MS010192 (gene) Bitter gourd (TR) v1

Overview


Name	MS010192
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cyclin-dependent protein kinase inhibitor SMR15-like
Location	scaffold391: 595288 .. 595626 (-)
RNA-Seq Expression	MS010192
Synteny	MS010192

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCTTCTGGAGGAAGAATGGCGGCAAGAACCAGAGGAAACTCCCAGAGCTTGAAGCTGAAGAAAATGAAGAAGACGAAGAAGCAGCAGCAACAGAAACTTCCAGCCCCAGCGACAGAAAACGACGTCGTTCAGTGTTCCAACGACGACATCGACGGCGGCTGCAGCACGCCGAGAGCAGAGAGATTCAGAATTCCGGAGATTGTAACATGCCCGCCGGCGCCGAAGAAGCAAAGACCCGTTTCCGATTGCTCTTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCGGAATTAGAGCTCTTCTTCTTCTTCGCGCTGCCGGACATTCCAGTC

mRNA sequence

ATGGCTCCTTCTGGAGGAAGAATGGCGGCAAGAACCAGAGGAAACTCCCAGAGCTTGAAGCTGAAGAAAATGAAGAAGACGAAGAAGCAGCAGCAACAGAAACTTCCAGCCCCAGCGACAGAAAACGACGTCGTTCAGTGTTCCAACGACGACATCGACGGCGGCTGCAGCACGCCGAGAGCAGAGAGATTCAGAATTCCGGAGATTGTAACATGCCCGCCGGCGCCGAAGAAGCAAAGACCCGTTTCCGATTGCTCTTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCGGAATTAGAGCTCTTCTTCTTCTTCGCGCTGCCGGACATTCCAGTC

Coding sequence (CDS)

ATGGCTCCTTCTGGAGGAAGAATGGCGGCAAGAACCAGAGGAAACTCCCAGAGCTTGAAGCTGAAGAAAATGAAGAAGACGAAGAAGCAGCAGCAACAGAAACTTCCAGCCCCAGCGACAGAAAACGACGTCGTTCAGTGTTCCAACGACGACATCGACGGCGGCTGCAGCACGCCGAGAGCAGAGAGATTCAGAATTCCGGAGATTGTAACATGCCCGCCGGCGCCGAAGAAGCAAAGACCCGTTTCCGATTGCTCTTTCCGGCGATCGCCAATTGCCTTTTTTGCCCCTCCGGAATTAGAGCTCTTCTTCTTCTTCGCGCTGCCGGACATTCCAGTC

Protein sequence

MAPSGGRMAARTRGNSQSLKLKKMKKTKKQQQQKLPAPATENDVVQCSNDDIDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV

Homology

[Close]

BLAST of MS010192 vs. NCBI nr
Match: XP_022148810.1 (cyclin-dependent protein kinase inhibitor SMR15-like [Momordica charantia])

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-55
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKLKKMKKTKKQQQQKLPAPATENDVVQCSNDDIDGGCSTPR 60
           MAPSGGRMAARTRGNSQSLKLKKMKKTKKQQQQKLPAPATENDVVQCSNDDIDGGCSTPR
Sbjct: 1   MAPSGGRMAARTRGNSQSLKLKKMKKTKKQQQQKLPAPATENDVVQCSNDDIDGGCSTPR 60

Query: 61  AERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV 114
           AERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV
Sbjct: 61  AERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV 113

[Close]

BLAST of MS010192 vs. NCBI nr
Match: KAG7010272.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 151.0 bits (380), Expect = 6.2e-33
Identity = 88/120 (73.33%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKKQQQQKL---PAPATENDVVQCSND--DIDG 60
           MAPSGG+MA RTR N  +LKL KK+KKTKKQQQQKL   PA A  ND V  ++D  DIDG
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQKLKQIPA-AIPNDAVHFTDDSTDIDG 60

Query: 61  GCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF-FFALPDIPV 114
           GCSTP+AERFRIPEI+TCPPAPKK RP SDCS RRSPIAFFAPPELELFF    +PDI V
Sbjct: 61  GCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPDISV 119

[Close]

