MS010281 (gene) Bitter gourd (TR) v1

Overview


Name	MS010281
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Location	scaffold391: 1359570 .. 1363145 (+)
RNA-Seq Expression	MS010281
Synteny	MS010281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGAGCTGAGTTGGAGACATCATACTCTCATTCAAGCGCTACTCGCACGCGGCCCACTAAGAGAGGATCAGTTTCATTTGATGTTTACGCGCATCACTGGAAAGAGCCCAGGTTTGAAATTATTTATACTTTCCCCGTTTGATATCCAAGTTGGGAAGTAATGATTTAAGGGTACGGAGTCCTGCTCGATTTTGTCTAACAAACAATGCAGTGTGTTCTTAATATTTGCAATGTAATGGTTTCTGAATCTTATTTTAATGAACCTCATACTGGAAGAAATTGCATCTGGGTTCATATCAGTGTACGTGTTCGGAATGGGCATCCCTTTCGGCGGTTGCTTCAGAGGGAATATAATGTTTTGTTTTATTTTTTCCAAAGGTTATAATCTGTATTCTTATAGACCGCATACACCTCCCTATCATCACGCCTTTCTCTGTCCCTAATCATTAGCATAATCGATTGTAAAAGAAGAATATTTTTAATTGATTGTTTATCAGGATATAATGTACACATTTTTTTTTTTGATATCTGTGAGTGTTCGGATCAACTTGTGTGTATCTCGGCTATACACATACTAGCCCATGGATAGCACTCTCTACTGTTGCATTTATGCATTTTACTGAAAACTTTTAGTTCGATATTTGTTTTGGTGCAGATAATGACCAGCAGCTGTTTAATAATTACCTCCTGGCGATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGTCGTGTTTATTATGGCTTGGTCAATAACGTATCTGACGAGCAATCCAAACTGGGAACAAAATATTCAGTTCCACAGATTGCCTTCTACAAAGCCATTGTGAGGTTCTTCAGTCTTTTCTTTCTTTCTTTCTTACCGTTCAACATCCGTAATATATAGATTAAGCTGTTACCATTGCCATTTTCACTGGATTAATTATGAATGTATATGGATGGCCTTCTCATCCTCTTCTTAGTTATACTAGAACAAAGACAAGGAAATCTACCAATTAGCCAAAGAGTTGCAAAAAACTCCCTCTTGAATATCAAAAGAAGAATAGTTATAGAGCTATTAAGGAGAGTACATCATCTAGAAACCCATAGATAATTCTATCAGAAGTCTCATGTTGAATAGAGAAGGCTTTCTCAAAAGTTAACTGCTTTCTTTCAAACCAAATAGCCTTGAAGATTGTATCCACCAAGAGCCGCCAAAATATATTCATCTTATCAAGGAAACTCATGCCAAACAAGCACTGAAAAATTTGCACTCCGACCATCTTGCGGTTGCACCTACATGAATATATTGTTGAAATATGTTATGGCTTTCTCATCTCTTATGATGTTTATATTGTAATCTCAAGTACTAATTGATTATTCTCATCGTTATTAGCCCATACTCGTTTATAAGTTGTAAAACATTCCCACTCAACAGACAGACTCACTCATCAGTTTAGGGCTTTGCCAATTCTCCCTAGAGCTCTGAGAGAAGTCTGAGTGAGCAGTGAGGACTATCTGCTTTGGAACTTTGATTGTTAGCTGCTTTGGGTTTAGTGGCTTTAACTGCTTAGGGTTCATGCTACATCATTTATTGAAATATAGAAAATGAGAAGTATTGGTGTTCTTTAATAATTTAGTGTTCATAATATATGAACTGAACCTTTTGTTTTGTTTTGTTGATGTTGTTGTAGTATTTCATATAAAAACTTTGGGTATGTCAGGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGAGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGGTTTCTCTCGTTTATCTTTGACCAATACGACCGTTTTTTCTAGCCCATTCTACTGAAGTGTGATGCTTGCATTCTTTTGAGCCCATTATTGTCAAAGTGAGCTGCATATTTAACGGAAATTGGAATCTCTGGTCTTTTGCGTTATAATTAATACTAATTCCAGTCACCACGTTATATAGTGTACTCTTGACAAGAACATTCTTCACAGTTGTCATGTTTATTGGGAGAAAATAATTTTTTGGAACGAGTTTGCGAGAGTATCGATTGATATTTAGATTATATCACTTGTAGAAGGTTACTAGTCATTGAAAAGTGACATCTTTAGTCAGCACCTAGCTAGTTATAGAAACAATGATAAATTTCCGTCAAAATAGTCAAGGGGTGTGCAGACTGTCTTGGGCACTTATGGATATATATATATATACATATATATATAAGAATCCGTCGACAAATTTTTAGATATTGAGAATGGAGTGCCAAGCGTTTTGTACATGCCTACATGGTAAAGGCCCGTATCTAATCAATCAAATTTGGATACTGGGAGCTGTTAGGCTGACAGTGGTCTAATGACTAAAGTATTTCTTGATACGTTTACTTCTTTGTGGCCTCTTCAACTTTGAGGTGAATGAAATTTGCTTTAGAGGCACTCCTGAGTTTTTCATTTTATTTTTAATATCATTTGTTAAATTTAAAACTAAGAGTCCAAGACCACTCTTAAATTCTACATCATTTGGTTGCAAGAGTTTTGCTTGCCACTTATGGTGGGTAAGTTGAGAATTGACAGAAGTTTCCTGTTCCTTGTATTTGTATGCCGTTGTCTGCTTCTCCACATATTTAAGAATCCTATTGTATAATCTTCGCATGCATTATTTGATTATTACTGTTTTATTACTGGCAGCTGGGGGATATGGGGTCCCAGTCGTCTCAAGTCATCCCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTTGCACAGGATCAGTGGCTTAACTGCACTCCTGATGGTTTTGTAAATCTGGGTGTCAGATCGTTTCTTGATCTGCGAAGTTGGTTCCGCACTAATGATATACCTTCATGCGAAGTGTGCAACGAGGCTGGAGTGAAGGTTCTGTTCTTTCATTTTGTTTCTATTCTATAATTTACCCTAGTGAGCAGGCTCCTATAAAGTCGATCATCATTTTATCTCAATTCTTTATGCTGCATTATTTTCCCCAGTCCCCACACTGATGGGAAAACCTGAACATTTGATGAAAAGGATTTTATGTTGGTCACGCAATTTGTTTGGATTTCAACATGATTTAAGCTCCATATATCTTTGCTTGATTTGTTATTCACAGGCAGAGTTGTGCGATAATGAAGGTTGCACTGTCCGTGTACATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAATGGTAACATGATGTGGCTGCCTTTTTAACCCACTGTTTAAAATTTTTAATCTACAAGTTCTCTTGTACCTAACAGTTCTATATTTGACTATTATCAGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTAAATGGCGATCTACAGTAACCAATATGGAGTCCAAGGAAGAAGAGGATGAGCCAGATAGGCGCACTCAAGGCCAGTCATCATCACAGAGAAGGAAGAAATCTAGATTGAACATAGACATGGATTCAGATTCAAATGGAGCCAGTGCTTCCCAACCTCCTCCAGAGACAAGGAGAGTAACGCGAAGTTCTGCCCGCCAGAGG

