MS009600 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTGTCTTACGAATCTGAACAGCCACAAGACGAAGCCCAATCCCTCCTCCCCTCCGGCCACCGGCGGCCGTATCGCCGCCGCATCCACCTCCGCCGGAGGAGGCTGCCGACGGCCCGCCTCGGAGGGAGAAGGCCGCCGCGAGTGGTGGCGTTTTGGAGGTCATTTAGGGACATCCAAATTAGGAAGTGGCTGATGAGGGTGCGCTGCACGTGCCTCCTCAAAAAGCTTAATCCATTGTTCGGAAAAGGCACCGCCGGCGCCGTCGTTGCTTTTCAGAAAAGGATTCTAATGGAGATTTCGTTGGCCGTTCCTGTTCTTGGCGCCTCTCTCCTCTAC ATGGCTCTGTCTTACGAATCTGAACAGCCACAAGACGAAGCCCAATCCCTCCTCCCCTCCGGCCACCGGCGGCCGTATCGCCGCCGCATCCACCTCCGCCGGAGGAGGCTGCCGACGGCCCGCCTCGGAGGGAGAAGGCCGCCGCGAGTGGTGGCGTTTTGGAGGTCATTTAGGGACATCCAAATTAGGAAGTGGCTGATGAGGGTGCGCTGCACGTGCCTCCTCAAAAAGCTTAATCCATTGTTCGGAAAAGGCACCGCCGGCGCCGTCGTTGCTTTTCAGAAAAGGATTCTAATGGAGATTTCGTTGGCCGTTCCTGTTCTTGGCGCCTCTCTCCTCTAC ATGGCTCTGTCTTACGAATCTGAACAGCCACAAGACGAAGCCCAATCCCTCCTCCCCTCCGGCCACCGGCGGCCGTATCGCCGCCGCATCCACCTCCGCCGGAGGAGGCTGCCGACGGCCCGCCTCGGAGGGAGAAGGCCGCCGCGAGTGGTGGCGTTTTGGAGGTCATTTAGGGACATCCAAATTAGGAAGTGGCTGATGAGGGTGCGCTGCACGTGCCTCCTCAAAAAGCTTAATCCATTGTTCGGAAAAGGCACCGCCGGCGCCGTCGTTGCTTTTCAGAAAAGGATTCTAATGGAGATTTCGTTGGCCGTTCCTGTTCTTGGCGCCTCTCTCCTCTAC MALSYESEQPQDEAQSLLPSGHRRPYRRRIHLRRRRLPTARLGGRRPPRVVAFWRSFRDIQIRKWLMRVRCTCLLKKLNPLFGKGTAGAVVAFQKRILMEISLAVPVLGASLLY Homology
BLAST of MS009600 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30 Identity = 81/120 (67.50%), Postives = 90/120 (75.00%), Query Frame = 0
BLAST of MS009600 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.9 bits (346), Expect = 5.5e-29 Identity = 76/111 (68.47%), Postives = 84/111 (75.68%), Query Frame = 0
BLAST of MS009600 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.9 bits (346), Expect = 5.5e-29 Identity = 76/111 (68.47%), Postives = 84/111 (75.68%), Query Frame = 0
BLAST of MS009600 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa]) HSP 1 Score: 104.4 bits (259), Expect = 6.7e-19 Identity = 66/116 (56.90%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of MS009600 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus]) HSP 1 Score: 97.4 bits (241), Expect = 8.2e-17 Identity = 59/113 (52.21%), Postives = 76/113 (67.26%), Query Frame = 0
BLAST of MS009600 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.3e-19 Identity = 66/116 (56.90%), Postives = 80/116 (68.97%), Query Frame = 0
BLAST of MS009600 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 8.0e-18 Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 0
BLAST of MS009600 vs. ExPASy TrEMBL
Match: A0A5N6QI76 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003523 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08 Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 0
BLAST of MS009600 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.6e-08 Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of MS009600 vs. ExPASy TrEMBL
Match: A0A6P3Z3H6 (uncharacterized protein LOC107406823 OS=Ziziphus jujuba OX=326968 GN=LOC107406823 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 9.8e-08 Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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