MS010101 (gene) Bitter gourd (TR) v1

Overview


Name	MS010101
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ras-related protein RABC2a-like
Location	scaffold779: 653460 .. 656267 (-)
RNA-Seq Expression	MS010101
Synteny	MS010101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGGTTCTTCTTCAAAAGGAAGATGGTTTAGCTACGATTACTCTTTCAAGATTTTGTTGATTGGGGACTCTGGTGTGGGAAAAAGCAGTATTCTCCTCAGTTACATCTCCAATTTTGTTCATGATCTCTCTCCCACCATCGGTTCTCTCTCTTTCCCTCTTTCTATATTTGCATGTTTGTTTTGGTTTCAAATTACCCAGATGTTCTATTCACGGTTTCCTTCTTACTTCCATTGTTTTTCTTCTCCCCTGTTCTTAGTTTGCTGGTTTCAATTTTGTGATTGATTTCTGGAATTTCTTCAAGTGCTTTCTGAATTGGGATTTCATGCTGGAAATGGTTTCTCTGTCTCTAACTATCTTCAAGGGCTAAATATTGTTAGAATCAACTTTGTGGTTTAGTAAATTTATTCCTAAATATTGATTAGTTCAGGACTTGAGAGAGACATATTGAGATTTTCATTGTTAAGGAGCTTTTAGAGAGAATTAAACGGTAGCCTAGATAGATAGTAGTTTTTTTTTTTCCTTCTTAAACAGGCAATTTCTAATAGAGAAGCTTGTGATTGGTTCATCATCTATGGATTAGTTGAGGTGAAATATTCTTATGTGTATGCATATGATCGATAGGCCGTGAAATGATACTTCTGATCGAGAAAATATCGTCGATAAGTATAGTTAGATGTGATGAGTGCTTGTATTATACATATGTTTGTAATGCTGCTCATGATTTCCCATTTTAATCAATATAACATAATTTCCATCTCCTGTTTAAACTTGAAATATGGTTTGACGCTTTTGCCCGGAAGTAATGTTTTGTAAGTTTTCGGTAAGTAGATAACAACAATGGGCAATGATATTATATCGGACGAGCTCTCTCATATAATCTTCAATTTGTTTGTTGTGTGGCTTCAGGTGTGGATTTCAAGATCAAGACTGTAACAGTTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGGTATGGATGATTGACTAGTTCTTTCTGGTCTCATTTTTACTATTTTTCCTCCGGCCGTTCTTCTACGATCATCCACTTATCTTAGAAAGTTATTCCCCCATGTAATGTGAGAAATAGCATTTGTCTCAAGTTCTTGGTGGTAAAAGATAAAAAATAAAACAGCCTTGTGAACTTGACACTCTTTATCGAGGATTTTTGTCGTTTCATTCAAGACACTTTCCAGTACGTGAATCCTATGTTCTTATATGCAGCTGGACAAGAGCGGTTCGGAATGTTGACAAGCTCTTACTATAGAGGTGCACATGGAATCATTCTAGGTATGCCAGAGAGGAAATAATCTTTGACATTCTTCTATTTTATTGGGAATGTTGATTAGCTACCTTTCATGAGTTGCTGTTTCATCTTAATTTCCTTCATGGATTTGTAAAATGAAAAATTCAGCAATTGAGAGCATATGGAGACTTTTTTTGCTCAGTAATTTAAGACAACAAGGATAAAGAACTGAGATAATAGAAACAGGATGAAAGAGATGTAGTCAATTAGTATTCACTTCTGCTCTATCTTTTATCCTCTTTTGTTTTAGAAAGTCTGTAGAAACAGGATTTGTAATTTTTTTCTCCTCGTTTATTTTCTTGTGTACCAAACCATTTGCAGTTTTGGAGAGAAAGTTTTGTTCTTGTTTCTTATATTGTTGAAACTGGCTCTCGTGGCATGCTTTTTTTTTTCCTTGTTCACAATTTGAGTGTATAAAATTTGGTTTGAACTTCCTGAGGCCTGATACTGACCTAATATTTGCCAATAGTGTACGATGTCACACGACGGGAGACATTTACGAACTTGTTGAATATATGGGCAAAGGAAGTGGAGCTGTATTTAACCAACCATGAGTGCATAAAAATTCTAGTTGGAAATAAAGTTGACCGGGTAAGTTGTATGATCCTGCTATTTGATTCCACGTTCATCCTTTATCGACATTCTGTTGTCATGCCGTGATACTTTGCTTGCATTGGACAATATCGATAATCTTCAAATCTGAAACTCTTCATTCTAAATTACATTACATTGGGAGAGAATTTTTAAAAGTGCGGTGTCATGTCCTTGGGATCTTTAATATTGACAGGGTAGTGAAAGAGCGGTATCGACAGAAGAAGGGATGGCAGTTGCAGCGGAGCATAAAAGTATGTTTCTCGAGTGTAGTGCTAAAACTCGAGAAAATGTCGATAGATGCTTTAGAGATCTCTGTTTGAAGGTAACATTCTATCGCCAAGACGCTCGCCATTTTTATTTGAATCATCTTCTAATCTTCATTATTATGTTATAGTGGGACTGATAACAGCTAACAGTAGCCACTGCACACCATTTCATAAACATAAATGTTGTCTAGGAGTGTAGTCTTTCAGAACAATAATTCATACTCTCCTAACTTACCAAATGAAATTTTTGGTTTAATACATTGTTTAGTCATTTATTACCTAAACTGAATGCAAAATTTCCCTGAAACTCAAAAGCAAGCCAAAAATGATAAAGAACTTGTCTAAGTGACAGTTCCGTACTTCCACAAAGTAATGATAGCCTGTTGAGGCGTTTGCACTTAGCATCGAGTTGAGAGTAGCTCTAGAAGTGGCAGAAAACTTCCATGAAACCCGACACTCGACAGTAAATGTATTTCATCTCATGGCTTTTTTGGCATGGTCTAAATTGGTTCTAACTCTATTCCAGATACTGAAAGTTCCAAGTCTACTGGAAAATGGATCAGTCGCCATGAAGCAGCAAATTTTGGACAAAACACGAGCACGCAAAGCAGCGGAAGATGGAGGTTGTTGCCAC

