MS010150 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTCCCTCTCTTCGAAGCTCAAACCCGAATTTTACCACTTCAGACTTCTCTGTACTTCTTCTTCTTCTTCAGTTCACCCTCCACAAATTCCTGCAAGACCTTCTTCTTCTGGCCGGAAAGAGAGCGGTGGAGCTGCTAAACTGAAGATCGCCCATTCTCAACTCAAGGACAACTGGTTGGCGTCTCTTTCCTCTCCTTTTCCTCTAGGTCACGATCACCCCATCAATGGTAGCCGAGGAGACCTAAATGCGAGTTCCGACTGTGTTATTGGGGTCGATCCTGATGTTTCTGGTGCGGTGGCGCTCTTGAGAACCGACTACTCGGTTTGTTCCGCTCAGGTAATCGGTTTCGTACCACGTATTTGTTGCTTCGATTTTTTTTTTCTTGTTTTTTATACATTCGTCTAATGTGCTTAAGTTTGATGGTCATATTTGACTAAAGAGGTTGATATAATTTTTTTTTTTTTTTAATCTTTATGTTCTTCAATTTGTCAGGTATATGATTCTCCACACCTGCAAGTACTGGTTGGTGGAAGGAGACGGAAACGTTTAGATGCCAAGTCAATAGTCCAGCTTCTTCATAGCTTCAATGCCCCCATTGGTATGATTGTCCATCTGTAGGTTATTGCTCCTGATTGAACATTTATGAGTTGCTGCATTTATGTAGGGGTTGGGGTTGTCTTTATTTGATGCTCAATTGACATTCATGTTTCGGTGTAAGATAACTGTGATCATAACAGAAAGAATATTTGAATTTTTATTGCCAACTAATTTATGTAGAGAAATTGAGAATGTCCTTTGATCTCTCTTTCCCTCGTAAATATTTACAAAAAGTTCCTAAAGAAAAAGAAAATCCTATATTCATCATATTGAGTTTCACTTCTTCAACTGAAGCTCCTTAGTTTCACACATCTTTTTTATGTTTCTTTAGTAAGAAAACATTCTGGTATCCTTGTTCTCTTCTTCCCTTTGCTTCTAGGGTTTTCTCATATTTTGATGCATACTTCTGTTTTGTTCATTAATCACATATGTAACTCTGTCTTTAATGAGTTGCCAATCCCTATCTCTAGGAACTACTGCATATCTGGAACAGTCAACCCCATATCCACAGGATGGAAAACAGGTACACGTTTCATTTTAATGGGAGGATTCTGTTGGACCTAGATCTTATGCTAAGAAGATGCAATCCTGTTTACAATTGACCACACTTTTTTTTCTTTATTTTTTTTTGGAATAATCATTTATTTATTTTTCATATGTTATCGGGTAAGTGGTATGACTTATTTGAAAGGAGAGGACCAAGATAATTTTTAAAGATAATCCTGGGTCCATGCCAGGAATTGTAGGGCTATGATGGGGGAGGTGCTTTTATTCCCCCTTTTCGGGATAAGGGTCGTTTTTTGTGACAGGCTTGCTTTCTAGCTATGTTATGGGGTATTTGGCTGGAGAGAAATCATATAGTGTTTAGGGGGGTGGAAAAGTTTGTGGATTATGTTTGGGACATTGTTAGATTTAACACTTCGTTATGGGGCTCGGTTTCTCATCTCTTTTGTAATTATTCGCTTGGCCTTATTCTTTTGGATTGGAGCCCTTTTCTTTAGGGGGCTTCCTCTTGCTGGGCTGTTTTTTTATGCCCTTTTTAGGCCTTTTGGTGTATATTTTGTATCCTTTTCATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATAATACGGAGGAGTTACGTTTTGTGTGTGTGCGTGCCAATTTTTCTCTATTTTTTTAGAGCTTCCATGACATGTCTTTCTTATTTTGCAAGATTGGTTGAGCTGTAATCCATAAATTTTGTTTTGTAGAACAAATCATCTTACCCATCTTTCTATCTCTTTCCTTCTTTTAATTTTTTTTCGCACTTTTTGCATAACAGTTTTTGAAGTAGAGCGTGTGTTTTAACCTTACTGGCCTTACATTTTGAGATGCAAGTTTTAGTTTAGCTTCATTCATTTCATTAGAAGAAGGAATATGATTAGTTGGTTGGGGCTTTCCTTGGTTTTTTCTTTTCCTCTTCTTCTTCTCTTCTTATTTCTTTCTAATTCCATTCTTTGTGTTTAAGGGATGGTGGAGTGGAGGATTTGGTTATGGATTGTGGATTGGCATATTAGTTGGGCTAGGATTTTCTGTTATTCCTGTGCCATCTCTTGCGTGGAAAAACAAATTTGAGCTCTCGGGAAAGGATACTTCTAAGGTCAGTTCAGCCAAATAACCTACATTAGTCAAGCTAGTTGTTTAATTCATATATAGATCAAACACTTCACAATGTTCAATATTACCAAGGGCAAGCTAAGTAGTCTTTTATCGTATATTTGATATCTTAATCTTCAGTGCGTGTTAGCAATATGTAAAAAGTTATTTGCAGAACATACAATTATGGTTGAGTTCTATTTTAATTTAATGATTTTACAATTTATATTTTCTTTGACAATCATCCCATGATTCATTCTGACAAAGGAGAAAGTTCTTCCTATCTCCTTCATAACAAATGCTTTGCAACTTGTTATTTGACCTGTAACAGTGTAACTTCTCCTAGGTAATTAGCAAGCTTTGCATGCTGATAAGAGAACTCTTCTTATATAAAAGGAAGTTATTTTGATAAAGTTACACACATGTTATAGGACAGAAAAATAGTTGAGGGACAAAACTCAACAGGTTCTCTCCAAAATTGAAAACAGGGCAACCATTTATCCGAATAAATGGTTATATTTCTGGTTAGTTTTTAAAACTTGACTTTTGCTGATATGTGAAAAATTATTCTCTTATCACTTCCATGAAAATAGTTCAAAAGGTTACAGAGCCATCCCTGCTCGTTTACCATTGTAATCTCTTTTAGTATAATAATTTTAACCTCTTTTAGTATAATAATTTTTCTTGGAATAAAATGTTTTAGAAGTTGATGAATTTATACTGGAAGCCAATAGAGACCAACTTGGTTTTAATTTATTTCTTGTTATTAGTTAAAAAATTTCCTCGCTATATTCCCTTTGGAGGACTGTTTCTATATTACTTGGTTATACTCGGCGGTGGATGAAAAAGCCATTTTTTTACAGCTAATTACATTTTATGTAATTTCACTTGGACCTTGAAATTATTTACTTATATTGGTTTCAAGAATTGGTTTCTCTATTCTCCTAGTAAGCGCTAAAAGTCGGTTATATTCATTATGCAATCCTGAGCTTTGTGATTATATGTTTTATTCTATATTCTTTTGTCCAAAAGTTTTCTCTCCTAGACTTATTTTATTTTGTTTTCAATATTTACTTGGTAGGACGATAGCCGAAGAGTTGCATCTACATTATTTCCGTCTCTAAGCCCCCTTCTGAAAAGGAAAAAAGATCATGGTATTTTATCTTGTATTCTGTCCTCCGCTTTTTTTTAATGGCGAATACTTCTATATTTGCTTGAGATTTCCAATACCATACCTCATGAATTTCGATACGTATTCTGTACTCTTGGGCCTTTTAACTTGGCTCTACCAAGTTAGAGTAACTAACGTGAAGATAAACACTTGTTTTTTGAATATTTTTATGTTTAATCTGAAAACTTGACTATGATTTATTCCTTCAGCTGAGATGTCGTGAAGCTATTCTACCTATCTAAAGAATTTCTTTTCCATCATAGATTTGCACAAGATTTCCTATAGAAGTAGTGACTAAGTTTATGGCTCCTACCATCAGAAACGAATGTGAGAAATGTCCACTTGTTTAGAACTGTCTTTAACATGGCTTACTTATCAGCGTGTTATCTTGTAATTACCAGATTATTTTCAGCTCATTGGAATTCTTTTTTGGAATTACCTCTCAACATTTGTATCTTCATTTCATTTGTGTCATGAACCAGGAAAAACAGAGTTCGGGTTGATTTGATGAAAATTATTCTTTCATGAACCAGTAAAATATATTCGACTTGCAGAAGTAATCTCTATGATTTTGATCTTCATGGCCCCCTTATGATTTCCTCATATTTGCAGGAAGGGCCGAGGCTTTACTCATTGCTGCTTATGGAAAAGGCCTGAACATGAATCTAGAAACACCATGTGTCTTACAGGAATCGATAGCGTCT ATGAACTCCCTCTCTTCGAAGCTCAAACCCGAATTTTACCACTTCAGACTTCTCTGTACTTCTTCTTCTTCTTCAGTTCACCCTCCACAAATTCCTGCAAGACCTTCTTCTTCTGGCCGGAAAGAGAGCGGTGGAGCTGCTAAACTGAAGATCGCCCATTCTCAACTCAAGGACAACTGGTTGGCGTCTCTTTCCTCTCCTTTTCCTCTAGGTCACGATCACCCCATCAATGGTAGCCGAGGAGACCTAAATGCGAGTTCCGACTGTGTTATTGGGGTCGATCCTGATGTTTCTGGTGCGGTGGCGCTCTTGAGAACCGACTACTCGGTTTGTTCCGCTCAGGTATATGATTCTCCACACCTGCAAGTACTGGTTGGTGGAAGGAGACGGAAACGTTTAGATGCCAAGTCAATAGTCCAGCTTCTTCATAGCTTCAATGCCCCCATTGGAACTACTGCATATCTGGAACAGTCAACCCCATATCCACAGGATGGAAAACAGGGATGGTGGAGTGGAGGATTTGGTTATGGATTGTGGATTGGCATATTAGTTGGGCTAGGATTTTCTGTTATTCCTGTGCCATCTCTTGCGTGGAAAAACAAATTTGAGCTCTCGGGAAAGGATACTTCTAAGGACGATAGCCGAAGAGTTGCATCTACATTATTTCCGTCTCTAAGCCCCCTTCTGAAAAGGAAAAAAGATCATGGAAGGGCCGAGGCTTTACTCATTGCTGCTTATGGAAAAGGCCTGAACATGAATCTAGAAACACCATGTGTCTTACAGGAATCGATAGCGTCT