MS009823 (gene) Bitter gourd (TR) v1

Overview


Name	MS009823
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Plant/MOJ10-14 protein
Location	scaffold173: 528746 .. 531287 (+)
RNA-Seq Expression	MS009823
Synteny	MS009823

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGTCATCTTCATCGTTCGTGGTGCGATTTCCACCTCTCATTCTCCGGCCATGCTCTCTAGGGCTCAGTTGTTCCATCTCTTCTCTCGCTTCTCCGCCCTCACCTCCCTCTCTGGTTCTCATATTACTATCCCCTTCCTTTCTTTCTCCCAATTTTCCCCCAATTGACCGTTATTTCTGCTCCCATTCTTGCAGATGTGAAGAAGAGGATTGCGGCCGCCGTTAGGGATGATAAACAGGTGAATCTTTTTCTGACTCCTTTACTACTTCAATGGTCTTTCCTTGAGATGTTTTGAACAGAATCAAATGGGGTATGCCGTATGTATGATTCTTTTTCCCTTGGAATCTGTTGTGTGGATAGGTTTCACTCATCAAGCTGTATAAAAAGTCTGCAAAATCGGGTTTTTTTTGTTTTGTTTTACTTTTTTTTTTATATGGGTGTGTTTGGGCACCTCTAACATGCTCGACTAATTTCACGGTACAACTTCTAATACTATAACATTTGATTGTTTGTTTTGCTGACATTGTTGGTCAAGAAATCTGGTTGGATGTTCAAATCCTTCACCCTTCTGTCGCGAAACAAAAACATTTGATGGTCAGAAAACTTGGCTTGTTTAGTATCTAATTGGGTTTGTGAGAAATGTCGTTTTAACCTCCCTACCAACTCCATCAGCTACTTTGATTTTGTTCTAATGTCGAGCTAAAACGGTGGTCTTATTGTAGGTTGGTCATCTGTTCAATGTAGAATTACTTCTCTTGTTTGGTTTAGAATTTCCTGTCGCGTTAGCATTTTCACAATGTGCTAGGCCCCAACGAGTTTCAAGAGGGAATAACTATATCGCTTTTCCCCCTCCCTGAACAAATAAGAACCAAGAGGTGTGGGTCACAAGTAGGACATAAGCCACTAAGGTCGAAAAACAAGTCGTTGATGTCATAAGTTAAACCGGTGGGTGAGGCGACGCAAACCAGAAAGATTTTATTATTTAGTTCTGGGTTTTATGAACCACAAGAGTTTATTAGTAAAGTAGGGTGTTTCTGATTGAACTGTGGAGCAGAAAAGTAATTAATCTGTAGATGACAAGTTGTTTGGTACCTTATTTATTACTGTGTTTGTTCTTATTCTTGAAGTTTTTTTGGTTGCATTCTGCAGGAAGCTGTTGCCGTGACAACTGCAATACAAGAAGAGATTTTTTCTGAAATGGGGGTTGGTCAGTCTTTTCTAGTACATTGCTGTTTTGTTAATTTTGTCTATAATTCATTTGTCATTTTCCTTGAAACTATGAATAATTTTTTCTTCTTCACAATGTCTGTTGGGCTTATACTTTCCCATTTGAATATGACAACTGCTTATCTGGTAGAGGTTCAATATTCCTTTGTTGTACGTAAATCTTGAACATGTTTGCTAACTATTTGGTTTTTCGTTTTCTGTTCAACAATGCTTGTTCATTGGCAAGTTTATTCTTGAAAAAGATTAGGACATTGGAGTTTTAAAAGTCTAAAACAAGATCGTTCTCCAACGGAGCCTTTGACACAATGATTTTGATTGAAACAAATCTAAAACTTCCTCTACGGGAGTGTTGTGCTATTACCTTGATTGCTCATGCCATATTTCATCATCCAAATAGTTAATTATTTATGCTTATGTTGATCTTTGTTTCTTCTACAGATGCACAATTTGGTATATCGTGCCTAGGGAAAGTGAATTCATTTTATGAGAACGATCAGGAGTTGATGGTTCATTTCTACAAGTTCATCGCGATGTAAGTTGTCTGTCTATTTTTGATAATACCTCTCCGGCCTCCTAAAATGATAATAAACCATAGGTGCACAAAGTTGAAGACTGTCTTTAAACTCATCATATGAGGTTAAAATTTGAAGTTATAACTCATCTTTACAAGAAAATGTATTTTCGTTTGCCCGTTTTGTATTCGTCCTTTTGATTTGTTCCGAACATGTTTTTTTTATATATTCTTGTTCTTCTCCTAGAACTCTAGCTCATGAATTAAATGAAATTATCCTCTGTATCTATCATTTAAATGATAGGGAAGAGATGGCATGTGATGAAGCAGAGCTTGAACCAGATGAGTTTGCTGAAAAAATGCATAGTCAACAACAACTACATGAAAAGGTGAGGAGGCAACTTTTTCCCCATACTTATTGAAGTGAATTCTTCTGAATACGGATTTATGTGCTCGAAAATTTAATGCACGTCGTCTACAGCAACTGGAGATGCTGAAACACATGCGCAAACTTCACTCGGACGATCAATGCGCCATTCTCGAGAAGGTTTGCAGATTTCTCTATTCCCAGGGGGCTCTTTGCTTACTATGAGCGTAATGAGAACTAAACAACGAACAATATGTAATCCGATTAGGTTGCTTTTCAACTTATTGAACATTTGTGTATTTATCGATCATTGTATCGGTTTGTGTTCATGCAGTTACACCAGCAGCTGGAGAGTGCTGAGTTTGATGGTATGGCATCAATTTTATCATCAGAAGAGATACAAGAGATAGTTGAAAGGAGGGGTGTGTCCTCTATT

mRNA sequence

AGCGTCATCTTCATCGTTCGTGGTGCGATTTCCACCTCTCATTCTCCGGCCATGCTCTCTAGGGCTCAGTTGTTCCATCTCTTCTCTCGCTTCTCCGCCCTCACCTCCCTCTCTGATGTGAAGAAGAGGATTGCGGCCGCCGTTAGGGATGATAAACAGGAAGCTGTTGCCGTGACAACTGCAATACAAGAAGAGATTTTTTCTGAAATGGGGGTTGATGCACAATTTGGTATATCGTGCCTAGGGAAAGTGAATTCATTTTATGAGAACGATCAGGAGTTGATGGTTCATTTCTACAAGTTCATCGCGATGGAAGAGATGGCATGTGATGAAGCAGAGCTTGAACCAGATGAGTTTGCTGAAAAAATGCATAGTCAACAACAACTACATGAAAAGCAACTGGAGATGCTGAAACACATGCGCAAACTTCACTCGGACGATCAATGCGCCATTCTCGAGAAGTTACACCAGCAGCTGGAGAGTGCTGAGTTTGATGGTATGGCATCAATTTTATCATCAGAAGAGATACAAGAGATAGTTGAAAGGAGGGGTGTGTCCTCTATT

Coding sequence (CDS)

AGCGTCATCTTCATCGTTCGTGGTGCGATTTCCACCTCTCATTCTCCGGCCATGCTCTCTAGGGCTCAGTTGTTCCATCTCTTCTCTCGCTTCTCCGCCCTCACCTCCCTCTCTGATGTGAAGAAGAGGATTGCGGCCGCCGTTAGGGATGATAAACAGGAAGCTGTTGCCGTGACAACTGCAATACAAGAAGAGATTTTTTCTGAAATGGGGGTTGATGCACAATTTGGTATATCGTGCCTAGGGAAAGTGAATTCATTTTATGAGAACGATCAGGAGTTGATGGTTCATTTCTACAAGTTCATCGCGATGGAAGAGATGGCATGTGATGAAGCAGAGCTTGAACCAGATGAGTTTGCTGAAAAAATGCATAGTCAACAACAACTACATGAAAAGCAACTGGAGATGCTGAAACACATGCGCAAACTTCACTCGGACGATCAATGCGCCATTCTCGAGAAGTTACACCAGCAGCTGGAGAGTGCTGAGTTTGATGGTATGGCATCAATTTTATCATCAGAAGAGATACAAGAGATAGTTGAAAGGAGGGGTGTGTCCTCTATT

Protein sequence

SVIFIVRGAISTSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGVSSI

Homology

[Close]

BLAST of MS009823 vs. NCBI nr
Match: XP_022156519.1 (uncharacterized protein LOC111023401 [Momordica charantia])

HSP 1 Score: 318.5 bits (815), Expect = 3.7e-83
Identity = 169/171 (98.83%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 18  MLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQFG 77
           MLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQFG
Sbjct: 1   MLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQFG 60

Query: 78  ISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLEML 137
           +SCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLEML
Sbjct: 61  MSCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLEML 120

Query: 138 KHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGVSSI 189
           KHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEE+QEIVERRGVSSI
Sbjct: 121 KHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEMQEIVERRGVSSI 171

[Close]

BLAST of MS009823 vs. NCBI nr
Match: XP_038876177.1 (uncharacterized protein LOC120068461 [Benincasa hispida])

HSP 1 Score: 282.0 bits (720), Expect = 3.9e-72
Identity = 148/171 (86.55%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 16  PAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQ 75
           P MLSR QLFHLF+RFS LTSLSDVKKRIA AVRDDKQEAVAVTTAIQEEIFSEMG+DA 
Sbjct: 17  PLMLSRDQLFHLFNRFSLLTSLSDVKKRIAHAVRDDKQEAVAVTTAIQEEIFSEMGIDAG 76

Query: 76  FGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLE 135
           FGISCLGKV+SFYEND ELMVHFYKF+A+EEMACDEAELEPDEFAEKMH+QQ LHEKQLE
Sbjct: 77  FGISCLGKVSSFYENDHELMVHFYKFVAVEEMACDEAELEPDEFAEKMHNQQLLHEKQLE 136

Query: 136 MLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGVS 187
           MLKHMRKLHSDDQ  ILEKLHQQLESAEFD  ASI+SSE+IQEIV+R+ +S
Sbjct: 137 MLKHMRKLHSDDQSLILEKLHQQLESAEFDSSASIMSSEDIQEIVQRKSLS 187

[Close]

BLAST of MS009823 vs. NCBI nr
Match: XP_008450107.1 (PREDICTED: uncharacterized protein LOC103491795 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-69
Identity = 145/183 (79.23%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 6   VRGAISTSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEE 65
           +   I+ + +P+MLSR QLFHLFSRFS LTSL DVKKRIA A RDD QEAVAVTTAIQEE
Sbjct: 5   ISSGIARTPTPSMLSRDQLFHLFSRFSQLTSLPDVKKRIADAFRDDNQEAVAVTTAIQEE 64

Query: 66  IFSEMGVDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHS 125
           IFSEMGVDA FGISCLGK++S+YEND ELMVHFYKF+AMEEMACDEAELEPDEFAEKM++
Sbjct: 65  IFSEMGVDAGFGISCLGKLSSYYENDLELMVHFYKFVAMEEMACDEAELEPDEFAEKMNN 124

Query: 126 QQQLHEKQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGV 185
           QQ+LH+KQLEML+HMRKL+SDDQ AILEKLHQQLES EFD  ASILSSEEIQEIV+R   
Sbjct: 125 QQKLHDKQLEMLQHMRKLNSDDQSAILEKLHQQLESVEFDSSASILSSEEIQEIVQRTSP 184

Query: 186 SSI 189
           +S+
Sbjct: 185 ASV 187

[Close]

BLAST of MS009823 vs. NCBI nr
Match: XP_004145662.1 (uncharacterized protein LOC101214890 [Cucumis sativus] >KAE8650775.1 hypothetical protein Csa_017496 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 5.3e-69
Identity = 147/184 (79.89%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 5   IVRGAISTSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQE 64
           I  G   T    +MLSR QLFHLF+RFS LTSLSDVKKRIA AVRDD QEAVAVTTAIQE
Sbjct: 5   ISSGIPQTLPFSSMLSRDQLFHLFNRFSQLTSLSDVKKRIADAVRDDNQEAVAVTTAIQE 64

Query: 65  EIFSEMGVDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMH 124
           EIFSEMGVDA FGISCLGKV+S+YEND ELMVHFYKF+AMEEMACDEAELEPD+FAEKM+
Sbjct: 65  EIFSEMGVDAGFGISCLGKVSSYYENDHELMVHFYKFVAMEEMACDEAELEPDDFAEKMN 124

Query: 125 SQQQLHEKQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRG 184
           +QQ+LH+KQLEML+HMRKLHS DQ AILEKLHQQLES EFD  ASILSSEEIQEIV+R  
Sbjct: 125 NQQKLHDKQLEMLQHMRKLHSYDQSAILEKLHQQLESVEFDSSASILSSEEIQEIVQRTS 184

Query: 185 VSSI 189
            +S+
Sbjct: 185 PTSV 188

[Close]

BLAST of MS009823 vs. NCBI nr
Match: TYK05319.1 (plant/MOJ10-14 protein [Cucumis melo var. makuwa])

HSP 1 Score: 268.5 bits (685), Expect = 4.4e-68
Identity = 145/183 (79.23%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 6   VRGAISTSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEE 65
           +   I+ + SP+MLSR QLFHLFSRFS LTSL DVKKRIA A RDD QEAVAVTTAIQ E
Sbjct: 5   ISSGIARTPSPSMLSRDQLFHLFSRFSQLTSLPDVKKRIADAFRDDNQEAVAVTTAIQ-E 64

Query: 66  IFSEMGVDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHS 125
           IFSEMGVDA FGISCLGK++S+YEND ELMVHFYKF+AMEEMACDEAELEPDEFAEKM++
Sbjct: 65  IFSEMGVDAGFGISCLGKLSSYYENDLELMVHFYKFVAMEEMACDEAELEPDEFAEKMNN 124

Query: 126 QQQLHEKQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGV 185
           QQ+LH+KQLEML+HMRKL+SDDQ AILEKLHQQLES EFD  ASILSSEEIQEIV+R   
Sbjct: 125 QQKLHDKQLEMLQHMRKLNSDDQSAILEKLHQQLESVEFDSSASILSSEEIQEIVQRTSP 184

Query: 186 SSI 189
           +S+
Sbjct: 185 ASV 186

[Close]

BLAST of MS009823 vs. ExPASy TrEMBL
Match: A0A6J1DTQ6 (uncharacterized protein LOC111023401 OS=Momordica charantia OX=3673 GN=LOC111023401 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 169/171 (98.83%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 18  MLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQFG 77
           MLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQFG
Sbjct: 1   MLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMGVDAQFG 60

Query: 78  ISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLEML 137
           +SCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLEML
Sbjct: 61  MSCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHEKQLEML 120

Query: 138 KHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGVSSI 189
           KHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEE+QEIVERRGVSSI
Sbjct: 121 KHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEMQEIVERRGVSSI 171

[Close]

BLAST of MS009823 vs. ExPASy TrEMBL
Match: A0A1S3BNJ5 (uncharacterized protein LOC103491795 OS=Cucumis melo OX=3656 GN=LOC103491795 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.1e-70
Identity = 145/183 (79.23%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 6   VRGAISTSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEE 65
           +   I+ + +P+MLSR QLFHLFSRFS LTSL DVKKRIA A RDD QEAVAVTTAIQEE
Sbjct: 5   ISSGIARTPTPSMLSRDQLFHLFSRFSQLTSLPDVKKRIADAFRDDNQEAVAVTTAIQEE 64

Query: 66  IFSEMGVDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHS 125
           IFSEMGVDA FGISCLGK++S+YEND ELMVHFYKF+AMEEMACDEAELEPDEFAEKM++
Sbjct: 65  IFSEMGVDAGFGISCLGKLSSYYENDLELMVHFYKFVAMEEMACDEAELEPDEFAEKMNN 124

Query: 126 QQQLHEKQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGV 185
           QQ+LH+KQLEML+HMRKL+SDDQ AILEKLHQQLES EFD  ASILSSEEIQEIV+R   
Sbjct: 125 QQKLHDKQLEMLQHMRKLNSDDQSAILEKLHQQLESVEFDSSASILSSEEIQEIVQRTSP 184

Query: 186 SSI 189
           +S+
Sbjct: 185 ASV 187

[Close]

BLAST of MS009823 vs. ExPASy TrEMBL
Match: A0A0A0LS98 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097730 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.5e-69
Identity = 147/184 (79.89%), Postives = 161/184 (87.50%), Query Frame = 0


Query: 5   IVRGAISTSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQE 64
           I  G   T    +MLSR QLFHLF+RFS LTSLSDVKKRIA AVRDD QEAVAVTTAIQE
Sbjct: 5   ISSGIPQTLPFSSMLSRDQLFHLFNRFSQLTSLSDVKKRIADAVRDDNQEAVAVTTAIQE 64

Query: 65  EIFSEMGVDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMH 124
           EIFSEMGVDA FGISCLGKV+S+YEND ELMVHFYKF+AMEEMACDEAELEPD+FAEKM+
Sbjct: 65  EIFSEMGVDAGFGISCLGKVSSYYENDHELMVHFYKFVAMEEMACDEAELEPDDFAEKMN 124

Query: 125 SQQQLHEKQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRG 184
           +QQ+LH+KQLEML+HMRKLHS DQ AILEKLHQQLES EFD  ASILSSEEIQEIV+R  
Sbjct: 125 NQQKLHDKQLEMLQHMRKLHSYDQSAILEKLHQQLESVEFDSSASILSSEEIQEIVQRTS 184

Query: 185 VSSI 189
            +S+
Sbjct: 185 PTSV 188

[Close]

BLAST of MS009823 vs. ExPASy TrEMBL
Match: A0A5D3C4L8 (Plant/MOJ10-14 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001440 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.2e-68
Identity = 145/183 (79.23%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 6   VRGAISTSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEE 65
           +   I+ + SP+MLSR QLFHLFSRFS LTSL DVKKRIA A RDD QEAVAVTTAIQ E
Sbjct: 5   ISSGIARTPSPSMLSRDQLFHLFSRFSQLTSLPDVKKRIADAFRDDNQEAVAVTTAIQ-E 64

Query: 66  IFSEMGVDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHS 125
           IFSEMGVDA FGISCLGK++S+YEND ELMVHFYKF+AMEEMACDEAELEPDEFAEKM++
Sbjct: 65  IFSEMGVDAGFGISCLGKLSSYYENDLELMVHFYKFVAMEEMACDEAELEPDEFAEKMNN 124

Query: 126 QQQLHEKQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGV 185
           QQ+LH+KQLEML+HMRKL+SDDQ AILEKLHQQLES EFD  ASILSSEEIQEIV+R   
Sbjct: 125 QQKLHDKQLEMLQHMRKLNSDDQSAILEKLHQQLESVEFDSSASILSSEEIQEIVQRTSP 184

Query: 186 SSI 189
           +S+
Sbjct: 185 ASV 186

[Close]

BLAST of MS009823 vs. ExPASy TrEMBL
Match: A0A6J1EJ73 (uncharacterized protein LOC111435086 OS=Cucurbita moschata OX=3662 GN=LOC111435086 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 9.1e-67
Identity = 139/176 (78.98%), Postives = 157/176 (89.20%), Query Frame = 0


Query: 12  TSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEMG 71
           T   P+MLSR QLFHLF+RFS + SLSDVKKRIA AVRDD QEAVAVTTAIQEEIFSEMG
Sbjct: 6   TPSIPSMLSRDQLFHLFNRFSVIVSLSDVKKRIADAVRDDNQEAVAVTTAIQEEIFSEMG 65

Query: 72  VDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLHE 131
           +D++FGISCLGKVNSFYEND ELMV FYKF+A EEMACDEAELEP EFAEKM+++ QLH+
Sbjct: 66  IDSRFGISCLGKVNSFYENDLELMVRFYKFVAAEEMACDEAELEPYEFAEKMNNEHQLHK 125

Query: 132 KQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERRGVSS 188
            QLEMLKHMR L+SDDQ AIL+KLH+QLESAEFD +ASI+S EEIQEIV+ +GVSS
Sbjct: 126 MQLEMLKHMRTLNSDDQSAILDKLHEQLESAEFDSLASIMSLEEIQEIVQTKGVSS 181

[Close]

BLAST of MS009823 vs. TAIR 10
Match: AT3G27050.1 (unknown protein; Has 43 Blast hits to 43 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 199.1 bits (505), Expect = 3.1e-51
Identity = 112/173 (64.74%), Postives = 135/173 (78.03%), Query Frame = 0


Query: 11  STSHSPAMLSRAQLFHLFSRFSALTSLSDVKKRIAAAVRDDKQEAVAVTTAIQEEIFSEM 70
           S+  S  ML++ Q+ +LF RF  LTS SDVKKRI+ AV DDKQEAVAVTTAIQEEIF EM
Sbjct: 3   SSLQSSGMLTKEQMVYLFDRFDYLTSQSDVKKRISDAV-DDKQEAVAVTTAIQEEIFLEM 62

Query: 71  GVDAQFGISCLGKVNSFYENDQELMVHFYKFIAMEEMACDEAELEPDEFAEKMHSQQQLH 130
           G+D  FGI CLGK+NS YEND+ELM+ FYKF+A EEMAC+EAEL  D F +KM + QQL 
Sbjct: 63  GIDPGFGIGCLGKLNSAYENDKELMIGFYKFLAKEEMACEEAELGQDGFEQKMKALQQLQ 122

Query: 131 EKQLEMLKHMRKLHSDDQCAILEKLHQQLESAEFDGMASILSSEEIQEIVERR 184
           E+QLEMLK+MRK   DDQ AIL+KL +QLE+A F+  AS+LS EE++E   RR
Sbjct: 123 EQQLEMLKYMRKFSLDDQSAILQKLQKQLENAGFEPEASLLSGEEMEEAGRRR 174

The following BLAST results are available for this feature:

BLAST of MS009823 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156519.1	3.7e-83	98.83	uncharacterized protein LOC111023401 [Momordica charantia]	[more]
XP_038876177.1	3.9e-72	86.55	uncharacterized protein LOC120068461 [Benincasa hispida]	[more]
XP_008450107.1	1.1e-69	79.23	PREDICTED: uncharacterized protein LOC103491795 [Cucumis melo]	[more]
XP_004145662.1	5.3e-69	79.89	uncharacterized protein LOC101214890 [Cucumis sativus] >KAE8650775.1 hypothetica...	[more]
TYK05319.1	4.4e-68	79.23	plant/MOJ10-14 protein [Cucumis melo var. makuwa]	[more]

BLAST of MS009823 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS009823 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DTQ6	1.8e-83	98.83	uncharacterized protein LOC111023401 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A1S3BNJ5	5.1e-70	79.23	uncharacterized protein LOC103491795 OS=Cucumis melo OX=3656 GN=LOC103491795 PE=...	[more]
A0A0A0LS98	2.5e-69	79.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097730 PE=4 SV=1	[more]
A0A5D3C4L8	2.2e-68	79.23	Plant/MOJ10-14 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A6J1EJ73	9.1e-67	78.98	uncharacterized protein LOC111435086 OS=Cucurbita moschata OX=3662 GN=LOC1114350...	[more]

BLAST of MS009823 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27050.1	3.1e-51	64.74	unknown protein; Has 43 Blast hits to 43 proteins in 17 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36763	EXPRESSED PROTEIN	coord: 14..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009823.1	MS009823.1	mRNA