MS010185 (gene) Bitter gourd (TR) v1

Overview


Name	MS010185
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
Location	scaffold391: 558170 .. 559470 (+)
RNA-Seq Expression	MS010185
Synteny	MS010185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTGTTCAGATCGTTCGTTTCCCGCCAAGATGCGGTGAATTGGTGGCATGGATTCTCGTTCGTGGTCGTCAGCTTCGTTTTCCTTCTGGTTTTTCTCTATGCGGCGCTCGTTTCCAAGCTTCTTCCACCTTCTGGCAATATCTTCTTATCTGCTGTTCAGAACGACTGGTAACTTTTCTTAAACTTCTTCCTCTGGAAAATTTGTTTGTTCGTGTTGCTTGGATCTTGAGACGTTTACATTTTACTGAAACCGAAGAATGAAATTTCTTGGTTTGATCGAAGAGGGAGAAGGAGATTCACTTTTCGTACGGAAGTTGGAAGGAATCAAGTACCGTACGTAGCTGCTGAGAGAGAGGGGAGATGCTTTTTATCTCCATTACAAAGCCTCTGTTTCTTCTCCAGGAATATTTACTTGAAACTTTCGTGGATTTTGTTGTATTTTATGGTTTCCTTGAGGTTATAGTATTTCCCTACGGACTCAAGACGTTGAGATAGGAAACTTCTTTCTTTTTGTCTCTTAGTTTTCTTTATCTACCTTAGGAGAAAATCTCTAACTATGATTCAGCTTAAACTTCGAAGGCGACTTTGAAAGTGTAGCGTACTTGTTCTCCGTTTATATCACAAATCGTGTTTATACAGTGCCATGAGCATAGAAAAACAAGGATCAGAAAACACTCTGGTGAAGCCGTTTGTTAAATAGGAAATATAGAATATTAGAATTATAGAATTTTGAGAATCAAAGCCAGGAAAGAAATATAGCCTCACAACTTGTGATAATCACTTCTAGATGTTGTGGGCATTATGTTGGAGCTGGCTAATCGAGATATCTCTCGGTTTTGATATTCAAACAGCAATAATATTATTGTCCAGGAAAGAACGTCGACTTCTTTAGACATCCGTAGTGCTCACATCCATACCAGGAAATTTCGATGTGTAAATCCGCATGCTTGTACGCTTTTGCAGCAAATCATACCCTTGATCAGGGGACAATTTTATGTATATTGATTTAGTGATTTTGCTTTTGATCTCTTGAAAAGAATTGGTTGCCAAAGCCAAAACTATCACAACTTGAAGGAAACCAATGTGATTTATTGTTTCTCTCCCTACCATTGATTAACAATTGATCAATAAGTAGCTCTAGTGATTTTGCATTTGATCTCTTGAAAATAACCTCTATTTGTAATGCATTTGCTCTTCTTTGTTAGGTACTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCGTTTATTTCCATTGGCTAAGCATGAAACTTTTCAAGCATGCT

mRNA sequence

ATGAGTTTGTTCAGATCGTTCGTTTCCCGCCAAGATGCGGTGAATTGGTGGCATGGATTCTCGTTCGTGGTCGTCAGCTTCGTTTTCCTTCTGGTTTTTCTCTATGCGGCGCTCGTTTCCAAGCTTCTTCCACCTTCTGGCAATATCTTCTTATCTGCTGTTCAGAACGACTGGTACTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCGTTTATTTCCATTGGCTAAGCATGAAACTTTTCAAGCATGCT

Coding sequence (CDS)

ATGAGTTTGTTCAGATCGTTCGTTTCCCGCCAAGATGCGGTGAATTGGTGGCATGGATTCTCGTTCGTGGTCGTCAGCTTCGTTTTCCTTCTGGTTTTTCTCTATGCGGCGCTCGTTTCCAAGCTTCTTCCACCTTCTGGCAATATCTTCTTATCTGCTGTTCAGAACGACTGGTACTACTGTCTCCTGGTGCCCTTGACATTACCTATCCTTTATGTTGCCGTTTATTTCCATTGGCTAAGCATGAAACTTTTCAAGCATGCT

