MS010171 (gene) Bitter gourd (TR) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGGGGTGGTGATTTAGTGGGCGGCAAAGTTGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTGGTACATCATATTCATGCATTTACGATTCATGTGACGGTATTGATACTCCTGAAAGGTGTTCTATTTTCTCGTAGCTCGCGTTTGATATCGGATAAAGCAAATGGGGGTGGTGATTTAGTGGGCGGCAAAGTTGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTGGTACATCATATTCATGCATTTACGATTCATGTGACGGTATTGATACTCCTGAAAGGTGTTCTATTTTCTCGTAGCTCGCGTTTGATATCGGATAAAGCAAAT GGGGGTGGTGATTTAGTGGGCGGCAAAGTTGCTTTGTTACCTATTCCATTAGGAACCGCAGATTTTTTGGTACATCATATTCATGCATTTACGATTCATGTGACGGTATTGATACTCCTGAAAGGTGTTCTATTTTCTCGTAGCTCGCGTTTGATATCGGATAAAGCAAAT GGGDLVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFSRSSRLISDKAN Homology
BLAST of MS010171 vs. NCBI nr
Match: ADD30827.1 (photosystem I P700 apoprotein A1 [Ximenia americana]) HSP 1 Score: 106.3 bits (264), Expect = 8.9e-20 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS010171 vs. NCBI nr
Match: YP_009516503.1 (photosystem I P700 chlorophyll a apoprotein A1 [Malania oleifera] >AYE40898.1 photosystem I P700 chlorophyll a apoprotein A1 [Malania oleifera] >QEI59641.1 photosystem I P700 apoprotein A1 [Malania oleifera]) HSP 1 Score: 106.3 bits (264), Expect = 8.9e-20 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS010171 vs. NCBI nr
Match: YP_009456061.1 (photosystem I P700 chlorophyll a apoprotein A1 [Momordica charantia] >AUJ21828.1 photosystem I P700 chlorophyll a apoprotein A1 [Momordica charantia]) HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. NCBI nr
Match: YP_009872611.1 (photosystem I P700 apoprotein A1 [Dipentodon sinicus] >QKT26852.1 photosystem I P700 apoprotein A1 [Dipentodon sinicus]) HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. NCBI nr
Match: YP_009752920.1 (photosystem I P700 apoprotein A1 [Momordica sessilifolia] >QIT05992.1 photosystem I P700 apoprotein A1 [Momordica sessilifolia]) HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. ExPASy Swiss-Prot
Match: Q2QD89 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus OX=3659 GN=psaA PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 2.0e-22 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. ExPASy Swiss-Prot
Match: Q70Y03 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Amborella trichopoda OX=13333 GN=psaA PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 4.4e-22 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. ExPASy Swiss-Prot
Match: Q9MUJ5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Angiopteris evecta OX=13825 GN=psaA PE=3 SV=2) HSP 1 Score: 104.4 bits (259), Expect = 4.4e-22 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. ExPASy Swiss-Prot
Match: Q8S8X4 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Atropa belladonna OX=33113 GN=psaA PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 4.4e-22 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. ExPASy Swiss-Prot
Match: Q7YJX2 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Calycanthus floridus var. glaucus OX=212734 GN=psaA PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 4.4e-22 Identity = 55/59 (93.22%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. ExPASy TrEMBL
Match: A0A386Q084 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Malania oleifera OX=397392 GN=psaA PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.3e-20 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS010171 vs. ExPASy TrEMBL
Match: D3WCZ8 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Ximenia americana OX=50174 GN=psaA PE=3 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.3e-20 Identity = 56/59 (94.92%), Postives = 57/59 (96.61%), Query Frame = 0
BLAST of MS010171 vs. ExPASy TrEMBL
Match: A0A218KG56 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cucumis sativus var. hardwickii OX=319220 GN=psaA PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.3e-20 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. ExPASy TrEMBL
Match: A0A410HF85 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Trichosanthes kirilowii OX=3677 GN=psaA PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.3e-20 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. ExPASy TrEMBL
Match: A0A1L5YE72 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Ulmus pumila OX=198266 GN=psaA PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.3e-20 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 102.8 bits (255), Expect = 9.1e-23 Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0
BLAST of MS010171 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 45.1 bits (105), Expect = 2.3e-05 Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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