MS010221 (gene) Bitter gourd (TR) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGAGGAAGAGGAAAGGGGAAGAAATTCAGTGTAACCAGTCTTGAAGACCCAACAACTGGTGAGGAAGAGAAATTGTCTTCACAGAAGCAAAGTGGAAGTGCAGAACAGCCATTAAAAGATGAAATCAAGGAAGAAAATTTTGGAAAAGTAGAAGCCATCAATGAGCATGCTAAAGCTTCACCTGGCAAGGTGATTGAAGGTCCAACTCCACTGGAGTGTGGGAAGAAGAGGAAAAGAAACTCTTCAATCAAAGAGAAACTGGATTTAGTTAAAGATGAAAATTGTGATGGCACCCAAACAAGCATTGTCGAAGTCAAGTCTAATGGATTCCGGCATAATGGAAGCAGGCGAAAAAGTAAGCCCCGTCGAGCTGCTGAAGCAGTTGTTGAGTGCAGAATGGGTAGAGGAAGAGGAAAGGGGAAGAAATTCAGTGTAACCAGTCTTGAAGACCCAACAACTGGTGAGGAAGAGAAATTGTCTTCACAGAAGCAAAGTGGAAGTGCAGAACAGCCATTAAAAGATGAAATCAAGGAAGAAAATTTTGGAAAAGTAGAAGCCATCAATGAGCATGCTAAAGCTTCACCTGGCAAGGTGATTGAAGGTCCAACTCCACTGGAGTGTGGGAAGAAGAGGAAAAGAAACTCTTCAATCAAAGAGAAACTGGATTTAGTTAAAGATGAAAATTGTGATGGCACCCAAACAAGCATTGTCGAAGTCAAGTCTAATGGATTCCGGCATAATGGAAGCAGGCGAAAAAGTAAGCCCCGTCGAGCTGCTGAAGCAGTTGTTGAGTGCAGA ATGGGTAGAGGAAGAGGAAAGGGGAAGAAATTCAGTGTAACCAGTCTTGAAGACCCAACAACTGGTGAGGAAGAGAAATTGTCTTCACAGAAGCAAAGTGGAAGTGCAGAACAGCCATTAAAAGATGAAATCAAGGAAGAAAATTTTGGAAAAGTAGAAGCCATCAATGAGCATGCTAAAGCTTCACCTGGCAAGGTGATTGAAGGTCCAACTCCACTGGAGTGTGGGAAGAAGAGGAAAAGAAACTCTTCAATCAAAGAGAAACTGGATTTAGTTAAAGATGAAAATTGTGATGGCACCCAAACAAGCATTGTCGAAGTCAAGTCTAATGGATTCCGGCATAATGGAAGCAGGCGAAAAAGTAAGCCCCGTCGAGCTGCTGAAGCAGTTGTTGAGTGCAGA MGRGRGKGKKFSVTSLEDPTTGEEEKLSSQKQSGSAEQPLKDEIKEENFGKVEAINEHAKASPGKVIEGPTPLECGKKRKRNSSIKEKLDLVKDENCDGTQTSIVEVKSNGFRHNGSRRKSKPRRAAEAVVECR Homology
BLAST of MS010221 vs. NCBI nr
Match: XP_022148746.1 (uncharacterized protein LOC111017338 [Momordica charantia]) HSP 1 Score: 255.8 bits (652), Expect = 2.1e-64 Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of MS010221 vs. NCBI nr
Match: XP_022995170.1 (uncharacterized protein LOC111490789 [Cucurbita maxima] >XP_022995171.1 uncharacterized protein LOC111490789 [Cucurbita maxima]) HSP 1 Score: 200.3 bits (508), Expect = 1.1e-47 Identity = 103/134 (76.87%), Postives = 117/134 (87.31%), Query Frame = 0
BLAST of MS010221 vs. NCBI nr
Match: KAG7035836.1 (hypothetical protein SDJN02_02635, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 197.2 bits (500), Expect = 9.0e-47 Identity = 104/134 (77.61%), Postives = 114/134 (85.07%), Query Frame = 0
BLAST of MS010221 vs. NCBI nr
Match: XP_022958162.1 (uncharacterized protein LOC111459471 [Cucurbita moschata] >KAG6605893.1 hypothetical protein SDJN03_03210, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197.2 bits (500), Expect = 9.0e-47 Identity = 104/134 (77.61%), Postives = 114/134 (85.07%), Query Frame = 0
BLAST of MS010221 vs. NCBI nr
Match: XP_023532419.1 (uncharacterized protein LOC111794599 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195.3 bits (495), Expect = 3.4e-46 Identity = 103/134 (76.87%), Postives = 113/134 (84.33%), Query Frame = 0
BLAST of MS010221 vs. ExPASy TrEMBL
Match: A0A6J1D6B7 (uncharacterized protein LOC111017338 OS=Momordica charantia OX=3673 GN=LOC111017338 PE=4 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 1.0e-64 Identity = 133/134 (99.25%), Postives = 133/134 (99.25%), Query Frame = 0
BLAST of MS010221 vs. ExPASy TrEMBL
Match: A0A6J1K191 (uncharacterized protein LOC111490789 OS=Cucurbita maxima OX=3661 GN=LOC111490789 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 5.1e-48 Identity = 103/134 (76.87%), Postives = 117/134 (87.31%), Query Frame = 0
BLAST of MS010221 vs. ExPASy TrEMBL
Match: A0A6J1H145 (uncharacterized protein LOC111459471 OS=Cucurbita moschata OX=3662 GN=LOC111459471 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.3e-47 Identity = 104/134 (77.61%), Postives = 114/134 (85.07%), Query Frame = 0
BLAST of MS010221 vs. ExPASy TrEMBL
Match: A0A6A1W7A1 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G024357 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 1.3e-30 Identity = 82/137 (59.85%), Postives = 105/137 (76.64%), Query Frame = 0
BLAST of MS010221 vs. ExPASy TrEMBL
Match: A0A7N2QX30 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.2e-30 Identity = 83/137 (60.58%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of MS010221 vs. TAIR 10
Match: AT3G57930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 60/139 (43.17%), Postives = 84/139 (60.43%), Query Frame = 0
BLAST of MS010221 vs. TAIR 10
Match: AT3G57930.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-17 Identity = 60/139 (43.17%), Postives = 84/139 (60.43%), Query Frame = 0
BLAST of MS010221 vs. TAIR 10
Match: AT2G42190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57930.2); Has 1381 Blast hits to 1230 proteins in 175 species: Archae - 3; Bacteria - 25; Metazoa - 672; Fungi - 135; Plants - 127; Viruses - 30; Other Eukaryotes - 389 (source: NCBI BLink). ) HSP 1 Score: 85.1 bits (209), Expect = 4.6e-17 Identity = 57/138 (41.30%), Postives = 83/138 (60.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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