Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTGGGGGAGACTTGTAAACGTAAGGAGGAGGTGGTGATGGAGATGGTGGTGGAGGAGACTTGTAGACGTAAGGAGGTGGTGGTGACGGAGATGGTGGAGGAGGTGACTTGTAGATGTATGGAGGAGGCGGTGAGGGAGATGGTGGAGGTGGAGACTTATAGATGTATGGAGGAGGTGGTGAGGGAGATGGTGGTGGAGGGGACTTGTAGACGTAGGGCGGCGGTGGTGATGGAGATGGAGGAGGGGGTGACTTGTAGATGTGGGGAGGTGGTGGTGAGGGAGATGGTGGTGGGGGAGACTTATAGACATAAGGAGGAGGTGGTGATGGAGATGGTGGTGGAGGAGACTTGTAGACATAAGGAGGTGGTGGTGACGGAGATGGTGGAGGAGGTGACTTGTAGATGTATGGAGGAGGCGGTGAGGGAGATGGTGGTGGAGGGGATTTGTAGATGTAGGGCGGCGGTGGTGATGGAGAGGGAGGAGGGGGTGACTTGTAGATGTAGGGAGGTGGTGGTGAGGGAGATGGTGGTGGGGGCGACTTGTAGACATAGGGAGGTGGCGGTGAGGGAGATGGTGGTGGAGGAGACTTATAAACATAAGGAGGTGGCGGTGATGGAGATGGTGGTGGGGGAGAGTTATAGATGTAAGGAGGAGGCGGTGATGGAGATGGTGGTGGTGGAGACTTGTACACATATGGAGGCGGTGGAGATGGAGATGGTGGAGGTGGAGACTTGTACACATATGGAGGGGGTGGTGATGGAGATGGTGGAGGTGGAGACTTGTAGACATATGGAGGTGGTGGAGGTGACTTATAGATGTAAGGAGGTGGTGGCGATGGAGACGGTGGAGGAGGAGACTTGTAGACATAAGGAGGGGGTGGCGATGGAGATGGCGGTGGAGGAGACTTATAGACATAAGGAGGTGGTGGTGAGGGAGATGGTGGCGGTGGAGACTTGTAGACGTATGGAGGCGGTGGAGATGGAGACGGTGGAGGTGGAGACTTATAGACGTATGGAGGTGGTGGTGATGGAGATGGAGGAGGTGGAGACTTGTAGACGTAGGGAGGTGGTGGGGAGGGAGATGGTGGCGGAGGAGACTTGTAGACATAGGGAGGTGGCGGTGATGGAGATGGTGGAGGAGGAGATTTGTAGACGTAGGGGGGCGGTGGAGGAGATTTATAAACATAAGGAGGTGGTGGTGGGGGAGACTTATAAATGTAAGGAGGTGGCGGAGATTTATAATAGTATGGAGGTGGTGGTGAAGGAGAAGGGGGAGGCGGAGACTTGTAAACATACGGAGGTGGTGACTTGTGGTGGTGATATTTTGGTGATGGTG
mRNA sequence
ATGGTGGTGGGGGAGACTTGTAAACGTAAGGAGGAGGTGGTGATGGAGATGGTGGTGGAGGAGACTTGTAGACGTAAGGAGGTGGTGGTGACGGAGATGGTGGAGGAGGTGACTTGTAGATGTATGGAGGAGGCGGTGAGGGAGATGGTGGAGGTGGAGACTTATAGATGTATGGAGGAGGTGGTGAGGGAGATGGTGGTGGAGGGGACTTGTAGACGTAGGGCGGCGGTGGTGATGGAGATGGAGGAGGGGGTGACTTGTAGATGTGGGGAGGTGGTGGTGAGGGAGATGGTGGTGGGGGAGACTTATAGACATAAGGAGGAGGTGGTGATGGAGATGGTGGTGGAGGAGACTTGTAGACATAAGGAGGTGGTGGTGACGGAGATGGTGGAGGAGGTGACTTGTAGATGTATGGAGGAGGCGGTGAGGGAGATGGTGGTGGAGGGGATTTGTAGATGTAGGGCGGCGGTGGTGATGGAGAGGGAGGAGGGGGTGACTTGTAGATGTAGGGAGGTGGTGGTGAGGGAGATGGTGGTGGGGGCGACTTGTAGACATAGGGAGGTGGCGGTGAGGGAGATGGTGGTGGAGGAGACTTATAAACATAAGGAGGTGGCGGTGATGGAGATGGTGGTGGGGGAGAGTTATAGATGTAAGGAGGAGGCGGTGATGGAGATGGTGGTGGTGGAGACTTGTACACATATGGAGGCGGTGGAGATGGAGATGGTGGAGGTGGAGACTTGTACACATATGGAGGGGGTGGTGATGGAGATGGTGGAGGTGGAGACTTGTAGACATATGGAGGTGGTGGAGGTGACTTATAGATGTAAGGAGGTGGTGGCGATGGAGACGGTGGAGGAGGAGACTTGTAGACATAAGGAGGGGGTGGCGATGGAGATGGCGGTGGAGGAGACTTATAGACATAAGGAGGTGGTGGTGAGGGAGATGGTGGCGGTGGAGACTTGTAGACGTATGGAGGCGGTGGAGATGGAGACGGTGGAGGTGGAGACTTATAGACGTATGGAGGTGGTGGTGATGGAGATGGAGGAGGTGGAGACTTGTAGACGTAGGGAGGTGGTGGGGAGGGAGATGGTGGCGGAGGAGACTTGTAGACATAGGGAGGTGGCGGTGATGGAGATGGTGGAGGAGGAGATTTGTAGACGTAGGGGGGCGGTGGAGGAGATTTATAAACATAAGGAGGTGGTGGTGGGGGAGACTTATAAATGTAAGGAGGTGGCGGAGATTTATAATAGTATGGAGGTGGTGGTGAAGGAGAAGGGGGAGGCGGAGACTTGTAAACATACGGAGGTGGTGACTTGTGGTGGTGATATTTTGGTGATGGTG
Coding sequence (CDS)
