSP20-like chaperones superfamily protein	[more]
AT5G20970.1	1.3e-16	37.70	HSP20-like chaperones superfamily protein	[more]
AT5G04890.1	1.2e-12	34.23	HSP20-like chaperones superfamily protein	[more]
AT1G54400.1	8.6e-08	27.73	HSP20-like chaperones superfamily protein	[more]
AT4G10250.1	1.8e-05	26.17	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 1..103 e-value: 1.5E-21 score: 78.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 8..102
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 27..101 e-value: 1.7E-10 score: 40.9
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 7..110 score: 18.891567
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR43670:SF73	OS03G0656000 PROTEIN	coord: 2..124
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 26..92 e-value: 5.85738E-20 score: 76.0536
IPR045045	Small heat shock protein RTM2-like	PANTHER	PTHR43670	HEAT SHOCK PROTEIN 26	coord: 2..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010291.1	MS010291.1	mRNA