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MS010264 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGGAAATCGAGAGCAGCGTCCGCAATTGCCTCTCGTAGGTGGGGGGCGACCGTCTTCCTCATCCTCCTTAGCACCTCCAACTTCATGGGCGTCCACAACTTCGGTTTCTGCTTCAGGCAAGAGAATTCAAAGAGAAATGGCTGAGTTTAATTCCGACCCACCTTCCCATTGCTCCGCTGGCCCAAAGGGTGACAATCTCTACCACTGGTTCGCTACCATCTTTGGCCCTCCTGGTAACTGCTACCCTTCTACTTCTTTCACTTTTAGAATTTTGATGATGCCGTTTCGGTTTTATCGCTGTTCATACGATTTCTGGTTTCCCCTCTTTTGGTCATGCTTTCCCGTTCTTCTTTTACTCGCTCGCTTCCGCCAAAGATTTCTGAATATTTGGCGTGTTTATGGACAAGGTTTTAACTTTTCTGCCAGATTTTTATGATTAAAGTGTCTTCAATTGGGCATGGCCGTTAGGATTTCACTTTCCTGCTTTGTTAGTAGCTTTACTTCTTTCGAGCAGTTATTTATCATCTTCGGCACTCTCTCATTTGTTACAATTCTGAACGGATGCTCGTTGAAACTCTGATGGGGTTTTATTACCTGATTGCTAAACATATTCTTTGCCCTTTGCTACCTATTACAATTCTGAAGAAAGTGATTAGGGTAGTTTCCAGGCATGTAAGTTATCAAACTGAGTAAATGGAGTCAGAGTTGGAGAGAAGCTAATTTTAGATCAAAGTTGTCGAACCCACAATCTTCCAGATGGAACTTGAGCAAGAAACTAAGTATGCCCCAAAGAAATACACAGTATGCTGCCATGGACTTCCTACCATGCTCGTGCTCAAACCTAATCCGCAACTATTTAACTAATATCTCTGAAAACAATACACAAAATGATCAGGGTAGAAGATGCTCACTGATGGAGTTCTATTACCCAATTGTTTGATGCTGAAGAACGAACCAGTCTATTGGACATTTGTTGCACAAAACTCAGAAGGATTTGGAAGAATGAACTCTAACTAAATAGTCACACTACACTAATATATACAAATTCTTGAATGGATGATTGCACAACCATTGGTGTCGAGGAATTTCAGCATGTAACTTGCTGAATGAAGGGAGAGTCGTGCGTTTCTGTTGGACACAATAAAGTATAATACTACCTTTCTCCTCTGCATTAAGTGAATTGTTTTTAGTGAAACCGAGTGTTTGATAAAATAAACTTCCTCATCAAAGTCTTACTGAAGAAATAGTCAGGCAAGAGAAATAAAAGTTAAGCCTATGTCCATCGTGTCTGATATTAGTTTATTAGACAAGAAACAATGCAATGAAGGGAACGGAAAATGATGCTCAAGTGATGTTTAATGGCATAGATTATTTGATAGGCAGGAAAAGCTTAGGTTAAAAAGTAAACGACTTCATAAATCTAGTACCAGCGAGCTCCTTCCTCTTCCTCTCTTTGTCTCAGGTTTCTTTTTCTCCTATAAGTAGTAGACATGAAAGTATAAGTCATTTGTCTATAGAGTTGTATTCACTTTGATTGTTTGATGACTGAGTATAAATACCATCTCCAATAGATGTGTTGGTGGCAGGTTTTTCATTTTGCATTCAAGGTTGTGTTTAGCTGTTCAATTTTACATAGCTCTTTCCGGCAGTAGTAACCTTGACTAATATCTTTGTCTTGTTTTTAGGAACACCATATGAAGGTGGTATATTTTTTCTTGACATACTTTTTCCATGTGATTATCCATTCTATCCTCCAAAGGTACTCTCACTTACATCCTTAAAATTTAGGATACAAAAGCTAAAATTTCTCTTGCCTTCATCACGAGCATGGGATGATCATTCTTGACCTAATGCACACGGTTCTGAGTTTTATATCGTTTGTTGATTTATTAAGAAGGATCAGATCTGCAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTGGATTCCGCTGGTAATGTAAGTTTGGACATTCTGAAGGAGAACTGGAGTCCAGCACTGACAATCGCAAAGGTGTTAATTGCAGTGAAGTCGATTTTTGAAAATCCAAACCCTTGTGAGTCGCCCTTCTTTTTCTAAGGATTGTGCTCTGTCGAAGATGCAGCTGTTACAAATGCTTACTTTGCCCACTTTTGCAGATGATCCAAACGCACCTGGCGTTGCTCACTTGTACTTAACCGATAGATGTAAGCACGACGAGATAGCTGCTGAGTGGACACTACGTTTTGCCAAG ATGGTGGGAAATCGAGAGCAGCGTCCGCAATTGCCTCTCGTAGGTGGGGGGCGACCGTCTTCCTCATCCTCCTTAGCACCTCCAACTTCATGGGCGTCCACAACTTCGGTTTCTGCTTCAGGCAAGAGAATTCAAAGAGAAATGGCTGAGTTTAATTCCGACCCACCTTCCCATTGCTCCGCTGGCCCAAAGGGTGACAATCTCTACCACTGGTTCGCTACCATCTTTGGCCCTCCTGGAACACCATATGAAGGTGGTATATTTTTTCTTGACATACTTTTTCCATGTGATTATCCATTCTATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTGGATTCCGCTGGTAATGTAAGTTTGGACATTCTGAAGGAGAACTGGAGTCCAGCACTGACAATCGCAAAGGTGTTAATTGCAGTGAAGTCGATTTTTGAAAATCCAAACCCTTATGATCCAAACGCACCTGGCGTTGCTCACTTGTACTTAACCGATAGATGTAAGCACGACGAGATAGCTGCTGAGTGGACACTACGTTTTGCCAAG