BLAST of MS010192 vs. NCBI nr
Match: KAG7035865.1 (Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.7 bits (369), Expect = 1.2e-31
Identity = 83/121 (68.60%), Postives = 93/121 (76.86%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKL-KKMKK--TKKQQQQKLPAPATENDVVQCSNDDID---- 60
           MAPSGG+MA R R N ++ KL KK+KK  TKK QQ +   P  +NDVVQ  +DD D    
Sbjct: 1   MAPSGGKMATRPRRNIRTSKLNKKIKKTTTKKPQQPQNQIPPPQNDVVQFPDDDDDGGGG 60

Query: 61  -GGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIP 114
            GG STP+AERFRIPEI+TCPP PKKQRP+SDCSFRRSPIAFFAPPELELFFF A PDI 
Sbjct: 61  GGGYSTPKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDIS 120

[Close]

BLAST of MS010192 vs. NCBI nr
Match: XP_023522908.1 (cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 85/121 (70.25%), Postives = 95/121 (78.51%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKKQQQQ----KLPAPATENDVVQCSND--DID 60
           MAPSGG+MA RTR N  +LKL KK+KKTKKQQQQ    ++PA    ND V  ++D  DID
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQKLKQIPA-VILNDAVHFTDDSTDID 60

Query: 61  GGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF-FFALPDIP 114
           GGCSTP+AERFRIPEI+TCPPAPKK RP SDCS RRSPIAFFAPPELELFF    +PDI 
Sbjct: 61  GGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPDIS 120

[Close]

BLAST of MS010192 vs. NCBI nr
Match: XP_022986710.1 (cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima])

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 85/123 (69.11%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKKQQQQ------KLPAPATENDVVQCSND--D 60
           MAPSGG+MA RTR N  +LKL KK+KKTKKQQQQ      ++PA    ND V  ++D  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPA-VIPNDAVHFTDDCSD 60

Query: 61  IDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF-FFALPD 114
           IDGGCSTP+AERFRIPEI+TCPPAPKK RP SDCS RRSPIAFFAPPELELFF    +PD
Sbjct: 61  IDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPD 120

[Close]

BLAST of MS010192 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.0e-14
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 54  GGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF 105
           GGC TP+A++ RIPE++TCPPAPKKQR   +C  RR  I FFAPPE+ELFF
Sbjct: 52  GGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of MS010192 vs. ExPASy Swiss-Prot
Match: Q3ECS5 (Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 GN=SMR9 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 53  DGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFAL 109
           + GC TP  E+ RIPE++TCPPAPKKQ+   +C+ RR  IAFFAPP++ELFF FAL
Sbjct: 57  ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]

BLAST of MS010192 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05
Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 48  SNDDIDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFF 107
           + +D D   +TP A+  RIP ++ CPPAPKK++     S+   P  FF+PP+LE  F +
Sbjct: 47  NTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVFIY 103

[Close]

BLAST of MS010192 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 0


Query: 57  STPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF 105
           +TP A   RIP +  CP APKK++P   CS+      +F+PP+LE  F
Sbjct: 57  TTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of MS010192 vs. ExPASy Swiss-Prot
Match: Q1JPP8 (Cyclin-dependent protein kinase inhibitor SMR4 OS=Arabidopsis thaliana OX=3702 GN=SMR4 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-04
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 43  DVVQCSNDDIDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSP--IAFFAPPEL 102
           +VV+   +  + GC+TPR+  +RIP    CPP P+K+  V     +R P    +F PP+L
Sbjct: 2   EVVERKTEMAEEGCTTPRSTMYRIPVASVCPPPPRKKLMVVR---KRDPPRNGYFQPPDL 61

Query: 103 ELFFF 106
           E  F+
Sbjct: 62  ETLFY 63

[Close]

BLAST of MS010192 vs. ExPASy TrEMBL
Match: A0A6J1D3Z6 (cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3673 GN=LOC111017372 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 9.6e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKLKKMKKTKKQQQQKLPAPATENDVVQCSNDDIDGGCSTPR 60
           MAPSGGRMAARTRGNSQSLKLKKMKKTKKQQQQKLPAPATENDVVQCSNDDIDGGCSTPR
Sbjct: 1   MAPSGGRMAARTRGNSQSLKLKKMKKTKKQQQQKLPAPATENDVVQCSNDDIDGGCSTPR 60

