MS010166 (gene) Bitter gourd (TR) v1

Overview
NameMS010166
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein LATERAL ROOT PRIMORDIUM 1-like
Locationscaffold391: 362474 .. 363712 (-)
RNA-Seq ExpressionMS010166
SyntenyMS010166
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTCCGCCGCCCACCGCTCTCTCAACTACGGCCTCGGATCGGACATGGGAATGGTCGGCCTCCGCGACCTCTTCGTCGTCGCTCCGGCTTCCTCCTTCAACCACCACGACCCCAATCTCCTCTCCGATCCTCATTCCCTCAACGCTTCCAACCCCGCCACCGCCCTCGGCGTCGGAGTCGGCGTCGGCGTCAACGTCATTCCTCTTCTCACCGCCGGCCCCTGCCTCGGCGTCGACGAGGATAATATTTTGAGTACTAGTCGGAGTAGTACCAGAGGAGGAGGAGGAGGAGGGATTCAGCTATGGCAGCAGAATCAGCAGCCGACGCAGCAGTATTTGAAGAAAACGTCGTCGTCTTCGCTCGATCATCATCTCCACAATGCCTCCAACACCGATCTCGTCGCCGGCGGAATCGGCGTTTCCGGCGGTTTGGTCCCGTCCTCTTCGGCGACCACCACGTGCCAGGACTGCGGGAATCAGGCGAAGAAAGATTGTAGCCATCGCCGCTGCCGAACCTGCTGCCGAAGCCGAGGTTTCGATTGCGCGACTCACGTGAAGAGCACGTGGGTTCCAGCAGCGCGGCGGAGGGAGCGGCAACTGATGGCTGTTACAGCCACGGCGGCGGCCGGTTCCTCCGGCTCCACTTCCGGCGCAAAGAAGCCCCGGCTCATCGCCTCGCAAACCACTTCCCATACTTCCACTTCCAACACAACGCCGCCGCGGAGCCTCGATACCAGCTCCAGCCACCAAGGTCAATCGTCAAATTGGCCCTAAATTAAATTTGTTCATCAATCTTTTAGGGTTTGAAATAAAATTTTTCATCATCGATCTTTGAAATTGAGTAGGGTTTTCTTTTCGTTGAATTCGTTTGGTTCAGATGCTGGGTTTAAAGAGGCGTTGCCGGGGCAGGTACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTCACGGCGGTGGACGACGGCGACGACCAGTACGCGTATCAAGCGGTGGTGAAAATCGGCGGCCACGTCTTCAAAGGCTTCTTGTACGACCAAGGCGCCGAGGCCGGAGATGCCTTTCCAAATGTATCGGAATTGCATTTGGGAGACGGCGGCGCCGGAGGCAGAAGCAATCGGAACGGCGGCACTTCTTCCTCCCCGCTTGTTAACCCGTCCGATGTCTACAATGCGCCCGCCTCCGGCGGCGGTGCTGCAGGATTTCTCGGTGGCTCAACTTATGGTAATCATCCAATCAGC

mRNA sequence

ATGTGGTCCGCCGCCCACCGCTCTCTCAACTACGGCCTCGGATCGGACATGGGAATGGTCGGCCTCCGCGACCTCTTCGTCGTCGCTCCGGCTTCCTCCTTCAACCACCACGACCCCAATCTCCTCTCCGATCCTCATTCCCTCAACGCTTCCAACCCCGCCACCGCCCTCGGCGTCGGAGTCGGCGTCGGCGTCAACGTCATTCCTCTTCTCACCGCCGGCCCCTGCCTCGGCGTCGACGAGGATAATATTTTGAGTACTAGTCGGAGTAGTACCAGAGGAGGAGGAGGAGGAGGGATTCAGCTATGGCAGCAGAATCAGCAGCCGACGCAGCAGTATTTGAAGAAAACGTCGTCGTCTTCGCTCGATCATCATCTCCACAATGCCTCCAACACCGATCTCGTCGCCGGCGGAATCGGCGTTTCCGGCGGTTTGGTCCCGTCCTCTTCGGCGACCACCACGTGCCAGGACTGCGGGAATCAGGCGAAGAAAGATTGTAGCCATCGCCGCTGCCGAACCTGCTGCCGAAGCCGAGGTTTCGATTGCGCGACTCACGTGAAGAGCACGTGGGTTCCAGCAGCGCGGCGGAGGGAGCGGCAACTGATGGCTGTTACAGCCACGGCGGCGGCCGGTTCCTCCGGCTCCACTTCCGGCGCAAAGAAGCCCCGGCTCATCGCCTCGCAAACCACTTCCCATACTTCCACTTCCAACACAACGCCGCCGCGGAGCCTCGATACCAGCTCCAGCCACCAAGATGCTGGGTTTAAAGAGGCGTTGCCGGGGCAGGTACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTCACGGCGGTGGACGACGGCGACGACCAGTACGCGTATCAAGCGGTGGTGAAAATCGGCGGCCACGTCTTCAAAGGCTTCTTGTACGACCAAGGCGCCGAGGCCGGAGATGCCTTTCCAAATGTATCGGAATTGCATTTGGGAGACGGCGGCGCCGGAGGCAGAAGCAATCGGAACGGCGGCACTTCTTCCTCCCCGCTTGTTAACCCGTCCGATGTCTACAATGCGCCCGCCTCCGGCGGCGGTGCTGCAGGATTTCTCGGTGGCTCAACTTATGGTAATCATCCAATCAGC

Coding sequence (CDS)