mRNA sequence

ATGATGGGTTCTTCTTCAAAAGGAAGATGGTTTAGCTACGATTACTCTTTCAAGATTTTGTTGATTGGGGACTCTGGTGTGGGAAAAAGCAGTATTCTCCTCAGTTACATCTCCAATTTTGTTCATGATCTCTCTCCCACCATCGGTGTGGATTTCAAGATCAAGACTGTAACAGTTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGCTGGACAAGAGCGGTTCGGAATGTTGACAAGCTCTTACTATAGAGGTGCACATGGAATCATTCTAGTGTACGATGTCACACGACGGGAGACATTTACGAACTTGTTGAATATATGGGCAAAGGAAGTGGAGCTGTATTTAACCAACCATGAGTGCATAAAAATTCTAGTTGGAAATAAAGTTGACCGGGGTAGTGAAAGAGCGGTATCGACAGAAGAAGGGATGGCAGTTGCAGCGGAGCATAAAAGTATGTTTCTCGAGTGTAGTGCTAAAACTCGAGAAAATGTCGATAGATGCTTTAGAGATCTCTGTTTGAAGATACTGAAAGTTCCAAGTCTACTGGAAAATGGATCAGTCGCCATGAAGCAGCAAATTTTGGACAAAACACGAGCACGCAAAGCAGCGGAAGATGGAGGTTGTTGCCAC

Coding sequence (CDS)

