MS009690 (gene) Bitter gourd (TR) v1

Overview


Name	MS009690
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	S-protein homolog
Location	scaffold813: 3278898 .. 3279353 (+)
RNA-Seq Expression	MS009690
Synteny	MS009690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGGCAGATGGCAAATGGTTGTGTTGCTTGTCTCGTCGGCTCTGATGGTGGTGGGGGCACAGCAATTACTGCCAATGGTGGACGTGGAGCCAAAAAGTAGAGATGACAAACGTGTGTGGCGCGTTTATGTGGCCAATGGGTTGAGCAGTGAGATTCTATTTCTGCACTGCAAGTCCAAAGACACTGACATTGGGGAGCGCAACTTGGACCTTGGAGCTCAAATCCAGTGGAAATTTCAAGTCAACTTTTGGGGGACGACGTTGTATTGGTGTTTCATGCGAAAGGGTAGCGACTCGGTCTCGTTAGATGTCTTCTGGGTTGAACGTAAGACCTCGTGGCTCCGCCCGAGGTGCGCTCCTCAAACAATGAGTTGTATTTGGATAGCCAAAGATGACGGAATTTACATAAGAAACCTTTCTGAAAATGTGGATGAGGTGATTCATAAATGGAACGAG

mRNA sequence

CTTGGCAGATGGCAAATGGTTGTGTTGCTTGTCTCGTCGGCTCTGATGGTGGTGGGGGCACAGCAATTACTGCCAATGGTGGACGTGGAGCCAAAAAGTAGAGATGACAAACGTGTGTGGCGCGTTTATGTGGCCAATGGGTTGAGCAGTGAGATTCTATTTCTGCACTGCAAGTCCAAAGACACTGACATTGGGGAGCGCAACTTGGACCTTGGAGCTCAAATCCAGTGGAAATTTCAAGTCAACTTTTGGGGGACGACGTTGTATTGGTGTTTCATGCGAAAGGGTAGCGACTCGGTCTCGTTAGATGTCTTCTGGGTTGAACGTAAGACCTCGTGGCTCCGCCCGAGGTGCGCTCCTCAAACAATGAGTTGTATTTGGATAGCCAAAGATGACGGAATTTACATAAGAAACCTTTCTGAAAATGTGGATGAGGTGATTCATAAATGGAACGAG

Coding sequence (CDS)

CTTGGCAGATGGCAAATGGTTGTGTTGCTTGTCTCGTCGGCTCTGATGGTGGTGGGGGCACAGCAATTACTGCCAATGGTGGACGTGGAGCCAAAAAGTAGAGATGACAAACGTGTGTGGCGCGTTTATGTGGCCAATGGGTTGAGCAGTGAGATTCTATTTCTGCACTGCAAGTCCAAAGACACTGACATTGGGGAGCGCAACTTGGACCTTGGAGCTCAAATCCAGTGGAAATTTCAAGTCAACTTTTGGGGGACGACGTTGTATTGGTGTTTCATGCGAAAGGGTAGCGACTCGGTCTCGTTAGATGTCTTCTGGGTTGAACGTAAGACCTCGTGGCTCCGCCCGAGGTGCGCTCCTCAAACAATGAGTTGTATTTGGATAGCCAAAGATGACGGAATTTACATAAGAAACCTTTCTGAAAATGTGGATGAGGTGATTCATAAATGGAACGAG

Protein sequence

LGRWQMVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKWNE

Homology

[Close]

BLAST of MS009690 vs. NCBI nr
Match: XP_022155209.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 313.5 bits (802), Expect = 9.8e-82
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 6   MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIG 65
           MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIG
Sbjct: 1   MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIG 60

Query: 66  ERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSC 125
           ERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSC
Sbjct: 61  ERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSC 120

Query: 126 IWIAKDDGIYIRNLSENVDEVIHKWNE 153
           IWIAKDDGIYIRNLSENVDEVIHKWNE
Sbjct: 121 IWIAKDDGIYIRNLSENVDEVIHKWNE 147

[Close]

BLAST of MS009690 vs. NCBI nr
Match: XP_022155227.1 (S-protein homolog 74-like [Momordica charantia])

HSP 1 Score: 185.7 bits (470), Expect = 3.1e-43
Identity = 87/151 (57.62%), Postives = 112/151 (74.17%), Query Frame = 0


Query: 6   MVVLLVSSALMVVGA---QQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDT 65
           ++VLLV SAL+V  A   +QL P+V+V+       R + ++VANGLS +I ++ CKSKDT
Sbjct: 8   VIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTR-FLIHVANGLSGDICYVSCKSKDT 67

Query: 66  DIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRC-APQ 125
           +IG   LDLGA I W F+ NFWGTTL+WCF  K     S DVFWVE+++SWLR RC   +
Sbjct: 68  NIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDE 127

Query: 126 TMSCIWIAKDDGIYIRNLSENVDEVIHKWNE 153
           T++CIWI KDDGIYIRNL++NVDE+IHKWNE
Sbjct: 128 TLTCIWIVKDDGIYIRNLTQNVDELIHKWNE 157

[Close]

BLAST of MS009690 vs. NCBI nr
Match: XP_022148919.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 174.9 bits (442), Expect = 5.4e-40
Identity = 77/150 (51.33%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 6   MVVLLVSSALMVVGAQQLLPMVDVEPKS---RDDKRVWRVYVANGLSSEILFLHCKSKDT 65
           MV+LLV ++L+VV  QQ++  +    K+   ++    W ++V NGLS + LF+HCKSKD 
Sbjct: 35  MVLLLVLASLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDN 94

Query: 66  DIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQT 125
           D+G  NL  G +IQW F  N WGTTL+WCF+RK   + S DVFWVE + +WL  RCA   
Sbjct: 95  DVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCA--I 154

Query: 126 MSCIWIAKDDGIYIRNLSENVDEVIHKWNE 153
           ++CIWIAKDDGIY+RN S+++DE+IHKW +
Sbjct: 155 LTCIWIAKDDGIYLRNNSDHIDELIHKWGK 182

[Close]

BLAST of MS009690 vs. NCBI nr
Match: XP_022155249.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 171.8 bits (434), Expect = 4.6e-39
Identity = 86/150 (57.33%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 6   MVVLLVSSALMV--VGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTD 65
           M+VLLV SAL+V   G  QL P+VDV  K R    V+ +++ NGL  EI+F+ CKSKDT+
Sbjct: 8   MIVLLVWSALVVAAAGQDQLSPVVDVIRKGR-QSNVFHLHMVNGL-DEIIFVRCKSKDTN 67

Query: 66  IGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQ-T 125
           IG+  LDLGA+I W F+ N WGTTLYWC+  K    VS DVFW E KT WL  RC  +  
Sbjct: 68  IGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSE-KTQWLGERCGGRGV 127

Query: 126 MSCIWIAKDDGIYIRNLSENVDEVIHKWNE 153
           ++ IWIAK+DGIY+RNL++NVDE+IHKWNE
Sbjct: 128 LNLIWIAKEDGIYLRNLTKNVDELIHKWNE 154

[Close]

BLAST of MS009690 vs. NCBI nr
Match: XP_022143724.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-35
Identity = 77/146 (52.74%), Postives = 98/146 (67.12%), Query Frame = 0


Query: 6   MVVLLVSSALMVVGAQQLLPMVD-VEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDI 65
           +V+L V +AL V       P V+ + P    DK  W V+V NGLS+  LF HCKS+DTD+
Sbjct: 5   VVLLAVLAALTVA-----QPFVEALAPTPYVDK--WHVHVVNGLSNATLFAHCKSRDTDL 64

Query: 66  GERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMS 125
           GE NL+ GA+IQW F+ N WGTTL+WCF++K   S S DVFW E    WL  RC     +
Sbjct: 65  GEHNLNRGAEIQWSFKENVWGTTLFWCFLKKPGGSASFDVFWREVDHLWLHYRCT-NDGT 124

Query: 126 CIWIAKDDGIYIRNLSENVDEVIHKW 151
           CIW AKDDGIYIRN+ +N+DE++HKW
Sbjct: 125 CIWTAKDDGIYIRNIPDNLDELVHKW 142

[Close]

BLAST of MS009690 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.4e-19
Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 40  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSD 99
           W+V V NGL++ E LF+HCKSK+ D+GE NL    +  W F  N   +T +WC+M K + 
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNG 100

Query: 100 SVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW 151
            ++++VFW +     L  RC     +CIW AK DG+Y+ N +   D +  KW
Sbjct: 101 HMNVNVFWDD---VILFHRCG--WKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of MS009690 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19
Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 40  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSD 99
           W+V VANGL++ E LF+HCKSK+ D+G+ NL    +  W F  N   +TL+WC+M K   
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDDG 100

Query: 100 SVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW 151
            +++ VFW +     L  RC     +C+W AK+DG+Y+ N +   D +  KW
Sbjct: 101 HMNVKVFWDD---VILFHRC--DWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of MS009690 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 34/90 (37.78%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 46  NGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVF 105
           N  +  IL +HCKSK+ DIG + L +G  + + F+ NFWGTT +WC + KG D       
Sbjct: 33  NPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGI 92

Query: 106 WVERKTSWLRPRCAPQTMSCIWIAKDDGIY 136
              +         A    S  W+A+DDGIY
Sbjct: 93  TAYQAIGLF----AKDGSSYNWLARDDGIY 118

[Close]

BLAST of MS009690 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09
Identity = 38/111 (34.23%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 41  RVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWC-FMRKGSDS 100
           RV + N  +  +L +HCKS+D D G   L  G    W F VNF  +TLY+C F ++    
Sbjct: 33  RVVIYND-NDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKK 92

Query: 101 VSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW 151
              D++   R +S    RC     +C W AK+DGIY        + + +KW
Sbjct: 93  GVFDIYKAVRDSS----RC----RNCTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of MS009690 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09
Identity = 38/104 (36.54%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 41  RVYVANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSV 100
           R+ V N  +  +L +HCKSKD D+G      G    WKF VNF  +TLY+C   +G D+ 
Sbjct: 48  RITVKNN-NDYLLGIHCKSKDDDLGFHIHKEGELYGWKFHVNFQNSTLYFCGFSQGQDNK 107

Query: 101 SLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY-IRNLSENV 144
              VF ++R       R   +  +C W AK D +Y   NL + V
Sbjct: 108 G--VFDIDR-----AERDFYRCRNCTWNAKKDSLYGYSNLPQTV 143

[Close]

BLAST of MS009690 vs. ExPASy TrEMBL
Match: A0A6J1DPK8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022349 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 4.7e-82
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 6   MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIG 65
           MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIG
Sbjct: 1   MVVLLVSSALMVVGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDIG 60

Query: 66  ERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSC 125
           ERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSC
Sbjct: 61  ERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMSC 120

Query: 126 IWIAKDDGIYIRNLSENVDEVIHKWNE 153
           IWIAKDDGIYIRNLSENVDEVIHKWNE
Sbjct: 121 IWIAKDDGIYIRNLSENVDEVIHKWNE 147

[Close]

BLAST of MS009690 vs. ExPASy TrEMBL
Match: A0A6J1DNS4 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022369 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.5e-43
Identity = 87/151 (57.62%), Postives = 112/151 (74.17%), Query Frame = 0


Query: 6   MVVLLVSSALMVVGA---QQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDT 65
           ++VLLV SAL+V  A   +QL P+V+V+       R + ++VANGLS +I ++ CKSKDT
Sbjct: 8   VIVLLVWSALVVAAAADQKQLYPVVEVQHVDHSSTR-FLIHVANGLSGDICYVSCKSKDT 67

Query: 66  DIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRC-APQ 125
           +IG   LDLGA I W F+ NFWGTTL+WCF  K     S DVFWVE+++SWLR RC   +
Sbjct: 68  NIGGHFLDLGANIGWHFEPNFWGTTLFWCFASKSGAKASFDVFWVEKRSSWLRERCGGDE 127

Query: 126 TMSCIWIAKDDGIYIRNLSENVDEVIHKWNE 153
           T++CIWI KDDGIYIRNL++NVDE+IHKWNE
Sbjct: 128 TLTCIWIVKDDGIYIRNLTQNVDELIHKWNE 157

[Close]

BLAST of MS009690 vs. ExPASy TrEMBL
Match: A0A6J1D5G6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111017469 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.6e-40
Identity = 77/150 (51.33%), Postives = 106/150 (70.67%), Query Frame = 0


Query: 6   MVVLLVSSALMVVGAQQLLPMVDVEPKS---RDDKRVWRVYVANGLSSEILFLHCKSKDT 65
           MV+LLV ++L+VV  QQ++  +    K+   ++    W ++V NGLS + LF+HCKSKD 
Sbjct: 35  MVLLLVLASLLVVADQQIITQIGQALKNIPVKNPDTAWHIHVVNGLSKDSLFVHCKSKDN 94

Query: 66  DIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQT 125
           D+G  NL  G +IQW F  N WGTTL+WCF+RK   + S DVFWVE + +WL  RCA   
Sbjct: 95  DVGLHNLARGFEIQWSFDENVWGTTLFWCFLRKPGATASFDVFWVESRHNWLHHRCA--I 154

Query: 126 MSCIWIAKDDGIYIRNLSENVDEVIHKWNE 153
           ++CIWIAKDDGIY+RN S+++DE+IHKW +
Sbjct: 155 LTCIWIAKDDGIYLRNNSDHIDELIHKWGK 182

[Close]

BLAST of MS009690 vs. ExPASy TrEMBL
Match: A0A6J1DPP7 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022387 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.2e-39
Identity = 86/150 (57.33%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 6   MVVLLVSSALMV--VGAQQLLPMVDVEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTD 65
           M+VLLV SAL+V   G  QL P+VDV  K R    V+ +++ NGL  EI+F+ CKSKDT+
Sbjct: 8   MIVLLVWSALVVAAAGQDQLSPVVDVIRKGR-QSNVFHLHMVNGL-DEIIFVRCKSKDTN 67

Query: 66  IGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQ-T 125
           IG+  LDLGA+I W F+ N WGTTLYWC+  K    VS DVFW E KT WL  RC  +  
Sbjct: 68  IGDHFLDLGAEIVWHFEANIWGTTLYWCYAAKAGAKVSFDVFWSE-KTQWLGERCGGRGV 127

Query: 126 MSCIWIAKDDGIYIRNLSENVDEVIHKWNE 153
           ++ IWIAK+DGIY+RNL++NVDE+IHKWNE
Sbjct: 128 LNLIWIAKEDGIYLRNLTKNVDELIHKWNE 154

[Close]

BLAST of MS009690 vs. ExPASy TrEMBL
Match: A0A6J1CQ65 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 8.7e-36
Identity = 77/146 (52.74%), Postives = 98/146 (67.12%), Query Frame = 0


Query: 6   MVVLLVSSALMVVGAQQLLPMVD-VEPKSRDDKRVWRVYVANGLSSEILFLHCKSKDTDI 65
           +V+L V +AL V       P V+ + P    DK  W V+V NGLS+  LF HCKS+DTD+
Sbjct: 5   VVLLAVLAALTVA-----QPFVEALAPTPYVDK--WHVHVVNGLSNATLFAHCKSRDTDL 64

Query: 66  GERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVFWVERKTSWLRPRCAPQTMS 125
           GE NL+ GA+IQW F+ N WGTTL+WCF++K   S S DVFW E    WL  RC     +
Sbjct: 65  GEHNLNRGAEIQWSFKENVWGTTLFWCFLKKPGGSASFDVFWREVDHLWLHYRCT-NDGT 124

Query: 126 CIWIAKDDGIYIRNLSENVDEVIHKW 151
           CIW AKDDGIYIRN+ +N+DE++HKW
Sbjct: 125 CIWTAKDDGIYIRNIPDNLDELVHKW 142

[Close]

BLAST of MS009690 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 97.4 bits (241), Expect = 1.0e-20
Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 40  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSD 99
           W+V V NGL++ E LF+HCKSK+ D+GE NL    +  W F  N   +T +WC+M K + 
Sbjct: 41  WQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNG 100

Query: 100 SVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW 151
            ++++VFW +     L  RC     +CIW AK DG+Y+ N +   D +  KW
Sbjct: 101 HMNVNVFWDD---VILFHRCG--WKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of MS009690 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 96.7 bits (239), Expect = 1.7e-20
Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 40  WRVYVANGLSS-EILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSD 99
           W+V VANGL++ E LF+HCKSK+ D+G+ NL    +  W F  N   +TL+WC+M K   
Sbjct: 41  WQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDDG 100

Query: 100 SVSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW 151
            +++ VFW +     L  RC     +C+W AK+DG+Y+ N +   D +  KW
Sbjct: 101 HMNVKVFWDD---VILFHRC--DWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of MS009690 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 34/90 (37.78%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 46  NGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLDVF 105
           N  +  IL +HCKSK+ DIG + L +G  + + F+ NFWGTT +WC + KG D       
Sbjct: 33  NPKNKNILKVHCKSKNNDIGVKYLKIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGI 92

Query: 106 WVERKTSWLRPRCAPQTMSCIWIAKDDGIY 136
              +         A    S  W+A+DDGIY
Sbjct: 93  TAYQAIGLF----AKDGSSYNWLARDDGIY 118

[Close]

BLAST of MS009690 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.8 bits (164), Expect = 8.7e-12
Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 41  RVYVANGLS-SEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDS 100
           +V ++N L  S++L +HC+SKD D+GE  L +G   ++ F  N W TT + C M +G  +
Sbjct: 28  KVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQG-PN 87

Query: 101 VSLDVFWVERKTSWLRPRCAPQTMSCIWIAKDDGIY 136
               + +V  +TSW +   A    SC WI ++DGIY
Sbjct: 88  FKHHLDFVAYETSWSKALEA----SCKWIGREDGIY 118

[Close]

BLAST of MS009690 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 0


Query: 44  VANGLSSEILFLHCKSKDTDIGERNLDLGAQIQWKFQVNFWGTTLYWCFMRKGSDSVSLD 103
           V N L++++L + C+SKD ++G+  L +G   +  F  N W  TL+WC + KG D   L 
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPD-FKLH 85

Query: 104 VFWVERKTSWLRPRCAPQTMSCIWIAKDDGIYIRNLSENVDEVIHKW 151
           V +   ++ W +    P+    +WIA++DGIY     E   +  + W
Sbjct: 86  VAFDAYRSQW-KADIGPR---YLWIAREDGIYYTQHPETPPKKKYDW 127

The following BLAST results are available for this feature:

BLAST of MS009690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155209.1	9.8e-82	100.00	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022155227.1	3.1e-43	57.62	S-protein homolog 74-like [Momordica charantia]	[more]
XP_022148919.1	5.4e-40	51.33	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022155249.1	4.6e-39	57.33	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022143724.1	1.8e-35	52.74	S-protein homolog 1-like [Momordica charantia]	[more]

BLAST of MS009690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.4e-19	40.18	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	2.5e-19	40.18	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9LW22	1.4e-11	37.78	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
F2Q9V4	1.0e-09	34.23	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q9FI84	3.0e-09	36.54	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]

BLAST of MS009690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPK8	4.7e-82	100.00	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022349 PE=3 SV=1	[more]
A0A6J1DNS4	1.5e-43	57.62	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022369 PE=3 SV=1	[more]
A0A6J1D5G6	2.6e-40	51.33	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111017469 PE=3 SV=1	[more]
A0A6J1DPP7	2.2e-39	57.33	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022387 PE=3 SV=1	[more]
A0A6J1CQ65	8.7e-36	52.74	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013561 PE=3 SV=1	[more]

BLAST of MS009690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.0e-20	40.18	S-protein homologue 1	[more]
AT4G29035.1	1.7e-20	40.18	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	1.0e-12	37.78	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	8.7e-12	37.50	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	1.1e-11	31.78	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 42..150 e-value: 1.3E-24 score: 86.7
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 33..136
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 33..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009690.1	MS009690.1	mRNA