mRNA sequence

ATGCGAGAGCTGAGTTGGAGACATCATACTCTCATTCAAGCGCTACTCGCACGCGGCCCACTAAGAGAGGATCAGTTTCATTTGATGTTTACGCGCATCACTGGAAAGAGCCCAGATAATGACCAGCAGCTGTTTAATAATTACCTCCTGGCGATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGTCGTGTTTATTATGGCTTGGTCAATAACGTATCTGACGAGCAATCCAAACTGGGAACAAAATATTCAGTTCCACAGATTGCCTTCTACAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGAGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATATGGGGTCCCAGTCGTCTCAAGTCATCCCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTTGCACAGGATCAGTGGCTTAACTGCACTCCTGATGGTTTTGTAAATCTGGGTGTCAGATCGTTTCTTGATCTGCGAAGTTGGTTCCGCACTAATGATATACCTTCATGCGAAGTGTGCAACGAGGCTGGAGTGAAGGCAGAGTTGTGCGATAATGAAGGTTGCACTGTCCGTGTACATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAATGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTAAATGGCGATCTACAGTAACCAATATGGAGTCCAAGGAAGAAGAGGATGAGCCAGATAGGCGCACTCAAGGCCAGTCATCATCACAGAGAAGGAAGAAATCTAGATTGAACATAGACATGGATTCAGATTCAAATGGAGCCAGTGCTTCCCAACCTCCTCCAGAGACAAGGAGAGTAACGCGAAGTTCTGCCCGCCAGAGG

Coding sequence (CDS)

ATGCGAGAGCTGAGTTGGAGACATCATACTCTCATTCAAGCGCTACTCGCACGCGGCCCACTAAGAGAGGATCAGTTTCATTTGATGTTTACGCGCATCACTGGAAAGAGCCCAGATAATGACCAGCAGCTGTTTAATAATTACCTCCTGGCGATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGATGGTCGTGTTTATTATGGCTTGGTCAATAACGTATCTGACGAGCAATCCAAACTGGGAACAAAATATTCAGTTCCACAGATTGCCTTCTACAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGAGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATATGGGGTCCCAGTCGTCTCAAGTCATCCCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCCGAGCTTGCACAGGATCAGTGGCTTAACTGCACTCCTGATGGTTTTGTAAATCTGGGTGTCAGATCGTTTCTTGATCTGCGAAGTTGGTTCCGCACTAATGATATACCTTCATGCGAAGTGTGCAACGAGGCTGGAGTGAAGGCAGAGTTGTGCGATAATGAAGGTTGCACTGTCCGTGTACATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAATGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTAAATGGCGATCTACAGTAACCAATATGGAGTCCAAGGAAGAAGAGGATGAGCCAGATAGGCGCACTCAAGGCCAGTCATCATCACAGAGAAGGAAGAAATCTAGATTGAACATAGACATGGATTCAGATTCAAATGGAGCCAGTGCTTCCCAACCTCCTCCAGAGACAAGGAGAGTAACGCGAAGTTCTGCCCGCCAGAGG

Protein sequence

MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQR

Homology

[Close]

BLAST of MS010281 vs. NCBI nr
Match: XP_022153728.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Momordica charantia])

HSP 1 Score: 620.2 bits (1598), Expect = 9.9e-174
Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300
           CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300

Query: 301 RVTRSSARQR 311
           RVTRSSARQR
Sbjct: 301 RVTRSSARQR 310

[Close]

BLAST of MS010281 vs. NCBI nr
Match: XP_022153729.1 (non-structural maintenance of chromosomes element 1 homolog isoform X3 [Momordica charantia])

HSP 1 Score: 620.2 bits (1598), Expect = 9.9e-174
Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300
           CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300

Query: 301 RVTRSSARQR 311
           RVTRSSARQR
Sbjct: 301 RVTRSSARQR 310

[Close]

BLAST of MS010281 vs. NCBI nr
Match: XP_022153726.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Momordica charantia] >XP_022153727.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Momordica charantia])

HSP 1 Score: 619.0 bits (1595), Expect = 2.2e-173
Identity = 308/309 (99.68%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300
           CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300

Query: 301 RVTRSSARQ 310
           RVTRSSARQ
Sbjct: 301 RVTRSSARQ 309

[Close]

BLAST of MS010281 vs. NCBI nr
Match: XP_022995422.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-154
Identity = 279/315 (88.57%), Postives = 290/315 (92.06%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKMLSNK SKRACP 
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP 300
           CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Sbjct: 241 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQP 300

Query: 301 PPETRRVTRSSARQR 311
           PP+TRR+TRSSA QR
Sbjct: 301 PPDTRRITRSSAHQR 314

[Close]