ATGGTGGTGGGGGAGACTTGTAAACGTAAGGAGGAGGTGGTGATGGAGATGGTGGTGGAGGAGACTTGTAGACGTAAGGAGGTGGTGGTGACGGAGATGGTGGAGGAGGTGACTTGTAGATGTATGGAGGAGGCGGTGAGGGAGATGGTGGAGGTGGAGACTTATAGATGTATGGAGGAGGTGGTGAGGGAGATGGTGGTGGAGGGGACTTGTAGACGTAGGGCGGCGGTGGTGATGGAGATGGAGGAGGGGGTGACTTGTAGATGTGGGGAGGTGGTGGTGAGGGAGATGGTGGTGGGGGAGACTTATAGACATAAGGAGGAGGTGGTGATGGAGATGGTGGTGGAGGAGACTTGTAGACATAAGGAGGTGGTGGTGACGGAGATGGTGGAGGAGGTGACTTGTAGATGTATGGAGGAGGCGGTGAGGGAGATGGTGGTGGAGGGGATTTGTAGATGTAGGGCGGCGGTGGTGATGGAGAGGGAGGAGGGGGTGACTTGTAGATGTAGGGAGGTGGTGGTGAGGGAGATGGTGGTGGGGGCGACTTGTAGACATAGGGAGGTGGCGGTGAGGGAGATGGTGGTGGAGGAGACTTATAAACATAAGGAGGTGGCGGTGATGGAGATGGTGGTGGGGGAGAGTTATAGATGTAAGGAGGAGGCGGTGATGGAGATGGTGGTGGTGGAGACTTGTACACATATGGAGGCGGTGGAGATGGAGATGGTGGAGGTGGAGACTTGTACACATATGGAGGGGGTGGTGATGGAGATGGTGGAGGTGGAGACTTGTAGACATATGGAGGTGGTGGAGGTGACTTATAGATGTAAGGAGGTGGTGGCGATGGAGACGGTGGAGGAGGAGACTTGTAGACATAAGGAGGGGGTGGCGATGGAGATGGCGGTGGAGGAGACTTATAGACATAAGGAGGTGGTGGTGAGGGAGATGGTGGCGGTGGAGACTTGTAGACGTATGGAGGCGGTGGAGATGGAGACGGTGGAGGTGGAGACTTATAGACGTATGGAGGTGGTGGTGATGGAGATGGAGGAGGTGGAGACTTGTAGACGTAGGGAGGTGGTGGGGAGGGAGATGGTGGCGGAGGAGACTTGTAGACATAGGGAGGTGGCGGTGATGGAGATGGTGGAGGAGGAGATTTGTAGACGTAGGGGGGCGGTGGAGGAGATTTATAAACATAAGGAGGTGGTGGTGGGGGAGACTTATAAATGTAAGGAGGTGGCGGAGATTTATAATAGTATGGAGGTGGTGGTGAAGGAGAAGGGGGAGGCGGAGACTTGTAAACATACGGAGGTGGTGACTTGTGGTGGTGATATTTTGGTGATGGTG
Protein sequence
MVVGETCKRKEEVVMEMVVEETCRRKEVVVTEMVEEVTCRCMEEAVREMVEVETYRCMEEVVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVMEMVVEETCRHKEVVVTEMVEEVTCRCMEEAVREMVVEGICRCRAAVVMEREEGVTCRCREVVVREMVVGATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRCKEEAVMEMVVVETCTHMEAVEMEMVEVETCTHMEGVVMEMVEVETCRHMEVVEVTYRCKEVVAMETVEEETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVEMETVEVETYRRMEVVVMEMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEEEICRRRGAVEEIYKHKEVVVGETYKCKEVAEIYNSMEVVVKEKGEAETCKHTEVVTCGGDILVMV
Homology
BLAST of MS010204 vs. NCBI nr
Match:
KAG4167772.1 (hypothetical protein ERO13_A13G216401v2 [Gossypium hirsutum])
HSP 1 Score: 282.0 bits (720), Expect = 9.2e-72
Identity = 243/492 (49.39%), Postives = 266/492 (54.07%), Query Frame = 0
Query: 1 MVVGETCKRKEEVVMEMVVEETCRRKEVVVTEMVEEVTCRCMEEAVRE------------ 60
MV ETC+ EVVMEMV TCR KE V EMVE VTCRC EE VRE
Sbjct: 35 MVEVETCRHVVEVVMEMVEVGTCRCKEEEVREMVEVVTCRCKEEVVREMVEAVTCRYKVD 94
Query: 61 ----MVEVETYRCMEEVVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMV------ 120
MVEV T R EVVREM GTC R V EMEE TCR VREMV
Sbjct: 95 EVKKMVEVGTCRHRVEVVREMAEVGTCIHRVEAVREMEEVGTCRHMFGEVREMVEVGTCR 154
Query: 121 --VGE--------TYRHKEEVVMEMVVEETCRHKEVVVTEMVEEVTCRCMEEAVREMVVE 180
VGE T RHKEEVVMEMV TCRHKE V EM EVTCRC EE VREMV
Sbjct: 155 RRVGEVRETVEVGTCRHKEEVVMEMVEVGTCRHKEEEVREMGVEVTCRCREEVVREMVEV 214
Query: 181 GICR--------------CR--AAVVMEREEGVTCRCREVVVREMVVGATCRHREVAVRE 240
G CR CR VV E VTCRC+E VVRE+V TCRH+ V VRE
Sbjct: 215 GTCRHKVGEVRKTVEVGTCRHKEEVVTEMVVEVTCRCKEEVVREVVEVGTCRHKVVEVRE 274
Query: 241 MVVEETYKHKEVAVMEMVVGESYRCKEEAVMEMVVVE--TCTHMEAVEMEMVEVETCTHM 300
V ETY+HKE V EMV + R + V E V VE TC H E V MEMVEVETC H
Sbjct: 275 TVKVETYRHKEEMVTEMVEVGTCRRRVGEVRETVEVEVGTCRHKEEVVMEMVEVETCRHK 334
Query: 301 EGVVMEMVEVETCRHMEVVEVTYRCKEVVAMETVEEETCRHKEGVAMEMAVEETYRHKEV 360
G V EM EV TCRHM V T +CKEVV E VE E C+ KEG M ETYRH
Sbjct: 335 MGEVKEMEEVGTCRHMVVEVETCKCKEVVVREMVEVEICKCKEGEVRVMVEVETYRHMVE 394
Query: 361 VVREMVAVETCRRMEAVEMETVEVETYRRMEVVVMEMEEVETCRRREVVGREMVAEETCR 420
+EMV VETCR M E V VET + M V +M +VETC+ +EMV ET +
Sbjct: 395 EAKEMVEVETCRNMIEGVNEMVGVETCKHMVEEVKKMVDVETCKHMVEETKEMVVVETYK 454
Query: 421 HREVAVMEMVEEEICRRRGAVEEIYKHKEV-----VVGETYKCKEVAEIYNSMEVVVKEK 438
+E V EMVE CR RG E + + EV +VGE K EV EI E V+E
Sbjct: 455 CKEEVVREMVEVGTCRCRG--EVVKEMVEVGTCRHMVGEVKKMVEV-EICICKEEEVREM 514
BLAST of MS010204 vs. NCBI nr
Match:
KAA3485897.1 (putative neurofilament heavy protein [Gossypium australe])
HSP 1 Score: 275.4 bits (703), Expect = 8.7e-70
Identity = 231/484 (47.73%), Postives = 266/484 (54.96%), Query Frame = 0
Query: 1 MVVGETCKRKEEVVMEMVVEETCRR-------KEVVVTEMVEEVTCRCMEEAVREMVEVE 60
MV TC+ EVV EMV ETCR KE V EMVE +TCRC E V+EMVEVE
Sbjct: 48 MVEVGTCRHMVEVVREMVEVETCRHMVGTCRCKEEEVREMVEVMTCRCKVEEVKEMVEVE 107
Query: 61 TYRCMEEVVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVMEM 120
YRC EE V+EMV GTCR + V EMEE TCR V V EMV ETY+H E V EM
Sbjct: 108 IYRCKEEEVKEMVEVGTCRHKVGEVKEMEEVGTCRHMVVEVNEMVEVETYKHMVEEVKEM 167
Query: 121 VVEETCRHKEVVVTEMVEEVTC----------------RCMEEAVREMVVEGICRCRAAV 180
V ETC+H V EMVE TC +C EE VREM G CRC+ V
Sbjct: 168 VEVETCKHMVEEVKEMVEVETCKHMVEEVKEMVVVETYKCKEEVVREMGKVGTCRCKGEV 227
Query: 181 VMEREEGVTCRCREVVVREMVVGATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRC 240
V E E C+C+E VREMV ATCR RE VR+MV T +HK V EMV + R
Sbjct: 228 VKEMVEVEICKCKEEEVREMVEEATCRCREEVVRKMVEVGTCRHKVGEVREMVEVGTCRH 287
Query: 241 KEEAVMEMVVVETCTHMEAVEMEMVEVETCTHMEGVVMEMVEVETCRHM-----EVVEV- 300
+ V E V V TC H E V EMVEV TC H V EM EV TCRHM E+VEV
Sbjct: 288 RVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMVVEVNEMVEVE 347
Query: 301 TYRCKEVVAMETVEEETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVE--- 360
T RCKEVV E ++ C+ KEG M ETY+H V+EMV VETC+ M VE
Sbjct: 348 TCRCKEVVVREMMDVGICKCKEGEVKVMVEVETYKHMVEEVKEMVEVETCKHMVEVETCK 407
Query: 361 ------METVEVETYRRMEVVVMEMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEE 420
E V VETY+ E VV EM EV TCR + V +EMV E C+ +E V EMVEE
Sbjct: 408 HIVEEVKEMVVVETYKCKEEVVREMGEVGTCRCKGEVVKEMVVVEICKCKEGEVREMVEE 467
Query: 421 EICRRRGAVEEIYKHKEVVVGETYKCK-EVAEIYNSMEV--------VVKEKGEAETCKH 438
CR R EE+ + K V VG C+ +V E+ +EV V+E E TC+H
Sbjct: 468 ATCRCR---EEVVR-KMVEVG---TCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRH 524
BLAST of MS010204 vs. NCBI nr
Match:
KAE8653504.1 (hypothetical protein Csa_007345 [Cucumis sativus])
HSP 1 Score: 268.5 bits (685), Expect = 1.1e-67
Identity = 224/465 (48.17%), Postives = 247/465 (53.12%), Query Frame = 0
Query: 1 MVVGETCKRKEEVVMEMVVEETCRRKEVVVTEMVEEVTCRCMEEAVREMVEVETYRCMEE 60
M V E CK + EVVMEMV EET + KEVV +MV EV C+ MEE +MV ETYR E
Sbjct: 53 MEVEEICKHRGEVVMEMVEEETYKHKEVVEMKMVAEVICKRMEEVEMKMVVGETYRHKEV 112
Query: 61 VVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVMEMVVEETCR 120
V MVV C+ VMEM EG R EVV M V E Y+H EEV E V ET
Sbjct: 113 VEMGMVVGVICKYMEEAVMEMVEGEIYRYKEVVGMVMAVEEIYKHMEEVEKEKVEGETYN 172
Query: 121 HKEVVVTEMVEEVTCRCMEEAVREMVVEGICRCRAAVVMEREEGVT-------------- 180
+ V EM EE C+ EE V E V GI RC+ V ME EG T
Sbjct: 173 NMVEEVKEMEEEEICKHTEEVVMEKVGVGIYRCKEVVGMEMVEGETYRHKEVVEMVMVEE 232
Query: 181 --CRCREVVVREMVVGATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRCKEEAVME 240
C+C EVV +E V T +H EV + M VEE KH EV MEMVV E+YR E
Sbjct: 233 EICKCMEVVEKETVEEETYKHMEVEEKVMAVEEICKHMEVVEMEMVVEETYRHMEVVEKV 292
Query: 241 MVVVETCTHMEAVEMEMVEVETCTHMEGVVMEMVEVETCRHMEVVEVTY------RCKEV 300
MVV E C ME VEMEMVE E C ME V MEMVEVET +HMEVVE+ +C V
Sbjct: 293 MVVEEICKRMEVVEMEMVEEEICKRMEVVEMEMVEVETYKHMEVVEMVMVEEEICKCMVV 352
Query: 301 VAMETVEEETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVEMETVEVETYR 360
V ME V C+H E V MEM ETYRHKEVV MV E C+ ME VE ETVE ETY+
Sbjct: 353 VEMEMVVVVICKHMEVVGMEMVEGETYRHKEVVEMVMVGEEICKCMEVVEKETVEEETYK 412
Query: 361 RMEVVVMEMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEEEICRRRGAV------E 420
MEV M E C+ EVV MV EET R EV MV IC+ V E
Sbjct: 413 HMEVEEKVMAVEEICKHMEVVEMGMVVEETYRRMEVVEKVMVGVVICKHMEEVEMETVGE 472
Query: 421 EIYKHKEVVVGETYKCKEVAEIYNSMEVVVKEKGEAETCKHTEVV 438
E H EVV EV EIY EVV E E CKH EVV
Sbjct: 473 ETCIHTEVV----EMVMEVEEIYRYTEVVETVMVEEEICKHMEVV 513
BLAST of MS010204 vs. NCBI nr
Match:
KAA3485896.1 (putative neurofilament heavy protein [Gossypium australe])
HSP 1 Score: 261.5 bits (667), Expect = 1.3e-65
Identity = 233/475 (49.05%), Postives = 258/475 (54.32%), Query Frame = 0
Query: 5 ETCKRKEEVVMEMVVEETCRRKEVVVTEMVEEVTCRCMEEAVREMVEVETYRCMEEVVRE 64
ET K KEE VMEMV TCR VV EMVE TCR M E VREMVEVET R M E +RE
Sbjct: 7 ETSKCKEEEVMEMVEVGTCRHMVEVVREMVEVETCRHMVEVVREMVEVETCRYMVEAMRE 66
Query: 65 MV--------VE-GTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVMEMVV 124
MV VE GTCR + V EM E +TCRC V+EMV E YR KEE V EMV
Sbjct: 67 MVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCRCKVEEVKEMVEVEIYRCKEEEVKEMVE 126
Query: 125 EETCRHKEVVVTEMVEEVTCRCMEEAVREMVVEGICRCRAAVVMEREEGVTCRCREVVVR 184
TCRHK V E VE TCR VRE V G CR R V E+ E TCR +E VV
Sbjct: 127 VGTCRHKVGEVRETVEVGTCRHRVGEVREKVEVGTCRHRVGEVREKVEVETCRHKEEVVT 186
Query: 185 EMV--------VG--------ATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRCKE 244
+MV VG TCRH V V EMV ET + KEV V EMV RCKE
Sbjct: 187 KMVEVGTCRHKVGEVKEMEEVGTCRHMVVEVNEMVEVETCRCKEVVVREMVEVGICRCKE 246
Query: 245 EAVMEMVVVETCTHMEAVEMEMVEVETCTHMEGVVMEMVEVETCRH-----MEVVEV-TY 304
V MV VET HM EMVEVETC HM V EMVEV TCRH E+VEV T
Sbjct: 247 GEVRVMVEVETYKHMVEEVKEMVEVETCKHMVEEVKEMVEVGTCRHKVGEVREMVEVGTC 306
Query: 305 RCKEVVAMETVEEETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVEMETVE 364
R + ETVE TCRHKE V EM T RHK V+EM V TCR M E VE
Sbjct: 307 RHRVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMVVEVNEMVE 366
Query: 365 VETYRRMEVVVMEMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEEEICRRRGAVEE 424
VET R EVVV EM +V C+ +E + MV ET +H V EMVE E C+ VE
Sbjct: 367 VETCRCKEVVVREMMDVGICKCKEGEVKVMVEVETYKHMVEEVKEMVEVETCKHMVEVET 426
Query: 425 ----IYKHKEVVVGETYKCKEVAEIYNSMEVVVKEKGEAETCKHTEVVTCGGDIL 445
+ + KE+VV ETYKCK E VV+E GE TC+ C G+++
Sbjct: 427 CKHIVEEVKEMVVVETYKCK---------EEVVREMGEVGTCR------CKGEVV 466
BLAST of MS010204 vs. NCBI nr
Match:
KAA3485893.1 (putative neurofilament heavy protein [Gossypium australe])
HSP 1 Score: 260.4 bits (664), Expect = 2.9e-65
Identity = 230/467 (49.25%), Postives = 250/467 (53.53%), Query Frame = 0
Query: 1 MVVGETCKRKEEVVMEMV--------VE-ETCRRKEVVVTEMVEEVTCRCMEEAVREMVE 60
MV ETC+ E + EMV VE TCR KE V EMVE +TCRC E V+EMVE
Sbjct: 51 MVEVETCRYMVEAMREMVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCRCKVEEVKEMVE 110
Query: 61 VETYRCMEEVVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVM 120
VE YRC EE V+EMV GTCR + V E E TCR VRE V T RH+ V
Sbjct: 111 VEIYRCKEEEVKEMVEVGTCRHKVGEVRETVEVGTCRHRVGEVREKVEVGTCRHRVGEVR 170
Query: 121 EMVVEETCRHKEVVVTEMVEEVTCRCMEEAVREMVVEGICRCRAAVVMEREEGVTCRCRE 180
E V ETCRHKE VVT+MVE TCR V+EM G CR V E E TCRC+E
Sbjct: 171 EKVEVETCRHKEEVVTKMVEVGTCRHKVGEVKEMEEVGTCRHMVVEVNEMVEVETCRCKE 230
Query: 181 VVVREMVVGATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRCKEEAVMEMVVVETC 240
VVVREMV CR +E VR MV ETYKH V EMV E+ + E V EMV VETC
Sbjct: 231 VVVREMVEVGICRCKEGEVRVMVEVETYKHMVEEVKEMVEVETCKHMVEEVKEMVEVETC 290
Query: 241 THMEAVEMEMVEVETCTHMEGVVMEMVEVETCR-----HMEVVEVTY-RCKEVVAMETVE 300
HM EMV VET E VV EM +V TCR E+VEV +CKE E VE
Sbjct: 291 KHMVEEVKEMVVVETYKCKEEVVREMGKVGTCRCKGEVVKEMVEVEICKCKEEEVREMVE 350
Query: 301 EETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVEMETVEVETYRRMEVVVM 360
E TCR +E V +M T RHK VREMV V TCR ETVEV T R E VV
Sbjct: 351 EATCRCREEVVRKMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEEVVT 410
Query: 361 EMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEEEICRRRGAVEEIYKHKEVVVGET 420
EM EV TCR + +EM TCRH V V EMVE E CR KEVVV E
Sbjct: 411 EMVEVVTCRHKVWEVKEMDEVGTCRHMVVEVNEMVEVETCR----------CKEVVVREM 470
Query: 421 Y-----KCKE-------VAEIYNSMEVVVKEKGEAETCKH-TEVVTC 440
KCKE E Y M VKE E ETCKH EV TC
Sbjct: 471 MDVGICKCKEGEVKVMVEVETYKHMVEEVKEMVEVETCKHMVEVETC 507
BLAST of MS010204 vs. ExPASy TrEMBL
Match:
A0A5B6WZ04 (Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029866 PE=4 SV=1)
HSP 1 Score: 275.4 bits (703), Expect = 4.2e-70
Identity = 231/484 (47.73%), Postives = 266/484 (54.96%), Query Frame = 0
Query: 1 MVVGETCKRKEEVVMEMVVEETCRR-------KEVVVTEMVEEVTCRCMEEAVREMVEVE 60
MV TC+ EVV EMV ETCR KE V EMVE +TCRC E V+EMVEVE
Sbjct: 48 MVEVGTCRHMVEVVREMVEVETCRHMVGTCRCKEEEVREMVEVMTCRCKVEEVKEMVEVE 107
Query: 61 TYRCMEEVVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVMEM 120
YRC EE V+EMV GTCR + V EMEE TCR V V EMV ETY+H E V EM
Sbjct: 108 IYRCKEEEVKEMVEVGTCRHKVGEVKEMEEVGTCRHMVVEVNEMVEVETYKHMVEEVKEM 167
Query: 121 VVEETCRHKEVVVTEMVEEVTC----------------RCMEEAVREMVVEGICRCRAAV 180
V ETC+H V EMVE TC +C EE VREM G CRC+ V
Sbjct: 168 VEVETCKHMVEEVKEMVEVETCKHMVEEVKEMVVVETYKCKEEVVREMGKVGTCRCKGEV 227
Query: 181 VMEREEGVTCRCREVVVREMVVGATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRC 240
V E E C+C+E VREMV ATCR RE VR+MV T +HK V EMV + R
Sbjct: 228 VKEMVEVEICKCKEEEVREMVEEATCRCREEVVRKMVEVGTCRHKVGEVREMVEVGTCRH 287
Query: 241 KEEAVMEMVVVETCTHMEAVEMEMVEVETCTHMEGVVMEMVEVETCRHM-----EVVEV- 300
+ V E V V TC H E V EMVEV TC H V EM EV TCRHM E+VEV
Sbjct: 288 RVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMVVEVNEMVEVE 347
Query: 301 TYRCKEVVAMETVEEETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVE--- 360
T RCKEVV E ++ C+ KEG M ETY+H V+EMV VETC+ M VE
Sbjct: 348 TCRCKEVVVREMMDVGICKCKEGEVKVMVEVETYKHMVEEVKEMVEVETCKHMVEVETCK 407
Query: 361 ------METVEVETYRRMEVVVMEMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEE 420
E V VETY+ E VV EM EV TCR + V +EMV E C+ +E V EMVEE
Sbjct: 408 HIVEEVKEMVVVETYKCKEEVVREMGEVGTCRCKGEVVKEMVVVEICKCKEGEVREMVEE 467
Query: 421 EICRRRGAVEEIYKHKEVVVGETYKCK-EVAEIYNSMEV--------VVKEKGEAETCKH 438
CR R EE+ + K V VG C+ +V E+ +EV V+E E TC+H
Sbjct: 468 ATCRCR---EEVVR-KMVEVG---TCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRH 524
BLAST of MS010204 vs. ExPASy TrEMBL
Match:
A0A5B6WWY2 (Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029866 PE=4 SV=1)
HSP 1 Score: 261.5 bits (667), Expect = 6.3e-66
Identity = 233/475 (49.05%), Postives = 258/475 (54.32%), Query Frame = 0
Query: 5 ETCKRKEEVVMEMVVEETCRRKEVVVTEMVEEVTCRCMEEAVREMVEVETYRCMEEVVRE 64
ET K KEE VMEMV TCR VV EMVE TCR M E VREMVEVET R M E +RE
Sbjct: 7 ETSKCKEEEVMEMVEVGTCRHMVEVVREMVEVETCRHMVEVVREMVEVETCRYMVEAMRE 66
Query: 65 MV--------VE-GTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVMEMVV 124
MV VE GTCR + V EM E +TCRC V+EMV E YR KEE V EMV
Sbjct: 67 MVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCRCKVEEVKEMVEVEIYRCKEEEVKEMVE 126
Query: 125 EETCRHKEVVVTEMVEEVTCRCMEEAVREMVVEGICRCRAAVVMEREEGVTCRCREVVVR 184
TCRHK V E VE TCR VRE V G CR R V E+ E TCR +E VV
Sbjct: 127 VGTCRHKVGEVRETVEVGTCRHRVGEVREKVEVGTCRHRVGEVREKVEVETCRHKEEVVT 186
Query: 185 EMV--------VG--------ATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRCKE 244
+MV VG TCRH V V EMV ET + KEV V EMV RCKE
Sbjct: 187 KMVEVGTCRHKVGEVKEMEEVGTCRHMVVEVNEMVEVETCRCKEVVVREMVEVGICRCKE 246
Query: 245 EAVMEMVVVETCTHMEAVEMEMVEVETCTHMEGVVMEMVEVETCRH-----MEVVEV-TY 304
V MV VET HM EMVEVETC HM V EMVEV TCRH E+VEV T
Sbjct: 247 GEVRVMVEVETYKHMVEEVKEMVEVETCKHMVEEVKEMVEVGTCRHKVGEVREMVEVGTC 306
Query: 305 RCKEVVAMETVEEETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVEMETVE 364
R + ETVE TCRHKE V EM T RHK V+EM V TCR M E VE
Sbjct: 307 RHRVGEVRETVEVGTCRHKEEVVTEMVEVVTCRHKVWEVKEMDEVGTCRHMVVEVNEMVE 366
Query: 365 VETYRRMEVVVMEMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEEEICRRRGAVEE 424
VET R EVVV EM +V C+ +E + MV ET +H V EMVE E C+ VE
Sbjct: 367 VETCRCKEVVVREMMDVGICKCKEGEVKVMVEVETYKHMVEEVKEMVEVETCKHMVEVET 426
Query: 425 ----IYKHKEVVVGETYKCKEVAEIYNSMEVVVKEKGEAETCKHTEVVTCGGDIL 445
+ + KE+VV ETYKCK E VV+E GE TC+ C G+++
Sbjct: 427 CKHIVEEVKEMVVVETYKCK---------EEVVREMGEVGTCR------CKGEVV 466
BLAST of MS010204 vs. ExPASy TrEMBL
Match:
A0A5B6WXT9 (Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029866 PE=4 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 1.4e-65
Identity = 230/467 (49.25%), Postives = 250/467 (53.53%), Query Frame = 0
Query: 1 MVVGETCKRKEEVVMEMV--------VE-ETCRRKEVVVTEMVEEVTCRCMEEAVREMVE 60
MV ETC+ E + EMV VE TCR KE V EMVE +TCRC E V+EMVE
Sbjct: 51 MVEVETCRYMVEAMREMVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCRCKVEEVKEMVE 110
Query: 61 VETYRCMEEVVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVM 120
VE YRC EE V+EMV GTCR + V E E TCR VRE V T RH+ V
Sbjct: 111 VEIYRCKEEEVKEMVEVGTCRHKVGEVRETVEVGTCRHRVGEVREKVEVGTCRHRVGEVR 170
Query: 121 EMVVEETCRHKEVVVTEMVEEVTCRCMEEAVREMVVEGICRCRAAVVMEREEGVTCRCRE 180
E V ETCRHKE VVT+MVE TCR V+EM G CR V E E TCRC+E
Sbjct: 171 EKVEVETCRHKEEVVTKMVEVGTCRHKVGEVKEMEEVGTCRHMVVEVNEMVEVETCRCKE 230
Query: 181 VVVREMVVGATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRCKEEAVMEMVVVETC 240
VVVREMV CR +E VR MV ETYKH V EMV E+ + E V EMV VETC
Sbjct: 231 VVVREMVEVGICRCKEGEVRVMVEVETYKHMVEEVKEMVEVETCKHMVEEVKEMVEVETC 290
Query: 241 THMEAVEMEMVEVETCTHMEGVVMEMVEVETCR-----HMEVVEVTY-RCKEVVAMETVE 300
HM EMV VET E VV EM +V TCR E+VEV +CKE E VE
Sbjct: 291 KHMVEEVKEMVVVETYKCKEEVVREMGKVGTCRCKGEVVKEMVEVEICKCKEEEVREMVE 350
Query: 301 EETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVEMETVEVETYRRMEVVVM 360
E TCR +E V +M T RHK VREMV V TCR ETVEV T R E VV
Sbjct: 351 EATCRCREEVVRKMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEEVVT 410
Query: 361 EMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEEEICRRRGAVEEIYKHKEVVVGET 420
EM EV TCR + +EM TCRH V V EMVE E CR KEVVV E
Sbjct: 411 EMVEVVTCRHKVWEVKEMDEVGTCRHMVVEVNEMVEVETCR----------CKEVVVREM 470
Query: 421 Y-----KCKE-------VAEIYNSMEVVVKEKGEAETCKH-TEVVTC 440
KCKE E Y M VKE E ETCKH EV TC
Sbjct: 471 MDVGICKCKEGEVKVMVEVETYKHMVEEVKEMVEVETCKHMVEVETC 507
BLAST of MS010204 vs. ExPASy TrEMBL
Match:
A0A5B6WWM0 (Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029866 PE=4 SV=1)
HSP 1 Score: 260.4 bits (664), Expect = 1.4e-65
Identity = 230/467 (49.25%), Postives = 250/467 (53.53%), Query Frame = 0
Query: 1 MVVGETCKRKEEVVMEMV--------VE-ETCRRKEVVVTEMVEEVTCRCMEEAVREMVE 60
MV ETC+ E + EMV VE TCR KE V EMVE +TCRC E V+EMVE
Sbjct: 51 MVEVETCRYMVEAMREMVEVGTSKNMVEVGTCRCKEEEVREMVEVMTCRCKVEEVKEMVE 110
Query: 61 VETYRCMEEVVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVM 120
VE YRC EE V+EMV GTCR + V E E TCR VRE V T RH+ V
Sbjct: 111 VEIYRCKEEEVKEMVEVGTCRHKVGEVRETVEVGTCRHRVGEVREKVEVGTCRHRVGEVR 170
Query: 121 EMVVEETCRHKEVVVTEMVEEVTCRCMEEAVREMVVEGICRCRAAVVMEREEGVTCRCRE 180
E V ETCRHKE VVT+MVE TCR V+EM G CR V E E TCRC+E
Sbjct: 171 EKVEVETCRHKEEVVTKMVEVGTCRHKVGEVKEMEEVGTCRHMVVEVNEMVEVETCRCKE 230
Query: 181 VVVREMVVGATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRCKEEAVMEMVVVETC 240
VVVREMV CR +E VR MV ETYKH V EMV E+ + E V EMV VETC
Sbjct: 231 VVVREMVEVGICRCKEGEVRVMVEVETYKHMVEEVKEMVEVETCKHMVEEVKEMVEVETC 290
Query: 241 THMEAVEMEMVEVETCTHMEGVVMEMVEVETCR-----HMEVVEVTY-RCKEVVAMETVE 300
HM EMV VET E VV EM +V TCR E+VEV +CKE E VE
Sbjct: 291 KHMVEEVKEMVVVETYKCKEEVVREMGKVGTCRCKGEVVKEMVEVEICKCKEEEVREMVE 350
Query: 301 EETCRHKEGVAMEMAVEETYRHKEVVVREMVAVETCRRMEAVEMETVEVETYRRMEVVVM 360
E TCR +E V +M T RHK VREMV V TCR ETVEV T R E VV
Sbjct: 351 EATCRCREEVVRKMVEVGTCRHKVGEVREMVEVGTCRHRVGEVRETVEVGTCRHKEEVVT 410
Query: 361 EMEEVETCRRREVVGREMVAEETCRHREVAVMEMVEEEICRRRGAVEEIYKHKEVVVGET 420
EM EV TCR + +EM TCRH V V EMVE E CR KEVVV E
Sbjct: 411 EMVEVVTCRHKVWEVKEMDEVGTCRHMVVEVNEMVEVETCR----------CKEVVVREM 470
Query: 421 Y-----KCKE-------VAEIYNSMEVVVKEKGEAETCKH-TEVVTC 440
KCKE E Y M VKE E ETCKH EV TC
Sbjct: 471 MDVGICKCKEGEVKVMVEVETYKHMVEEVKEMVEVETCKHMVEVETC 507
BLAST of MS010204 vs. ExPASy TrEMBL
Match:
A0A7J7GA92 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_024711 PE=4 SV=1)
HSP 1 Score: 244.2 bits (622), Expect = 1.0e-60
Identity = 222/458 (48.47%), Postives = 239/458 (52.18%), Query Frame = 0
Query: 1 MVVGETCKRKEEVVMEMVVEETCRRK-EVVVTEMVEEVTCRCMEEAVREMVEVETYRCME 60
MV E C+ + V EM V ETC EVV ++V VTC MEE V EM EV TY ME
Sbjct: 35 MVGEEICRCRGVEVKEMEVVETCSNTVEVVKVKVVVVVTCTHMEEGVMEMEEVGTYIHME 94
Query: 61 EVVREMVVEGTCRRRAAVVMEMEEGVTCRCGEVVVREMVVGETYRHKEEVVMEMVVEETC 120
E V EMVV TCR + EM C V V EMV ET HK VMEMVV ETC
Sbjct: 95 EEVMEMVVVETCRHKEVGETEMVVVEICIHKVVEVMEMVGVETCTHKVVEVMEMVVVETC 154
Query: 121 RHKEVVVTEMVEEVTCRCMEEAVREMVVEGICRCRAAVVMEREEGVTCRCREVVVREMVV 180
RHK V V EMV TCR E EMVV I C C+EV V EMVV
Sbjct: 155 RHKVVEVMEMVVVETCRHKEVGEMEMVVVEI----------------CICKEVEVMEMVV 214
Query: 181 GATCRHREVAVREMVVEETYKHKEVAVMEMVVGESYRCKEEAVMEMVVVETCTHMEAVEM 240
TCRH+ V EMVV E HKEV VME VV YR K VMEMVVV+ C H E M
Sbjct: 215 VETCRHKVVGEMEMVVVEICIHKEVEVMEKVVVGIYRHKVVEVMEMVVVDICRHKEVEVM 274
Query: 241 EMVEVETCTHMEGVVMEMVEVETCRHMEVVEVTYRCKEVVAMETVEEETCRHKEGVAMEM 300
EMV VETC H VM+ V V CRH KEV ME V ETCRHKE MEM
Sbjct: 275 EMVGVETCRHKVVEVMKKVVVGICRH----------KEVGVMEMVVVETCRHKEVEVMEM 334
Query: 301 AVEETYRHKEVVVREM--VAVETCRRMEAVEMETVEVETYRRMEVVVMEMEEVETCRRRE 360
V YRHKEV V EM V VE C E E V VET R EV VMEM V TCR +E
Sbjct: 335 VVVGIYRHKEVGVMEMVGVGVEICIHKEVEVREMVGVETCRHKEVGVMEMVVVVTCRHKE 394
Query: 361 VVGREMVAEETCRHREVAVMEMVEEEICRRRG--------AVEEIYKHKEVVVGETYKCK 420
VV EMV CR++EV V EMV E C+ + V EIY HKE V E K
Sbjct: 395 VVETEMVVVGICRYKEVEVTEMVVVETCKHKEVGETEMVVVVVEIYIHKEEEVTE----K 454
Query: 421 EVAEIYNSMEVVVKEKGEAETCKHTEVVTCGGDILVMV 448
V EI E VV E C+H EV GG +V+V
Sbjct: 455 VVVEICIHKEEVVTEMVVVGICRHKEV---GGTEMVVV 459
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG4167772.1 | 9.2e-72 | 49.39 | hypothetical protein ERO13_A13G216401v2 [Gossypium hirsutum] | [more] |
KAA3485897.1 | 8.7e-70 | 47.73 | putative neurofilament heavy protein [Gossypium australe] | [more] |
KAE8653504.1 | 1.1e-67 | 48.17 | hypothetical protein Csa_007345 [Cucumis sativus] | [more] |
KAA3485896.1 | 1.3e-65 | 49.05 | putative neurofilament heavy protein [Gossypium australe] | [more] |
KAA3485893.1 | 2.9e-65 | 49.25 | putative neurofilament heavy protein [Gossypium australe] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5B6WZ04 | 4.2e-70 | 47.73 | Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029... | [more] |
A0A5B6WWY2 | 6.3e-66 | 49.05 | Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029... | [more] |
A0A5B6WXT9 | 1.4e-65 | 49.25 | Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029... | [more] |
A0A5B6WWM0 | 1.4e-65 | 49.25 | Putative neurofilament heavy protein OS=Gossypium australe OX=47621 GN=EPI10_029... | [more] |
A0A7J7GA92 | 1.0e-60 | 48.47 | Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_024711 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |