MS009519 (gene) Bitter gourd (TR) v1

Overview


Name	MS009519
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein transport protein SEC13
Location	scaffold813: 1860446 .. 1861297 (-)
RNA-Seq Expression	MS009519
Synteny	MS009519

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGATGGATTATTATGGCAAGCGCCTTGCAACAGCTTCATCCGATCAGACCATTAAGATAATTGGAGTCAGCAACTCAGCTTCTCAGCATCTAGCCACGCTTACTGGTCACCAAGGACCAGTTTGGCAGGCTGCTTGGGCGCACCCAAAATTCGGGTCGTTATTGGCTTCGTGTTCTTATGATGGACGTGTGATTATATGGAAGGAAGGCAATCAGAATGAATGGACTCAAGCTCATGTTTTTGATGATCACAAATCATCGGTTAATTCTATCGCTTGGGCTCCTCACGAATTGGGTCTATGTTTGGCGTGTGGTTCGTCTGATGGGAATATCTCAGTATTCACCGCAAGGCAGGATGGTGGTTGGGATACATCGAGGATCGACCAAGCTCACCCACTAGGTGTTACTTCAGTTTCATGGGCCCCTTCGACTGCACCCGGTGCTCTTGTTGGTTCTGGCTTGGTTGATCCTGTACTAAAGCTTTGCTCTGGTGGTTGTGATAATACTGTGAAGGTTTGGAAACCATATAATGGAGTTTGGAAGATGGACTGTTTCCCTGCACTTCAAATGCACACTGATTGGGTTAGGGATGTTGCATGGGCGCCTAATCTTGGACTACCGAAATCTACTATTGCAAGTGCTTCTCAGGATGGAAAAGTTATTATATGGACGGTTGCCAGAGAAGGGGATCAATGGGAAGGTAAGATATTGAATGACTTCAAAACTCCTGTCTGGAGGGTCTCATGGTCTTTGACTGGAAACATCTTGGCCGTGGCTGATGGGAACAACAATGTGACTTTGTGGAAGGAAGCTGTTGATGGGGACTGGCAACAGGTGACAACCGTAGAGCCA

mRNA sequence

GCGATGGATTATTATGGCAAGCGCCTTGCAACAGCTTCATCCGATCAGACCATTAAGATAATTGGAGTCAGCAACTCAGCTTCTCAGCATCTAGCCACGCTTACTGGTCACCAAGGACCAGTTTGGCAGGCTGCTTGGGCGCACCCAAAATTCGGGTCGTTATTGGCTTCGTGTTCTTATGATGGACGTGTGATTATATGGAAGGAAGGCAATCAGAATGAATGGACTCAAGCTCATGTTTTTGATGATCACAAATCATCGGTTAATTCTATCGCTTGGGCTCCTCACGAATTGGGTCTATGTTTGGCGTGTGGTTCGTCTGATGGGAATATCTCAGTATTCACCGCAAGGCAGGATGGTGGTTGGGATACATCGAGGATCGACCAAGCTCACCCACTAGGTGTTACTTCAGTTTCATGGGCCCCTTCGACTGCACCCGGTGCTCTTGTTGGTTCTGGCTTGGTTGATCCTGTACTAAAGCTTTGCTCTGGTGGTTGTGATAATACTGTGAAGGTTTGGAAACCATATAATGGAGTTTGGAAGATGGACTGTTTCCCTGCACTTCAAATGCACACTGATTGGGTTAGGGATGTTGCATGGGCGCCTAATCTTGGACTACCGAAATCTACTATTGCAAGTGCTTCTCAGGATGGAAAAGTTATTATATGGACGGTTGCCAGAGAAGGGGATCAATGGGAAGGTAAGATATTGAATGACTTCAAAACTCCTGTCTGGAGGGTCTCATGGTCTTTGACTGGAAACATCTTGGCCGTGGCTGATGGGAACAACAATGTGACTTTGTGGAAGGAAGCTGTTGATGGGGACTGGCAACAGGTGACAACCGTAGAGCCA

Coding sequence (CDS)

GCGATGGATTATTATGGCAAGCGCCTTGCAACAGCTTCATCCGATCAGACCATTAAGATAATTGGAGTCAGCAACTCAGCTTCTCAGCATCTAGCCACGCTTACTGGTCACCAAGGACCAGTTTGGCAGGCTGCTTGGGCGCACCCAAAATTCGGGTCGTTATTGGCTTCGTGTTCTTATGATGGACGTGTGATTATATGGAAGGAAGGCAATCAGAATGAATGGACTCAAGCTCATGTTTTTGATGATCACAAATCATCGGTTAATTCTATCGCTTGGGCTCCTCACGAATTGGGTCTATGTTTGGCGTGTGGTTCGTCTGATGGGAATATCTCAGTATTCACCGCAAGGCAGGATGGTGGTTGGGATACATCGAGGATCGACCAAGCTCACCCACTAGGTGTTACTTCAGTTTCATGGGCCCCTTCGACTGCACCCGGTGCTCTTGTTGGTTCTGGCTTGGTTGATCCTGTACTAAAGCTTTGCTCTGGTGGTTGTGATAATACTGTGAAGGTTTGGAAACCATATAATGGAGTTTGGAAGATGGACTGTTTCCCTGCACTTCAAATGCACACTGATTGGGTTAGGGATGTTGCATGGGCGCCTAATCTTGGACTACCGAAATCTACTATTGCAAGTGCTTCTCAGGATGGAAAAGTTATTATATGGACGGTTGCCAGAGAAGGGGATCAATGGGAAGGTAAGATATTGAATGACTTCAAAACTCCTGTCTGGAGGGTCTCATGGTCTTTGACTGGAAACATCTTGGCCGTGGCTGATGGGAACAACAATGTGACTTTGTGGAAGGAAGCTGTTGATGGGGACTGGCAACAGGTGACAACCGTAGAGCCA

Protein sequence

AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSYDGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDGGWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP

Homology

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BLAST of MS009519 vs. NCBI nr
Match: XP_022152847.1 (protein transport protein SEC13 homolog B-like [Momordica charantia])

HSP 1 Score: 611.7 bits (1576), Expect = 3.2e-171
Identity = 283/284 (99.65%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG
Sbjct: 78  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW
Sbjct: 138 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KTPVWRVSWSLTGNILAVADGNNNV+LWKEAVDGDWQQVTTVEP
Sbjct: 258 KTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVTTVEP 301

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BLAST of MS009519 vs. NCBI nr
Match: XP_038900239.1 (protein transport protein SEC13 homolog B-like [Benincasa hispida] >XP_038900240.1 protein transport protein SEC13 homolog B-like [Benincasa hispida])

HSP 1 Score: 604.7 bits (1558), Expect = 4.0e-169
Identity = 278/284 (97.89%), Postives = 283/284 (99.65%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           AMDYYGKRLATASSDQTIKIIGVSNSASQHLATL+GHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLSGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG
Sbjct: 78  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWD SRIDQAHPLGVTSVSWAPS+APGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNG+W
Sbjct: 138 GWDASRIDQAHPLGVTSVSWAPSSAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGIW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KTPVWRVSWSLTGNILAVADGNN+VTLWKE+VDGDWQQVTTVEP
Sbjct: 258 KTPVWRVSWSLTGNILAVADGNNDVTLWKESVDGDWQQVTTVEP 301

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BLAST of MS009519 vs. NCBI nr
Match: XP_008462440.1 (PREDICTED: protein transport protein SEC13 homolog B-like [Cucumis melo] >KAA0051036.1 protein transport protein SEC13-like protein B-like [Cucumis melo var. makuwa] >TYK03831.1 protein transport protein SEC13-like protein B-like [Cucumis melo var. makuwa])

HSP 1 Score: 600.9 bits (1548), Expect = 5.7e-168
Identity = 276/284 (97.18%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           +MDYYGKRLAT SSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  SMDYYGKRLATVSSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEW+QAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG
Sbjct: 78  DGRVIIWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWDTSRIDQAHPLGVTSVSWAPS+APGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNG+W
Sbjct: 138 GWDTSRIDQAHPLGVTSVSWAPSSAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGIW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KT VWRVSWSLTGNILAVADGNN+VTLWKE+VDGDWQQVTTVEP
Sbjct: 258 KTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVEP 301

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BLAST of MS009519 vs. NCBI nr
Match: XP_004141658.1 (protein transport protein SEC13 homolog B [Cucumis sativus] >XP_031745211.1 protein transport protein SEC13 homolog B [Cucumis sativus] >KGN45591.1 hypothetical protein Csa_016097 [Cucumis sativus])

HSP 1 Score: 600.5 bits (1547), Expect = 7.5e-168
Identity = 276/284 (97.18%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           +MDYYGKRLAT SSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  SMDYYGKRLATVSSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG
Sbjct: 78  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWDTSRIDQAHPLGVTSVSWAPS+APGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNG+W
Sbjct: 138 GWDTSRIDQAHPLGVTSVSWAPSSAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGIW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKIL+DF
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILSDF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KT VWRVSWSLTGNILAVADGNN+VTLWKE+VDGDWQQVTTVEP
Sbjct: 258 KTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVEP 301

[Close]

BLAST of MS009519 vs. NCBI nr
Match: XP_023548958.1 (protein transport protein SEC13 homolog B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 598.6 bits (1542), Expect = 2.8e-167
Identity = 275/283 (97.17%), Postives = 280/283 (98.94%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSYD 61
           MDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSYD
Sbjct: 19  MDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSYD 78

Query: 62  GRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDGG 121
           GRVIIWKEGNQNEW+QAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDGG
Sbjct: 79  GRVIIWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDGG 138

Query: 122 WDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVWK 181
           WDTS IDQAHPLGVTSVSWAPS+APGALVGSGLVDPV KLCSGGCDNTVKVWKPYNG+WK
Sbjct: 139 WDTSSIDQAHPLGVTSVSWAPSSAPGALVGSGLVDPVHKLCSGGCDNTVKVWKPYNGIWK 198

Query: 182 MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDFK 241
           MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDG+VIIWTVAREGDQWEGKILNDFK
Sbjct: 199 MDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGQVIIWTVAREGDQWEGKILNDFK 258

Query: 242 TPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           TPVWRVSWS+TGNILAVADGNNNVTLWKE VDGDWQQVTTVEP
Sbjct: 259 TPVWRVSWSMTGNILAVADGNNNVTLWKEDVDGDWQQVTTVEP 301

[Close]

BLAST of MS009519 vs. ExPASy Swiss-Prot
Match: O64740 (Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC13B PE=1 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 7.3e-150
Identity = 240/284 (84.51%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNS-ASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 61
           MDYYGKR+ATASSD TIKI GVSN+  SQ LATLTGH+GPVW+ AWAHPK+GS+LASCSY
Sbjct: 19  MDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPKYGSILASCSY 78

Query: 62  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 121
           DG+VI+WKEGNQN+WTQ HVF DHKSSVNSIAWAPH++GL LACGSSDGNISVFTAR DG
Sbjct: 79  DGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGNISVFTARADG 138

Query: 122 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 181
           GWDTSRIDQAHP+GVTSVSWAP+TAPGALV SGL+DPV KL SGGCDNTVKVWK  NG W
Sbjct: 139 GWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLASGGCDNTVKVWKLANGSW 198

Query: 182 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 241
           KMDCFPALQ HTDWVRDVAWAPNLGLPKSTIAS SQDGKVIIWTV +EG+QWEGK+L DF
Sbjct: 199 KMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIWTVGKEGEQWEGKVLKDF 258

Query: 242 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
            TPVWRVSWSLTGN+LAV+DGNNNVT+WKEAVDG+W+QVT VEP
Sbjct: 259 MTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAVEP 302

[Close]

BLAST of MS009519 vs. ExPASy Swiss-Prot
Match: Q9SRI1 (Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC13A PE=1 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 3.1e-148
Identity = 235/284 (82.75%), Postives = 261/284 (91.90%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNS-ASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 61
           MDYYGKR+ATASSD TIKI GVSNS  SQHLATLTGH+GPVWQ AWAHPKFGSLLASCSY
Sbjct: 19  MDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPKFGSLLASCSY 78

Query: 62  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 121
           DG++I+WKEGNQN+WTQAHVF DHK SVNSIAWAPHELGL LACG+SDGNISVF+AR DG
Sbjct: 79  DGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNISVFSARADG 138

Query: 122 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 181
           GWDT++IDQAHP+GVTSVSWAP+T PGALV SG++DPV KL SGGCD+TVKVWK  NG W
Sbjct: 139 GWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLASGGCDSTVKVWKFSNGSW 198

Query: 182 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 241
           KMDCFPAL  HTDWVRDVAWAPNLGLPKSTIAS S+DGKVIIWT+ +EG+QWEG +L DF
Sbjct: 199 KMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGEQWEGTVLKDF 258

Query: 242 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KTPVWRVSWSLTGN+LAV+DGNNNVT+WKE+VDG+W+QVT VEP
Sbjct: 259 KTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVVEP 302

[Close]

BLAST of MS009519 vs. ExPASy Swiss-Prot
Match: Q9D1M0 (Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3)

HSP 1 Score: 332.8 bits (852), Expect = 3.8e-90
Identity = 154/286 (53.85%), Postives = 197/286 (68.88%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSYD 61
           MDYYG RLAT SSD+++KI  V N     +A L GH+GPVWQ AWAHP +G++LASCSYD
Sbjct: 21  MDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD 80

Query: 62  GRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDGG 121
            +VIIWKE N   W + H    H SSVNS+ WAPH+ GL LACGSSDG IS+ T   +G 
Sbjct: 81  RKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ 140

Query: 122 WDTSRIDQAHPLGVTSVSWAPSTAPGALV---GSGLVDPVLKLCSGGCDNTVKVWK-PYN 181
           W+  +I+ AH +G  +VSWAP+  PG+L+        + + K  SGGCDN +K+W+   +
Sbjct: 141 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEED 200

Query: 182 GVWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTV-AREGDQWEGKI 241
           G WK +    L+ H+DWVRDVAWAP++GLP STIAS SQDG+V IWT     G+ W  K+
Sbjct: 201 GQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKL 260

Query: 242 LNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTV 283
           L+ F   VW VSWS+T NILAV+ G+N VTLWKE+VDG W  ++ V
Sbjct: 261 LHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of MS009519 vs. ExPASy Swiss-Prot
Match: Q5XFW8 (Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.8e-90
Identity = 154/286 (53.85%), Postives = 197/286 (68.88%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSYD 61
           MDYYG RLAT SSD+++KI  V N     +A L GH+GPVWQ AWAHP +G++LASCSYD
Sbjct: 21  MDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD 80

Query: 62  GRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDGG 121
            +VIIWKE N   W + H    H SSVNS+ WAPH+ GL LACGSSDG IS+ T   +G 
Sbjct: 81  RKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ 140

Query: 122 WDTSRIDQAHPLGVTSVSWAPSTAPGALV---GSGLVDPVLKLCSGGCDNTVKVWK-PYN 181
           W+  +I+ AH +G  +VSWAP+  PG+L+        + + K  SGGCDN +K+W+   +
Sbjct: 141 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEED 200

Query: 182 GVWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTV-AREGDQWEGKI 241
           G WK +    L+ H+DWVRDVAWAP++GLP STIAS SQDG+V IWT     G+ W  K+
Sbjct: 201 GQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKL 260

Query: 242 LNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTV 283
           L+ F   VW VSWS+T NILAV+ G+N VTLWKE+VDG W  ++ V
Sbjct: 261 LHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of MS009519 vs. ExPASy Swiss-Prot
Match: Q3ZCC9 (Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.5e-89
Identity = 154/286 (53.85%), Postives = 196/286 (68.53%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSYD 61
           MDYYG RLAT SSD+++KI  V N     +A L GH+GPVWQ AWAHP +G++LASCSYD
Sbjct: 21  MDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYD 80

Query: 62  GRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDGG 121
            +VIIWKE N   W + H    H SSVNS+ WAPH+ GL LACGSSDG IS+ T    G 
Sbjct: 81  RKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQ 140

Query: 122 WDTSRIDQAHPLGVTSVSWAPSTAPGALV---GSGLVDPVLKLCSGGCDNTVKVWK-PYN 181
           W+  +I+ AH +G  +VSWAP+  PG+L+        + + K  SGGCDN +K+WK   +
Sbjct: 141 WEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEED 200

Query: 182 GVWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTV-AREGDQWEGKI 241
           G WK +    L+ H+DWVRDVAWAP++GLP STIAS SQDG+V +WT     G+ W  K+
Sbjct: 201 GQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKL 260

Query: 242 LNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTV 283
           L+ F   VW VSWS+T NILAV+ G+N VTLWKE+VDG W  ++ V
Sbjct: 261 LHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303

[Close]

BLAST of MS009519 vs. ExPASy TrEMBL
Match: A0A6J1DHD2 (protein transport protein SEC13 homolog B-like OS=Momordica charantia OX=3673 GN=LOC111020468 PE=3 SV=1)

HSP 1 Score: 611.7 bits (1576), Expect = 1.6e-171
Identity = 283/284 (99.65%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG
Sbjct: 78  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW
Sbjct: 138 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KTPVWRVSWSLTGNILAVADGNNNV+LWKEAVDGDWQQVTTVEP
Sbjct: 258 KTPVWRVSWSLTGNILAVADGNNNVSLWKEAVDGDWQQVTTVEP 301

[Close]

BLAST of MS009519 vs. ExPASy TrEMBL
Match: A0A5A7UA12 (Protein transport protein SEC13-like protein B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00230 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 2.8e-168
Identity = 276/284 (97.18%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           +MDYYGKRLAT SSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  SMDYYGKRLATVSSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEW+QAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG
Sbjct: 78  DGRVIIWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWDTSRIDQAHPLGVTSVSWAPS+APGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNG+W
Sbjct: 138 GWDTSRIDQAHPLGVTSVSWAPSSAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGIW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KT VWRVSWSLTGNILAVADGNN+VTLWKE+VDGDWQQVTTVEP
Sbjct: 258 KTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVEP 301

[Close]

BLAST of MS009519 vs. ExPASy TrEMBL
Match: A0A1S3CHH1 (protein transport protein SEC13 homolog B-like OS=Cucumis melo OX=3656 GN=LOC103500788 PE=3 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 2.8e-168
Identity = 276/284 (97.18%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           +MDYYGKRLAT SSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  SMDYYGKRLATVSSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEW+QAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG
Sbjct: 78  DGRVIIWKEGNQNEWSQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWDTSRIDQAHPLGVTSVSWAPS+APGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNG+W
Sbjct: 138 GWDTSRIDQAHPLGVTSVSWAPSSAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGIW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KT VWRVSWSLTGNILAVADGNN+VTLWKE+VDGDWQQVTTVEP
Sbjct: 258 KTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVEP 301

[Close]

BLAST of MS009519 vs. ExPASy TrEMBL
Match: A0A0A0KCU3 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G452950 PE=3 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 3.6e-168
Identity = 276/284 (97.18%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           +MDYYGKRLAT SSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  SMDYYGKRLATVSSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG
Sbjct: 78  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWDTSRIDQAHPLGVTSVSWAPS+APGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNG+W
Sbjct: 138 GWDTSRIDQAHPLGVTSVSWAPSSAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGIW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKIL+DF
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILSDF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KT VWRVSWSLTGNILAVADGNN+VTLWKE+VDGDWQQVTTVEP
Sbjct: 258 KTAVWRVSWSLTGNILAVADGNNSVTLWKESVDGDWQQVTTVEP 301

[Close]

BLAST of MS009519 vs. ExPASy TrEMBL
Match: A0A6J1KFQ3 (protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LOC111494631 PE=3 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.3e-165
Identity = 272/284 (95.77%), Postives = 279/284 (98.24%), Query Frame = 0


Query: 1   AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 60
           AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY
Sbjct: 18  AMDYYGKRLATASSDQTIKIIGVSNSASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 77

Query: 61  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 120
           DGRVIIWKEGNQNEWTQAHVF +HKSSVNSIAWAPHE+GLCLACGSSDGNISVFTAR DG
Sbjct: 78  DGRVIIWKEGNQNEWTQAHVFYEHKSSVNSIAWAPHEVGLCLACGSSDGNISVFTARPDG 137