BLAST of MS010281 vs. NCBI nr
Match: XP_022995424.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 555.4 bits (1430), Expect = 3.0e-154
Identity = 279/315 (88.57%), Postives = 290/315 (92.06%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKMLSNK SKRACP 
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP 300
           CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Sbjct: 241 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQP 300

Query: 301 PPETRRVTRSSARQR 311
           PP+TRR+TRSSA QR
Sbjct: 301 PPDTRRITRSSAHQR 314

[Close]

BLAST of MS010281 vs. ExPASy Swiss-Prot
Match: Q6PAF4 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 48/210 (22.86%), Postives = 90/210 (42.86%), Query Frame = 0


Query: 71  DGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLEN 130
           DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G  ++I+ L+L  E 
Sbjct: 73  DGLTYYALVNRVENDITKMASDYAENELELFRKTMELIIL--SDNGFATSISILNLADEL 132

Query: 131 QLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWF 190
           Q   M  +                 E+ +    Q++WL    +G   L  R  ++L  + 
Sbjct: 133 QSKKMKKKE---------------VEQLLQSFVQEKWL-IGRNGEYTLHTRCIMELEHYI 192

Query: 191 RT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPGCGTKWRS 250
           R    D+   C VC +  ++++LC+N  C + +H  C  K    K +   CP C   W  
Sbjct: 193 RNTYQDVAKICNVCRKVAIQSQLCEN--CGIPLHLQCAGKYFHGK-ANPTCPNCNESWPH 252

Query: 251 TVTNMESKEEEDEPDRRTQGQSSSQRRKKS 278
            + ++     +     +T+      +R K+
Sbjct: 253 EIPDLNQVSSQGPSHSQTETVRGRNQRSKN 261

[Close]

BLAST of MS010281 vs. ExPASy Swiss-Prot
Match: Q6P881 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.7e-07
Identity = 51/230 (22.17%), Postives = 96/230 (41.74%), Query Frame = 0


Query: 46  NNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIV 105
           ++++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +
Sbjct: 48  DDFVGVLNKHLQPLFMKIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTM 107

Query: 106 EAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQD 165
           E I    S  G    I+ L+L  E Q   M  +                 E+ +    QD
Sbjct: 108 ELII--ISENGFAPPISILNLADELQSKKMKKKE---------------VEQLLQSFVQD 167

Query: 166 QWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQ 225
           +WL    +G   L  R  ++L  +      D+   C VC++  ++ +LC+N  C + +H 
Sbjct: 168 KWL-IGRNGEYTLHTRCIMELEHYILNTYQDVAKICNVCHKIAIQCQLCEN--CGIPLHL 227

Query: 226 YCLKKMLSNKMSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQ 273
            C   +    ++   CP C   W   + ++            +QG S SQ
Sbjct: 228 QC-AGIYFRGIANPLCPNCKESWPHEIPDLSQVS--------SQGPSHSQ 248

[Close]

BLAST of MS010281 vs. ExPASy TrEMBL
Match: A0A6J1DI86 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 4.8e-174
Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300
           CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300

Query: 301 RVTRSSARQR 311
           RVTRSSARQR
Sbjct: 301 RVTRSSARQR 310

[Close]

BLAST of MS010281 vs. ExPASy TrEMBL
Match: A0A6J1DJY3 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 620.2 bits (1598), Expect = 4.8e-174
Identity = 309/310 (99.68%), Postives = 309/310 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300
           CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300

Query: 301 RVTRSSARQR 311
           RVTRSSARQR
Sbjct: 301 RVTRSSARQR 310

[Close]

BLAST of MS010281 vs. ExPASy TrEMBL
Match: A0A6J1DLJ6 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.1e-173
Identity = 308/309 (99.68%), Postives = 308/309 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNK SKRACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300
           CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR 300

Query: 301 RVTRSSARQ 310
           RVTRSSARQ
Sbjct: 301 RVTRSSARQ 309

[Close]

BLAST of MS010281 vs. ExPASy TrEMBL
Match: A0A6J1JYV1 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 279/315 (88.57%), Postives = 290/315 (92.06%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKMLSNK SKRACP 
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP 300
           CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Sbjct: 241 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQP 300

