MS009496 (gene) Bitter gourd (TR) v1

Overview


Name	MS009496
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein PLANT CADMIUM RESISTANCE 8
Location	scaffold813: 1731447 .. 1732552 (+)
RNA-Seq Expression	MS009496
Synteny	MS009496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATACAGCGAGCCCAGCCCCTGGTTATGGTGGAAATACATATTCTGCTCAACCTGGATTCTCAGGTCCAACCATGTATCAAGCAAATATAGCGAGCCCAGCCCCTGATTATGCTGGAAATACACAATCTGCCGAACCCGAGTTCTCAGGTCCAACCATGTATCAAGCAAATACAGTTCGGGGGACTGTTTGGAGCACTGGATTATTTGATTGCCATGAAGATGAGACAAATGGTTAGTTCTTGCAGATAATGTGGCTGATGGGGACTGTATGTATATTCTTAAGGTTGTCTGTATAGTTTGCAACTTTGTTTCTGTGTTTTAAACTTGTCTATATGGACTGTCTGGTACTTTGAGAGGGACAGTTTCATCCAACACCAGAAAAAAGGTATTATTTTTCAGAAGAGGCCTGTATTGATGTCAAAATGGTGGTTCAACTTCATGCCTCTAGGGGTAGGAGGAATCAAAGTCTTCCTGTTTTTTAACACATTTCTTTCACTGTTGAAATTACAAATTTCTTGTCCTTTGAAGTTATGGATCCTTATGATCTGGAGATCCCAATTTAATGTGTATGGTTTCATATTGAGGATGGAGTACATCTTTTACATATTAATCTGTGTTGGCAGCGGTCATGACAGCATTCCTACCTTGTGTGACATTTGGACAGATTGCAGAAGTAATGGATCAAGGAGAATTGAGTAAGGGCACCCTTTAACCTCAACTCCTTACTCTTTCCAATTCCTTCCTGTTGTTCTCATTACGGTGACCATTTCACAACTTCCAATTCTGTTAAGTCAAGATATTATTATATTTTTAGATGTGAATTGTGAACTCTACATATCTTGCTGCCTTCAAGCAACTAATAGATGATATATTTGTGATACTCATTGCAGCCTGTCCTCTGGGTAGTCTTATATACGCTCTGATGATGCCTGCCTTGTGCTCTCAATGGCTCATGGGCTCAAAATATCGAACGAGACTGCGGAATAGATACAATTTGGTAGAAGCTCCATATACTGATATAATCTCTCATGTGTTCTGCCCATGCTGTTCACTATGCCAAGAGTTCAGAGAACTCCGAAAGAGAGGACTCGACCCAGCTCTAGGT

mRNA sequence

AATACAGCGAGCCCAGCCCCTGGTTATGGTGGAAATACATATTCTGCTCAACCTGGATTCTCAGGTCCAACCATGTATCAAGCAAATATAGCGAGCCCAGCCCCTGATTATGCTGGAAATACACAATCTGCCGAACCCGAGTTCTCAGGTCCAACCATGTATCAAGCAAATACAGTTCGGGGGACTGTTTGGAGCACTGGATTATTTGATTGCCATGAAGATGAGACAAATGCGGTCATGACAGCATTCCTACCTTGTGTGACATTTGGACAGATTGCAGAAGTAATGGATCAAGGAGAATTGACCTGTCCTCTGGGTAGTCTTATATACGCTCTGATGATGCCTGCCTTGTGCTCTCAATGGCTCATGGGCTCAAAATATCGAACGAGACTGCGGAATAGATACAATTTGGTAGAAGCTCCATATACTGATATAATCTCTCATGTGTTCTGCCCATGCTGTTCACTATGCCAAGAGTTCAGAGAACTCCGAAAGAGAGGACTCGACCCAGCTCTAGGT

Coding sequence (CDS)

AATACAGCGAGCCCAGCCCCTGGTTATGGTGGAAATACATATTCTGCTCAACCTGGATTCTCAGGTCCAACCATGTATCAAGCAAATATAGCGAGCCCAGCCCCTGATTATGCTGGAAATACACAATCTGCCGAACCCGAGTTCTCAGGTCCAACCATGTATCAAGCAAATACAGTTCGGGGGACTGTTTGGAGCACTGGATTATTTGATTGCCATGAAGATGAGACAAATGCGGTCATGACAGCATTCCTACCTTGTGTGACATTTGGACAGATTGCAGAAGTAATGGATCAAGGAGAATTGACCTGTCCTCTGGGTAGTCTTATATACGCTCTGATGATGCCTGCCTTGTGCTCTCAATGGCTCATGGGCTCAAAATATCGAACGAGACTGCGGAATAGATACAATTTGGTAGAAGCTCCATATACTGATATAATCTCTCATGTGTTCTGCCCATGCTGTTCACTATGCCAAGAGTTCAGAGAACTCCGAAAGAGAGGACTCGACCCAGCTCTAGGT

Protein sequence

NTASPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG

Homology

[Close]

BLAST of MS009496 vs. NCBI nr
Match: XP_022152927.1 (protein PLANT CADMIUM RESISTANCE 8 [Momordica charantia])

HSP 1 Score: 367.1 bits (941), Expect = 8.5e-98
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   NTASPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVR 60
           NTASPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVR
Sbjct: 29  NTASPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVR 88

Query: 61  GTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQ 120
           GTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQ
Sbjct: 89  GTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQ 148

Query: 121 WLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           WLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG
Sbjct: 149 WLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 201

[Close]

BLAST of MS009496 vs. NCBI nr
Match: XP_038904618.1 (protein PLANT CADMIUM RESISTANCE 8-like [Benincasa hispida])

HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84
Identity = 153/170 (90.00%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 4   SPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTV 63
           S   GYGGN  SAQPGFSGP MY+AN  S   +Y GNTQSAE EFSGPTMYQ NTVRGTV
Sbjct: 4   SSGSGYGGNAQSAQPGFSGPRMYEANTGSQGTNYGGNTQSAETEFSGPTMYQPNTVRGTV 63

Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM
Sbjct: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           GSKYRTRLR RYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG
Sbjct: 124 GSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 173

[Close]

BLAST of MS009496 vs. NCBI nr
Match: XP_008452303.1 (PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo] >KAA0046888.1 protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo var. makuwa] >TYK03259.1 protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo var. makuwa])

HSP 1 Score: 317.8 bits (813), Expect = 5.9e-83
Identity = 150/170 (88.24%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 4   SPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTV 63
           S A GYGG T SAQPGFSGP MY+AN  +PA +Y G   + E EFSGPTMYQANTVRG V
Sbjct: 4   SSANGYGGTTQSAQPGFSGPRMYEANTGNPATNYGGGGDTLETEFSGPTMYQANTVRGNV 63

Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM
Sbjct: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           GSKYRTRLR RYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG
Sbjct: 124 GSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 173

[Close]

BLAST of MS009496 vs. NCBI nr
Match: XP_011650553.1 (protein PLANT CADMIUM RESISTANCE 8 [Cucumis sativus] >KGN56202.1 hypothetical protein Csa_010153 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 6.5e-82
Identity = 149/170 (87.65%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 4   SPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTV 63
           S A GYGG T SAQ GFSGP MY+AN  +PA +Y G   + E EFSGPTMYQANTVRG V
Sbjct: 4   SSANGYGGTTQSAQHGFSGPRMYEANTGNPATNYGGGGDTLETEFSGPTMYQANTVRGNV 63

Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM
Sbjct: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           GSKYRTRLR RYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG
Sbjct: 124 GSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 173

[Close]

BLAST of MS009496 vs. NCBI nr
Match: XP_022992370.1 (protein PLANT CADMIUM RESISTANCE 8 [Cucurbita maxima])

HSP 1 Score: 303.9 bits (777), Expect = 8.8e-79
Identity = 143/166 (86.14%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 8   GYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTVWSTG 67
           GYGGNT   QPGF+GP+MYQ N  SPA ++   TQ AEPE  GPTMYQANTVRGTVWS+G
Sbjct: 63  GYGGNTQQDQPGFAGPSMYQPNTGSPANNF---TQYAEPELPGPTMYQANTVRGTVWSSG 122

Query: 68  LFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKY 127
           LFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGE+TCPLGSLIYALMMPALCSQWLMGS Y
Sbjct: 123 LFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGEMTCPLGSLIYALMMPALCSQWLMGSSY 182

Query: 128 RTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           R RLR RYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDP+LG
Sbjct: 183 RKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLG 225

[Close]

BLAST of MS009496 vs. ExPASy Swiss-Prot
Match: Q9M815 (Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana OX=3702 GN=PCR8 PE=1 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 7.5e-49
Identity = 85/129 (65.89%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 47  EFSGPTMYQANT--VRGTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCP 106
           +F+ P   QAN     G  WSTGLFDC  D+ NAV+T  +PCVTFGQIAEVMD+GE+TCP
Sbjct: 34  QFAPPNYQQANVNLSVGRPWSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCP 93

Query: 107 LGSLIYALMMPALCSQWLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELR 166
           LG+ +Y LMMPALCS W+MGSKYR ++R ++NLVEAPY+D  SHV CPCCSLCQE+REL+
Sbjct: 94  LGTFMYLLMMPALCSHWVMGSKYREKMRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELK 153

Query: 167 KRGLDPALG 174
            R LDP+LG
Sbjct: 154 IRNLDPSLG 162

[Close]

BLAST of MS009496 vs. ExPASy Swiss-Prot
Match: Q9LS43 (Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.8e-27
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           W++GLF C ED   A +T F PCVTFG+IA++ D+G   C    + Y L+   +    L 
Sbjct: 5   WTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCLF 64

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
              YRT++R+++ L E+P +D ++H FC CC+LCQE REL+ RGLDP++G
Sbjct: 65  SCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIG 114

[Close]

BLAST of MS009496 vs. ExPASy Swiss-Prot
Match: Q9M9A5 (Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           W++GLFDC  D  NA++T   P VTFGQIAEV+D+G  +C    ++Y L+        + 
Sbjct: 88  WTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPCVY 147

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
              +RT+LR++Y L +AP  D I+H FC  C+LCQE+REL+ RGLDP++G
Sbjct: 148 TCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEYRELKNRGLDPSIG 197

[Close]

BLAST of MS009496 vs. ExPASy Swiss-Prot
Match: Q9LS44 (Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana OX=3702 GN=PCR4 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26
Identity = 52/117 (44.44%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 57  NTVRGTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPA 116
           N     +WS+ LFDC  D  NAV+T   PCVT GQIAE++D+G   C  G L+Y ++   
Sbjct: 47  NNQTQNLWSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIF-F 106

Query: 117 LCSQWLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           +   ++    +R ++RN+Y L +AP  D I+H+FC  C+LCQE+REL+ RG DP +G
Sbjct: 107 IGVPFVYSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIG 162

[Close]

BLAST of MS009496 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.9e-24
Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           WSTGL +C +D  N  +T   PC+TFGQ AE++D+G  +C     +YAL+M     Q + 
Sbjct: 47  WSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGSTSCGTSGALYALVMLLTGCQCVY 106

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
              YR ++R +Y L  +P +D   H  C CC+LCQE+REL+KRG D ++G
Sbjct: 107 SCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCALCQEYRELKKRGFDMSIG 156

[Close]

BLAST of MS009496 vs. ExPASy TrEMBL
Match: A0A6J1DHK7 (protein PLANT CADMIUM RESISTANCE 8 OS=Momordica charantia OX=3673 GN=LOC111020535 PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 4.1e-98
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   NTASPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVR 60
           NTASPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVR
Sbjct: 29  NTASPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVR 88

Query: 61  GTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQ 120
           GTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQ
Sbjct: 89  GTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQ 148

Query: 121 WLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           WLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG
Sbjct: 149 WLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 201

[Close]

BLAST of MS009496 vs. ExPASy TrEMBL
Match: A0A5A7TVI4 (Protein PLANT CADMIUM RESISTANCE 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00800 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 150/170 (88.24%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 4   SPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTV 63
           S A GYGG T SAQPGFSGP MY+AN  +PA +Y G   + E EFSGPTMYQANTVRG V
Sbjct: 4   SSANGYGGTTQSAQPGFSGPRMYEANTGNPATNYGGGGDTLETEFSGPTMYQANTVRGNV 63

Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM
Sbjct: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           GSKYRTRLR RYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG
Sbjct: 124 GSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 173

[Close]

BLAST of MS009496 vs. ExPASy TrEMBL
Match: A0A1S3BUC2 (protein PLANT CADMIUM RESISTANCE 8 OS=Cucumis melo OX=3656 GN=LOC103493369 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.8e-83
Identity = 150/170 (88.24%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 4   SPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTV 63
           S A GYGG T SAQPGFSGP MY+AN  +PA +Y G   + E EFSGPTMYQANTVRG V
Sbjct: 4   SSANGYGGTTQSAQPGFSGPRMYEANTGNPATNYGGGGDTLETEFSGPTMYQANTVRGNV 63

Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM
Sbjct: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           GSKYRTRLR RYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG
Sbjct: 124 GSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 173

[Close]

BLAST of MS009496 vs. ExPASy TrEMBL
Match: A0A0A0L6I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099630 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.2e-82
Identity = 149/170 (87.65%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 4   SPAPGYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTV 63
           S A GYGG T SAQ GFSGP MY+AN  +PA +Y G   + E EFSGPTMYQANTVRG V
Sbjct: 4   SSANGYGGTTQSAQHGFSGPRMYEANTGNPATNYGGGGDTLETEFSGPTMYQANTVRGNV 63

Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM
Sbjct: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           GSKYRTRLR RYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG
Sbjct: 124 GSKYRTRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 173

[Close]

BLAST of MS009496 vs. ExPASy TrEMBL
Match: A0A6J1JVI4 (protein PLANT CADMIUM RESISTANCE 8 OS=Cucurbita maxima OX=3661 GN=LOC111488698 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.3e-79
Identity = 143/166 (86.14%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 8   GYGGNTYSAQPGFSGPTMYQANIASPAPDYAGNTQSAEPEFSGPTMYQANTVRGTVWSTG 67
           GYGGNT   QPGF+GP+MYQ N  SPA ++   TQ AEPE  GPTMYQANTVRGTVWS+G
Sbjct: 63  GYGGNTQQDQPGFAGPSMYQPNTGSPANNF---TQYAEPELPGPTMYQANTVRGTVWSSG 122

Query: 68  LFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLMGSKY 127
           LFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGE+TCPLGSLIYALMMPALCSQWLMGS Y
Sbjct: 123 LFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGEMTCPLGSLIYALMMPALCSQWLMGSSY 182

Query: 128 RTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           R RLR RYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDP+LG
Sbjct: 183 RKRLRERYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPSLG 225

[Close]

BLAST of MS009496 vs. TAIR 10
Match: AT1G52200.1 (PLAC8 family protein )

HSP 1 Score: 194.9 bits (494), Expect = 5.4e-50
Identity = 85/129 (65.89%), Postives = 103/129 (79.84%), Query Frame = 0


Query: 47  EFSGPTMYQANT--VRGTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCP 106
           +F+ P   QAN     G  WSTGLFDC  D+ NAV+T  +PCVTFGQIAEVMD+GE+TCP
Sbjct: 34  QFAPPNYQQANVNLSVGRPWSTGLFDCQADQANAVLTTIVPCVTFGQIAEVMDEGEMTCP 93

Query: 107 LGSLIYALMMPALCSQWLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELR 166
           LG+ +Y LMMPALCS W+MGSKYR ++R ++NLVEAPY+D  SHV CPCCSLCQE+REL+
Sbjct: 94  LGTFMYLLMMPALCSHWVMGSKYREKMRRKFNLVEAPYSDCASHVLCPCCSLCQEYRELK 153

Query: 167 KRGLDPALG 174
            R LDP+LG
Sbjct: 154 IRNLDPSLG 162

[Close]

BLAST of MS009496 vs. TAIR 10
Match: AT3G18470.1 (PLAC8 family protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-28
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           W++GLF C ED   A +T F PCVTFG+IA++ D+G   C    + Y L+   +    L 
Sbjct: 5   WTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCLF 64

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
              YRT++R+++ L E+P +D ++H FC CC+LCQE REL+ RGLDP++G
Sbjct: 65  SCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIG 114

[Close]

BLAST of MS009496 vs. TAIR 10
Match: AT1G49030.1 (PLAC8 family protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-28
Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = 0


Query: 64  WSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWLM 123
           W++GLFDC  D  NA++T   P VTFGQIAEV+D+G  +C    ++Y L+        + 
Sbjct: 88  WTSGLFDCMNDGENALITCCFPFVTFGQIAEVIDEGATSCGTAGMLYGLICCLFAIPCVY 147

Query: 124 GSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
              +RT+LR++Y L +AP  D I+H FC  C+LCQE+REL+ RGLDP++G
Sbjct: 148 TCTFRTKLRSKYGLPDAPAPDWITHCFCEYCALCQEYRELKNRGLDPSIG 197

[Close]

BLAST of MS009496 vs. TAIR 10
Match: AT3G18460.1 (PLAC8 family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 52/117 (44.44%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 57  NTVRGTVWSTGLFDCHEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPA 116
           N     +WS+ LFDC  D  NAV+T   PCVT GQIAE++D+G   C  G L+Y ++   
Sbjct: 47  NNQTQNLWSSDLFDCMNDSENAVITCLAPCVTLGQIAEIVDEGATPCATGGLLYGMIF-F 106

Query: 117 LCSQWLMGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
           +   ++    +R ++RN+Y L +AP  D I+H+FC  C+LCQE+REL+ RG DP +G
Sbjct: 107 IGVPFVYSCMFRAKMRNKYGLPDAPAPDWITHLFCEHCALCQEYRELKHRGFDPNIG 162

[Close]

BLAST of MS009496 vs. TAIR 10
Match: AT1G58320.1 (PLAC8 family protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24
Identity = 54/111 (48.65%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 64  WSTGLFDC-HEDETNAVMTAFLPCVTFGQIAEVMDQGELTCPLGSLIYALMMPALCSQWL 123
           W+TGL+DC  ED +    T   PCV FG+IAE++D+GE +  L  L+   M    C  W 
Sbjct: 17  WTTGLYDCLSEDISTCCFTWVCPCVAFGRIAEILDKGETSRGLAGLMVVAMSSIGCG-WY 76

Query: 124 MGSKYRTRLRNRYNLVEAPYTDIISHVFCPCCSLCQEFRELRKRGLDPALG 174
             SKYR +LR++Y L EAP  D   H FC  C+L QE REL+ RGLDP+LG
Sbjct: 77  YASKYRAKLRHQYALPEAPCADGAIHCFCCPCALTQEHRELKHRGLDPSLG 126

The following BLAST results are available for this feature:

BLAST of MS009496 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152927.1	8.5e-98	100.00	protein PLANT CADMIUM RESISTANCE 8 [Momordica charantia]	[more]
XP_038904618.1	1.1e-84	90.00	protein PLANT CADMIUM RESISTANCE 8-like [Benincasa hispida]	[more]
XP_008452303.1	5.9e-83	88.24	PREDICTED: protein PLANT CADMIUM RESISTANCE 8 [Cucumis melo] >KAA0046888.1 prote...	[more]
XP_011650553.1	6.5e-82	87.65	protein PLANT CADMIUM RESISTANCE 8 [Cucumis sativus] >KGN56202.1 hypothetical pr...	[more]
XP_022992370.1	8.8e-79	86.14	protein PLANT CADMIUM RESISTANCE 8 [Cucurbita maxima]	[more]

BLAST of MS009496 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M815	7.5e-49	65.89	Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis thaliana OX=3702 GN=PCR8 PE=1 ...	[more]
Q9LS43	2.8e-27	45.45	Protein PLANT CADMIUM RESISTANCE 7 OS=Arabidopsis thaliana OX=3702 GN=PCR7 PE=2 ...	[more]
Q9M9A5	1.1e-26	47.27	Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana OX=3702 GN=PCR6 PE=2 ...	[more]
Q9LS44	1.8e-26	44.44	Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis thaliana OX=3702 GN=PCR4 PE=3 ...	[more]
B6TYV8	2.9e-24	43.64	Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1	[more]

BLAST of MS009496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHK7	4.1e-98	100.00	protein PLANT CADMIUM RESISTANCE 8 OS=Momordica charantia OX=3673 GN=LOC11102053...	[more]
A0A5A7TVI4	2.8e-83	88.24	Protein PLANT CADMIUM RESISTANCE 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BUC2	2.8e-83	88.24	protein PLANT CADMIUM RESISTANCE 8 OS=Cucumis melo OX=3656 GN=LOC103493369 PE=4 ...	[more]
A0A0A0L6I3	3.2e-82	87.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099630 PE=4 SV=1	[more]
A0A6J1JVI4	4.3e-79	86.14	protein PLANT CADMIUM RESISTANCE 8 OS=Cucurbita maxima OX=3661 GN=LOC111488698 P...	[more]

BLAST of MS009496 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52200.1	5.4e-50	65.89	PLAC8 family protein	[more]
AT3G18470.1	2.0e-28	45.45	PLAC8 family protein	[more]
AT1G49030.1	7.5e-28	47.27	PLAC8 family protein	[more]
AT3G18460.1	1.3e-27	44.44	PLAC8 family protein	[more]
AT1G58320.1	3.0e-24	48.65	PLAC8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 64..162 e-value: 1.3E-23 score: 83.7
IPR006461	PLAC8 motif-containing protein	TIGRFAM	TIGR01571	TIGR01571	coord: 64..164 e-value: 4.2E-30 score: 102.6
IPR006461	PLAC8 motif-containing protein	PANTHER	PTHR15907	DUF614 FAMILY PROTEIN-RELATED	coord: 44..173
None	No IPR available	PANTHER	PTHR15907:SF150	PROTEIN PLANT CADMIUM RESISTANCE 8	coord: 44..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009496.1	MS009496.1	mRNA