MS009516 (gene) Bitter gourd (TR) v1

Overview


Name	MS009516
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Nuclear pore complex protein NUP35
Location	scaffold813: 1843514 .. 1845522 (-)
RNA-Seq Expression	MS009516
Synteny	MS009516

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACACCACTTTGCATAGAACTCCCAACTCGGGGAGGCAGTCAATGTTCTACCAAGATTTAGCATCTCCTGTTACCTCGCGAAAAGGGAAATTTTCAACTCCAGGCCAGGCGGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCACCAGTTTTTACCTTGGAAGACCGCTCAGATTTCTCTCCTGAGTCTGGCATTCCTGATTATCCTCTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCAATCCAAAGTCACGACTTCTCTTCACCGATGAAAAACAAGTCAAATGCCAGCACTTCGTATACACCAACTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGATTTAGTTGGTGGTCAACATCAAAAGGTGGTGGCAGTGAGCAAGAAGATAAAGGAAAAAGTTCCCCAGTCGAAGGTGTGGTTCAGCCTGGTGCTTTAATCATTCTTCCAACCCCAAGGGAAGTTGCCAGACCAGAAGTGCAGAGAAATTGCTTCCCTGCTGGAAAACTCAACGAGGAAGAATGGGTTACTGTCTATGGGTAAGTCCTCTTTCGAATGATGCATTTATCGTCTTTGAGTTGTTATGCATTGTTGATGATTACGGATTATTTTAGTCTAGACATGAAACAGCTAACCATTTTGAGCTCATCTTTCTACCTTGGCTACTTTATGGTATATTCAGTATTGCCTAGCCTTTTCTCTCGGGTGCATCTCTTTCTCTCTCACACATGCATGCGTGCACATGCACACACTACTTCCATCACATATGATAGCATACCCGTGGATTGAACACTGCTGCAAGTAATCGCTATAACATTGAACATCTTCAATTTGGAACTGTTGTAAGCTCATCTTTCTATCTTGGCTACTTTGTTGTTCAAATGGGTGAGTCTTCTTATATATTTCAATTGTTTTGACATGGTAGGTTTGTTCCCTCTGCTTTAGATCTACCTCTATGTTAGTGCTGCAGTAAGCTATTGAAGTTATCGATTCTGATATGCGCAATTTCAGTTGTTAGTATTTAGTATTTGATACAATACAAATCAATGTGATTATTGATTCCAGGTGTTATTTGCATAATGTTGTGCCTTCTTTCTTCAGATTCTCCCCTGCTGATACAAATCTAGTTTTGAGGGAATTCGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGGTACCAAACCACCACTGTTTACCTGCTTTATTTGACTTTGTTTGATGTTCTTTTTCTCACTCTTCCCGTCAATGTTGTCGTGTTTAAGATTGGAATGACTTGGTTGCTAGTTAGTAAAATTTTGGTAACATGATAATCATGTATTTTGAAATAATTGCAAAATATATTCACCTTCGCAAGTAAAGATTAAAGAGTTTTAAAATTATGATTGATTTATATGTTGTTAGGTTTTGTGATTTAATTGACACTTGCTGAGTGTTTTATTTGATTAGTAACCTTATCAAATCAATACATAACGTTGGATCAATGGGAAAATATATATTATATTATGTATATGTAATTGATACAGTATCCATATATAAACAGAAAGATGCTAGGTTCGAATTGATCTATATTCAACCTATTAGAAAAACTCCTTGAGTTTTTAATATGTTGTTTCATTTGTTGCTGGTGGCTGGTGCAGAACCGATCTGATGCCCACAAAGCTCTCAACAAAAATGGCGTTCAAATTAACGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCGATGCACCGGCAGGCACTCGACGAAAAGATAAATAATCCAGGATTCATGGTTATCCCTCCGGTGCCTTCTAGAACCACAGAACTCCTTGCAACGAGAGGGCCTGTGCGTACCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCGGGAGGTACCATTGCTTCGCCATCGAAATCGTTGGTGTCTAAGGTCATGGATTTGATGTTTGGAGTC

mRNA sequence

ATGAACACCACTTTGCATAGAACTCCCAACTCGGGGAGGCAGTCAATGTTCTACCAAGATTTAGCATCTCCTGTTACCTCGCGAAAAGGGAAATTTTCAACTCCAGGCCAGGCGGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCACCAGTTTTTACCTTGGAAGACCGCTCAGATTTCTCTCCTGAGTCTGGCATTCCTGATTATCCTCTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCAATCCAAAGTCACGACTTCTCTTCACCGATGAAAAACAAGTCAAATGCCAGCACTTCGTATACACCAACTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGATTTAGTTGGTGGTCAACATCAAAAGGTGGTGGCAGTGAGCAAGAAGATAAAGGAAAAAGTTCCCCAGTCGAAGGTGTGGTTCAGCCTGGTGCTTTAATCATTCTTCCAACCCCAAGGGAAGTTGCCAGACCAGAAGTGCAGAGAAATTGCTTCCCTGCTGGAAAACTCAACGAGGAAGAATGGGTTACTGTCTATGGATTCTCCCCTGCTGATACAAATCTAGTTTTGAGGGAATTCGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCCCACAAAGCTCTCAACAAAAATGGCGTTCAAATTAACGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCGATGCACCGGCAGGCACTCGACGAAAAGATAAATAATCCAGGATTCATGGTTATCCCTCCGGTGCCTTCTAGAACCACAGAACTCCTTGCAACGAGAGGGCCTGTGCGTACCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCGGGAGGTACCATTGCTTCGCCATCGAAATCGTTGGTGTCTAAGGTCATGGATTTGATGTTTGGAGTC

Coding sequence (CDS)

ATGAACACCACTTTGCATAGAACTCCCAACTCGGGGAGGCAGTCAATGTTCTACCAAGATTTAGCATCTCCTGTTACCTCGCGAAAAGGGAAATTTTCAACTCCAGGCCAGGCGGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCACCAGTTTTTACCTTGGAAGACCGCTCAGATTTCTCTCCTGAGTCTGGCATTCCTGATTATCCTCTTTCCCCAGAAATTAAATCAGACCCAAGGACCCCAATCCAAAGTCACGACTTCTCTTCACCGATGAAAAACAAGTCAAATGCCAGCACTTCGTATACACCAACTAGTGGACAACAAAGCCGGCAGGGATCAGCTGGATTTAGTTGGTGGTCAACATCAAAAGGTGGTGGCAGTGAGCAAGAAGATAAAGGAAAAAGTTCCCCAGTCGAAGGTGTGGTTCAGCCTGGTGCTTTAATCATTCTTCCAACCCCAAGGGAAGTTGCCAGACCAGAAGTGCAGAGAAATTGCTTCCCTGCTGGAAAACTCAACGAGGAAGAATGGGTTACTGTCTATGGATTCTCCCCTGCTGATACAAATCTAGTTTTGAGGGAATTCGAAAAATGCGGTGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCCCACAAAGCTCTCAACAAAAATGGCGTTCAAATTAACGGGGTGCTAATTGTTGGTGTGAAACCAGTGGACCCGATGCACCGGCAGGCACTCGACGAAAAGATAAATAATCCAGGATTCATGGTTATCCCTCCGGTGCCTTCTAGAACCACAGAACTCCTTGCAACGAGAGGGCCTGTGCGTACCTACAATCTCCAAAATGGTAACAGTAATGCACGGCAGTCGGGAGGTACCATTGCTTCGCCATCGAAATCGTTGGTGTCTAAGGTCATGGATTTGATGTTTGGAGTC

Protein sequence

MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFGV

Homology

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BLAST of MS009516 vs. NCBI nr
Match: XP_022151212.1 (nuclear pore complex protein NUP35 [Momordica charantia])

HSP 1 Score: 661.0 bits (1704), Expect = 5.4e-186
Identity = 327/328 (99.70%), Postives = 327/328 (99.70%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQ 120
           TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQ
Sbjct: 61  TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQ 120

Query: 121 GSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKL 180
           GSAGFSWWSTSKGGGSEQEDKGKSSPVEG VQPGALIILPTPREVARPEVQRNCFPAGKL
Sbjct: 121 GSAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAGKL 180

Query: 181 NEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG 240
           NEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG
Sbjct: 181 NEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG 240

Query: 241 VQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN 300
           VQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN
Sbjct: 241 VQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN 300

Query: 301 SNARQSGGTIASPSKSLVSKVMDLMFGV 329
           SNARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 301 SNARQSGGTIASPSKSLVSKVMDLMFGV 328

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BLAST of MS009516 vs. NCBI nr
Match: XP_038900103.1 (nuclear pore complex protein NUP35 [Benincasa hispida])

HSP 1 Score: 618.6 bits (1594), Expect = 3.1e-173
Identity = 306/330 (92.73%), Postives = 318/330 (96.36%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNT +HRTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTIVHRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120
           TLEDR  SDFSPESGI DYP+SPEIKSDPRTPIQSHDFSSP+KNKSNASTSYTP SGQQS
Sbjct: 61  TLEDRSGSDFSPESGIADYPVSPEIKSDPRTPIQSHDFSSPLKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAG 180
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGV+QPGALI LPTPREVARPEVQRNC PA 
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPAA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHRALNK 240

Query: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQALDEK+N+PGFMV PPV SRT+ELLATRG VR YNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNHPGFMVTPPVSSRTSELLATRGLVRPYNLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 329
           GNS+ARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSSARQSGGTIASPSKSLVSKVMDLMFGV 330

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BLAST of MS009516 vs. NCBI nr
Match: XP_004141656.1 (nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical protein Csa_015598 [Cucumis sativus])

HSP 1 Score: 604.4 bits (1557), Expect = 6.0e-169
Identity = 297/330 (90.00%), Postives = 313/330 (94.85%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120
           TLEDR  SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSSP KNKSNASTSYTP SGQQS
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAG 180
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGV+QPGALI LPTPREVARPEVQRNC P  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQAL+E++NNPGFMVIPPV SRT+ELLATRGP+R YNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 329
           G ++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330

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BLAST of MS009516 vs. NCBI nr
Match: KAA0051033.1 (nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa])

HSP 1 Score: 602.1 bits (1551), Expect = 3.0e-168
Identity = 295/330 (89.39%), Postives = 313/330 (94.85%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120
           TLEDR  SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSSP KNKSNASTSYTP +GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAG 180
           RQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGV+QPGALI LPTPREVARPEV+RNC P  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+R Y+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 329
           GN++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

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BLAST of MS009516 vs. NCBI nr
Match: XP_008462444.1 (PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo])

HSP 1 Score: 599.4 bits (1544), Expect = 1.9e-167
Identity = 294/330 (89.09%), Postives = 312/330 (94.55%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120
           TLEDR  SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSSP KNKSNASTSYTP +GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAG 180
           RQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGV+QPGALI LPTPREVARPEV+RNC P  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+  Y+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 329
           GN++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

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BLAST of MS009516 vs. ExPASy Swiss-Prot
Match: O04326 (Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 3.3e-122
Identity = 229/332 (68.98%), Postives = 264/332 (79.52%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+   HRTP SGRQS+ +QDLASPV++R+GKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDFSSPMKNKSNASTSYTPTSGQQS 120
           TL+DRSDFSPESGI DY  SP+ KSD RTP QS   +  +P K K  AS S++  + QQS
Sbjct: 61  TLDDRSDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQS 120

Query: 121 RQGSAGFSWWSTSKGGGS-EQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPA 180
           +Q S   SWWS SK G S EQ+DKGK SPVEGVVQPGAL+ LP PREVARPEVQR   P 
Sbjct: 121 QQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPT 180

Query: 181 GKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALN 240
           G L+EEEWVTVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALN
Sbjct: 181 GNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALN 240

Query: 241 KNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQ 300
           K G+ INGV+IVGVKPVDP+ +QAL+E++NN GFM +PP PS T      R   R   LQ
Sbjct: 241 KAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPP-PSSTRN--TARPLSRPQYLQ 300

Query: 301 NGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV 329
           NG++ + Q SGG +ASPSKS+VSK  DLMFGV
Sbjct: 301 NGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

[Close]

BLAST of MS009516 vs. ExPASy Swiss-Prot
Match: Q6P6X9 (Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-15
Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 182 EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGV 241
           ++ W+TV+GF PA  + +L +F + G ILKHV      NWMH+ YQ++  A KAL+K+G 
Sbjct: 157 DDTWITVFGFPPASASYILLQFAQYGNILKHVMS-NTGNWMHVQYQSKLQARKALSKDGK 216

Query: 242 QINGVLIVGVKP-VDPMHRQALDEKINNPGFMVIPPVPSRTT---ELLATRGPVRTYN-L 301
                +++GVKP +D    ++LD K +    +  PPV +  T    L   R  +R  +  
Sbjct: 217 IFGEAIMIGVKPCIDKSVMESLD-KGSTSSSVFTPPVKAPCTPSHPLSTPRSVMRPLSAA 276

Query: 302 QNGNSNARQSGGTIASPSK--SLVSKVMDLMFG 328
              +S+  Q      +P K  S VSK M+ MFG
Sbjct: 277 YKASSSDYQVVSDQQTPKKDESFVSKAMEYMFG 307

[Close]

BLAST of MS009516 vs. ExPASy Swiss-Prot
Match: Q8NFH5 (Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.1e-15
Identity = 87/317 (27.44%), Postives = 134/317 (42.27%), Query Frame = 0


Query: 20  DLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSDFSPESGIPDYPL 79
           DL +PVT +    S  G +  V  +          P P V   +D+S   P   I D   
Sbjct: 42  DLPAPVTPQPRSIS--GPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDIS 101

Query: 80  SPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQGSAGFSWWSTSKGGGSEQE 139
           SP + S P T           + + N S   +P  G  S  G+ G S +S +  G     
Sbjct: 102 SPGLGSTPLT----------SRRQPNISVMQSPLVGVTSTPGT-GQSMFSPASIG----- 161

Query: 140 DKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKLNEEEWVTVYGFSPADTNLV 199
                 P +  + P  L    T         Q +   +    ++ WVTV+GF  A  + +
Sbjct: 162 -----QPRKTTLSPAQLDPFYT---------QGDSLTSEDHLDDSWVTVFGFPQASASYI 221

Query: 200 LREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGVQINGVLIVGVKP-VDPMH 259
           L +F + G ILKHV      NWMHI YQ++  A KAL+K+G      +++GVKP +D   
Sbjct: 222 LLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSV 281

Query: 260 RQALDE-KINNPGFMVIPPVPS-------RTTELLATRGPVRTYNLQNGNSNARQSGGTI 319
            ++ D   +++P     PP+ +        +T  ++T  P+ T    + +     S    
Sbjct: 282 MESSDRCALSSPSLAFTPPIKTLGTPTQPGSTPRISTMRPLATAYKASTSDYQVISDRQT 325

Query: 320 ASPSKSLVSKVMDLMFG 328
               +SLVSK M+ MFG
Sbjct: 342 PKKDESLVSKAMEYMFG 325

[Close]

BLAST of MS009516 vs. ExPASy Swiss-Prot
Match: Q66IJ0 (Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.0e-14
Identity = 88/337 (26.11%), Postives = 138/337 (40.95%), Query Frame = 0


Query: 9   PNSGRQ---SMFYQDLASPVTSRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLE 68
           P++G Q        D+ +PV        TP Q  ++  +  R    +   PP PV  T +
Sbjct: 24  PSAGAQFLPGFLLGDIPTPV--------TPQQRPSIGVMEMRSPLLSGGSPPQPVVPTHK 83

Query: 69  DRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFS---SPMKNKSNASTSYTPTSGQQSRQ 128
           D+S   P   I D   SP + S P  P ++  FS   +P+     +S      SG + R 
Sbjct: 84  DKSGAPPVRSIYDDIASPGLGSTPLNPRKTASFSVLHTPLSGVIPSSPECKNISGSRKRP 143

Query: 129 GSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKL 188
            S+ F   S +  G S +                      +P ++     Q +   +   
Sbjct: 144 ASSVF---SPATIGHSRKTTL-------------------SPAQMDPFYTQGDALTSDDQ 203

Query: 189 NEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG 248
            ++ WVTV+GF  A  + +L +F + G I+KHV    + NWMHI YQ++  A KAL+K+G
Sbjct: 204 LDDTWVTVFGFPQASASYILLQFAQYGNIIKHVMS-NNGNWMHIQYQSKLQARKALSKDG 263

Query: 249 VQINGVLIVGVKPVDPMHRQALDEKINNP--GFMVIPPVPS--------RTTELLATRGP 308
                 +++GVKP          EK++ P    +  PPV +         T    + R  
Sbjct: 264 RIFGESIMIGVKPCIDKSVMEATEKVSTPTVSSVFTPPVKNIGTPTQSVGTPRAASMRPL 323

Query: 309 VRTYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG 328
             TY           +        +S+VSK M+ MFG
Sbjct: 324 AATYKTPASADYQVVADKQAPRKDESIVSKAMEYMFG 329

[Close]

BLAST of MS009516 vs. ExPASy Swiss-Prot
Match: Q68FY1 (Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.8e-12
Identity = 91/345 (26.38%), Postives = 144/345 (41.74%), Query Frame = 0


Query: 7   RTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS 66
           + P  G + M    L SP + + G           +A +   F   DLP P   T + RS
Sbjct: 9   QAPTLGSEPMM---LGSPTSPKPG----------ANAQFLPGFLMGDLPAP--VTPQPRS 68

Query: 67  DFSPESGIPDYPLSPEIK--SDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQGSAG 126
              P  G+ +   SP +   S P+  + +H      K+KS A     P         S G
Sbjct: 69  ISGPSVGVMEM-RSPLLAGGSPPQPVVPAH------KDKSGA----PPVRSIYDDISSPG 128

Query: 127 FSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPE-------------VQ 186
               ST      +       SP+ GV  P     + +P  + +P               Q
Sbjct: 129 LG--STPLPSRRQANISVLQSPLVGVTTPVTGQSMFSPANIGQPRKTTLSPAQLDPFYTQ 188

Query: 187 RNCFPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSD 246
            +   +    ++ WVTV+GF  A  + +L +F + G ILKHV      NWMHI YQ++  
Sbjct: 189 GDSLTSEDHLDDTWVTVFGFPQASASYILLQFAQYGNILKHVMS-NTGNWMHIRYQSKLQ 248

Query: 247 AHKALNKNGVQINGVLIVGVKP-VDPMHRQALDEKI-NNPGFMVIPPV-----PSR--TT 306
           A KAL+K+G      +++GVKP +D    +  D  + ++P     PP+     P++  +T
Sbjct: 249 ARKALSKDGRIFGESIMIGVKPCIDKNVMENSDRGVLSSPSLAFTPPIRTLGTPTQPGST 308

Query: 307 ELLATRGPVRTYNLQNGNSNARQSGGTIASPSKSLVSKVMDLMFG 328
             ++T  P+ T    + +     S        +SLVS+ M+ MFG
Sbjct: 309 PRVSTMRPLATAYKASTSDYQVISDRQTPKKDESLVSRAMEYMFG 324

[Close]

BLAST of MS009516 vs. ExPASy TrEMBL
Match: A0A6J1DCV4 (Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC111019186 PE=3 SV=1)

HSP 1 Score: 661.0 bits (1704), Expect = 2.6e-186
Identity = 327/328 (99.70%), Postives = 327/328 (99.70%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQ 120
           TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQ
Sbjct: 61  TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQSRQ 120

Query: 121 GSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAGKL 180
           GSAGFSWWSTSKGGGSEQEDKGKSSPVEG VQPGALIILPTPREVARPEVQRNCFPAGKL
Sbjct: 121 GSAGFSWWSTSKGGGSEQEDKGKSSPVEGXVQPGALIILPTPREVARPEVQRNCFPAGKL 180

Query: 181 NEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG 240
           NEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG
Sbjct: 181 NEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG 240

Query: 241 VQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN 300
           VQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN
Sbjct: 241 VQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQNGN 300

Query: 301 SNARQSGGTIASPSKSLVSKVMDLMFGV 329
           SNARQSGGTIASPSKSLVSKVMDLMFGV
Sbjct: 301 SNARQSGGTIASPSKSLVSKVMDLMFGV 328

[Close]

BLAST of MS009516 vs. ExPASy TrEMBL
Match: A0A0A0K7B2 (Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE=3 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 2.9e-169
Identity = 297/330 (90.00%), Postives = 313/330 (94.85%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120
           TLEDR  SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSSP KNKSNASTSYTP SGQQS
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPISGQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAG 180
           RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGV+QPGALI LPTPREVARPEVQRNC P  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVQRNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQAL+E++NNPGFMVIPPV SRT+ELLATRGP+R YNLQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALEERLNNPGFMVIPPVSSRTSELLATRGPMRPYNLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 329
           G ++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GYTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of MS009516 vs. ExPASy TrEMBL
Match: A0A5A7U592 (Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00200 PE=3 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 1.4e-168
Identity = 295/330 (89.39%), Postives = 313/330 (94.85%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120
           TLEDR  SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSSP KNKSNASTSYTP +GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAG 180
           RQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGV+QPGALI LPTPREVARPEV+RNC P  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+R Y+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMRPYSLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 329
           GN++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of MS009516 vs. ExPASy TrEMBL
Match: A0A1S3CH09 (Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 9.3e-168
Identity = 294/330 (89.09%), Postives = 312/330 (94.55%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120
           TLEDR  SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSSP KNKSNASTSYTP +GQ S
Sbjct: 61  TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNASTSYTPINGQPS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAG 180
           RQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGV+QPGALI LPTPREVARPEV+RNC P  
Sbjct: 121 RQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLA 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNK
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNK 240

Query: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300
           NG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+  Y+LQN
Sbjct: 241 NGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN 300

Query: 301 GNSNARQSGGTIASPSKSLVSKVMDLMFGV 329
           GN++AR SGG IASPSKSLVSKVMDLMFGV
Sbjct: 301 GNTSARHSGGAIASPSKSLVSKVMDLMFGV 330

[Close]

BLAST of MS009516 vs. ExPASy TrEMBL
Match: A0A6J1JYW9 (Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 PE=3 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 5.3e-163
Identity = 290/331 (87.61%), Postives = 307/331 (92.75%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           MNTT+HRT NSGRQS+FYQDLASPV++R+GKFSTPGQAAAVSALWRENFGNSDLPPPPVF
Sbjct: 1   MNTTVHRTSNSGRQSLFYQDLASPVSTRRGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60

Query: 61  TLEDR--SDFSPESGIPDYPLSPEIKSDPRTPIQSHDFSSPMKNKSNASTSYTPTSGQQS 120
           TLEDR  SDFSPESGIPDYP+SPE+KSDP TPIQSHDFSSPMK+KSNASTS+TP S QQS
Sbjct: 61  TLEDRSGSDFSPESGIPDYPVSPEVKSDPMTPIQSHDFSSPMKSKSNASTSHTPISAQQS 120

Query: 121 RQGSAGFSWWSTSKGGGSEQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPAG 180
           RQ SAGFSWWST KGGGSEQEDKGKSSPVEGV+QPGALI L TPREVARPEVQRNC PAG
Sbjct: 121 RQASAGFSWWSTPKGGGSEQEDKGKSSPVEGVIQPGALITLQTPREVARPEVQRNCLPAG 180

Query: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNK 240
           KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILY+NRS AHKAL+K
Sbjct: 181 KLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYKNRSGAHKALSK 240

Query: 241 NGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQN 300
           NG+QING+LIVGVKPVDP+ RQ LDEK+NNPGFMV+PPV SRT EL    GPVR YN QN
Sbjct: 241 NGIQINGMLIVGVKPVDPIDRQTLDEKLNNPGFMVLPPVSSRTAELATRGGPVRPYNFQN 300

Query: 301 GNSNARQSGG-TIASPSKSLVSKVMDLMFGV 329
           GNS ARQSGG TIASPSKSLVSKVMDLMFGV
Sbjct: 301 GNSYARQSGGTTIASPSKSLVSKVMDLMFGV 331

[Close]

BLAST of MS009516 vs. TAIR 10
Match: AT3G16310.1 (mitotic phosphoprotein N' end (MPPN) family protein )

HSP 1 Score: 439.5 bits (1129), Expect = 2.4e-123
Identity = 229/332 (68.98%), Postives = 264/332 (79.52%), Query Frame = 0


Query: 1   MNTTLHRTPNSGRQSMFYQDLASPVTSRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVF 60
           M+   HRTP SGRQS+ +QDLASPV++R+GKFS+PGQAAAVSALWRENFG SDLPPPP++
Sbjct: 1   MSAAAHRTPKSGRQSLLFQDLASPVSARRGKFSSPGQAAAVSALWRENFGGSDLPPPPMY 60

Query: 61  TLEDRSDFSPESGIPDYPLSPEIKSDPRTPIQS--HDFSSPMKNKSNASTSYTPTSGQQS 120
           TL+DRSDFSPESGI DY  SP+ KSD RTP QS   +  +P K K  AS S++  + QQS
Sbjct: 61  TLDDRSDFSPESGIADYSASPDAKSDRRTPFQSSGKNIVTPGKGKLEASPSFSLLNAQQS 120

Query: 121 RQGSAGFSWWSTSKGGGS-EQEDKGKSSPVEGVVQPGALIILPTPREVARPEVQRNCFPA 180
           +Q S   SWWS SK G S EQ+DKGK SPVEGVVQPGAL+ LP PREVARPEVQR   P 
Sbjct: 121 QQVSGSPSWWSQSKAGSSTEQDDKGKGSPVEGVVQPGALVTLPPPREVARPEVQRQIIPT 180

Query: 181 GKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALN 240
           G L+EEEWVTVYGFSP DTNLVLREFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALN
Sbjct: 181 GNLDEEEWVTVYGFSPGDTNLVLREFEKCGMVLKHVPGPRNANWMHILYQNRSDAHKALN 240

Query: 241 KNGVQINGVLIVGVKPVDPMHRQALDEKINNPGFMVIPPVPSRTTELLATRGPVRTYNLQ 300
           K G+ INGV+IVGVKPVDP+ +QAL+E++NN GFM +PP PS T      R   R   LQ
Sbjct: 241 KAGMMINGVVIVGVKPVDPIQKQALNERLNNQGFMPLPP-PSSTRN--TARPLSRPQYLQ 300

Query: 301 NGNSNARQ-SGGTIASPSKSLVSKVMDLMFGV 329
           NG++ + Q SGG +ASPSKS+VSK  DLMFGV
Sbjct: 301 NGSAFSPQPSGGAMASPSKSMVSKFFDLMFGV 329

The following BLAST results are available for this feature:

BLAST of MS009516 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151212.1	5.4e-186	99.70	nuclear pore complex protein NUP35 [Momordica charantia]	[more]
XP_038900103.1	3.1e-173	92.73	nuclear pore complex protein NUP35 [Benincasa hispida]	[more]
XP_004141656.1	6.0e-169	90.00	nuclear pore complex protein NUP35 [Cucumis sativus] >KGN45595.1 hypothetical pr...	[more]
KAA0051033.1	3.0e-168	89.39	nuclear pore complex protein NUP35 [Cucumis melo var. makuwa] >TYK03828.1 nuclea...	[more]
XP_008462444.1	1.9e-167	89.09	PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]	[more]

BLAST of MS009516 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04326	3.3e-122	68.98	Nuclear pore complex protein NUP35 OS=Arabidopsis thaliana OX=3702 GN=NUP35 PE=1...	[more]
Q6P6X9	2.1e-15	35.29	Nucleoporin NUP35 OS=Danio rerio OX=7955 GN=nup35 PE=1 SV=1	[more]
Q8NFH5	2.1e-15	27.44	Nucleoporin NUP35 OS=Homo sapiens OX=9606 GN=NUP35 PE=1 SV=1	[more]
Q66IJ0	3.0e-14	26.11	Nucleoporin NUP35 OS=Xenopus tropicalis OX=8364 GN=nup35 PE=2 SV=1	[more]
Q68FY1	2.8e-12	26.38	Nucleoporin NUP35 OS=Rattus norvegicus OX=10116 GN=Nup35 PE=1 SV=1	[more]

BLAST of MS009516 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCV4	2.6e-186	99.70	Nuclear pore complex protein NUP35 OS=Momordica charantia OX=3673 GN=LOC11101918...	[more]
A0A0A0K7B2	2.9e-169	90.00	Nuclear pore complex protein NUP35 OS=Cucumis sativus OX=3659 GN=Csa_7G452990 PE...	[more]
A0A5A7U592	1.4e-168	89.39	Nuclear pore complex protein NUP35 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CH09	9.3e-168	89.09	Nuclear pore complex protein NUP35 OS=Cucumis melo OX=3656 GN=LOC103500791 PE=3 ...	[more]
A0A6J1JYW9	5.3e-163	87.61	Nuclear pore complex protein NUP35 OS=Cucurbita maxima OX=3661 GN=LOC111488673 P...	[more]

BLAST of MS009516 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16310.1	2.4e-123	68.98	mitotic phosphoprotein N' end (MPPN) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017389	Nucleoporin, NUP53	PIRSF	PIRSF038119	NUP53	coord: 3..328 e-value: 1.0E-103 score: 345.5
IPR017389	Nucleoporin, NUP53	PANTHER	PTHR21527	NUCLEOPORIN NUP35	coord: 1..328
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 181..254 e-value: 1.3E-27 score: 97.6
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PFAM	PF05172	Nup35_RRM	coord: 180..265 e-value: 6.6E-26 score: 90.2
IPR007846	RNA-recognition motif (RRM) Nup35-type domain	PROSITE	PS51472	RRM_NUP35	coord: 180..261 score: 33.031082
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..135
None	No IPR available	CDD	cd12441	RRM_Nup53_like	coord: 183..256 e-value: 5.41431E-37 score: 125.417
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 183..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009516.1	MS009516.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0031965	nuclear membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0017056	structural constituent of nuclear pore