ATGGTGGGAAATCGAGAGCAGCGTCCGCAATTGCCTCTCGTAGGTGGGGGGCGACCGTCTTCCTCATCCTCCTTAGCACCTCCAACTTCATGGGCGTCCACAACTTCGGTTTCTGCTTCAGGCAAGAGAATTCAAAGAGAAATGGCTGAGTTTAATTCCGACCCACCTTCCCATTGCTCCGCTGGCCCAAAGGGTGACAATCTCTACCACTGGTTCGCTACCATCTTTGGCCCTCCTGGAACACCATATGAAGGTGGTATATTTTTTCTTGACATACTTTTTCCATGTGATTATCCATTCTATCCTCCAAAGGTTGTATTTAAAACCCGAATCTACCACTGCAATGTGGATTCCGCTGGTAATGTAAGTTTGGACATTCTGAAGGAGAACTGGAGTCCAGCACTGACAATCGCAAAGGTGTTAATTGCAGTGAAGTCGATTTTTGAAAATCCAAACCCTTATGATCCAAACGCACCTGGCGTTGCTCACTTGTACTTAACCGATAGATGTAAGCACGACGAGATAGCTGCTGAGTGGACACTACGTTTTGCCAAG MVGNREQRPQLPLVGGGRPSSSSSLAPPTSWASTTSVSASGKRIQREMAEFNSDPPSHCSAGPKGDNLYHWFATIFGPPGTPYEGGIFFLDILFPCDYPFYPPKVVFKTRIYHCNVDSAGNVSLDILKENWSPALTIAKVLIAVKSIFENPNPYDPNAPGVAHLYLTDRCKHDEIAAEWTLRFAK Homology
BLAST of MS010264 vs. NCBI nr
Match: XP_022153725.1 (constitutive photomorphogenesis protein 10 [Momordica charantia]) HSP 1 Score: 387.9 bits (995), Expect = 5.0e-104 Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of MS010264 vs. NCBI nr
Match: XP_038902201.1 (constitutive photomorphogenesis protein 10 isoform X2 [Benincasa hispida]) HSP 1 Score: 356.7 bits (914), Expect = 1.2e-94 Identity = 169/185 (91.35%), Postives = 173/185 (93.51%), Query Frame = 0
BLAST of MS010264 vs. NCBI nr
Match: XP_038902200.1 (constitutive photomorphogenesis protein 10 isoform X1 [Benincasa hispida]) HSP 1 Score: 354.8 bits (909), Expect = 4.6e-94 Identity = 168/184 (91.30%), Postives = 172/184 (93.48%), Query Frame = 0
BLAST of MS010264 vs. NCBI nr
Match: XP_022943567.1 (constitutive photomorphogenesis protein 10 [Cucurbita moschata] >XP_022986179.1 constitutive photomorphogenesis protein 10 [Cucurbita maxima] >XP_023512726.1 constitutive photomorphogenesis protein 10 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7010225.1 Constitutive photomorphogenesis protein 10 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93 Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0
BLAST of MS010264 vs. NCBI nr
Match: KAG6570333.1 (Constitutive photomorphogenesis protein 10, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93 Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0
BLAST of MS010264 vs. ExPASy Swiss-Prot
Match: Q9LJD7 (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana OX=3702 GN=COP10 PE=1 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 5.9e-68 Identity = 118/157 (75.16%), Postives = 134/157 (85.35%), Query Frame = 0
BLAST of MS010264 vs. ExPASy Swiss-Prot
Match: Q2T9X7 (Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus OX=9913 GN=UBE2E3 PE=2 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 9.2e-53 Identity = 92/152 (60.53%), Postives = 117/152 (76.97%), Query Frame = 0
BLAST of MS010264 vs. ExPASy Swiss-Prot
Match: Q969T4 (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens OX=9606 GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 9.2e-53 Identity = 92/152 (60.53%), Postives = 117/152 (76.97%), Query Frame = 0
BLAST of MS010264 vs. ExPASy Swiss-Prot