ATGATGGGTTCTTCTTCAAAAGGAAGATGGTTTAGCTACGATTACTCTTTCAAGATTTTGTTGATTGGGGACTCTGGTGTGGGAAAAAGCAGTATTCTCCTCAGTTACATCTCCAATTTTGTTCATGATCTCTCTCCCACCATCGGTGTGGATTTCAAGATCAAGACTGTAACAGTTGGTGGAAAAAGATTGAAGCTAACAATTTGGGACACAGCTGGACAAGAGCGGTTCGGAATGTTGACAAGCTCTTACTATAGAGGTGCACATGGAATCATTCTAGTGTACGATGTCACACGACGGGAGACATTTACGAACTTGTTGAATATATGGGCAAAGGAAGTGGAGCTGTATTTAACCAACCATGAGTGCATAAAAATTCTAGTTGGAAATAAAGTTGACCGGGGTAGTGAAAGAGCGGTATCGACAGAAGAAGGGATGGCAGTTGCAGCGGAGCATAAAAGTATGTTTCTCGAGTGTAGTGCTAAAACTCGAGAAAATGTCGATAGATGCTTTAGAGATCTCTGTTTGAAGATACTGAAAGTTCCAAGTCTACTGGAAAATGGATCAGTCGCCATGAAGCAGCAAATTTTGGACAAAACACGAGCACGCAAAGCAGCGGAAGATGGAGGTTGTTGCCAC

Protein sequence

MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGGKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKVPSLLENGSVAMKQQILDKTRARKAAEDGGCCH

Homology

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BLAST of MS010101 vs. NCBI nr
Match: XP_022133444.1 (ras-related protein RABC2a-like [Momordica charantia])

HSP 1 Score: 428.7 bits (1101), Expect = 2.9e-116
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG
Sbjct: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
           HECIKILVGNKVDRGSER VSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK
Sbjct: 121 HECIKILVGNKVDRGSERVVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCCH 214
           VPSLLENGSVAMKQQILDKTRARKAAEDGGCCH
Sbjct: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCCH 213

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BLAST of MS010101 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 380.6 bits (976), Expect = 9.1e-102
Identity = 188/213 (88.26%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSKGR  SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
            ECIKILVGNKVDRGSERAV+TEEGM VA EHKS+FLECSA+TRENVDRCFR+L  KIL+
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCCH 214
           VPSLLENGSV +KQ+ILD TRARK A D GCCH
Sbjct: 181 VPSLLENGSVVVKQKILDNTRARKEANDRGCCH 213

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BLAST of MS010101 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 188/212 (88.68%), Postives = 200/212 (94.34%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
           HECIKILVGNKVDRGSERAVSTEEGMAVA EH+S+FLECSA+TRENVDRCF++L  KIL+
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           VPSLLENGSV +KQ+ILDKTRARK A DGGCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCC 212

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BLAST of MS010101 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 2.6e-101
Identity = 189/215 (87.91%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSKGR  SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+NIWAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
            ECIKILVGNKVDRGSERAV+TEEGM +A EHKS+FLECSA+TRENVDRCFR+L  KIL+
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAE--DGGCCH 214
           VPSLLENGS+ +KQ+ILDKTRA K  E  D GCCH
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of MS010101 vs. NCBI nr
Match: XP_022990456.1 (ras-related protein RABC2a-like [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.0e-100
Identity = 187/212 (88.21%), Postives = 198/212 (93.40%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+ +WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
           HECIKILVGNKVDRGSERAVSTEEGMAVA EH+S+FLECSA+TRENVDRCF++L  KIL+
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           VPSLLENGSV +KQ+ILDKTRA K A DGGCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRALKEANDGGCC 212

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BLAST of MS010101 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.5e-78
Identity = 147/211 (69.67%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 2   MGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGG 61
           MGSSS      YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSSGQS--GYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNH 121
           KRLKLTIWDTAGQERF  LTSSYYRGA GIILVYDVTRRETFTNL+++W KE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKV 181
           EC+++LVGNKVDR SER VS EEG+A+A E   MFLECSA+TR+NV++CF +L LKI++V
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           PSLLE GS A+K+ IL +    +     GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of MS010101 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.7e-72
Identity = 142/211 (67.30%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 2   MGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGG 61
           MGSSS      YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSSGQS--GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNH 121
           KRLKLTIWDTAGQE+F  LTSSY+RG+ GIILVYDVT+RETF NL +IWAKE+ELY TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKV 181
           +CIK+LVGNKVDR SER VS EEGMA+A +   +F ECSA+TRENV+ CF +L LKI++V
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           PSLLE GS ++K+      +    A  G CC
Sbjct: 181 PSLLEEGSSSVKR------KPDYRAHQGRCC 203

[Close]

BLAST of MS010101 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.3e-70
Identity = 134/211 (63.51%), Postives = 162/211 (76.78%), Query Frame = 0


Query: 2   MGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSGQP--EFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNH 121
           K+LKL IWDTAGQERF  LTSSYYRGA GII+VYDVTRR+TFTNL +IWAKE++LY TN 
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKV 181
           +CIK+LVGNKVD+ SERAVS +EG+  A E+  +FLECSAKTR NV++CF +L LKIL+ 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           PSL   GS   K+ I  +  A+  +     C
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

[Close]

BLAST of MS010101 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 101/180 (56.11%), Postives = 125/180 (69.44%), Query Frame = 0


Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKTVTVGGKRLKLTIWD 71
           S+DY+FK+LL+GDSGVGKS IL  + S  F    + TIGVDFK+K +T  GKR KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 72  TAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNHECIKILVGN 131
           TAGQERF  LTSSYYRGA GII VYDVTRR+TF +L   W +E ++Y T    IK++V N
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVAN 124

Query: 132 KVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKVPSLLENGSV 191
           KVD  ++R VS+EEG   A  H  +F+E SA+    V + F +L LKIL  P LLE  +V
Sbjct: 125 KVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAV 184

[Close]

BLAST of MS010101 vs. ExPASy Swiss-Prot
Match: Q6DHC1 (Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.6e-48
Identity = 101/197 (51.27%), Postives = 132/197 (67.01%), Query Frame = 0


Query: 16  SFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKTVTVGGKRLKLTIWDTAGQ 75
           + KIL+IG+SGVGKSS+LL +  + F  +L+ TIGVDFK+KT+ + G R KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67

Query: 76  ERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNHECIKILVGNKVDR 135
           ERF  LT SYYRGA G+ILVYDVT+R+TFT L N W  E+E Y T ++ +K+LVGNK+D+
Sbjct: 68  ERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDK 127

Query: 136 GSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKVPSLLENGSVAMKQ 195
              R V   EG+  A +H  +F+E SAKTR+ V   F +L  KIL+ P L E+       
Sbjct: 128 -DNREVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGV 187

Query: 196 QILDKTRARKAAEDGGC 212
           Q+ D    R+ A  G C
Sbjct: 188 QLSDNEPQRQGACGGYC 202

[Close]

BLAST of MS010101 vs. ExPASy TrEMBL
Match: A0A6J1BW00 (ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 1.4e-116
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG
Sbjct: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
           HECIKILVGNKVDRGSER VSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK
Sbjct: 121 HECIKILVGNKVDRGSERVVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCCH 214
           VPSLLENGSVAMKQQILDKTRARKAAEDGGCCH
Sbjct: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCCH 213

[Close]

BLAST of MS010101 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.8e-102
Identity = 188/212 (88.68%), Postives = 200/212 (94.34%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+++WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMDVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
           HECIKILVGNKVDRGSERAVSTEEGMAVA EH+S+FLECSA+TRENVDRCF++L  KIL+
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           VPSLLENGSV +KQ+ILDKTRARK A DGGCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRARKEANDGGCC 212

[Close]

BLAST of MS010101 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 189/215 (87.91%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSKGR  SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+NIWAKEVELYLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINIWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
            ECIKILVGNKVDRGSERAV+TEEGM +A EHKS+FLECSA+TRENVDRCFR+L  KIL+
Sbjct: 121 RECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRELSSKILE 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAE--DGGCCH 214
           VPSLLENGS+ +KQ+ILDKTRA K  E  D GCCH
Sbjct: 181 VPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of MS010101 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.9e-101
Identity = 187/212 (88.21%), Postives = 198/212 (93.40%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSK R  SYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+ +WAKEVE+YLTN
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLMGVWAKEVEMYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
           HECIKILVGNKVDRGSERAVSTEEGMAVA EH+S+FLECSA+TRENVDRCF++L  KIL+
Sbjct: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKELSSKILE 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           VPSLLENGSV +KQ+ILDKTRA K A DGGCC
Sbjct: 181 VPSLLENGSVVVKQKILDKTRALKEANDGGCC 212

[Close]

BLAST of MS010101 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.2e-100
Identity = 184/215 (85.58%), Postives = 200/215 (93.02%), Query Frame = 0


Query: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60
           MMGSSSKGR  SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTN 120
           GK+LKLTIWDTAGQERFG LTSSYYRGAHGIILVYDVTRRETFTNL+N+WAKEVELYLTN
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTN 120

Query: 121 HECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILK 180
            ECIKILVGNKVDRGS+RAV+TEEGM VA +HKS+FLECSA+TRENVDRCF++L  K+++
Sbjct: 121 RECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMME 180

Query: 181 VPSLLENGSVAMKQQILDKTRARKAAE--DGGCCH 214
           VPSLLENGSV +KQ+ILDKT+ARK  E  D GCCH
Sbjct: 181 VPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of MS010101 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 293.9 bits (751), Expect = 1.0e-79
Identity = 147/211 (69.67%), Postives = 173/211 (81.99%), Query Frame = 0


Query: 2   MGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGG 61
           MGSSS      YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSSGQS--GYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNH 121
           KRLKLTIWDTAGQERF  LTSSYYRGA GIILVYDVTRRETFTNL+++W KE+ELY TN 
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKV 181
           EC+++LVGNKVDR SER VS EEG+A+A E   MFLECSA+TR+NV++CF +L LKI++V
Sbjct: 121 ECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEV 180

Query: 182 PSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           PSLLE GS A+K+ IL +    +     GCC
Sbjct: 181 PSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of MS010101 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 273.1 bits (697), Expect = 1.9e-73
Identity = 142/211 (67.30%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 2   MGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGG 61
           MGSSS      YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSSGQS--GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNH 121
           KRLKLTIWDTAGQE+F  LTSSY+RG+ GIILVYDVT+RETF NL +IWAKE+ELY TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKV 181
           +CIK+LVGNKVDR SER VS EEGMA+A +   +F ECSA+TRENV+ CF +L LKI++V
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           PSLLE GS ++K+      +    A  G CC
Sbjct: 181 PSLLEEGSSSVKR------KPDYRAHQGRCC 203

[Close]

BLAST of MS010101 vs. TAIR 10
Match: AT3G09910.2 (RAB GTPase homolog C2B )

HSP 1 Score: 273.1 bits (697), Expect = 1.9e-73
Identity = 142/211 (67.30%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 2   MGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGG 61
           MGSSS      YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSSGQS--GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNH 121
           KRLKLTIWDTAGQE+F  LTSSY+RG+ GIILVYDVT+RETF NL +IWAKE+ELY TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKV 181
           +CIK+LVGNKVDR SER VS EEGMA+A +   +F ECSA+TRENV+ CF +L LKI++V
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           PSLLE GS ++K+      +    A  G CC
Sbjct: 181 PSLLEEGSSSVKR------KPDYRAHQGRCC 203

[Close]

BLAST of MS010101 vs. TAIR 10
Match: AT3G09910.3 (RAB GTPase homolog C2B )

HSP 1 Score: 273.1 bits (697), Expect = 1.9e-73
Identity = 142/211 (67.30%), Postives = 167/211 (79.15%), Query Frame = 0


Query: 2   MGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGG 61
           MGSSS      YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSSGQS--GYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNH 121
           KRLKLTIWDTAGQE+F  LTSSY+RG+ GIILVYDVT+RETF NL +IWAKE+ELY TNH
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNH 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKV 181
           +CIK+LVGNKVDR SER VS EEGMA+A +   +F ECSA+TRENV+ CF +L LKI++V
Sbjct: 121 DCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEV 180