Protein sequence

MSLFRSFVSRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYYCLLVPLTLPILYVAVYFHWLSMKLFKHA

Homology

[Close]

BLAST of MS010185 vs. NCBI nr
Match: KAG6605922.1 (hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035870.1 hypothetical protein SDJN02_02669, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 140.6 bits (353), Expect = 6.5e-30
Identity = 69/88 (78.41%), Postives = 76/88 (86.36%), Query Frame = 0


Query: 1  MSLFRSFVSRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYY 60
          MS  RSFVSR++A   W GF F+VVSFVFLL+FLYAA++SKLL PS N FLSA+Q DWYY
Sbjct: 7  MSSIRSFVSREEAGYRWQGFVFIVVSFVFLLLFLYAAIISKLLSPSDNAFLSAIQKDWYY 66

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILY AVYFHWLSMKLFKHA
Sbjct: 67 CLLVPLTLPILYAAVYFHWLSMKLFKHA 94

[Close]

BLAST of MS010185 vs. NCBI nr
Match: ADN33919.1 (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 136.3 bits (342), Expect = 1.2e-28
Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 1  MSLFRSFVSRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYY 60
          MS  RS + R++AV    GF FVV+SF  LL+FLYAA++SKLLPPS N FLSA+QNDWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of MS010185 vs. NCBI nr
Match: CBI17183.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 2   SLFRSFVSRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYYC 61
           S+   FV+ +D V W  G+ F++   +F L FLYAA++SKLLPPSGN+ +SA+Q D YYC
Sbjct: 77  SITSQFVASKDRVFW--GWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYC 136

Query: 62  LLVPLTLPILYVAVYFHWLSMKLFKHA 89
            LVPLT+PIL VAVYFHWLSMKLFKHA
Sbjct: 137 FLVPLTIPILIVAVYFHWLSMKLFKHA 161

[Close]

BLAST of MS010185 vs. NCBI nr
Match: EYU17719.1 (hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata])

HSP 1 Score: 109.8 bits (273), Expect = 1.2e-20
Identity = 58/89 (65.17%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 1  MSLFRSFVSRQDAVNW-WHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWY 60
          M   R FV     + W W    F   SFVF   FLYAA+VSKLLPPS N  + A+QNDWY
Sbjct: 1  MLALREFVDSNGRIFWGWFFLIFGSFSFVF---FLYAAVVSKLLPPSDNSVIQAIQNDWY 60

Query: 61 YCLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          YC LVPLTLPIL+VAVYFHWLSMKLFKHA
Sbjct: 61 YCFLVPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of MS010185 vs. NCBI nr
Match: KAG2671123.1 (hypothetical protein I3760_14G118900 [Carya illinoinensis] >KAG6679227.1 hypothetical protein I3842_14G119700 [Carya illinoinensis])

HSP 1 Score: 107.8 bits (268), Expect = 4.7e-20
Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 9   SRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYYCLLVPLTL 68
           S +D + W  G  F+ +  +F + FL+AA+VSKLLPPS N  +S +QNDWYYC LVPLTL
Sbjct: 23  SSKDEIFW--GCLFIAIGSIFFVGFLFAAVVSKLLPPSNNALISTIQNDWYYCFLVPLTL 82

Query: 69  PILYVAVYFHWLSMKLFKHA 89
           P+L VAVYFHWLSMKLFKHA
Sbjct: 83  PVLVVAVYFHWLSMKLFKHA 100

[Close]

BLAST of MS010185 vs. ExPASy TrEMBL
Match: E5GBS7 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.0e-29
Identity = 67/88 (76.14%), Postives = 75/88 (85.23%), Query Frame = 0


Query: 1  MSLFRSFVSRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYY 60
          MS  RS + R++AV    GF FVV+SF  LL+FLYAA++SKLLPPS N FLSA+QNDWYY
Sbjct: 1  MSSIRSLIPREEAVGRRQGFFFVVLSFSLLLIFLYAAVISKLLPPSNNAFLSAIQNDWYY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of MS010185 vs. ExPASy TrEMBL
Match: A0A0A0KIB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-28
Identity = 66/88 (75.00%), Postives = 74/88 (84.09%), Query Frame = 0


Query: 1  MSLFRSFVSRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYY 60
          MS  RS + R++ V    G  FVVVSF+FLL+FLYAA +SKLLPPS N FLSA+QNDW+Y
Sbjct: 1  MSSIRSLIPREETVGRRQGVLFVVVSFLFLLIFLYAAFISKLLPPSNNAFLSAIQNDWHY 60

Query: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          CLLVPLTLPILYVAVYFHWLSMKLFKHA
Sbjct: 61 CLLVPLTLPILYVAVYFHWLSMKLFKHA 88

[Close]

BLAST of MS010185 vs. ExPASy TrEMBL
Match: F6GWB2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00160 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21
Identity = 55/87 (63.22%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 2  SLFRSFVSRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYYC 61
          S+   FV+ +D V W  G+ F++   +F L FLYAA++SKLLPPSGN+ +SA+Q D YYC
Sbjct: 4  SITSQFVASKDRVFW--GWIFLIFGSIFFLGFLYAAVISKLLPPSGNVIISAIQKDRYYC 63

Query: 62 LLVPLTLPILYVAVYFHWLSMKLFKHA 89
           LVPLT+PIL VAVYFHWLSMKLFKHA
Sbjct: 64 FLVPLTIPILIVAVYFHWLSMKLFKHA 88

[Close]

BLAST of MS010185 vs. ExPASy TrEMBL
Match: A0A022PQH2 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.0e-21
Identity = 58/89 (65.17%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 1  MSLFRSFVSRQDAVNW-WHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWY 60
          M   R FV     + W W    F   SFVF   FLYAA+VSKLLPPS N  + A+QNDWY
Sbjct: 1  MLALREFVDSNGRIFWGWFFLIFGSFSFVF---FLYAAVVSKLLPPSDNSVIQAIQNDWY 60

Query: 61 YCLLVPLTLPILYVAVYFHWLSMKLFKHA 89
          YC LVPLTLPIL+VAVYFHWLSMKLFKHA
Sbjct: 61 YCFLVPLTLPILFVAVYFHWLSMKLFKHA 86

[Close]

BLAST of MS010185 vs. ExPASy TrEMBL
Match: A0A7N0RIH6 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20
Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 8  VSRQDAVNWWHGFSFVVVSFVFLLVFLYAALVSKLLPPSGNIFLSAVQNDWYYCLLVPLT 67
          +S   A N   G   V    +FLL F+YAA++SKLLPPS N+ +SA+QNDWYYC LVPLT
Sbjct: 7  MSISSAQNVALGLILVGFGILFLLGFIYAAIISKLLPPSDNVIISAIQNDWYYCFLVPLT 66

Query: 68 LPILYVAVYFHWLSMKLFKHA 89
          LPIL VAVYFHWLSMKLFKHA
Sbjct: 67 LPILVVAVYFHWLSMKLFKHA 87

The following BLAST results are available for this feature:

BLAST of MS010185 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605922.1	6.5e-30	78.41	hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sorori...	[more]
ADN33919.1	1.2e-28	76.14	hypothetical protein [Cucumis melo subsp. melo]	[more]
CBI17183.3	4.3e-21	63.22	unnamed protein product, partial [Vitis vinifera]	[more]
EYU17719.1	1.2e-20	65.17	hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata]	[more]
KAG2671123.1	4.7e-20	63.75	hypothetical protein I3760_14G118900 [Carya illinoinensis] >KAG6679227.1 hypothe...	[more]

BLAST of MS010185 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS010185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBS7	6.0e-29	76.14	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A0A0KIB0	2.3e-28	75.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G434405 PE=4 SV=1	[more]
F6GWB2	2.1e-21	63.22	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00160 PE=4 SV=...	[more]
A0A022PQH2	6.0e-21	65.17	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a017254mg PE...	[more]
A0A7N0RIH6	1.7e-20	66.67	Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1	[more]

BLAST of MS010185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029164	Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y	PFAM	PF15159	PIG-Y	coord: 19..87 e-value: 8.8E-17 score: 61.8
None	No IPR available	PANTHER	PTHR36485	OS01G0939000 PROTEIN	coord: 17..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010185.1	MS010185.1	mRNA