Query: 121 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 180
           GWDTSRIDQAHPLGVTSVSWAPS+APGALVGSG VDPV KLCSGGCDNTVKVWKPYNG+W
Sbjct: 138 GWDTSRIDQAHPLGVTSVSWAPSSAPGALVGSGFVDPVQKLCSGGCDNTVKVWKPYNGIW 197

Query: 181 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 240
           KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGK+LN+F
Sbjct: 198 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKVLNNF 257

Query: 241 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           +TPVWRVSWSLTGNILAVADGNN VTLWKEAVDGDWQQVTTVEP
Sbjct: 258 QTPVWRVSWSLTGNILAVADGNNAVTLWKEAVDGDWQQVTTVEP 301

[Close]

BLAST of MS009519 vs. TAIR 10
Match: AT2G30050.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 531.2 bits (1367), Expect = 5.2e-151
Identity = 240/284 (84.51%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNS-ASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 61
           MDYYGKR+ATASSD TIKI GVSN+  SQ LATLTGH+GPVW+ AWAHPK+GS+LASCSY
Sbjct: 19  MDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPKYGSILASCSY 78

Query: 62  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 121
           DG+VI+WKEGNQN+WTQ HVF DHKSSVNSIAWAPH++GL LACGSSDGNISVFTAR DG
Sbjct: 79  DGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGNISVFTARADG 138

Query: 122 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 181
           GWDTSRIDQAHP+GVTSVSWAP+TAPGALV SGL+DPV KL SGGCDNTVKVWK  NG W
Sbjct: 139 GWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLASGGCDNTVKVWKLANGSW 198

Query: 182 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 241
           KMDCFPALQ HTDWVRDVAWAPNLGLPKSTIAS SQDGKVIIWTV +EG+QWEGK+L DF
Sbjct: 199 KMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIWTVGKEGEQWEGKVLKDF 258

Query: 242 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
            TPVWRVSWSLTGN+LAV+DGNNNVT+WKEAVDG+W+QVT VEP
Sbjct: 259 MTPVWRVSWSLTGNLLAVSDGNNNVTVWKEAVDGEWEQVTAVEP 302

[Close]

BLAST of MS009519 vs. TAIR 10
Match: AT3G01340.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 525.8 bits (1353), Expect = 2.2e-149
Identity = 235/284 (82.75%), Postives = 261/284 (91.90%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNS-ASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 61
           MDYYGKR+ATASSD TIKI GVSNS  SQHLATLTGH+GPVWQ AWAHPKFGSLLASCSY
Sbjct: 19  MDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPKFGSLLASCSY 78

Query: 62  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 121
           DG++I+WKEGNQN+WTQAHVF DHK SVNSIAWAPHELGL LACG+SDGNISVF+AR DG
Sbjct: 79  DGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNISVFSARADG 138

Query: 122 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 181
           GWDT++IDQAHP+GVTSVSWAP+T PGALV SG++DPV KL SGGCD+TVKVWK  NG W
Sbjct: 139 GWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLASGGCDSTVKVWKFSNGSW 198

Query: 182 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 241
           KMDCFPAL  HTDWVRDVAWAPNLGLPKSTIAS S+DGKVIIWT+ +EG+QWEG +L DF
Sbjct: 199 KMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGEQWEGTVLKDF 258

Query: 242 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KTPVWRVSWSLTGN+LAV+DGNNNVT+WKE+VDG+W+QVT VEP
Sbjct: 259 KTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVVEP 302

[Close]

BLAST of MS009519 vs. TAIR 10
Match: AT3G01340.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 525.8 bits (1353), Expect = 2.2e-149
Identity = 235/284 (82.75%), Postives = 261/284 (91.90%), Query Frame = 0


Query: 2   MDYYGKRLATASSDQTIKIIGVSNS-ASQHLATLTGHQGPVWQAAWAHPKFGSLLASCSY 61
           MDYYGKR+ATASSD TIKI GVSNS  SQHLATLTGH+GPVWQ AWAHPKFGSLLASCSY
Sbjct: 19  MDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPKFGSLLASCSY 78

Query: 62  DGRVIIWKEGNQNEWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVFTARQDG 121
           DG++I+WKEGNQN+WTQAHVF DHK SVNSIAWAPHELGL LACG+SDGNISVF+AR DG
Sbjct: 79  DGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNISVFSARADG 138

Query: 122 GWDTSRIDQAHPLGVTSVSWAPSTAPGALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVW 181
           GWDT++IDQAHP+GVTSVSWAP+T PGALV SG++DPV KL SGGCD+TVKVWK  NG W
Sbjct: 139 GWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLASGGCDSTVKVWKFSNGSW 198

Query: 182 KMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIWTVAREGDQWEGKILNDF 241
           KMDCFPAL  HTDWVRDVAWAPNLGLPKSTIAS S+DGKVIIWT+ +EG+QWEG +L DF
Sbjct: 199 KMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGEQWEGTVLKDF 258

Query: 242 KTPVWRVSWSLTGNILAVADGNNNVTLWKEAVDGDWQQVTTVEP 285
           KTPVWRVSWSLTGN+LAV+DGNNNVT+WKE+VDG+W+QVT VEP
Sbjct: 259 KTPVWRVSWSLTGNLLAVSDGNNNVTVWKESVDGEWEQVTVVEP 302

[Close]

BLAST of MS009519 vs. TAIR 10
Match: AT1G64350.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-17
Identity = 78/313 (24.92%), Postives = 128/313 (40.89%), Query Frame = 0


Query: 6   GKRLATASSDQTIKIIGVSNSASQHLATLTG---HQGPVWQAAWAHPKFGSLLASCSYDG 65
           G RLA  S +  + I   S S+S   +  +     +  + +  W   ++G  +A    DG
Sbjct: 21  GDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDG 80

Query: 66  RVIIWKEGNQN----EWTQAHVFDDHKSSVNSIAWAPHELGLCLACGSSDGNISVF---T 125
            + IW+E +++    EW       +  S V  + +      L +    SDG + VF    
Sbjct: 81  SLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLN 140

Query: 126 ARQDGGWDTSR-----IDQAHPLG-----VTSVSWAP----STAPGALVGSGLVDPVLKL 185
             +   W         ID    LG       SVSW P       P  ++      P L  
Sbjct: 141 PLELKNWQLQAEFQNVIDSLSTLGKPSSLSASVSWNPMKGEEQEPSFVLAFNSDSPHL-- 200

Query: 186 CSGGCDNTVKVWK--PYNGVWKMDCFPAL-QMHTDWVRDVAWAPNLGLPKSTIASASQDG 245
                 N+ K+W+    +  W      AL +   D V  ++WAPN+G P   +A A+  G
Sbjct: 201 ------NSSKIWEFDEAHNRWLAVAELALPEDKGDPVYALSWAPNIGRPYEVVAVATHKG 260

Query: 246 KVIIWTVAREGDQWEGKI-------LNDFKTPVWRVSWSLTGNILAVADGNNNVTLWKEA 285
            + IW V    D  EG++       L+  +  VW++ W ++G  LA    +  V LW+  
Sbjct: 261 -IGIWHVGLAPD-LEGRLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSN 320

[Close]

BLAST of MS009519 vs. TAIR 10
Match: AT2G26060.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-17
Identity = 68/247 (27.53%), Postives = 105/247 (42.51%), Query Frame = 0


Query: 34  LTGHQGPVWQAAW----AHPK-FGSLLASCSYDGRVIIWKEGN-QNEWTQAHVFDD-HKS 93
           L GH   VW  AW    +H      +LASCS D  V IW++ +    WT   V ++ H  
Sbjct: 16  LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75

Query: 94  SVNSIAWAPHELGLCLACGSSDGNISVFTARQDGGWDTSRIDQAHPLGVTSVSWAPSTAP 153
           +V S AW+P   G  LA  S DG   ++       ++     + H   V SVSW  S   
Sbjct: 76  TVRSCAWSPS--GQLLATASFDGTTGIW-KNYGSEFECISTLEGHENEVKSVSWNAS--- 135

Query: 154 GALVGSGLVDPVLKLCSGGCDNTVKVWKPYNGVWKMDCFPALQMHTDWVRDVAWAPNLGL 213
               GS      L  CS   D +V +W+   G  + DC   L  HT  V+ V W P +  
Sbjct: 136 ----GS-----CLATCSR--DKSVWIWEVLEGN-EYDCAAVLTGHTQDVKMVQWHPTM-- 195

Query: 214 PKSTIASASQDGKVIIWTVAREGDQWE-----GKILNDFKTPVWRVSWSLTGNILAVADG 269
               + S S D  + +W    +  +++     G+  N   + VW +S++  G+ +     
Sbjct: 196 --DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSD 240

The following BLAST results are available for this feature:

BLAST of MS009519 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152847.1	3.2e-171	99.65	protein transport protein SEC13 homolog B-like [Momordica charantia]	[more]
XP_038900239.1	4.0e-169	97.89	protein transport protein SEC13 homolog B-like [Benincasa hispida] >XP_038900240...	[more]
XP_008462440.1	5.7e-168	97.18	PREDICTED: protein transport protein SEC13 homolog B-like [Cucumis melo] >KAA005...	[more]
XP_004141658.1	7.5e-168	97.18	protein transport protein SEC13 homolog B [Cucumis sativus] >XP_031745211.1 prot...	[more]
XP_023548958.1	2.8e-167	97.17	protein transport protein SEC13 homolog B-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS009519 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64740	7.3e-150	84.51	Protein transport protein SEC13 homolog B OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9SRI1	3.1e-148	82.75	Protein transport protein SEC13 homolog A OS=Arabidopsis thaliana OX=3702 GN=SEC...	[more]
Q9D1M0	3.8e-90	53.85	Protein SEC13 homolog OS=Mus musculus OX=10090 GN=Sec13 PE=1 SV=3	[more]
Q5XFW8	3.8e-90	53.85	Protein SEC13 homolog OS=Rattus norvegicus OX=10116 GN=Sec13 PE=1 SV=1	[more]
Q3ZCC9	2.5e-89	53.85	Protein SEC13 homolog OS=Bos taurus OX=9913 GN=SEC13 PE=2 SV=1	[more]

BLAST of MS009519 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHD2	1.6e-171	99.65	protein transport protein SEC13 homolog B-like OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7UA12	2.8e-168	97.18	Protein transport protein SEC13-like protein B-like OS=Cucumis melo var. makuwa ...	[more]
A0A1S3CHH1	2.8e-168	97.18	protein transport protein SEC13 homolog B-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KCU3	3.6e-168	97.18	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G...	[more]
A0A6J1KFQ3	1.3e-165	95.77	protein transport protein SEC13 homolog B-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of MS009519 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30050.1	5.2e-151	84.51	transducin family protein / WD-40 repeat family protein	[more]
AT3G01340.1	2.2e-149	82.75	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G01340.2	2.2e-149	82.75	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G64350.1	2.6e-17	24.92	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G26060.1	2.6e-17	27.53	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 211..225 score: 32.41 coord: 55..69 score: 35.5 coord: 161..175 score: 36.87
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 181..224 e-value: 2.5E-4 score: 30.4 coord: 230..269 e-value: 0.18 score: 20.9 coord: 27..68 e-value: 5.1E-7 score: 39.3 coord: 74..115 e-value: 1.5E-4 score: 31.1 coord: 121..174 e-value: 0.047 score: 22.8
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 29..68 e-value: 1.3E-4 score: 22.7 coord: 78..114 e-value: 0.023 score: 15.6 coord: 129..174 e-value: 0.044 score: 14.7 coord: 189..223 e-value: 0.055 score: 14.4
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 188..225 score: 10.541869
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 34..68 score: 9.639578
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..284 e-value: 2.7E-96 score: 323.9
None	No IPR available	PANTHER	PTHR11024:SF16	PROTEIN TRANSPORT PROTEIN SEC13 HOMOLOG B-LIKE	coord: 1..283
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 188..225 score: 8.861059
IPR037363	Sec13/Seh1 family	PANTHER	PTHR11024	NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER	coord: 1..283
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 3..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009519.1	MS009519.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005198	structural molecule activity