Query: 301 PPETRRVTRSSARQR 311
           PP+TRR+TRSSA QR
Sbjct: 301 PPDTRRITRSSAHQR 314

[Close]

BLAST of MS010281 vs. ExPASy TrEMBL
Match: A0A6J1K5P2 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 279/315 (88.57%), Postives = 290/315 (92.06%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH+YCLKKMLSNK SKRACP 
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPS 240

Query: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP 300
           CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Sbjct: 241 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQP 300

Query: 301 PPETRRVTRSSARQR 311
           PP+TRR+TRSSA QR
Sbjct: 301 PPDTRRITRSSAHQR 314

[Close]

BLAST of MS010281 vs. TAIR 10
Match: AT5G21140.1 (embryo defective 1379 )

HSP 1 Score: 350.5 bits (898), Expect = 1.4e-96
Identity = 175/313 (55.91%), Postives = 229/313 (73.16%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60
           M  LSW+HHTLIQAL++RGPL+E +FH +FT +TG++P   +++F+ YLL INK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF+K I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
             AL+++LENQ+    S S Q +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+
Sbjct: 121 FDALNIRLENQISSEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGI 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKMSKRACPG 240
           RS LDLRSWFR ND+PSCEVCNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C G
Sbjct: 181 RSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRDDKR-CSG 240

Query: 241 CGTKW-RSTVTNMESKEE--EDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPP 300
           CG  W  S +T  E+ EE   DE +  TQ  +   +R++ + +   +  S  + AS    
Sbjct: 241 CGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRRQQRDSTENGSSQASLASTSGA 300

Query: 301 ETRRVTRSSARQR 311
            TRRVTRS    R
Sbjct: 301 NTRRVTRSVGHSR 312

The following BLAST results are available for this feature:

BLAST of MS010281 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153728.1	9.9e-174	99.68	non-structural maintenance of chromosomes element 1 homolog isoform X2 [Momordic...	[more]
XP_022153729.1	9.9e-174	99.68	non-structural maintenance of chromosomes element 1 homolog isoform X3 [Momordic...	[more]
XP_022153726.1	2.2e-173	99.68	non-structural maintenance of chromosomes element 1 homolog isoform X1 [Momordic...	[more]
XP_022995422.1	3.0e-154	88.57	non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbit...	[more]
XP_022995424.1	3.0e-154	88.57	non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbit...	[more]

BLAST of MS010281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PAF4	1.0e-08	22.86	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX...	[more]
Q6P881	5.7e-07	22.17	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali...	[more]

BLAST of MS010281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DI86	4.8e-174	99.68	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]
A0A6J1DJY3	4.8e-174	99.68	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]
A0A6J1DLJ6	1.1e-173	99.68	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]
A0A6J1JYV1	1.5e-154	88.57	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1K5P2	1.5e-154	88.57	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]

BLAST of MS010281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21140.1	1.4e-96	55.91	embryo defective 1379	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011513	Non-structural maintenance of chromosomes element 1	PFAM	PF07574	SMC_Nse1	coord: 8..186 e-value: 2.2E-43 score: 148.4
IPR011513	Non-structural maintenance of chromosomes element 1	PANTHER	PTHR20973	NON-SMC ELEMENT 1-RELATED	coord: 1..308
IPR014857	Zinc finger, RING-like	PFAM	PF08746	zf-RING-like	coord: 198..241 e-value: 2.9E-8 score: 33.9
IPR014857	Zinc finger, RING-like	CDD	cd16493	RING-CH-C4HC3_NSE1	coord: 197..243 e-value: 1.89362E-13 score: 61.6769
None	No IPR available	GENE3D	3.90.1150.220		coord: 5..81 e-value: 1.8E-13 score: 52.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..310
None	No IPR available	PANTHER	PTHR20973:SF1	BNAANNG27900D PROTEIN	coord: 1..308
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 197..256 e-value: 7.9E-11 score: 43.3
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 84..194 e-value: 2.6E-17 score: 64.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010281.1	MS010281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
cellular_component	GO:0030915	Smc5-Smc6 complex