Query: 182 PSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           PSLLE GS ++K+      +    A  G CC
Sbjct: 181 PSLLEEGSSSVKR------KPDYRAHQGRCC 203

[Close]

BLAST of MS010101 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 265.0 bits (676), Expect = 5.2e-71
Identity = 134/211 (63.51%), Postives = 162/211 (76.78%), Query Frame = 0


Query: 2   MGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVGG 61
           MGSSS      +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSSGQP--EFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGMLTSSYYRGAHGIILVYDVTRRETFTNLLNIWAKEVELYLTNH 121
           K+LKL IWDTAGQERF  LTSSYYRGA GII+VYDVTRR+TFTNL +IWAKE++LY TN 
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQ 120

Query: 122 ECIKILVGNKVDRGSERAVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRDLCLKILKV 181
           +CIK+LVGNKVD+ SERAVS +EG+  A E+  +FLECSAKTR NV++CF +L LKIL+ 
Sbjct: 121 DCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILET 180

Query: 182 PSLLENGSVAMKQQILDKTRARKAAEDGGCC 213
           PSL   GS   K+ I  +  A+  +     C
Sbjct: 181 PSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

The following BLAST results are available for this feature:

BLAST of MS010101 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133444.1	2.9e-116	99.53	ras-related protein RABC2a-like [Momordica charantia]	[more]
XP_038885704.1	9.1e-102	88.26	ras-related protein RABC2a-like [Benincasa hispida]	[more]
XP_022952871.1	1.2e-101	88.68	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]
XP_008456546.1	2.6e-101	87.91	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
XP_022990456.1	1.0e-100	88.21	ras-related protein RABC2a-like [Cucurbita maxima]	[more]

BLAST of MS010101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	1.5e-78	69.67	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	2.7e-72	67.30	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	7.3e-70	63.51	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
P36862	1.2e-48	56.11	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q6DHC1	4.6e-48	51.27	Ras-related protein Rab-18-B OS=Danio rerio OX=7955 GN=rab18b PE=2 SV=1	[more]

BLAST of MS010101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BW00	1.4e-116	99.53	ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 P...	[more]
A0A6J1GLE8	5.8e-102	88.68	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE...	[more]
A0A1S3C3K9	1.3e-101	87.91	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
A0A6J1JMZ9	4.9e-101	88.21	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4...	[more]
A0A0A0LN27	9.2e-100	85.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]

BLAST of MS010101 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03530.1	1.0e-79	69.67	RAB GTPase homolog C2A	[more]
AT3G09910.1	1.9e-73	67.30	RAB GTPase homolog C2B	[more]
AT3G09910.2	1.9e-73	67.30	RAB GTPase homolog C2B	[more]
AT3G09910.3	1.9e-73	67.30	RAB GTPase homolog C2B	[more]
AT1G43890.1	5.2e-71	63.51	RAB GTPASE HOMOLOG B18	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 39..55 score: 34.91 coord: 17..38 score: 47.48 coord: 156..178 score: 39.36 coord: 121..134 score: 42.19 coord: 57..79 score: 50.03
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 22..211 e-value: 1.5E-4 score: 16.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 14..181 e-value: 1.2E-29 score: 114.5
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 17..181 e-value: 2.3E-87 score: 306.2
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 3..213
None	No IPR available	PANTHER	PTHR24073:SF643	SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 3..213
None	No IPR available	PROSITE	PS51419	RAB	coord: 12..212 score: 31.05941
None	No IPR available	PROSITE	PS51420	RHO	coord: 10..179 score: 9.164656
None	No IPR available	CDD	cd01863	Rab18	coord: 17..178 e-value: 1.65658E-89 score: 258.395
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 19..181 e-value: 2.8E-12 score: 37.4
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 18..179 e-value: 2.9E-53 score: 179.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..213 score: 15.706455
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 11..212 e-value: 2.1E-61 score: 208.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 12..187
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..171 e-value: 3.6E-27 score: 93.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS010101.1	MS010101.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding