MS009495 (gene) Bitter gourd (TR) v1

Overview


Name	MS009495
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome c-type biogenesis protein
Location	scaffold813: 1729378 .. 1730545 (+)
RNA-Seq Expression	MS009495
Synteny	MS009495

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGTAACGATGATGCTGTAAAAAAAACACAGTTGGTGGAAGCGCGAGCAAGAAATATTAGTCACAATGTCAGGTGCATTGAGTGCGGGAGTCAATCCATTGAAGATTCACAAGCAGATATTGCGATTCTCCTCAGAAAGGTACCAATTATTTAGATATTTCCAATTGAGGGGTTCTATGTTCTCTTTGTTCCTATCAAACCGAATAACTTGTGAAACCATCACAATCTAATTTTCTAATTCTTCCACTAGTACTTTGCGCCAGAAATCCTCCAGCACATGGCAAGTACCAATGTAGGTTGAGAGTTTCACAAAAGATGGTCCAAGCTTTTGTGATAAAGGGGCAGCAATGTAGCATTACACTAGTTCATTATTTTATTTGCATAAAATACCTAAAGGGAATAGAAATGAATTAGGGTTTTTGATTTTTGGTTTACTATGCCTTTAGAGTTGGTGGTGGGATGCAAGAAATCTTCCTGTGGATTACGAGACTACCTTCAAAATAACCATCTATGCTGGCAGTCCCGGGAAATTCTTAAATGATGCACATTTGTCAATAAACTCCACCCCTTATGGCCTAACGATGGACGAGAAAGACTGATTTAACGGATCATGAACCTTTGCTACATAATGATTACTCACTGATTTGTTGAGTTCTATATCTTAGGCCAATAATTTTTAGATCACTATTTTTATGCAATGGTTTTGCCTGATATTGGGTTGTGTTTGTAATATCACCATAGTTGATCCGTGATGAGATTCGATCTGGGAAATCAGACAAGGAGATCTATAGAAAGCTTGAGGATGATTATGGGGAGACGGTCCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTAAGTTTATATTTGGTAAGAGTGACAAAATTAAGTAAATATTTATGCTTATTTCTTTTAGTTTTGGTCTCAAATATGTTACTTCCAAATAGGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCATACAATAAGCACAAGCAAAAGACTAACGTTCACATCATGGCTTTAAATCTGGTCAGGGGTGTTCCATTGACACCAAAAGAGAAGCAAACTATGTTAGATCTCCTCACACCTCCACCTCCTCAGAGAACTGCTTCTTCCTGGTGGAGGAGTTGGCGAAGGCAA

mRNA sequence

ATGGAGAGTAACGATGATGCTGTAAAAAAAACACAGTTGGTGGAAGCGCGAGCAAGAAATATTAGTCACAATGTCAGGTGCATTGAGTGCGGGAGTCAATCCATTGAAGATTCACAAGCAGATATTGCGATTCTCCTCAGAAAGTTGATCCGTGATGAGATTCGATCTGGGAAATCAGACAAGGAGATCTATAGAAAGCTTGAGGATGATTATGGGGAGACGGTCCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCATACAATAAGCACAAGCAAAAGACTAACGTTCACATCATGGCTTTAAATCTGGTCAGGGGTGTTCCATTGACACCAAAAGAGAAGCAAACTATGTTAGATCTCCTCACACCTCCACCTCCTCAGAGAACTGCTTCTTCCTGGTGGAGGAGTTGGCGAAGGCAA

Coding sequence (CDS)

ATGGAGAGTAACGATGATGCTGTAAAAAAAACACAGTTGGTGGAAGCGCGAGCAAGAAATATTAGTCACAATGTCAGGTGCATTGAGTGCGGGAGTCAATCCATTGAAGATTCACAAGCAGATATTGCGATTCTCCTCAGAAAGTTGATCCGTGATGAGATTCGATCTGGGAAATCAGACAAGGAGATCTATAGAAAGCTTGAGGATGATTATGGGGAGACGGTCCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCATACAATAAGCACAAGCAAAAGACTAACGTTCACATCATGGCTTTAAATCTGGTCAGGGGTGTTCCATTGACACCAAAAGAGAAGCAAACTATGTTAGATCTCCTCACACCTCCACCTCCTCAGAGAACTGCTTCTTCCTGGTGGAGGAGTTGGCGAAGGCAA

Protein sequence

MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

Homology

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BLAST of MS009495 vs. NCBI nr
Match: XP_022152937.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia])

