MS009633 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCCCAAATTGGGTAGTCCCTTCAGGATGAAGAACATCAGAAATGGTAAGCTGAGATCAGAAGATGATGAAAATTCCAGAAATTTGAAGGCTGTTGGGTTGGGAACAATTCTTGTTCATCCATCACCACAACAAAATCTAGTGGTCAAACAATCCATAAAACTTACTTTTTCTTCACTTCCACCCAATTCTATCAACAACCCATGTTTTCTCAGATCATGCTTTCTATGCAAACAGAATCTCAACCCCCACGAGGATATTTACATGTACAGGTAAACCTTTTGTTATGAACGGAAGCAGTTCCATGGATTTTGGAGAAGAATTTAATTTACCTTGTTGAATTTGAAGAGCTTTCTGGGATTAATTGAATTTTGGTCCTGTTGACAGGGGAGATCAAGGTTATTGCAGCATAAAGTGTAGGAACCAGCAGATTGAAATTGATGAAAAGACAGAATTAGAAGCTTCCACCAGAAAAATTCTGGCTTCTTTCAGGAAATGTCATAAAAATAAAAATCAAACTCAAACTCAAACTCGGTTGCTTCTACAGGATCTCCGCCGCCAACATAACAGAATTCCCCATACAACAATTCCACCACTTGTTTCG ATGCTTCCCAAATTGGGTAGTCCCTTCAGGATGAAGAACATCAGAAATGGTAAGCTGAGATCAGAAGATGATGAAAATTCCAGAAATTTGAAGGCTGTTGGGTTGGGAACAATTCTTGTTCATCCATCACCACAACAAAATCTAGTGGTCAAACAATCCATAAAACTTACTTTTTCTTCACTTCCACCCAATTCTATCAACAACCCATGTTTTCTCAGATCATGCTTTCTATGCAAACAGAATCTCAACCCCCACGAGGATATTTACATGTACAGGGGAGATCAAGGTTATTGCAGCATAAAGTGTAGGAACCAGCAGATTGAAATTGATGAAAAGACAGAATTAGAAGCTTCCACCAGAAAAATTCTGGCTTCTTTCAGGAAATGTCATAAAAATAAAAATCAAACTCAAACTCAAACTCGGTTGCTTCTACAGGATCTCCGCCGCCAACATAACAGAATTCCCCATACAACAATTCCACCACTTGTTTCG ATGCTTCCCAAATTGGGTAGTCCCTTCAGGATGAAGAACATCAGAAATGGTAAGCTGAGATCAGAAGATGATGAAAATTCCAGAAATTTGAAGGCTGTTGGGTTGGGAACAATTCTTGTTCATCCATCACCACAACAAAATCTAGTGGTCAAACAATCCATAAAACTTACTTTTTCTTCACTTCCACCCAATTCTATCAACAACCCATGTTTTCTCAGATCATGCTTTCTATGCAAACAGAATCTCAACCCCCACGAGGATATTTACATGTACAGGGGAGATCAAGGTTATTGCAGCATAAAGTGTAGGAACCAGCAGATTGAAATTGATGAAAAGACAGAATTAGAAGCTTCCACCAGAAAAATTCTGGCTTCTTTCAGGAAATGTCATAAAAATAAAAATCAAACTCAAACTCAAACTCGGTTGCTTCTACAGGATCTCCGCCGCCAACATAACAGAATTCCCCATACAACAATTCCACCACTTGTTTCG MLPKLGSPFRMKNIRNGKLRSEDDENSRNLKAVGLGTILVHPSPQQNLVVKQSIKLTFSSLPPNSINNPCFLRSCFLCKQNLNPHEDIYMYRGDQGYCSIKCRNQQIEIDEKTELEASTRKILASFRKCHKNKNQTQTQTRLLLQDLRRQHNRIPHTTIPPLVS Homology
BLAST of MS009633 vs. NCBI nr
Match: XP_022964037.1 (uncharacterized protein LOC111464182 [Cucurbita moschata] >XP_023515161.1 uncharacterized protein LOC111779275 [Cucurbita pepo subsp. pepo] >KAG6593580.1 FCS-Like Zinc finger 18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025925.1 Protein MARD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196.4 bits (498), Expect = 1.9e-46 Identity = 107/155 (69.03%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of MS009633 vs. NCBI nr
Match: XP_038896964.1 (FCS-Like Zinc finger 17-like isoform X1 [Benincasa hispida]) HSP 1 Score: 194.1 bits (492), Expect = 9.3e-46 Identity = 109/165 (66.06%), Postives = 130/165 (78.79%), Query Frame = 0
BLAST of MS009633 vs. NCBI nr
Match: XP_004141729.1 (FCS-Like Zinc finger 17 [Cucumis sativus] >KGN45444.1 hypothetical protein Csa_016251 [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 5.1e-44 Identity = 103/164 (62.80%), Postives = 128/164 (78.05%), Query Frame = 0
BLAST of MS009633 vs. NCBI nr
Match: XP_008462244.1 (PREDICTED: uncharacterized protein LOC103500647 [Cucumis melo] >KAA0059360.1 DUF581 family protein [Cucumis melo var. makuwa] >TYK03966.1 DUF581 family protein [Cucumis melo var. makuwa]) HSP 1 Score: 187.6 bits (475), Expect = 8.7e-44 Identity = 103/164 (62.80%), Postives = 127/164 (77.44%), Query Frame = 0
BLAST of MS009633 vs. NCBI nr
Match: XP_038896965.1 (FCS-Like Zinc finger 17-like isoform X2 [Benincasa hispida]) HSP 1 Score: 184.5 bits (467), Expect = 7.4e-43 Identity = 107/165 (64.85%), Postives = 128/165 (77.58%), Query Frame = 0
BLAST of MS009633 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-19 Identity = 49/104 (47.12%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of MS009633 vs. ExPASy Swiss-Prot
Match: P0DO12 (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-19 Identity = 49/104 (47.12%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of MS009633 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 8.5e-10 Identity = 39/125 (31.20%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of MS009633 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 8.5e-10 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 0
BLAST of MS009633 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.5e-09 Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of MS009633 vs. ExPASy TrEMBL
Match: A0A6J1HGR2 (uncharacterized protein LOC111464182 OS=Cucurbita moschata OX=3662 GN=LOC111464182 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 9.1e-47 Identity = 107/155 (69.03%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of MS009633 vs. ExPASy TrEMBL
Match: A0A0A0K9B4 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448060 PE=3 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 2.5e-44 Identity = 103/164 (62.80%), Postives = 128/164 (78.05%), Query Frame = 0
BLAST of MS009633 vs. ExPASy TrEMBL
Match: A0A5D3C0J4 (DUF581 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001630 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.2e-44 Identity = 103/164 (62.80%), Postives = 127/164 (77.44%), Query Frame = 0
BLAST of MS009633 vs. ExPASy TrEMBL
Match: A0A1S3CGJ4 (uncharacterized protein LOC103500647 OS=Cucumis melo OX=3656 GN=LOC103500647 PE=3 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 4.2e-44 Identity = 103/164 (62.80%), Postives = 127/164 (77.44%), Query Frame = 0
BLAST of MS009633 vs. ExPASy TrEMBL
Match: A0A6J1JTJ9 (protein MARD1-like OS=Cucurbita maxima OX=3661 GN=LOC111488741 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39 Identity = 88/135 (65.19%), Postives = 107/135 (79.26%), Query Frame = 0
BLAST of MS009633 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20 Identity = 49/104 (47.12%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of MS009633 vs. TAIR 10
Match: AT1G53903.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20 Identity = 49/104 (47.12%), Postives = 75/104 (72.12%), Query Frame = 0
BLAST of MS009633 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.1 bits (157), Expect = 6.1e-11 Identity = 39/125 (31.20%), Postives = 68/125 (54.40%), Query Frame = 0
BLAST of MS009633 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.1 bits (157), Expect = 6.1e-11 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 0
BLAST of MS009633 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10 Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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