ATGAACTCCCTCTCTTCGAAGCTCAAACCCGAATTTTACCACTTCAGACTTCTCTGTACTTCTTCTTCTTCTTCAGTTCACCCTCCACAAATTCCTGCAAGACCTTCTTCTTCTGGCCGGAAAGAGAGCGGTGGAGCTGCTAAACTGAAGATCGCCCATTCTCAACTCAAGGACAACTGGTTGGCGTCTCTTTCCTCTCCTTTTCCTCTAGGTCACGATCACCCCATCAATGGTAGCCGAGGAGACCTAAATGCGAGTTCCGACTGTGTTATTGGGGTCGATCCTGATGTTTCTGGTGCGGTGGCGCTCTTGAGAACCGACTACTCGGTTTGTTCCGCTCAGGTATATGATTCTCCACACCTGCAAGTACTGGTTGGTGGAAGGAGACGGAAACGTTTAGATGCCAAGTCAATAGTCCAGCTTCTTCATAGCTTCAATGCCCCCATTGGAACTACTGCATATCTGGAACAGTCAACCCCATATCCACAGGATGGAAAACAGGGATGGTGGAGTGGAGGATTTGGTTATGGATTGTGGATTGGCATATTAGTTGGGCTAGGATTTTCTGTTATTCCTGTGCCATCTCTTGCGTGGAAAAACAAATTTGAGCTCTCGGGAAAGGATACTTCTAAGGACGATAGCCGAAGAGTTGCATCTACATTATTTCCGTCTCTAAGCCCCCTTCTGAAAAGGAAAAAAGATCATGGAAGGGCCGAGGCTTTACTCATTGCTGCTTATGGAAAAGGCCTGAACATGAATCTAGAAACACCATGTGTCTTACAGGAATCGATAGCGTCT MNSLSSKLKPEFYHFRLLCTSSSSSVHPPQIPARPSSSGRKESGGAAKLKIAHSQLKDNWLASLSSPFPLGHDHPINGSRGDLNASSDCVIGVDPDVSGAVALLRTDYSVCSAQVYDSPHLQVLVGGRRRKRLDAKSIVQLLHSFNAPIGTTAYLEQSTPYPQDGKQGWWSGGFGYGLWIGILVGLGFSVIPVPSLAWKNKFELSGKDTSKDDSRRVASTLFPSLSPLLKRKKDHGRAEALLIAAYGKGLNMNLETPCVLQESIAS Homology
BLAST of MS010150 vs. NCBI nr
Match: XP_022153090.1 (uncharacterized protein LOC111020674 isoform X1 [Momordica charantia]) HSP 1 Score: 526.9 bits (1356), Expect = 9.8e-146 Identity = 263/266 (98.87%), Postives = 263/266 (98.87%), Query Frame = 0
BLAST of MS010150 vs. NCBI nr
Match: XP_023512747.1 (Holliday junction resolvase MOC1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 455.3 bits (1170), Expect = 3.6e-124 Identity = 227/267 (85.02%), Postives = 242/267 (90.64%), Query Frame = 0
BLAST of MS010150 vs. NCBI nr
Match: XP_022943519.1 (Holliday junction resolvase MOC1, chloroplastic [Cucurbita moschata]) HSP 1 Score: 454.1 bits (1167), Expect = 8.1e-124 Identity = 226/266 (84.96%), Postives = 241/266 (90.60%), Query Frame = 0
BLAST of MS010150 vs. NCBI nr
Match: XP_038902489.1 (Holliday junction resolvase MOC1, chloroplastic [Benincasa hispida]) HSP 1 Score: 453.8 bits (1166), Expect = 1.1e-123 Identity = 226/275 (82.18%), Postives = 245/275 (89.09%), Query Frame = 0
BLAST of MS010150 vs. NCBI nr
Match: KAG7010304.1 (hypothetical protein SDJN02_27097 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 452.6 bits (1163), Expect = 2.4e-123 Identity = 226/264 (85.61%), Postives = 240/264 (90.91%), Query Frame = 0
BLAST of MS010150 vs. ExPASy Swiss-Prot
Match: Q8GWA2 (Holliday junction resolvase MOC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MOC1 PE=1 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.3e-60 Identity = 120/197 (60.91%), Postives = 143/197 (72.59%), Query Frame = 0
BLAST of MS010150 vs. ExPASy Swiss-Prot
Match: A8ITB0 (Holliday junction resolvase MOC1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=MOC1 PE=3 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.7e-13 Identity = 41/102 (40.20%), Postives = 56/102 (54.90%), Query Frame = 0
BLAST of MS010150 vs. ExPASy TrEMBL
Match: A0A6J1DFT4 (uncharacterized protein LOC111020674 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020674 PE=4 SV=1) HSP 1 Score: 526.9 bits (1356), Expect = 4.8e-146 Identity = 263/266 (98.87%), Postives = 263/266 (98.87%), Query Frame = 0
BLAST of MS010150 vs. ExPASy TrEMBL
Match: A0A6J1FUK2 (Holliday junction resolvase MOC1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448269 PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 3.9e-124 Identity = 226/266 (84.96%), Postives = 241/266 (90.60%), Query Frame = 0
BLAST of MS010150 vs. ExPASy TrEMBL
Match: A0A6J1JDX6 (Holliday junction resolvase MOC1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483654 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 4.8e-122 Identity = 218/256 (85.16%), Postives = 233/256 (91.02%), Query Frame = 0
BLAST of MS010150 vs. ExPASy TrEMBL
Match: A0A6J1DJM7 (uncharacterized protein LOC111020674 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020674 PE=4 SV=1) HSP 1 Score: 426.4 bits (1095), Expect = 8.7e-116 Identity = 210/215 (97.67%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of MS010150 vs. ExPASy TrEMBL
Match: A0A5D3B8B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00620 PE=4 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 3.7e-114 Identity = 206/253 (81.42%), Postives = 224/253 (88.54%), Query Frame = 0
BLAST of MS010150 vs. TAIR 10
Match: AT2G26840.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1); Has 835 Blast hits to 835 proteins in 26 species: Archae - 0; Bacteria - 25; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 2; Other Eukaryotes - 768 (source: NCBI BLink). ) HSP 1 Score: 233.8 bits (595), Expect = 1.6e-61 Identity = 120/197 (60.91%), Postives = 143/197 (72.59%), Query Frame = 0
BLAST of MS010150 vs. TAIR 10
Match: AT2G26840.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43910.1). ) HSP 1 Score: 212.2 bits (539), Expect = 5.0e-55 Identity = 119/250 (47.60%), Postives = 143/250 (57.20%), Query Frame = 0
BLAST of MS010150 vs. TAIR 10
Match: AT3G43910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26840.1); Has 680 Blast hits to 680 proteins in 17 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 635 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 1.2e-21 Identity = 68/180 (37.78%), Postives = 99/180 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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