Query: 61  AERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV 114
           AERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV
Sbjct: 61  AERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV 113

[Close]

BLAST of MS010192 vs. ExPASy TrEMBL
Match: A0A6J1JET4 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=LOC111484378 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.7e-32
Identity = 85/123 (69.11%), Postives = 95/123 (77.24%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKKQQQQ------KLPAPATENDVVQCSND--D 60
           MAPSGG+MA RTR N  +LKL KK+KKTKKQQQQ      ++PA    ND V  ++D  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPA-VIPNDAVHFTDDCSD 60

Query: 61  IDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF-FFALPD 114
           IDGGCSTP+AERFRIPEI+TCPPAPKK RP SDCS RRSPIAFFAPPELELFF    +PD
Sbjct: 61  IDGGCSTPKAERFRIPEILTCPPAPKKPRPASDCSLRRSPIAFFAPPELELFFCALPVPD 120

[Close]

BLAST of MS010192 vs. ExPASy TrEMBL
Match: A0A6J1FTJ6 (cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN=LOC111448665 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.3e-31
Identity = 85/123 (69.11%), Postives = 96/123 (78.05%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKL-KKMKKTKKQQQQ------KLPAPATENDVVQCSND--D 60
           MAPSGG+MA RTR N  +LKL KK+KKTKKQQQQ      ++PA A  ND V  ++D  D
Sbjct: 1   MAPSGGKMATRTRANLPNLKLNKKIKKTKKQQQQQQQKLKQIPA-AIPNDAVHFTDDSTD 60

Query: 61  IDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF-FFALPD 114
           IDGGCSTP+AERFRIP+I+TCPPAPKK RP SDCS RRSPIAFFAPPELELFF    +PD
Sbjct: 61  IDGGCSTPKAERFRIPDILTCPPAPKKPRPSSDCSLRRSPIAFFAPPELELFFCALPVPD 120

[Close]

BLAST of MS010192 vs. ExPASy TrEMBL
Match: A0A6J1H2X7 (cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=3662 GN=LOC111459621 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.8e-31
Identity = 79/115 (68.70%), Postives = 92/115 (80.00%), Query Frame = 0


Query: 1   MAPSGGRMAARTRGNSQSLKL-KKMKK-TKKQQQQKLPAPATENDVVQCSNDDIDGGCST 60
           MAPSG +MA R R N ++ K+ KK+KK T K+ Q ++P P  +NDVVQ  +DD  GG ST
Sbjct: 1   MAPSGAKMATRPRRNIRTSKVNKKIKKTTTKKPQNQIPPP--QNDVVQFPDDDGGGGYST 60

Query: 61  PRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALPDIPV 114
           P+AERFRIPEI+TCPP PKKQRP+SDCSFRRSPIAFFAPPELELFFF A PDI V
Sbjct: 61  PKAERFRIPEILTCPPGPKKQRPISDCSFRRSPIAFFAPPELELFFFIARPDISV 113

[Close]

BLAST of MS010192 vs. ExPASy TrEMBL
Match: A0A0A0L0Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 9.1e-30
Identity = 80/115 (69.57%), Postives = 90/115 (78.26%), Query Frame = 0


Query: 1   MAPSGGRMAAR-TRGNSQSLKL-KKMKKT--KKQQQQK--LPAPATENDVVQCSNDDIDG 60
           MAPSG RMA R TR    +LKL KK+KKT  KKQ  QK  +P P T+ND+V+  ++  DG
Sbjct: 1   MAPSGARMATRTTRRALPNLKLTKKIKKTTNKKQPPQKIEIPVPVTQNDIVEFGDECSDG 60

Query: 61  GCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFALP 110
           GCSTP+AER RIPEI+TCPPAPKK R VSDCS RRSPIAFFAPPELELFFF ALP
Sbjct: 61  GCSTPKAERHRIPEILTCPPAPKKPRAVSDCSLRRSPIAFFAPPELELFFFVALP 115

[Close]

BLAST of MS010192 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-15
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 54  GGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF 105
           GGC TP+A++ RIPE++TCPPAPKKQR   +C  RR  I FFAPPE+ELFF
Sbjct: 52  GGCCTPKAKKSRIPEMLTCPPAPKKQRVSKNCVLRRRQIVFFAPPEIELFF 102

[Close]

BLAST of MS010192 vs. TAIR 10
Match: AT1G51355.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20898.1); Has 52 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14
Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 53  DGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFFAL 109
           + GC TP  E+ RIPE++TCPPAPKKQ+   +C+ RR  IAFFAPP++ELFF FAL
Sbjct: 57  ESGCCTP--EKSRIPEMLTCPPAPKKQKVAQNCALRRRQIAFFAPPDVELFFVFAL 110

[Close]

BLAST of MS010192 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 48  SNDDIDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFFFF 107
           + +D D   +TP A+  RIP ++ CPPAPKK++     S+   P  FF+PP+LE  F +
Sbjct: 47  NTEDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSY--GPREFFSPPDLETVFIY 103

[Close]

BLAST of MS010192 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 9.0e-06
Identity = 21/48 (43.75%), Postives = 29/48 (60.42%), Query Frame = 0


Query: 57  STPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSPIAFFAPPELELFF 105
           +TP A   RIP +  CP APKK++P   CS+      +F+PP+LE  F
Sbjct: 57  TTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

[Close]

BLAST of MS010192 vs. TAIR 10
Match: AT5G02220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.0e-05
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 43  DVVQCSNDDIDGGCSTPRAERFRIPEIVTCPPAPKKQRPVSDCSFRRSP--IAFFAPPEL 102
           +VV+   +  + GC+TPR+  +RIP    CPP P+K+  V     +R P    +F PP+L
Sbjct: 2   EVVERKTEMAEEGCTTPRSTMYRIPVASVCPPPPRKKLMVVR---KRDPPRNGYFQPPDL 61

Query: 103 ELFFF 106
           E  F+
Sbjct: 62  ETLFY 63

The following BLAST results are available for this feature:

BLAST of MS010192 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148810.1	2.0e-55	100.00	cyclin-dependent protein kinase inhibitor SMR15-like [Momordica charantia]	[more]
KAG7010272.1	6.2e-33	73.33	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
KAG7035865.1	1.2e-31	68.60	Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma...	[more]
XP_023522908.1	2.0e-31	70.25	cyclin-dependent protein kinase inhibitor SMR15-like [Cucurbita pepo subsp. pepo...	[more]
XP_022986710.1	2.0e-31	69.11	cyclin-dependent protein kinase inhibitor SMR13 [Cucurbita maxima]	[more]

BLAST of MS010192 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IWB3	3.0e-14	66.67	Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q3ECS5	2.0e-13	62.50	Cyclin-dependent protein kinase inhibitor SMR9 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1G3Y4	4.4e-05	40.68	Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SAD3	1.3e-04	43.75	Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q1JPP8	2.8e-04	36.92	Cyclin-dependent protein kinase inhibitor SMR4 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of MS010192 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3Z6	9.6e-56	100.00	cyclin-dependent protein kinase inhibitor SMR15-like OS=Momordica charantia OX=3...	[more]
A0A6J1JET4	9.7e-32	69.11	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FTJ6	1.3e-31	69.11	cyclin-dependent protein kinase inhibitor SMR13 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1H2X7	4.8e-31	68.70	cyclin-dependent protein kinase inhibitor SMR13-like OS=Cucurbita moschata OX=36...	[more]
A0A0A0L0Q1	9.1e-30	69.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G291940 PE=4 SV=1	[more]

BLAST of MS010192 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20898.1	2.1e-15	66.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G51355.1	1.4e-14	62.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G60783.1	3.1e-06	40.68	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10690.1	9.0e-06	43.75	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G02220.1	2.0e-05	36.92	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR33142:SF8	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 16..108
IPR040389	Cyclin-dependent protein kinase inhibitor SMR	PANTHER	PTHR33142	CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13	coord: 16..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010192.1	MS010192.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032875	regulation of DNA endoreduplication