HSP 1 Score: 318.2 bits (814), Expect = 4.1e-83
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD
Sbjct: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN
Sbjct: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 158

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BLAST of MS009495 vs. NCBI nr
Match: XP_008452301.1 (PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >XP_008452302.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >XP_016901245.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >KAA0046887.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo var. makuwa] >TYK03260.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 292.4 bits (747), Expect = 2.4e-75
Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME ++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIY+KLE+DYGET+LYTPKFDLQTA LWLSPVLVAGAA GVWAY+KHKQ++NVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLL+PPP QRT SSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158

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BLAST of MS009495 vs. NCBI nr
Match: XP_004149299.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus] >KGN56203.1 hypothetical protein Csa_010849 [Cucumis sativus])

HSP 1 Score: 291.6 bits (745), Expect = 4.1e-75
Identity = 140/158 (88.61%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME+++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD
Sbjct: 1   METDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           K+IY+KLE+DYGET+LYTPKFDLQTA LWLSPV+VAGAA GVWAY+KHKQ++NVHIMALN
Sbjct: 61  KDIYKKLENDYGETILYTPKFDLQTAGLWLSPVIVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLL+PPP QRT SSWWR+WRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRNWRRQ 158

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BLAST of MS009495 vs. NCBI nr
Match: XP_022953979.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953980.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953981.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953983.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953984.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022992421.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992422.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992423.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992424.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992425.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_023549463.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549464.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549465.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549466.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >KAG7014070.1 Cytochrome c-type biogenesis CcmH-like mitochondrial protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290.4 bits (742), Expect = 9.2e-75
Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           MES+ DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD
Sbjct: 1   MESDADAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEI++KLE+DYGET+LYTPKFDLQTAALWLSPVLVAGAAAGVWAY+K+KQK+NVHIMALN
Sbjct: 61  KEIFKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKYKQKSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           +VRGVPLTP+EKQTMLDLL+PPPPQR AS WWR WR Q
Sbjct: 121 IVRGVPLTPREKQTMLDLLSPPPPQRAASLWWRRWRSQ 158

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BLAST of MS009495 vs. NCBI nr
Match: XP_038904619.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida] >XP_038904620.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida] >XP_038904621.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida])

HSP 1 Score: 288.1 bits (736), Expect = 4.6e-74
Identity = 141/153 (92.16%), Postives = 152/153 (99.35%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME+++DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIY+KLE+DYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAY+KHKQ++NVHIMALN
Sbjct: 61  KEIYKKLENDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWR 154
           LVRGVPLTPKEKQTMLDLL+PPP QRT+SSWWR
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTSSSWWR 153

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BLAST of MS009495 vs. ExPASy Swiss-Prot
Match: B8AFK5 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa subsp. indica OX=39946 GN=CCMH PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.2e-66
Identity = 119/150 (79.33%), Postives = 138/150 (92.00%), Query Frame = 0


Query: 3   SNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKE 62
           + ++ VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGKSDKE
Sbjct: 2   ATEEDVKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDKE 61

Query: 63  IYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALNLV 122
           IY+KL+ DYGET+LYTPKFDLQTAA+WLSPV+V G AAGVWAY KH+Q+TNVHIMALNLV
Sbjct: 62  IYKKLQADYGETILYTPKFDLQTAAIWLSPVIVGGVAAGVWAYKKHRQRTNVHIMALNLV 121

Query: 123 RGVPLTPKEKQTMLDLLTPPPPQRTASSWW 153
           RGVPLTP+EK+TMLD+LTPPPP   A+ WW
Sbjct: 122 RGVPLTPREKETMLDVLTPPPP---ANKWW 148

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BLAST of MS009495 vs. ExPASy Swiss-Prot
Match: Q6K7S7 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa subsp. japonica OX=39947 GN=CCMH PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 6.2e-66
Identity = 119/150 (79.33%), Postives = 138/150 (92.00%), Query Frame = 0


Query: 3   SNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKE 62
           + ++ VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGKSDKE
Sbjct: 2   ATEEDVKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDKE 61

Query: 63  IYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALNLV 122
           IY+KL+ DYGET+LYTPKFDLQTAA+WLSPV+V G AAGVWAY KH+Q+TNVHIMALNLV
Sbjct: 62  IYKKLQADYGETILYTPKFDLQTAAIWLSPVIVGGVAAGVWAYQKHRQRTNVHIMALNLV 121

Query: 123 RGVPLTPKEKQTMLDLLTPPPPQRTASSWW 153
           RGVPLTP+EK+TMLD+LTPPPP   A+ WW
Sbjct: 122 RGVPLTPREKETMLDVLTPPPP---ANKWW 148

[Close]

BLAST of MS009495 vs. ExPASy Swiss-Prot
Match: Q9XI46 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMH PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-54
Identity = 107/156 (68.59%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME  D+  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GK+D
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIY KLED++GETVLY PKFDLQTAALWL+PV++AG  A    Y KH+ + NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW 156
           L+RGVPLTPKE+ T+LD+L PP PP +   S  R W
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRW 156

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BLAST of MS009495 vs. ExPASy Swiss-Prot
Match: P45405 (Cytochrome c-type biogenesis protein CcmH OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=ccmH PE=3 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 6   DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYR 65
           D +      E RAR++S  +RC+ C +QSI+DS A +A  LR L+R+ I +G S+ ++  
Sbjct: 25  DEIMSDPAKETRARDLSRELRCMVCQNQSIDDSDAPLARDLRLLVRERIAAGDSNSQVLD 84

Query: 66  KLEDDYGETVLYTPKFDLQTAALW-LSPVLVAGAAAGVWAYNKHKQKTNVHIMALNLVRG 125
            L   YGE VL  P+F+ QT  LW L P+L+ G    +W   + + ++   + A      
Sbjct: 85  FLVARYGEFVLLKPRFERQTLLLWLLGPLLLTGGGLALWLQIRRRSRSGADLPA------ 144

Query: 126 VPLTPKEKQTMLDLLT 141
            PLTP E+  +  L++
Sbjct: 145 PPLTPDEEARLAALMS 154

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BLAST of MS009495 vs. ExPASy Swiss-Prot
Match: P45406 (Cytochrome c-type biogenesis protein CcmH OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ccmH PE=3 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 8.5e-15
Identity = 52/140 (37.14%), Postives = 77/140 (55.00%), Query Frame = 0


Query: 4   NDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEI 63
           N D V     +EARAR IS  +RC+ C +QSI+DS A++A  LR L+R+ +++G SD+ +
Sbjct: 22  NPDEVLADPALEARARAISAQLRCMVCQNQSIDDSNAELAKDLRLLVRERLKNGDSDEAV 81

Query: 64  YRKLEDDYGETVLYTPKFDLQTAALWLSP--VLVAGAAAGVWAYNKHKQKTNVHIMALNL 123
              +   YGE VL  P+ + +T  LW  P  +LVAG    V A  +   +          
Sbjct: 82  ISYVVSRYGEFVLLNPRLEAKTLVLWGMPAILLVAGIITLVVAARRRGAR---------- 141

Query: 124 VRGVPLTPKEKQTMLDLLTP 142
           V G PL+ +EK+ +  LL P
Sbjct: 142 VPGAPLSDEEKERLDRLLRP 151

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BLAST of MS009495 vs. ExPASy TrEMBL
Match: A0A6J1DHL6 (Cytochrome c-type biogenesis protein OS=Momordica charantia OX=3673 GN=LOC111020546 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.0e-83
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD
Sbjct: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN
Sbjct: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 158

[Close]

BLAST of MS009495 vs. ExPASy TrEMBL
Match: A0A1S4DZT6 (Cytochrome c-type biogenesis protein OS=Cucumis melo OX=3656 GN=LOC103493367 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME ++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIY+KLE+DYGET+LYTPKFDLQTA LWLSPVLVAGAA GVWAY+KHKQ++NVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLL+PPP QRT SSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158

[Close]

BLAST of MS009495 vs. ExPASy TrEMBL
Match: A0A5A7TY95 (Cytochrome c-type biogenesis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00810 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME ++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIY+KLE+DYGET+LYTPKFDLQTA LWLSPVLVAGAA GVWAY+KHKQ++NVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLL+PPP QRT SSWWRSWRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRSWRRQ 158

[Close]

BLAST of MS009495 vs. ExPASy TrEMBL
Match: A0A0A0L351 (Cytochrome c-type biogenesis protein OS=Cucumis sativus OX=3659 GN=Csa_3G099640 PE=3 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 140/158 (88.61%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME+++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD
Sbjct: 1   METDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           K+IY+KLE+DYGET+LYTPKFDLQTA LWLSPV+VAGAA GVWAY+KHKQ++NVHIMALN
Sbjct: 61  KDIYKKLENDYGETILYTPKFDLQTAGLWLSPVIVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           LVRGVPLTPKEKQTMLDLL+PPP QRT SSWWR+WRRQ
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRNWRRQ 158

[Close]

BLAST of MS009495 vs. ExPASy TrEMBL
Match: A0A6J1JTI4 (Cytochrome c-type biogenesis protein OS=Cucurbita maxima OX=3661 GN=LOC111488733 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.4e-75
Identity = 142/158 (89.87%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           MES+ DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD
Sbjct: 1   MESDADAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEI++KLE+DYGET+LYTPKFDLQTAALWLSPVLVAGAAAGVWAY+K+KQK+NVHIMALN
Sbjct: 61  KEIFKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKYKQKSNVHIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ 159
           +VRGVPLTP+EKQTMLDLL+PPPPQR AS WWR WR Q
Sbjct: 121 IVRGVPLTPREKQTMLDLLSPPPPQRAASLWWRRWRSQ 158

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BLAST of MS009495 vs. TAIR 10
Match: AT1G15220.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-55
Identity = 107/156 (68.59%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME  D+  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GK+D
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIY KLED++GETVLY PKFDLQTAALWL+PV++AG  A    Y KH+ + NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW 156
           L+RGVPLTPKE+ T+LD+L PP PP +   S  R W
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRW 156

[Close]

BLAST of MS009495 vs. TAIR 10
Match: AT1G15220.2 (cytochrome c biogenesis protein family )

HSP 1 Score: 213.0 bits (541), Expect = 1.7e-55
Identity = 107/156 (68.59%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60
           ME  D+  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GK+D
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120
           KEIY KLED++GETVLY PKFDLQTAALWL+PV++AG  A    Y KH+ + NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 121 LVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW 156
           L+RGVPLTPKE+ T+LD+L PP PP +   S  R W
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRW 156

The following BLAST results are available for this feature:

BLAST of MS009495 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152937.1	4.1e-83	100.00	cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charanti...	[more]
XP_008452301.1	2.4e-75	89.87	PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis...	[more]
XP_004149299.1	4.1e-75	88.61	cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus] >...	[more]
XP_022953979.1	9.2e-75	89.87	cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata...	[more]
XP_038904619.1	4.6e-74	92.16	cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]...	[more]

BLAST of MS009495 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AFK5	6.2e-66	79.33	Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa sub...	[more]
Q6K7S7	6.2e-66	79.33	Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa sub...	[more]
Q9XI46	2.4e-54	68.59	Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Arabidopsis thal...	[more]
P45405	1.3e-15	34.56	Cytochrome c-type biogenesis protein CcmH OS=Bradyrhizobium diazoefficiens (stra...	[more]
P45406	8.5e-15	37.14	Cytochrome c-type biogenesis protein CcmH OS=Rhizobium meliloti (strain 1021) OX...	[more]

BLAST of MS009495 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHL6	2.0e-83	100.00	Cytochrome c-type biogenesis protein OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A1S4DZT6	1.2e-75	89.87	Cytochrome c-type biogenesis protein OS=Cucumis melo OX=3656 GN=LOC103493367 PE=...	[more]
A0A5A7TY95	1.2e-75	89.87	Cytochrome c-type biogenesis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0L351	2.0e-75	88.61	Cytochrome c-type biogenesis protein OS=Cucumis sativus OX=3659 GN=Csa_3G099640 ...	[more]
A0A6J1JTI4	4.4e-75	89.87	Cytochrome c-type biogenesis protein OS=Cucurbita maxima OX=3661 GN=LOC111488733...	[more]

BLAST of MS009495 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15220.1	1.7e-55	68.59	cytochrome c biogenesis protein family	[more]
AT1G15220.2	1.7e-55	68.59	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005616	CcmH/CycL/Ccl2/NrfF family	PFAM	PF03918	CcmH	coord: 4..137 e-value: 9.9E-31 score: 105.9
IPR038297	CcmH/CycL/Ccl2/NrfF domain superfamily	GENE3D	1.10.8.640	Cytochrome C biogenesis protein	coord: 3..82 e-value: 9.6E-21 score: 75.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..158
None	No IPR available	PANTHER	PTHR47601	FAMILY NOT NAMED	coord: 1..156
None	No IPR available	CDD	cd16378	CcmH_N	coord: 14..79 e-value: 2.62875E-27 score: 95.2882

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009495.1	MS009495.1	mRNA