MS009487 (gene) Bitter gourd (TR) v1

Overview


Name	MS009487
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Dynein light chain
Location	scaffold813: 1677086 .. 1677573 (+)
RNA-Seq Expression	MS009487
Synteny	MS009487

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAAGGCAAAGCTTTGGTACAGGACACAGACATGCCTGGCAAGATGCAGGTCCAAGCCATGGCCGCCGCTTATAAAGCTCTGGATCTCTATGATGTTTTCGACTGCAAATCCATTGCTGGCCACATAAAAAAGGTTATCTCTCTCTCTTTCTCTCTCTATCTTCGTTTGTTGTGTATGTGAGGAAGAACTTGGTGGGTTGCAGATGTTTTTTTCTTGACTTTAATGGCAGAACCATGTTGGTTGGTTGAGGTTCTGTGTCTGTGTGGAGGAGAAGACTTTGGTAAGAGAATCTCAGTGTTTGATTCCTCAACTGGTTTGGTTGTGGATTTTTGCAGGATTTTGATAACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTTACCCACTCCAAAGGGTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGGTGACTTCGGCCCCA

mRNA sequence

ATGTTGGAAGGCAAAGCTTTGGTACAGGACACAGACATGCCTGGCAAGATGCAGGTCCAAGCCATGGCCGCCGCTTATAAAGCTCTGGATCTCTATGATGTTTTCGACTGCAAATCCATTGCTGGCCACATAAAAAAGGATTTTGATAACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTTACCCACTCCAAAGGGTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGGTGACTTCGGCCCCA

Coding sequence (CDS)

ATGTTGGAAGGCAAAGCTTTGGTACAGGACACAGACATGCCTGGCAAGATGCAGGTCCAAGCCATGGCCGCCGCTTATAAAGCTCTGGATCTCTATGATGTTTTCGACTGCAAATCCATTGCTGGCCACATAAAAAAGGATTTTGATAACAGATATGGAAGCGGATGGCAATGTGTGGTGGGTTCAAATTTTGGTTGTTTCTTTACCCACTCCAAAGGGTCTTTCATCTACTTCAAACTGGAGACTCTTAACTTTCTCATCTTCAAAGGGGTGACTTCGGCCCCA

Protein sequence

MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSAP

Homology

[Close]

BLAST of MS009487 vs. NCBI nr
Match: XP_038897874.1 (dynein light chain LC6, flagellar outer arm-like [Benincasa hispida])

HSP 1 Score: 186.8 bits (473), Expect = 8.6e-44
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKAL+QDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDNRYGSGWQCVV
Sbjct: 1  MLEGKALIQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSA 95
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS+
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of MS009487 vs. NCBI nr
Match: XP_011659570.1 (dynein light chain LC6, flagellar outer arm [Cucumis sativus] >KGN45379.1 hypothetical protein Csa_016911 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSA 95
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS+
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of MS009487 vs. NCBI nr
Match: XP_008462164.1 (PREDICTED: dynein light chain LC6, flagellar outer arm-like [Cucumis melo] >KAA0059304.1 dynein light chain LC6, flagellar outer arm-like [Cucumis melo var. makuwa] >TYK04024.1 dynein light chain LC6, flagellar outer arm-like [Cucumis melo var. makuwa])

HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSA 95
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS+
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of MS009487 vs. NCBI nr
Match: XP_022964212.1 (dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata] >XP_023000412.1 dynein light chain LC6, flagellar outer arm-like [Cucurbita maxima] >KAG6593463.1 hypothetical protein SDJN03_12939, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025803.1 hypothetical protein SDJN02_12301 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKA VQDTDMP KMQ+QAM AA KALDLYDVFDCKSIA HIKKDFD+RYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSAP 96
          GSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTS+P
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSP 95

[Close]

BLAST of MS009487 vs. NCBI nr
Match: XP_023513963.1 (dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKA VQDTDMP KMQ+QAM AA KALDLYDVFDCKSIA HIKKDFD+RYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPNKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSAP 96
          GSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTS+P
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSP 95

[Close]

BLAST of MS009487 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-14
Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFK 90
          G NFG + TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS009487 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-14
Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFK 90
          G NFG + TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS009487 vs. ExPASy Swiss-Prot
Match: P61273 (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-14
Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFK 90
          G NFG + TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS009487 vs. ExPASy Swiss-Prot
Match: P63168 (Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-14
Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFK 90
          G NFG + TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS009487 vs. ExPASy Swiss-Prot
Match: P63169 (Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-14
Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          M + KA++++ DM  +MQ  ++  A +AL+ Y++   K IA HIKK+FD +Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIE--KDIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFK 90
          G NFG + TH    FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS009487 vs. ExPASy TrEMBL
Match: A0A5A7UW48 (Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002230 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-44
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSA 95
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS+
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of MS009487 vs. ExPASy TrEMBL
Match: A0A0A0K947 (Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-44
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSA 95
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS+
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of MS009487 vs. ExPASy TrEMBL
Match: A0A1S3CGU5 (Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500588 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 7.1e-44
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKALVQDTDMPGKMQ+QAM AA KALDLYDVFDCKSIA HIKKDFDN+YGSGWQCVV
Sbjct: 1  MLEGKALVQDTDMPGKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDNKYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSA 95
          GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS+
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSS 94

[Close]

BLAST of MS009487 vs. ExPASy TrEMBL
Match: A0A6J1KDK4 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111494671 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKA VQDTDMP KMQ+QAM AA KALDLYDVFDCKSIA HIKKDFD+RYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSAP 96
          GSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTS+P
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSP 95

[Close]

BLAST of MS009487 vs. ExPASy TrEMBL
Match: A0A6J1HH84 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111464299 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 86/95 (90.53%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKA VQDTDMP KMQ+QAM AA KALDLYDVFDCKSIA HIKKDFD+RYGSGWQCVV
Sbjct: 1  MLEGKASVQDTDMPSKMQIQAMDAASKALDLYDVFDCKSIAAHIKKDFDHRYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSAP 96
          GSNFGCFFTHSKGSFIYFKL TLNFLIFKGVTS+P
Sbjct: 61 GSNFGCFFTHSKGSFIYFKLGTLNFLIFKGVTSSP 95

[Close]

BLAST of MS009487 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 165.2 bits (417), Expect = 2.5e-41
Identity = 76/93 (81.72%), Postives = 87/93 (93.55%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKA+V+D+DMP KMQ+QAMA A +ALDL+DVFDCKSIAGHIKK+FD RYGSGWQCVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTS 94
          GSNFGCFFTHSKG+FIYF+LETL FLIFKG ++
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFKGAST 93

[Close]

BLAST of MS009487 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 150.2 bits (378), Expect = 8.3e-37
Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKA V++TDMP KMQ+QAM  A ++LDL+DVFD  SIA HIKK+FD RYGSGWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVT 93
          G+NFGCFFTHSKG+FIYF L TLNFLIFKG T
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFKGAT 92

[Close]

BLAST of MS009487 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23
Identity = 48/59 (81.36%), Postives = 55/59 (93.22%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCV 60
          MLEGKA+V+D+DMP KMQ+QAMA A +ALDL+DVFDCKSIAGHIKK+FD RYGSGWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]

BLAST of MS009487 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23
Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 1  MLEGKALVQDTDMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVV 60
          MLEGKA++ DTDM   M+  A++ A KALD +DV +   IA  IKK+FD  YGSGWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGCFFTHSKGSFIYFKLETLNFLIFKGVTSAP 96
          G++FG F TH  G FI+F + +L  L+FKG    P
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFKGSVGEP 95

[Close]

BLAST of MS009487 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 84.0 bits (206), Expect = 7.3e-17
Identity = 39/78 (50.00%), Postives = 49/78 (62.82%), Query Frame = 0


Query: 12  DMPGKMQVQAMAAAYKALDLYDVFDCKSIAGHIKKDFDNRYGSGWQCVVGSNFGCFFTHS 71
           DMPG MQ  A   A   LD  + F  K +A ++KK+FD  YG  W C+VGS+FG F THS
Sbjct: 123 DMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGSFVTHS 182

Query: 72  KGSFIYFKLETLNFLIFK 90
            G FIYF ++ L  L+FK
Sbjct: 183 TGCFIYFSMDKLYVLLFK 200

The following BLAST results are available for this feature:

BLAST of MS009487 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897874.1	8.6e-44	93.62	dynein light chain LC6, flagellar outer arm-like [Benincasa hispida]	[more]
XP_011659570.1	1.5e-43	93.62	dynein light chain LC6, flagellar outer arm [Cucumis sativus] >KGN45379.1 hypoth...	[more]
XP_008462164.1	1.5e-43	93.62	PREDICTED: dynein light chain LC6, flagellar outer arm-like [Cucumis melo] >KAA0...	[more]
XP_022964212.1	4.7e-42	90.53	dynein light chain LC6, flagellar outer arm-like isoform X1 [Cucurbita moschata]...	[more]
XP_023513963.1	4.7e-42	90.53	dynein light chain LC6, flagellar outer arm-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS009487 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P61285	3.3e-14	42.70	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	3.3e-14	42.70	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]
P61273	3.3e-14	42.70	Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 ...	[more]
P63168	3.3e-14	42.70	Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1	[more]
P63169	3.3e-14	42.70	Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=...	[more]

BLAST of MS009487 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UW48	7.1e-44	93.62	Dynein light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G0...	[more]
A0A0A0K947	7.1e-44	93.62	Dynein light chain OS=Cucumis sativus OX=3659 GN=Csa_7G446940 PE=3 SV=1	[more]
A0A1S3CGU5	7.1e-44	93.62	Dynein light chain OS=Cucumis melo OX=3656 GN=LOC103500588 PE=3 SV=1	[more]
A0A6J1KDK4	2.3e-42	90.53	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111494671 PE=3 SV=1	[more]
A0A6J1HH84	2.3e-42	90.53	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111464299 PE=3 SV=1	[more]

BLAST of MS009487 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52240.2	2.5e-41	81.72	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	8.3e-37	77.17	Dynein light chain type 1 family protein	[more]
AT1G52240.1	2.3e-23	81.36	RHO guanyl-nucleotide exchange factor 11	[more]
AT4G27360.1	2.3e-23	52.63	Dynein light chain type 1 family protein	[more]
AT5G20110.1	7.3e-17	50.00	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 3.4E-40 score: 149.5
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..89 e-value: 2.6E-30 score: 104.6
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..92
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 2..90 e-value: 1.0E-30 score: 107.5
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 1..89
None	No IPR available	PANTHER	PTHR11886:SF78	DYNEIN LIGHT CHAIN	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009487.1	MS009487.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex