MS009712 (gene) Bitter gourd (TR) v1

Overview


Name	MS009712
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Serine protease inhibitor, Kazal-type family protein
Location	scaffold411: 85310 .. 85675 (+)
RNA-Seq Expression	MS009712
Synteny	MS009712

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCCCTTCTCTCCACCCTCGCTTTTCTTCTTTTCACTCCTCATCTTGGTCTGTGCAGTCCGATCTGAGCATGATTCCTACGCCGGGGACCGCGACCGCGACCGCGACGTAGATCTCTGTCCTGCCTCCATGCCCTCTTCTTGCCCCGTCAAATGCTTTAGGACGGACCCGGTCTGCGGCGTTGATGGCGTTACCTACTGGTGTGGTTGCGCCGATGCTTTGTGTTCAGGCGTCAAGGTCGCCAGCTTGGGATTCTGTGAGGTCGGCAACGGGGGCTCTGCTCCTATTCCCGGCCAGGCCCTCCTTCTGGTGCATATTTTGTGGCTCATCATCCTCGGAGTTTCCGTCTTGTTTGGACTCTTC

mRNA sequence

ATGACCCCCTTCTCTCCACCCTCGCTTTTCTTCTTTTCACTCCTCATCTTGGTCTGTGCAGTCCGATCTGAGCATGATTCCTACGCCGGGGACCGCGACCGCGACCGCGACGTAGATCTCTGTCCTGCCTCCATGCCCTCTTCTTGCCCCGTCAAATGCTTTAGGACGGACCCGGTCTGCGGCGTTGATGGCGTTACCTACTGGTGTGGTTGCGCCGATGCTTTGTGTTCAGGCGTCAAGGTCGCCAGCTTGGGATTCTGTGAGGTCGGCAACGGGGGCTCTGCTCCTATTCCCGGCCAGGCCCTCCTTCTGGTGCATATTTTGTGGCTCATCATCCTCGGAGTTTCCGTCTTGTTTGGACTCTTC

Coding sequence (CDS)

ATGACCCCCTTCTCTCCACCCTCGCTTTTCTTCTTTTCACTCCTCATCTTGGTCTGTGCAGTCCGATCTGAGCATGATTCCTACGCCGGGGACCGCGACCGCGACCGCGACGTAGATCTCTGTCCTGCCTCCATGCCCTCTTCTTGCCCCGTCAAATGCTTTAGGACGGACCCGGTCTGCGGCGTTGATGGCGTTACCTACTGGTGTGGTTGCGCCGATGCTTTGTGTTCAGGCGTCAAGGTCGCCAGCTTGGGATTCTGTGAGGTCGGCAACGGGGGCTCTGCTCCTATTCCCGGCCAGGCCCTCCTTCTGGTGCATATTTTGTGGCTCATCATCCTCGGAGTTTCCGTCTTGTTTGGACTCTTC

Protein sequence

MTPFSPPSLFFFSLLILVCAVRSEHDSYAGDRDRDRDVDLCPASMPSSCPVKCFRTDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFGLF

Homology

[Close]

BLAST of MS009712 vs. NCBI nr
Match: XP_022140968.1 (uncharacterized protein LOC111011494 [Momordica charantia])

HSP 1 Score: 251.9 bits (642), Expect = 2.8e-63
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MTPFSPPSLFFFSLLILVCAVRSEHDSYAGDRDRDRDVDLCPASMPSSCPVKCFRTDPVC 60
           MTPFS PSLFFFSLLILVCAVRSEHDSYAGDRDRDRDVDLCPASMPSSCPVKCFRTDPVC
Sbjct: 1   MTPFSSPSLFFFSLLILVCAVRSEHDSYAGDRDRDRDVDLCPASMPSSCPVKCFRTDPVC 60

Query: 61  GVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFG 120
           GVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFG
Sbjct: 61  GVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFG 120

Query: 121 LF 123
           LF
Sbjct: 121 LF 122

[Close]

BLAST of MS009712 vs. NCBI nr
Match: XP_022922853.1 (uncharacterized protein LOC111430710 [Cucurbita moschata] >XP_022985062.1 uncharacterized protein LOC111483145 [Cucurbita maxima] >XP_023552497.1 uncharacterized protein LOC111810142 [Cucurbita pepo subsp. pepo] >KAG7014664.1 hypothetical protein SDJN02_22293, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 101/130 (77.69%), Postives = 107/130 (82.31%), Query Frame = 0


Query: 1   MTPFSPPS---LFFFSLLILVCAVRSEHDSYA-----GDRDRDRDVDLCPASMPSSCPVK 60
           M PFS P    L FFSLLI V  VRS+H S A        + DRD+DLCP S+PSSCPVK
Sbjct: 1   MVPFSKPPISILLFFSLLIFVFEVRSQHVSSAIRLPSEATNNDRDLDLCPVSLPSSCPVK 60

Query: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLII 120
           CFRTDPVCGVDG+TYWCGCADALCSGVKVA +GFCEVGNGGSAPIPGQALLLVHILWLII
Sbjct: 61  CFRTDPVCGVDGLTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALLLVHILWLII 120

Query: 121 LGVSVLFGLF 123
           LGVSVLFGLF
Sbjct: 121 LGVSVLFGLF 130

[Close]

BLAST of MS009712 vs. NCBI nr
Match: XP_038892451.1 (uncharacterized protein LOC120081544 [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45
Identity = 100/127 (78.74%), Postives = 105/127 (82.68%), Query Frame = 0


Query: 4   FSPPSL---FFFSLLILVCAVRSEHDSYA-----GDRDRDRDVDLCPASMPSSCPVKCFR 63
           FS P +   FFFSLLI V AVRSE  S A        + D DVDLCP S+PSSCPVKCFR
Sbjct: 4   FSRPPISIVFFFSLLIFVFAVRSEDVSSAIRLPSEATNNDGDVDLCPVSVPSSCPVKCFR 63

Query: 64  TDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGV 123
           TDPVCGVDG+TYWCGCADALCSGVKVA +GFCEVGNGGSAPIPGQALLLVHILWLIILGV
Sbjct: 64  TDPVCGVDGLTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALLLVHILWLIILGV 123

[Close]

BLAST of MS009712 vs. NCBI nr
Match: XP_016902950.1 (PREDICTED: uncharacterized protein LOC107991954 [Cucumis melo] >KAA0056649.1 uncharacterized protein E6C27_scaffold288G001800 [Cucumis melo var. makuwa] >TYK04610.1 uncharacterized protein E5676_scaffold351G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 190.7 bits (483), Expect = 7.7e-45
Identity = 100/130 (76.92%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MTPFSPPS---LFFFSLLILVCAVRSEHDSYA-----GDRDRDRDVDLCPASMPSSCPVK 60
           M  FS P    +FFFSLLI V AVRSE  S A        + D DVDLCP S+PS CPVK
Sbjct: 1   MILFSAPPVSIVFFFSLLIFVFAVRSEDVSSAIRLPSEATNNDGDVDLCPVSVPSYCPVK 60

Query: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLII 120
           CFRTDPVCGVDGVTYWCGCADALCSGVKVA +GFCEVGNGGSAPIPGQAL LVHILWLII
Sbjct: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALFLVHILWLII 120

Query: 121 LGVSVLFGLF 123
           LGVSVLFGLF
Sbjct: 121 LGVSVLFGLF 130

[Close]

BLAST of MS009712 vs. NCBI nr
Match: XP_004140750.1 (uncharacterized protein LOC101210178 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 7.7e-45
Identity = 100/130 (76.92%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MTPFSPPS---LFFFSLLILVCAVRSEHDSYA-----GDRDRDRDVDLCPASMPSSCPVK 60
           MT FS P    +F F LLI V  VRSE  S A        + D DVDLCP S+PSSCPVK
Sbjct: 1   MTLFSRPQISIIFLFLLLIFVFPVRSEDVSSAIRLPSEATNNDGDVDLCPVSVPSSCPVK 60

Query: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLII 120
           CFRTDPVCGVDGVTYWCGCADALCSGVKVA +GFCEVGNGGSAPIPGQALLLVHILWLII
Sbjct: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALLLVHILWLII 120

Query: 121 LGVSVLFGLF 123
           LGVSVLFGLF
Sbjct: 121 LGVSVLFGLF 130

[Close]

BLAST of MS009712 vs. ExPASy TrEMBL
Match: A0A6J1CJ86 (uncharacterized protein LOC111011494 OS=Momordica charantia OX=3673 GN=LOC111011494 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-63
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MTPFSPPSLFFFSLLILVCAVRSEHDSYAGDRDRDRDVDLCPASMPSSCPVKCFRTDPVC 60
           MTPFS PSLFFFSLLILVCAVRSEHDSYAGDRDRDRDVDLCPASMPSSCPVKCFRTDPVC
Sbjct: 1   MTPFSSPSLFFFSLLILVCAVRSEHDSYAGDRDRDRDVDLCPASMPSSCPVKCFRTDPVC 60

Query: 61  GVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFG 120
           GVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFG
Sbjct: 61  GVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFG 120

Query: 121 LF 123
           LF
Sbjct: 121 LF 122

[Close]

BLAST of MS009712 vs. ExPASy TrEMBL
Match: A0A6J1J3U9 (uncharacterized protein LOC111483145 OS=Cucurbita maxima OX=3661 GN=LOC111483145 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 101/130 (77.69%), Postives = 107/130 (82.31%), Query Frame = 0


Query: 1   MTPFSPPS---LFFFSLLILVCAVRSEHDSYA-----GDRDRDRDVDLCPASMPSSCPVK 60
           M PFS P    L FFSLLI V  VRS+H S A        + DRD+DLCP S+PSSCPVK
Sbjct: 1   MVPFSKPPISILLFFSLLIFVFEVRSQHVSSAIRLPSEATNNDRDLDLCPVSLPSSCPVK 60

Query: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLII 120
           CFRTDPVCGVDG+TYWCGCADALCSGVKVA +GFCEVGNGGSAPIPGQALLLVHILWLII
Sbjct: 61  CFRTDPVCGVDGLTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALLLVHILWLII 120

Query: 121 LGVSVLFGLF 123
           LGVSVLFGLF
Sbjct: 121 LGVSVLFGLF 130

[Close]

BLAST of MS009712 vs. ExPASy TrEMBL
Match: A0A6J1E7Y6 (uncharacterized protein LOC111430710 OS=Cucurbita moschata OX=3662 GN=LOC111430710 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 101/130 (77.69%), Postives = 107/130 (82.31%), Query Frame = 0


Query: 1   MTPFSPPS---LFFFSLLILVCAVRSEHDSYA-----GDRDRDRDVDLCPASMPSSCPVK 60
           M PFS P    L FFSLLI V  VRS+H S A        + DRD+DLCP S+PSSCPVK
Sbjct: 1   MVPFSKPPISILLFFSLLIFVFEVRSQHVSSAIRLPSEATNNDRDLDLCPVSLPSSCPVK 60

Query: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLII 120
           CFRTDPVCGVDG+TYWCGCADALCSGVKVA +GFCEVGNGGSAPIPGQALLLVHILWLII
Sbjct: 61  CFRTDPVCGVDGLTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALLLVHILWLII 120

Query: 121 LGVSVLFGLF 123
           LGVSVLFGLF
Sbjct: 121 LGVSVLFGLF 130

[Close]

BLAST of MS009712 vs. ExPASy TrEMBL
Match: A0A5A7UT13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00140 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.7e-45
Identity = 100/130 (76.92%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MTPFSPPS---LFFFSLLILVCAVRSEHDSYA-----GDRDRDRDVDLCPASMPSSCPVK 60
           M  FS P    +FFFSLLI V AVRSE  S A        + D DVDLCP S+PS CPVK
Sbjct: 1   MILFSAPPVSIVFFFSLLIFVFAVRSEDVSSAIRLPSEATNNDGDVDLCPVSVPSYCPVK 60

Query: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLII 120
           CFRTDPVCGVDGVTYWCGCADALCSGVKVA +GFCEVGNGGSAPIPGQAL LVHILWLII
Sbjct: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALFLVHILWLII 120

Query: 121 LGVSVLFGLF 123
           LGVSVLFGLF
Sbjct: 121 LGVSVLFGLF 130

[Close]

BLAST of MS009712 vs. ExPASy TrEMBL
Match: A0A0A0L616 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G184020 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.7e-45
Identity = 100/130 (76.92%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MTPFSPPS---LFFFSLLILVCAVRSEHDSYA-----GDRDRDRDVDLCPASMPSSCPVK 60
           MT FS P    +F F LLI V  VRSE  S A        + D DVDLCP S+PSSCPVK
Sbjct: 1   MTLFSRPQISIIFLFLLLIFVFPVRSEDVSSAIRLPSEATNNDGDVDLCPVSVPSSCPVK 60

Query: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLII 120
           CFRTDPVCGVDGVTYWCGCADALCSGVKVA +GFCEVGNGGSAPIPGQALLLVHILWLII
Sbjct: 61  CFRTDPVCGVDGVTYWCGCADALCSGVKVAKMGFCEVGNGGSAPIPGQALLLVHILWLII 120

Query: 121 LGVSVLFGLF 123
           LGVSVLFGLF
Sbjct: 121 LGVSVLFGLF 130

[Close]

BLAST of MS009712 vs. TAIR 10
Match: AT4G01575.1 (serine protease inhibitor, Kazal-type family protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.7e-29
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 21  VRSEHDSYAGDRDRDRDVDLCPA-SMPSSCPVKCFRTDPVCGVDGVTYWCGCADALCSGV 80
           +R   +   G+++R    + C   + P+SCPV+CFR DPVCG D VTYWCGCADALC GV
Sbjct: 45  IRLPSEKINGEKNRG---EFCEGIAKPASCPVQCFRPDPVCGEDSVTYWCGCADALCHGV 104

Query: 81  KVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFGLF 123
           +V   G C+VGNG    +PGQALLL+HI+W+++LG S+LFGLF
Sbjct: 105 RVVKQGACDVGNGVGLSVPGQALLLIHIVWMMLLGFSILFGLF 144

[Close]

BLAST of MS009712 vs. TAIR 10
Match: AT3G61980.1 (serine protease inhibitor, Kazal-type family protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.2e-26
Identity = 54/110 (49.09%), Postives = 70/110 (63.64%), Query Frame = 0


Query: 14  LLILVCAVRSEHDSYAGDRDRDRDVDLCP-ASMPSSCPVKCFRTDPVCGVDGVTYWCGCA 73
           L +++C +  +      D+ R    D+CP       C + CFR DPVCG DGVTYWCGC 
Sbjct: 11  LFLVLCLIGLQAADDFPDKSRG---DVCPRVKDRGGCTINCFRADPVCGTDGVTYWCGCP 70

Query: 74  DALCSGVKVASLGFCEVGNGGSAPIPGQALLLVHILWLIILGVSVLFGLF 123
           DA C G +V   G C+ GN GSA +PGQALLL+HI+WL +LG+S+L G F
Sbjct: 71  DAACHGARVVKKGACDTGNAGSASVPGQALLLIHIVWLFLLGLSLLVGGF 117

The following BLAST results are available for this feature:

BLAST of MS009712 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140968.1	2.8e-63	99.18	uncharacterized protein LOC111011494 [Momordica charantia]	[more]
XP_022922853.1	2.8e-47	77.69	uncharacterized protein LOC111430710 [Cucurbita moschata] >XP_022985062.1 unchar...	[more]
XP_038892451.1	1.2e-45	78.74	uncharacterized protein LOC120081544 [Benincasa hispida]	[more]
XP_016902950.1	7.7e-45	76.92	PREDICTED: uncharacterized protein LOC107991954 [Cucumis melo] >KAA0056649.1 unc...	[more]
XP_004140750.1	7.7e-45	76.92	uncharacterized protein LOC101210178 [Cucumis sativus]	[more]

BLAST of MS009712 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS009712 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CJ86	1.4e-63	99.18	uncharacterized protein LOC111011494 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1J3U9	1.4e-47	77.69	uncharacterized protein LOC111483145 OS=Cucurbita maxima OX=3661 GN=LOC111483145...	[more]
A0A6J1E7Y6	1.4e-47	77.69	uncharacterized protein LOC111430710 OS=Cucurbita moschata OX=3662 GN=LOC1114307...	[more]
A0A5A7UT13	3.7e-45	76.92	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0L616	3.7e-45	76.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G184020 PE=4 SV=1	[more]

BLAST of MS009712 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01575.1	3.7e-29	55.34	serine protease inhibitor, Kazal-type family protein	[more]
AT3G61980.1	2.2e-26	49.09	serine protease inhibitor, Kazal-type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34376	SERINE PROTEASE INHIBITOR, KAZAL-TYPE FAMILY PROTEIN	coord: 8..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009712.1	MS009712.1	mRNA