ATGTGGTCCGCCGCCCACCGCTCTCTCAACTACGGCCTCGGATCGGACATGGGAATGGTCGGCCTCCGCGACCTCTTCGTCGTCGCTCCGGCTTCCTCCTTCAACCACCACGACCCCAATCTCCTCTCCGATCCTCATTCCCTCAACGCTTCCAACCCCGCCACCGCCCTCGGCGTCGGAGTCGGCGTCGGCGTCAACGTCATTCCTCTTCTCACCGCCGGCCCCTGCCTCGGCGTCGACGAGGATAATATTTTGAGTACTAGTCGGAGTAGTACCAGAGGAGGAGGAGGAGGAGGGATTCAGCTATGGCAGCAGAATCAGCAGCCGACGCAGCAGTATTTGAAGAAAACGTCGTCGTCTTCGCTCGATCATCATCTCCACAATGCCTCCAACACCGATCTCGTCGCCGGCGGAATCGGCGTTTCCGGCGGTTTGGTCCCGTCCTCTTCGGCGACCACCACGTGCCAGGACTGCGGGAATCAGGCGAAGAAAGATTGTAGCCATCGCCGCTGCCGAACCTGCTGCCGAAGCCGAGGTTTCGATTGCGCGACTCACGTGAAGAGCACGTGGGTTCCAGCAGCGCGGCGGAGGGAGCGGCAACTGATGGCTGTTACAGCCACGGCGGCGGCCGGTTCCTCCGGCTCCACTTCCGGCGCAAAGAAGCCCCGGCTCATCGCCTCGCAAACCACTTCCCATACTTCCACTTCCAACACAACGCCGCCGCGGAGCCTCGATACCAGCTCCAGCCACCAAGATGCTGGGTTTAAAGAGGCGTTGCCGGGGCAGGTACGTGCACCGGCGGTTTTCAAGTGCGTGAGAGTCACGGCGGTGGACGACGGCGACGACCAGTACGCGTATCAAGCGGTGGTGAAAATCGGCGGCCACGTCTTCAAAGGCTTCTTGTACGACCAAGGCGCCGAGGCCGGAGATGCCTTTCCAAATGTATCGGAATTGCATTTGGGAGACGGCGGCGCCGGAGGCAGAAGCAATCGGAACGGCGGCACTTCTTCCTCCCCGCTTGTTAACCCGTCCGATGTCTACAATGCGCCCGCCTCCGGCGGCGGTGCTGCAGGATTTCTCGGTGGCTCAACTTATGGTAATCATCCAATCAGC

Protein sequence

MWSAAHRSLNYGLGSDMGMVGLRDLFVVAPASSFNHHDPNLLSDPHSLNASNPATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQYLKKTSSSSLDHHLHNASNTDLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTSHTSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKIGGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPASGGGAAGFLGGSTYGNHPIS
Homology
BLAST of MS010166 vs. NCBI nr
Match: XP_038902210.1 (protein LATERAL ROOT PRIMORDIUM 1-like [Benincasa hispida])

HSP 1 Score: 597.8 bits (1540), Expect = 6.3e-167
Identity = 321/376 (85.37%), Postives = 338/376 (89.89%), Query Frame = 0

Query: 1   MWS--AAHRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNPA 60
           MWS  AA RSLNYGLGS+MGMVGLRD++VVAPASSFN     HD NL+SDPHSL  SNPA
Sbjct: 1   MWSAAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNPNPHQHDANLMSDPHSLAVSNPA 60

Query: 61  TALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQYL 120
           TALGVGVGVG  VIPLLTAGPCLGV+E+N+LS +RSS+R   GGGIQLWQQNQQ TQ YL
Sbjct: 61  TALGVGVGVG--VIPLLTAGPCLGVEEENLLS-NRSSSR---GGGIQLWQQNQQSTQHYL 120

Query: 121 KKTSSSSLDHHLHNAS--NTDLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCR 180
           KKT S+SLDHHLHNAS  N DL+ GGIGVSGGL  SSSATTTCQDCGNQAKKDCSHRRCR
Sbjct: 121 KKTPSASLDHHLHNASGANNDLIGGGIGVSGGLASSSSATTTCQDCGNQAKKDCSHRRCR 180

Query: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTSH 240
           TCCRSRGFDCATHVKSTWVPAARRRERQLM VTAT AAGSSGSTSGAKKPRLIASQTTSH
Sbjct: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMTVTATFAAGSSGSTSGAKKPRLIASQTTSH 240

Query: 241 TSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKI 300
           TSTSNTTPPRSLDTSSSHQDAGFKE LPGQVRAPAVFKCVRVTAV+DGDD+YAYQAVVKI
Sbjct: 241 TSTSNTTPPRSLDTSSSHQDAGFKETLPGQVRAPAVFKCVRVTAVEDGDDEYAYQAVVKI 300

Query: 301 GGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPAS 360
           GGHVFKG LYDQG EAGDAFPNVSELHLGDGG+GGR+NRN G+SSSPLV+PSDVYNA AS
Sbjct: 301 GGHVFKGLLYDQGVEAGDAFPNVSELHLGDGGSGGRNNRN-GSSSSPLVDPSDVYNAAAS 360

Query: 361 GGGAA-GFLGGSTYGN 368
           GGG   GFLGG  YGN
Sbjct: 361 GGGGVPGFLGGPNYGN 369

BLAST of MS010166 vs. NCBI nr
Match: XP_023512287.1 (protein LATERAL ROOT PRIMORDIUM 1-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577.4 bits (1487), Expect = 8.8e-161
Identity = 310/377 (82.23%), Postives = 329/377 (87.27%), Query Frame = 0

Query: 1   MWS---AAHRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNP 60
           +WS   AA RSLNYGLGS+MGMVGLRD++VVAPA+SFN    HHDPNL+SD HSL ASN 
Sbjct: 57  LWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAASNS 116

Query: 61  ATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQY 120
           ATALGVGVGVG  VIPLLTAGPCLGV+EDN+L  SRS +R   GGGIQLWQQNQQ TQ Y
Sbjct: 117 ATALGVGVGVG--VIPLLTAGPCLGVEEDNLLG-SRSGSR---GGGIQLWQQNQQSTQHY 176

Query: 121 LKKTSSSSLDHHLHNAS--NTDLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRC 180
           LKKT SSSLDHHLHNAS  N DL+ GGIGV GGL  SSSATTTCQDCGNQAKKDCS  RC
Sbjct: 177 LKKTPSSSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRC 236

Query: 181 RTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTS 240
           RTCCRSRGFDCATHVKSTWVPAARRRERQLMA+T TAA GSSGS SG KKPRLIASQTTS
Sbjct: 237 RTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTS 296

Query: 241 HTSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVK 300
           HTSTSNTTPP S+DTSSSHQDAGFKE LPGQ+RAPAVFKCVRVTAVDDG+D+YAYQAVVK
Sbjct: 297 HTSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVK 356

Query: 301 IGGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPA 360
           IGGHVFKGFLYDQG EAGD FPNVSELHL DGG G R+NRN G+SS+P V+PSDVYNA A
Sbjct: 357 IGGHVFKGFLYDQGVEAGDGFPNVSELHLSDGGGGSRNNRN-GSSSAPFVDPSDVYNAAA 416

Query: 361 SG-GGAAGFLGGSTYGN 368
           SG GGA GFLGGS YGN
Sbjct: 417 SGNGGAPGFLGGSNYGN 426

BLAST of MS010166 vs. NCBI nr
Match: KAG7010293.1 (Protein LATERAL ROOT PRIMORDIUM 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 576.6 bits (1485), Expect = 1.5e-160
Identity = 310/376 (82.45%), Postives = 329/376 (87.50%), Query Frame = 0

Query: 1   MWS---AAHRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNP 60
           MWS   AA RSLNYGLGS+MGMVGLRD++VVAPA+SFN    HHDPNL+SD HSL  SN 
Sbjct: 1   MWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAVSNS 60

Query: 61  ATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQY 120
           ATALGVGVGVG  VIPLLTAGPCLGV+EDN+L  SRS +R   GGGIQLWQQNQQ TQ Y
Sbjct: 61  ATALGVGVGVG--VIPLLTAGPCLGVEEDNLLG-SRSGSR---GGGIQLWQQNQQSTQHY 120

Query: 121 LKKTSSSSLDHHLHNASNT-DLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCR 180
           LKKT SSSLDHHLHNAS T DL+ GGIGV GGL  SSSATTTCQDCGNQAKKDCS  RCR
Sbjct: 121 LKKTPSSSLDHHLHNASGTNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCR 180

Query: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTSH 240
           TCCRSRGFDCATHVKSTWVPAARRRERQLMA+T TAA GSSGS SG KKPRLIASQTTSH
Sbjct: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTSH 240

Query: 241 TSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKI 300
           TSTSNTTPP S+DTSSSHQDAGFKE LPGQ+RAPAVFKCVRVTAVDDG+D+YAYQAVVKI
Sbjct: 241 TSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKI 300

Query: 301 GGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPAS 360
           GGHVFKGFLYDQG EAGD FPNVSEL+L DGG GGR+NRN G+SS+P V+PSDVYNA AS
Sbjct: 301 GGHVFKGFLYDQGVEAGDGFPNVSELNLSDGGGGGRNNRN-GSSSAPFVDPSDVYNAAAS 360

Query: 361 G-GGAAGFLGGSTYGN 368
           G GGA GFLGGS YGN
Sbjct: 361 GNGGAPGFLGGSNYGN 369

BLAST of MS010166 vs. NCBI nr
Match: XP_022987026.1 (protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita maxima])

HSP 1 Score: 573.5 bits (1477), Expect = 1.3e-159
Identity = 308/376 (81.91%), Postives = 326/376 (86.70%), Query Frame = 0

Query: 1   MWS---AAHRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNP 60
           MWS   AA RSLNYGLGS+MGMVGLRD++VVAPA+SFN    HHDPNL+SD HSL  SN 
Sbjct: 1   MWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAVSNS 60

Query: 61  ATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQY 120
           ATALGVGVGVG  VIPLLTAGPCLGV+EDN+L  SRS +R   GGGIQLWQQNQQ TQ Y
Sbjct: 61  ATALGVGVGVG--VIPLLTAGPCLGVEEDNLLG-SRSGSR---GGGIQLWQQNQQSTQHY 120

Query: 121 LKKTSSSSLDHHLHNASNT-DLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCR 180
           LKKT SSSLDHHLHNAS T DL+ GGIGV GGL  SSSATTTCQDCGNQAKKDCS  RCR
Sbjct: 121 LKKTPSSSLDHHLHNASGTNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCR 180

Query: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTSH 240
           TCCRSRGFDCATHVKSTWVPAARRRERQLMA+T TAA GSSGS SG KKPRLIASQTTSH
Sbjct: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTSH 240

Query: 241 TSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKI 300
           TSTSNTTPP S+DTSSSHQDAGFKE LPGQ+RAPAVFKCVRVTAVDDG+D+YAYQAVVKI
Sbjct: 241 TSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKI 300

Query: 301 GGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPAS 360
           GGHVFKGFLYDQG +AGD FPNVSELHL DGG G R+NRNG  SS+P V+PSDVYN  AS
Sbjct: 301 GGHVFKGFLYDQGVDAGDGFPNVSELHLSDGGGGSRNNRNG--SSAPFVDPSDVYNVAAS 360

Query: 361 G-GGAAGFLGGSTYGN 368
           G GGA GFLGGS YGN
Sbjct: 361 GNGGAPGFLGGSNYGN 368

BLAST of MS010166 vs. NCBI nr
Match: KAG6570417.1 (Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 573.2 bits (1476), Expect = 1.7e-159
Identity = 308/374 (82.35%), Postives = 328/374 (87.70%), Query Frame = 0

Query: 1   MWS---AAHRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNP 60
           MWS   AA RSLNYGLGS+MGMVGLRD++VVAPA+SFN    HHDPNL+SD HSL  SN 
Sbjct: 59  MWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAVSNS 118

Query: 61  ATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQY 120
           ATALGVGVGVG  VIPLLTAGPCLGV+EDN+L+ SRS +R   GGGIQLWQQNQQ TQ Y
Sbjct: 119 ATALGVGVGVG--VIPLLTAGPCLGVEEDNLLA-SRSGSR---GGGIQLWQQNQQSTQHY 178

Query: 121 LKKTSSSSLDHHLHNASNT-DLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCR 180
           LKKT SSSLDHHLHNAS T DL+ GGIGV GGL  SSSATTTCQDCGNQAKKDCS  RCR
Sbjct: 179 LKKTPSSSLDHHLHNASGTNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCR 238

Query: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTSH 240
           TCCRSRGFDCATHVKSTWVPAARRRERQLMA+T TAA GSSGS SG KKPRLIASQTTSH
Sbjct: 239 TCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTSH 298

Query: 241 TSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKI 300
           TSTSNTTPP S+DTSSSHQDAGFKE LPGQ+RAPAVFKCVRVTAVDDG+D+YAYQAVVKI
Sbjct: 299 TSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKI 358

Query: 301 GGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPAS 360
           GGHVFKGFLYDQG EAGD FPNVSEL+L DGG GGR+NRN G+SS+P V+PSDVYNA AS
Sbjct: 359 GGHVFKGFLYDQGVEAGDGFPNVSELNLSDGGGGGRNNRN-GSSSAPFVDPSDVYNAAAS 418

Query: 361 G-GGAAGFLGGSTY 366
           G GGA GFLGGS Y
Sbjct: 419 GNGGAPGFLGGSNY 425

BLAST of MS010166 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-78
Identity = 186/351 (52.99%), Postives = 229/351 (65.24%), Query Frame = 0

Query: 17  MGMVGLRDLFVVAPASSFNHHDPNLLSDPHSLNASNPATALGVGVGVGVNVIPLLTAG-P 76
           MGMVGLRD+F+VAPA  ++H +  ++S    +N SN A A  +GVG    VIPLLTAG P
Sbjct: 1   MGMVGLRDVFLVAPA--YHHQNAGVISGSDHMN-SNAAAAAALGVG----VIPLLTAGTP 60

Query: 77  CLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQYLKKTSSSSLDHHLHNASNTDLV 136
              V++ +I             G  + WQ N           +++    +LH  S     
Sbjct: 61  QQNVEDSDINFL----------GNNRRWQNN-----------NNNHETQYLHFKSTNQTT 120

Query: 137 AGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAAR 196
            G    + G    +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AAR
Sbjct: 121 VGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAAR 180

Query: 197 RRERQLMAVTATAAAGSSGST-SGAKKPRLIAS------QTTSHTSTSNTTPPRSLDTSS 256
           RRERQ+M   A   AGSS ST SG KKPR++ S      Q TSHTSTSN TPP+S +TSS
Sbjct: 181 RRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSS 240

Query: 257 SHQD-AGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKIGGHVFKGFLYDQGAE 316
           S QD  G +EA PGQVRA AVFKCVRVTAV+DGDD+YAYQAVVKIGGHVFKGFLYDQG E
Sbjct: 241 SRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLE 300

Query: 317 AGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPASGGGAAG 359
             + FP++S+LHLG    G  +N NG ++S+P+++P +V      GGG+ G
Sbjct: 301 PKEGFPSMSDLHLG----GSANNHNGVSASAPILDPPNV--VYGGGGGSGG 316

BLAST of MS010166 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.6e-38
Identity = 111/265 (41.89%), Postives = 144/265 (54.34%), Query Frame = 0

Query: 101 QLWQQNQQPTQQYLKKTSSSSLDHHLH-NASNTDLVAG-GIGVSGGLVPSSSATTTCQDC 160
           Q+W   Q P +Q L       + HH H    + DL  G  I VS     S S T +C+DC
Sbjct: 48  QVW---QIPPEQML-------MHHHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDC 107

Query: 161 GNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSG 220
           GNQAKKDC+H RCRTCC+SRGFDC+THV+STW+P ARRRERQ     +T+  G    + G
Sbjct: 108 GNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGG 167

Query: 221 A-----KKPRLIASQTTSHTSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVR 280
           A       P+     T   TS+S+  P  S            + + PG+V + A+F+CV+
Sbjct: 168 AGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMG------EASFPGEVSSDALFRCVK 227

Query: 281 VTAVDD-GDDQYAYQAVVKIGGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRN 340
           ++ VDD GD QYAYQ  V IGGH+FKG LYDQG       P  S +  G GG+  +S+  
Sbjct: 228 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQG-------PESSYMSGGSGGSDHQSSSA 286

Query: 341 GGTSSSPLVNPSDVYNAPASGGGAA 358
           GG       NP  V +    GGG +
Sbjct: 288 GGGGGGHPFNPPVVTD---GGGGVS 286

BLAST of MS010166 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-34
Identity = 106/253 (41.90%), Postives = 142/253 (56.13%), Query Frame = 0

Query: 102 LWQQNQQPTQQYLKKTSSSSLDHHLHNASNTDLVAGGIGVSGGLVPSSSATTTCQDCGNQ 161
           ++QQ QQ  Q+    TS++ L     N S  +   G + +      S S   +CQDCGNQ
Sbjct: 69  IFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRS--GSGSGGPSCQDCGNQ 128

Query: 162 AKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKK 221
           +KKDCSH RCRTCC+SRG DC THVKSTWVPAA+RRERQ    T        GS    ++
Sbjct: 129 SKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLGGSVPKRQR 188

Query: 222 PRLIASQTTSHTSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGD 281
            R+ A      TS + T  P     ++S  + G     P +V + AVF+CVRV++VDD +
Sbjct: 189 ERIPARS----TSMAYTRIP---SNNTSGLEVG---NFPPEVSSSAVFRCVRVSSVDDEE 248

Query: 282 DQYAYQAVVKIGGHVFKGFLYDQG-AEAGDAFPNVSELHLGDGG-AGGRSNRNGGTSSSP 341
           ++YAY+  V IGGHVFKG LYDQG AE   +      L+L   G +   S+ N   ++  
Sbjct: 249 EEYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGV 308

Query: 342 LVNPSDVYNAPAS 353
           + + SD Y  PAS
Sbjct: 309 VGSTSDHYIDPAS 309

BLAST of MS010166 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.3e-33
Identity = 80/167 (47.90%), Postives = 101/167 (60.48%), Query Frame = 0

Query: 142 SGGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQL 201
           +GG   +      CQDCGNQAKKDC H RCRTCC+SRGFDC THVKSTWV AA+RRERQ 
Sbjct: 106 TGGFTVTRQGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQA 165

Query: 202 MAVTATAAAGSSGSTSGAKKPRLIASQTTSHTST---SNTTPPRSLDTSSSHQDAGFKEA 261
                 A      ++ G         +   + S    S     R ++ SSS  +      
Sbjct: 166 QLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSH--- 225

Query: 262 LPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKIGGHVFKGFLYDQG 306
           LP ++ +PAVF+C+RV+++DD D++YAYQ  V IGGHVFKG LYDQG
Sbjct: 226 LPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQG 269

BLAST of MS010166 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.3e-33
Identity = 80/175 (45.71%), Postives = 105/175 (60.00%), Query Frame = 0

Query: 143 GGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLM 202
           GG   +      CQDCGNQAKKDC H RCRTCC+SRGF C THVKSTWVPAA+RRER   
Sbjct: 113 GGFTVTRQGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQ 172

Query: 203 AVTATAAAGSSGSTSGAKKPRLIA----SQTTSHTSTSNTTPPRS-LDTSSSHQDAGFKE 262
             +    + SS  T  AK+ R  +    +    H+    +    + +  ++S+      +
Sbjct: 173 LASLQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQ 232

Query: 263 ALPGQVRAPAVFKCVRVTAV--DDGDDQYAYQAVVKIGGHVFKGFLYDQGAEAGD 311
            LP +V +PA+F+CVRV+++  D+ D  YAYQ  V IGGH+FKG LYDQG E  D
Sbjct: 233 HLPPEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQD 287

BLAST of MS010166 vs. ExPASy TrEMBL
Match: A0A6J1JCY6 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita maxima OX=3661 GN=LOC111484595 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 6.2e-160
Identity = 308/376 (81.91%), Postives = 326/376 (86.70%), Query Frame = 0

Query: 1   MWS---AAHRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNP 60
           MWS   AA RSLNYGLGS+MGMVGLRD++VVAPA+SFN    HHDPNL+SD HSL  SN 
Sbjct: 1   MWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAVSNS 60

Query: 61  ATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQY 120
           ATALGVGVGVG  VIPLLTAGPCLGV+EDN+L  SRS +R   GGGIQLWQQNQQ TQ Y
Sbjct: 61  ATALGVGVGVG--VIPLLTAGPCLGVEEDNLLG-SRSGSR---GGGIQLWQQNQQSTQHY 120

Query: 121 LKKTSSSSLDHHLHNASNT-DLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCR 180
           LKKT SSSLDHHLHNAS T DL+ GGIGV GGL  SSSATTTCQDCGNQAKKDCS  RCR
Sbjct: 121 LKKTPSSSLDHHLHNASGTNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRCR 180

Query: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTSH 240
           TCCRSRGFDCATHVKSTWVPAARRRERQLMA+T TAA GSSGS SG KKPRLIASQTTSH
Sbjct: 181 TCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTSH 240

Query: 241 TSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKI 300
           TSTSNTTPP S+DTSSSHQDAGFKE LPGQ+RAPAVFKCVRVTAVDDG+D+YAYQAVVKI
Sbjct: 241 TSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVKI 300

Query: 301 GGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPAS 360
           GGHVFKGFLYDQG +AGD FPNVSELHL DGG G R+NRNG  SS+P V+PSDVYN  AS
Sbjct: 301 GGHVFKGFLYDQGVDAGDGFPNVSELHLSDGGGGSRNNRNG--SSAPFVDPSDVYNVAAS 360

Query: 361 G-GGAAGFLGGSTYGN 368
           G GGA GFLGGS YGN
Sbjct: 361 GNGGAPGFLGGSNYGN 368

BLAST of MS010166 vs. ExPASy TrEMBL
Match: A0A6J1FY67 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448991 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.4e-159
Identity = 308/377 (81.70%), Postives = 327/377 (86.74%), Query Frame = 0

Query: 1   MWS---AAHRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNP 60
           MWS   AA RSLNYGLGS+MGMVGLRD++VVAPA+SFN    HHDPNL+SD HSL  SN 
Sbjct: 1   MWSAAAAAQRSLNYGLGSEMGMVGLRDVYVVAPAASFNPNPHHHDPNLISDDHSLAVSNS 60

Query: 61  ATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQY 120
           ATALGVGVGVG  VIPLLTAGPCLGV+EDN+L  SRS +R   GGGIQLWQQN Q TQ Y
Sbjct: 61  ATALGVGVGVG--VIPLLTAGPCLGVEEDNLLG-SRSGSR---GGGIQLWQQNHQSTQHY 120

Query: 121 LKKTSSSSLDHHLHNAS--NTDLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRC 180
           LKKT SSSLDHHLHNAS  N DL+ GGIGV GGL  SSSATTTCQDCGNQAKKDCS  RC
Sbjct: 121 LKKTPSSSLDHHLHNASGTNNDLIGGGIGVFGGLASSSSATTTCQDCGNQAKKDCSRGRC 180

Query: 181 RTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTS 240
           RTCCRSRGFDCATHVKSTWVPAARRRERQLMA+T TAA GSSGS SG KKPRLIASQTTS
Sbjct: 181 RTCCRSRGFDCATHVKSTWVPAARRRERQLMAITGTAADGSSGSASGTKKPRLIASQTTS 240

Query: 241 HTSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVK 300
           HTSTSNTTPP S+DTSSSHQDAGFKE LPGQ+RAPAVFKCVRVTAVDDG+D+YAYQAVVK
Sbjct: 241 HTSTSNTTPPGSIDTSSSHQDAGFKEELPGQIRAPAVFKCVRVTAVDDGEDEYAYQAVVK 300

Query: 301 IGGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPA 360
           IGGHVFKGFLYDQG EAGD FPNVSEL+L DGG G R+NRN G+SS+P V+PSDVYNA A
Sbjct: 301 IGGHVFKGFLYDQGVEAGDGFPNVSELNLSDGGGGSRNNRN-GSSSAPFVDPSDVYNAAA 360

Query: 361 SG-GGAAGFLGGSTYGN 368
           SG GGA GFLGGS YGN
Sbjct: 361 SGNGGAPGFLGGSNYGN 370

BLAST of MS010166 vs. ExPASy TrEMBL
Match: A0A6J1K371 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490748 PE=3 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 3.6e-152
Identity = 302/376 (80.32%), Postives = 318/376 (84.57%), Query Frame = 0

Query: 1   MWSAA---HRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNP 60
           MWSAA    RSLNYGLGS+M MVGLRD+FVVAPASSFN     HD NLLSDPHSL  SNP
Sbjct: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHPHDNNLLSDPHSLAVSNP 60

Query: 61  ATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQY 120
           ATALGVG      VIPLLTAGPCLGV+EDN+LS +RSS R   GGGIQLWQQN      Y
Sbjct: 61  ATALGVG------VIPLLTAGPCLGVEEDNLLS-NRSSNR---GGGIQLWQQN-----HY 120

Query: 121 LKKTSSSSLDHHLHN--ASNTDLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRC 180
           LKK   SSLD+HLHN  A+N  L+  GIG++GGL  SSSATTTCQDCGNQAKKDCSHRRC
Sbjct: 121 LKK-MPSSLDNHLHNPSAANNGLIDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRC 180

Query: 181 RTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTS 240
           RTCCRSRGFDC THVKSTWVPAARRRERQLM V A AAAGSSGSTSGAKKPRLIASQTTS
Sbjct: 181 RTCCRSRGFDCTTHVKSTWVPAARRRERQLMGVAANAAAGSSGSTSGAKKPRLIASQTTS 240

Query: 241 HTSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVK 300
            TSTSNTTPPRSLDTSSSHQDAGF EALPGQVRAPAVFKCVRVTAVDDGDD+YAYQAVVK
Sbjct: 241 RTSTSNTTPPRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVK 300

Query: 301 IGGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPA 360
           IGGH+FKGFLYDQG E GD FPNVSELHLGDGG   R+NRNG +SSSPLV+PSDVYNA A
Sbjct: 301 IGGHIFKGFLYDQGVEPGDEFPNVSELHLGDGGGLTRNNRNGVSSSSPLVDPSDVYNAAA 360

Query: 361 SGGGAAGFLGGSTYGN 368
           +GGGA  FLGGS YGN
Sbjct: 361 TGGGAPCFLGGSNYGN 360

BLAST of MS010166 vs. ExPASy TrEMBL
Match: A0A6J1H2U0 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459511 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 5.2e-151
Identity = 302/377 (80.11%), Postives = 317/377 (84.08%), Query Frame = 0

Query: 1   MWSAA---HRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNP 60
           MWSAA    RSLNYGLGS+M MVGLRD+FVVAPASSFN    HHD NLLSDPHSL  SN 
Sbjct: 1   MWSAAAASQRSLNYGLGSEMSMVGLRDVFVVAPASSFNPNPHHHDNNLLSDPHSLAVSNS 60

Query: 61  ATALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQY 120
           ATALGVG      VIPLLTAGPCLGV+EDN+LS +RSS R   GGGIQLWQQN      Y
Sbjct: 61  ATALGVG------VIPLLTAGPCLGVEEDNLLS-NRSSNR---GGGIQLWQQN-----HY 120

Query: 121 LKKTSSSSLDHHLHN--ASNTDLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRC 180
           LKK   SSLDHHLHN  A+N  L+  GIG++GGL  SSSATTTCQDCGNQAKKDCSHRRC
Sbjct: 121 LKK-MPSSLDHHLHNPSAANNGLIDDGIGITGGLASSSSATTTCQDCGNQAKKDCSHRRC 180

Query: 181 RTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSGAKKPRLIASQTTS 240
           RTCCRSRGFDC THVKSTWVPAARRRERQLM VTA AAAGSS STSGAKK RLIASQTTS
Sbjct: 181 RTCCRSRGFDCTTHVKSTWVPAARRRERQLMGVTANAAAGSSASTSGAKKQRLIASQTTS 240

Query: 241 HTSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVK 300
            TSTSNTTPPRSLDTSSSHQDAGF EALPGQVRAPAVFKCVRVTAVDDGDD+YAYQAVVK
Sbjct: 241 RTSTSNTTPPRSLDTSSSHQDAGFPEALPGQVRAPAVFKCVRVTAVDDGDDEYAYQAVVK 300

Query: 301 IGGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPA 360
           IGGH+FKGFLYDQG E GD FPNVSELHLGDGG   R+NRNG +SSSPLV+PSDVYNA A
Sbjct: 301 IGGHIFKGFLYDQGVEPGDEFPNVSELHLGDGGGITRNNRNGVSSSSPLVDPSDVYNAAA 360

Query: 361 SGGGAAG-FLGGSTYGN 368
           +GGG A  FLGGS YGN
Sbjct: 361 TGGGGAPCFLGGSNYGN 361

BLAST of MS010166 vs. ExPASy TrEMBL
Match: A0A5A7V0Q8 (Protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00770 PE=3 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 8.4e-149
Identity = 298/375 (79.47%), Postives = 315/375 (84.00%), Query Frame = 0

Query: 1   MWS-AAHRSLNYGLGSDMGMVGLRDLFVVAPASSFN----HHDPNLLSDPHSLNASNPAT 60
           MWS AA RSLNYGLGS+MGMVGLRD++VVAPASSFN     HD NLLSDPHSL  SNPAT
Sbjct: 55  MWSAAAQRSLNYGLGSEMGMVGLRDVYVVAPASSFNQNPHQHDVNLLSDPHSLAVSNPAT 114

Query: 61  ALGVGVGVGVNVIPLLTAGPCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQYLK 120
           ALGVGVGVG  VIPLLTAGPC+GV+E+N+   +RSS RGGG        Q QQ TQ YLK
Sbjct: 115 ALGVGVGVG--VIPLLTAGPCVGVEEENLFG-NRSSNRGGG-------IQFQQSTQHYLK 174

Query: 121 KTSSSSLDHHLHNASNTDLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCC 180
           KT S SLDH   + +N +L+ GGIG SGGL  SSSATTTCQDCGNQAKKDCSHRRCRTCC
Sbjct: 175 KTPSGSLDH--VSGTNNELIGGGIGGSGGLASSSSATTTCQDCGNQAKKDCSHRRCRTCC 234

Query: 181 RSRGFDCATHVKSTWVPAARRRERQLMAVTATAAA-GSSGSTSGAKKPRLIASQTTSHTS 240
           RSRGFDCATHVKSTWVPAARRRERQLMAVTATAAA GSS STSGAKKPRLI SQTTSHTS
Sbjct: 235 RSRGFDCATHVKSTWVPAARRRERQLMAVTATAAADGSSASTSGAKKPRLIPSQTTSHTS 294

Query: 241 TSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKIGG 300
           TSNTTPPRSLDTSSSHQD G KEALPGQ+RA AVFKCVRVTAVDDGDD+YAY A+VKIGG
Sbjct: 295 TSNTTPPRSLDTSSSHQDVGNKEALPGQIRAQAVFKCVRVTAVDDGDDEYAYHAMVKIGG 354

Query: 301 HVFKGFLYDQGAEAGDAFPNVSELHLGDG-GAGGRSNRNGGTSSSPLVNPSDVYNAPASG 360
           HVFKGFLYDQG EAGD FPNVSELHLGDG G GG  N   G+SSSPLV+PSDVYN  ASG
Sbjct: 355 HVFKGFLYDQGVEAGDGFPNVSELHLGDGVGGGGTINNRNGSSSSPLVDPSDVYNTAASG 414

Query: 361 -GGAAGFLGGSTYGN 368
            GG  GFLGGS YGN
Sbjct: 415 SGGVPGFLGGSNYGN 417

BLAST of MS010166 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 299.3 bits (765), Expect = 4.3e-81
Identity = 191/365 (52.33%), Postives = 236/365 (64.66%), Query Frame = 0

Query: 8   SLNYGLGS-----DMGMVGLRDLFVVAPASSFNHHDPNLLSDPHSLNASNPATALGVGVG 67
           S+ YGL S     +MGMVGLRD+F+VAPA  ++H +  ++S    +N SN A A  +GVG
Sbjct: 74  SVRYGLPSSAAATEMGMVGLRDVFLVAPA--YHHQNAGVISGSDHMN-SNAAAAAALGVG 133

Query: 68  VGVNVIPLLTAG-PCLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQYLKKTSSSS 127
               VIPLLTAG P   V++ +I             G  + WQ N           +++ 
Sbjct: 134 ----VIPLLTAGTPQQNVEDSDINFL----------GNNRRWQNN-----------NNNH 193

Query: 128 LDHHLHNASNTDLVAGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFD 187
              +LH  S      G    + G    +S T TCQDCGNQAKK+C  RRCRTCC+SRGFD
Sbjct: 194 ETQYLHFKSTNQTTVGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFD 253

Query: 188 CATHVKSTWVPAARRRERQLMAVTATAAAGSSGST-SGAKKPRLIAS------QTTSHTS 247
           C+THVKSTWV AARRRERQ+M   A   AGSS ST SG KKPR++ S      Q TSHTS
Sbjct: 254 CSTHVKSTWVSAARRRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTS 313

Query: 248 TSNTTPPRSLDTSSSHQD-AGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKIG 307
           TSN TPP+S +TSSS QD  G +EA PGQVRA AVFKCVRVTAV+DGDD+YAYQAVVKIG
Sbjct: 314 TSN-TPPQSFETSSSRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIG 373

Query: 308 GHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPASG 359
           GHVFKGFLYDQG E  + FP++S+LHLG    G  +N NG ++S+P+++P +V      G
Sbjct: 374 GHVFKGFLYDQGLEPKEGFPSMSDLHLG----GSANNHNGVSASAPILDPPNV--VYGGG 403

BLAST of MS010166 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 295.0 bits (754), Expect = 8.2e-80
Identity = 186/351 (52.99%), Postives = 229/351 (65.24%), Query Frame = 0

Query: 17  MGMVGLRDLFVVAPASSFNHHDPNLLSDPHSLNASNPATALGVGVGVGVNVIPLLTAG-P 76
           MGMVGLRD+F+VAPA  ++H +  ++S    +N SN A A  +GVG    VIPLLTAG P
Sbjct: 1   MGMVGLRDVFLVAPA--YHHQNAGVISGSDHMN-SNAAAAAALGVG----VIPLLTAGTP 60

Query: 77  CLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQYLKKTSSSSLDHHLHNASNTDLV 136
              V++ +I             G  + WQ N           +++    +LH  S     
Sbjct: 61  QQNVEDSDINFL----------GNNRRWQNN-----------NNNHETQYLHFKSTNQTT 120

Query: 137 AGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAAR 196
            G    + G    +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AAR
Sbjct: 121 VGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAAR 180

Query: 197 RRERQLMAVTATAAAGSSGST-SGAKKPRLIAS------QTTSHTSTSNTTPPRSLDTSS 256
           RRERQ+M   A   AGSS ST SG KKPR++ S      Q TSHTSTSN TPP+S +TSS
Sbjct: 181 RRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSS 240

Query: 257 SHQD-AGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKIGGHVFKGFLYDQGAE 316
           S QD  G +EA PGQVRA AVFKCVRVTAV+DGDD+YAYQAVVKIGGHVFKGFLYDQG E
Sbjct: 241 SRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLE 300

Query: 317 AGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPASGGGAAG 359
             + FP++S+LHLG    G  +N NG ++S+P+++P +V      GGG+ G
Sbjct: 301 PKEGFPSMSDLHLG----GSANNHNGVSASAPILDPPNV--VYGGGGGSGG 316

BLAST of MS010166 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 295.0 bits (754), Expect = 8.2e-80
Identity = 186/351 (52.99%), Postives = 229/351 (65.24%), Query Frame = 0

Query: 17  MGMVGLRDLFVVAPASSFNHHDPNLLSDPHSLNASNPATALGVGVGVGVNVIPLLTAG-P 76
           MGMVGLRD+F+VAPA  ++H +  ++S    +N SN A A  +GVG    VIPLLTAG P
Sbjct: 1   MGMVGLRDVFLVAPA--YHHQNAGVISGSDHMN-SNAAAAAALGVG----VIPLLTAGTP 60

Query: 77  CLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQYLKKTSSSSLDHHLHNASNTDLV 136
              V++ +I             G  + WQ N           +++    +LH  S     
Sbjct: 61  QQNVEDSDINFL----------GNNRRWQNN-----------NNNHETQYLHFKSTNQTT 120

Query: 137 AGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAAR 196
            G    + G    +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AAR
Sbjct: 121 VGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAAR 180

Query: 197 RRERQLMAVTATAAAGSSGST-SGAKKPRLIAS------QTTSHTSTSNTTPPRSLDTSS 256
           RRERQ+M   A   AGSS ST SG KKPR++ S      Q TSHTSTSN TPP+S +TSS
Sbjct: 181 RRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSS 240

Query: 257 SHQD-AGFKEALPGQVRAPAVFKCVRVTAVDDGDDQYAYQAVVKIGGHVFKGFLYDQGAE 316
           S QD  G +EA PGQVRA AVFKCVRVTAV+DGDD+YAYQAVVKIGGHVFKGFLYDQG E
Sbjct: 241 SRQDGGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGLE 300

Query: 317 AGDAFPNVSELHLGDGGAGGRSNRNGGTSSSPLVNPSDVYNAPASGGGAAG 359
             + FP++S+LHLG    G  +N NG ++S+P+++P +V      GGG+ G
Sbjct: 301 PKEGFPSMSDLHLG----GSANNHNGVSASAPILDPPNV--VYGGGGGSGG 316

BLAST of MS010166 vs. TAIR 10
Match: AT5G12330.3 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 173.7 bits (439), Expect = 2.7e-43
Identity = 119/243 (48.97%), Postives = 146/243 (60.08%), Query Frame = 0

Query: 17  MGMVGLRDLFVVAPASSFNHHDPNLLSDPHSLNASNPATALGVGVGVGVNVIPLLTAG-P 76
           MGMVGLRD+F+VAPA  ++H +  ++S    +N SN A A  +GVG    VIPLLTAG P
Sbjct: 1   MGMVGLRDVFLVAPA--YHHQNAGVISGSDHMN-SNAAAAAALGVG----VIPLLTAGTP 60

Query: 77  CLGVDEDNILSTSRSSTRGGGGGGIQLWQQNQQPTQQYLKKTSSSSLDHHLHNASNTDLV 136
              V++ +I             G  + WQ N           +++    +LH  S     
Sbjct: 61  QQNVEDSDINFL----------GNNRRWQNN-----------NNNHETQYLHFKSTNQTT 120

Query: 137 AGGIGVSGGLVPSSSATTTCQDCGNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAAR 196
            G    + G    +S T TCQDCGNQAKK+C  RRCRTCC+SRGFDC+THVKSTWV AAR
Sbjct: 121 VGTSSNNSGSGSGASGTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAAR 180

Query: 197 RRERQLMAVTATAAAGSSGST-SGAKKPRLIAS------QTTSHTSTSNTTPPRSLDTSS 252
           RRERQ+M   A   AGSS ST SG KKPR++ S      Q TSHTSTSN TPP+S +TSS
Sbjct: 181 RRERQVMPTGANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSN-TPPQSFETSS 214

BLAST of MS010166 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-39
Identity = 111/265 (41.89%), Postives = 144/265 (54.34%), Query Frame = 0

Query: 101 QLWQQNQQPTQQYLKKTSSSSLDHHLH-NASNTDLVAG-GIGVSGGLVPSSSATTTCQDC 160
           Q+W   Q P +Q L       + HH H    + DL  G  I VS     S S T +C+DC
Sbjct: 48  QVW---QIPPEQML-------MHHHSHPQQQSLDLYPGHQIDVSDLATSSRSITISCRDC 107

Query: 161 GNQAKKDCSHRRCRTCCRSRGFDCATHVKSTWVPAARRRERQLMAVTATAAAGSSGSTSG 220
           GNQAKKDC+H RCRTCC+SRGFDC+THV+STW+P ARRRERQ     +T+  G    + G
Sbjct: 108 GNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHMSTSGGGGGSGSGG 167

Query: 221 A-----KKPRLIASQTTSHTSTSNTTPPRSLDTSSSHQDAGFKEALPGQVRAPAVFKCVR 280
           A       P+     T   TS+S+  P  S            + + PG+V + A+F+CV+
Sbjct: 168 AGGGGSSIPKRHRDPTLPGTSSSSRLPSHSAGLEMG------EASFPGEVSSDALFRCVK 227

Query: 281 VTAVDD-GDDQYAYQAVVKIGGHVFKGFLYDQGAEAGDAFPNVSELHLGDGGAGGRSNRN 340
           ++ VDD GD QYAYQ  V IGGH+FKG LYDQG       P  S +  G GG+  +S+  
Sbjct: 228 MSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQG-------PESSYMSGGSGGSDHQSSSA 286

Query: 341 GGTSSSPLVNPSDVYNAPASGGGAA 358
           GG       NP  V +    GGG +
Sbjct: 288 GGGGGGHPFNPPVVTD---GGGGVS 286

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902210.16.3e-16785.37protein LATERAL ROOT PRIMORDIUM 1-like [Benincasa hispida][more]
XP_023512287.18.8e-16182.23protein LATERAL ROOT PRIMORDIUM 1-like, partial [Cucurbita pepo subsp. pepo][more]
KAG7010293.11.5e-16082.45Protein LATERAL ROOT PRIMORDIUM 1 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022987026.11.3e-15981.91protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita maxima][more]
KAG6570417.11.7e-15982.35Protein LATERAL ROOT PRIMORDIUM 1, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Q94CK91.1e-7852.99Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S... [more]
O655172.6e-3841.89Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1[more]
Q9XGX01.3e-3441.90Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1[more]
Q9FXH73.3e-3347.90Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1[more]
Q9LQZ54.3e-3345.71Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1JCY66.2e-16081.91protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114845... [more]
A0A6J1FY671.4e-15981.70protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC11144... [more]
A0A6J1K3713.6e-15280.32protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114907... [more]
A0A6J1H2U05.2e-15180.11protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145... [more]
A0A5A7V0Q88.4e-14979.47Protein LATERAL ROOT PRIMORDIUM 1-like isoform X1 OS=Cucumis melo var. makuwa OX... [more]
Match NameE-valueIdentityDescription
AT5G12330.44.3e-8152.33Lateral root primordium (LRP) protein-related [more]
AT5G12330.28.2e-8052.99Lateral root primordium (LRP) protein-related [more]
AT5G12330.18.2e-8052.99Lateral root primordium (LRP) protein-related [more]
AT5G12330.32.7e-4348.97Lateral root primordium (LRP) protein-related [more]
AT4G36260.11.8e-3941.89Lateral root primordium (LRP) protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006511SHORT INTERNODES, C-terminalTIGRFAMTIGR01624TIGR01624coord: 259..305
e-value: 7.5E-30
score: 100.6
IPR006510Zinc finger, lateral root primordium type 1TIGRFAMTIGR01623TIGR01623coord: 154..196
e-value: 4.5E-26
score: 88.5
NoneNo IPR availablePFAMPF05142DUF702coord: 152..307
e-value: 3.5E-62
score: 209.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 206..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..345
NoneNo IPR availablePANTHERPTHR31604:SF30PROTEIN LATERAL ROOT PRIMORDIUM 1coord: 17..367
IPR007818SHI protein familyPANTHERPTHR31604PROTEIN LATERAL ROOT PRIMORDIUM 1coord: 17..367

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS010166.1MS010166.1mRNA