Match: P52483 (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus OX=10090 GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 208.0 bits (528), Expect = 9.2e-53 Identity = 92/152 (60.53%), Postives = 117/152 (76.97%), Query Frame = 0
BLAST of MS010264 vs. ExPASy Swiss-Prot
Match: Q96LR5 (Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens OX=9606 GN=UBE2E2 PE=1 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.3e-51 Identity = 89/152 (58.55%), Postives = 116/152 (76.32%), Query Frame = 0
BLAST of MS010264 vs. ExPASy TrEMBL
Match: A0A6J1DHM4 (constitutive photomorphogenesis protein 10 OS=Momordica charantia OX=3673 GN=LOC111021177 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.4e-104 Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0
BLAST of MS010264 vs. ExPASy TrEMBL
Match: A0A6J1JFC7 (constitutive photomorphogenesis protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111483999 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 8.5e-94 Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0
BLAST of MS010264 vs. ExPASy TrEMBL
Match: A0A6J1FTD1 (constitutive photomorphogenesis protein 10 OS=Cucurbita moschata OX=3662 GN=LOC111448300 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 8.5e-94 Identity = 167/185 (90.27%), Postives = 173/185 (93.51%), Query Frame = 0
BLAST of MS010264 vs. ExPASy TrEMBL
Match: A0A5D3DDP3 (Constitutive photomorphogenesis protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00610 PE=4 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92 Identity = 167/185 (90.27%), Postives = 171/185 (92.43%), Query Frame = 0
BLAST of MS010264 vs. ExPASy TrEMBL
Match: A0A1S3BMW7 (constitutive photomorphogenesis protein 10 OS=Cucumis melo OX=3656 GN=LOC103491591 PE=4 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92 Identity = 167/185 (90.27%), Postives = 171/185 (92.43%), Query Frame = 0
BLAST of MS010264 vs. TAIR 10
Match: AT3G13550.1 (Ubiquitin-conjugating enzyme family protein ) HSP 1 Score: 258.5 bits (659), Expect = 4.2e-69 Identity = 118/157 (75.16%), Postives = 134/157 (85.35%), Query Frame = 0
BLAST of MS010264 vs. TAIR 10
Match: AT3G13550.2 (Ubiquitin-conjugating enzyme family protein ) HSP 1 Score: 209.5 bits (532), Expect = 2.2e-54 Identity = 95/125 (76.00%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of MS010264 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 187.6 bits (475), Expect = 9.1e-48 Identity = 79/145 (54.48%), Postives = 109/145 (75.17%), Query Frame = 0
BLAST of MS010264 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 ) HSP 1 Score: 187.6 bits (475), Expect = 9.1e-48 Identity = 79/145 (54.48%), Postives = 109/145 (75.17%), Query Frame = 0
BLAST of MS010264 vs. TAIR 10
Match: AT2G16740.1 (ubiquitin-conjugating enzyme 29 ) HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46 Identity = 76/143 (53.15%), Postives = 109/143 (76.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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