MS009477 (gene) Bitter gourd (TR) v1

Overview
NameMS009477
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRegulator of Vps4 activity in the MVB pathway protein
Locationscaffold813: 1597799 .. 1598857 (-)
RNA-Seq ExpressionMS009477
SyntenyMS009477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCTTGCGTGAAGCTTTTGAAGATGCGGCTGGATACAATCCGGAAGAAGAAGAATGCGGTTCTCAAGTTTTTGAAGAATGACATTGCTGAGCTTCTCAGAAGTGGTCTCGACCAAAACGCCTATAATAGGGTCTGTTCTTCTTCTTTCTCCGTTTCTTAATCTGGGTTTTTCGATTCTTAATCTCTGGTTGGTTTTTGATTCTGTAAATTATGGTTTTCAATCACCCACATGATGAATCTATACTTTCTTGCCTTTTAGTTCCTTTCTGTGCTTTCGCTTTATGTGTTAAAATTAGACCCCACTGACCAAAGCTTTTGGCCTCCTTTACACATTCTTCTTTAAGTTAATGTCACATCATTTTTAATTCCTTATCTTTCTGTGCTTGTTCTTCACAACTCTTGAGAAGTTTTGGTTTATCTTCTCCTGGTTTTCATCGCTAATCTTGTGTAATTGCTTGTGCTGATGGTGAAACAGGCTGAAGGGCTTCTTGTTGAGCGGAATGTATTGAAATGTTATGATCTGATTGATGAGTTTTCTGGGACGATCTATAATCAACTTTCTGTCTTGAGTAAGCAGAGGTAGATATCATTGCTTTCAGAACAATTTCTCTTTTTCAGGCTTGAACTTGTATAGATGAACTTATATGTGGCTTTCCCACTTTTTTGTTTCTTCTCTAGTGAGTGTCCCGACGAATGCCGAGAAGCAGTCGCGTCGCTGATTTACGCTGCAGCGAGATTCGCTGACTTGCCTGAATTGCGGGAGCTAAGGAGTCTCTTTACTGCGAAATATGGAAGATCCTTTGAACAATTTACCAACAAAGAGGTTGTTCTTTGTGGCTCCTTTCTATTGATAAAAACTCGATTTGAGGGTGTTTCTTCTTTTTATATTGAAATGTGTTTCGGTTTGGGTTCTTGCTTTCCCTTTTAGCTCATCGAGAAGCCGAGTGCGATGGCAATGACTAAAGAGGTGAAGCTCCAGCTACTCCAGGAGATAGCACAGGAATCAGGCATTGAATGGAATTCCAAGGCTTTGGAACAACAACTGTATACTCCTCCC

mRNA sequence

AAATCTTGCGTGAAGCTTTTGAAGATGCGGCTGGATACAATCCGGAAGAAGAAGAATGCGGTTCTCAAGTTTTTGAAGAATGACATTGCTGAGCTTCTCAGAAGTGGTCTCGACCAAAACGCCTATAATAGGGCTGAAGGGCTTCTTGTTGAGCGGAATGTATTGAAATGTTATGATCTGATTGATGAGTTTTCTGGGACGATCTATAATCAACTTTCTGTCTTGAGTAAGCAGAGTGAGTGTCCCGACGAATGCCGAGAAGCAGTCGCGTCGCTGATTTACGCTGCAGCGAGATTCGCTGACTTGCCTGAATTGCGGGAGCTAAGGAGTCTCTTTACTGCGAAATATGGAAGATCCTTTGAACAATTTACCAACAAAGAGCTCATCGAGAAGCCGAGTGCGATGGCAATGACTAAAGAGGTGAAGCTCCAGCTACTCCAGGAGATAGCACAGGAATCAGGCATTGAATGGAATTCCAAGGCTTTGGAACAACAACTGTATACTCCTCCC

Coding sequence (CDS)

AAATCTTGCGTGAAGCTTTTGAAGATGCGGCTGGATACAATCCGGAAGAAGAAGAATGCGGTTCTCAAGTTTTTGAAGAATGACATTGCTGAGCTTCTCAGAAGTGGTCTCGACCAAAACGCCTATAATAGGGCTGAAGGGCTTCTTGTTGAGCGGAATGTATTGAAATGTTATGATCTGATTGATGAGTTTTCTGGGACGATCTATAATCAACTTTCTGTCTTGAGTAAGCAGAGTGAGTGTCCCGACGAATGCCGAGAAGCAGTCGCGTCGCTGATTTACGCTGCAGCGAGATTCGCTGACTTGCCTGAATTGCGGGAGCTAAGGAGTCTCTTTACTGCGAAATATGGAAGATCCTTTGAACAATTTACCAACAAAGAGCTCATCGAGAAGCCGAGTGCGATGGCAATGACTAAAGAGGTGAAGCTCCAGCTACTCCAGGAGATAGCACAGGAATCAGGCATTGAATGGAATTCCAAGGCTTTGGAACAACAACTGTATACTCCTCCC

Protein sequence

KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDLIDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSFEQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP
Homology
BLAST of MS009477 vs. NCBI nr
Match: XP_022146255.1 (vacuolar protein sorting-associated protein IST1 [Momordica charantia])

HSP 1 Score: 328.2 bits (840), Expect = 4.3e-86
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL
Sbjct: 15  KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF
Sbjct: 75  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
           EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP
Sbjct: 135 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 184

BLAST of MS009477 vs. NCBI nr
Match: XP_022992255.1 (uncharacterized protein LOC111488629 [Cucurbita maxima])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 135/170 (79.41%), Postives = 149/170 (87.65%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVK+ K RLDTIRKKK  VLKFLKNDI ELL+S LD NAYNRAEG LVE+NVL+CYDL
Sbjct: 15  KSCVKMTKTRLDTIRKKKKVVLKFLKNDIVELLKSRLDYNAYNRAEGFLVEQNVLRCYDL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEF GTI+N +SVL+K+SECPDEC+EAVASLIYAAARF+DLPELR LRSLFT +YG SF
Sbjct: 75  IDEFCGTIFNHISVLNKESECPDECKEAVASLIYAAARFSDLPELRVLRSLFTERYGTSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
             FTNKEL+EK  A+A TKE KLQLLQEIAQES I+WNSKALEQQLY PP
Sbjct: 135 GSFTNKELVEKLRAVAQTKETKLQLLQEIAQESAIDWNSKALEQQLYVPP 184

BLAST of MS009477 vs. NCBI nr
Match: XP_008462153.1 (PREDICTED: uncharacterized protein LOC103500577 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 1.5e-67
Identity = 134/170 (78.82%), Postives = 150/170 (88.24%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVK+ K RLDTIRKKKNAVLK+LKNDI ELL+S LD NA+NRAEG LVERNVL+CY+L
Sbjct: 15  KSCVKMTKTRLDTIRKKKNAVLKYLKNDIVELLKSRLDYNAFNRAEGFLVERNVLRCYEL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEF GTI NQ+ VL+K+SECPDEC+EAVA+LIYAAARFADLPELRELR+LFT KYG SF
Sbjct: 75  IDEFCGTISNQIPVLNKESECPDECKEAVATLIYAAARFADLPELRELRNLFTEKYGSSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
             FTNKE IEK  A   TKE+K+QLLQEIAQE+ I+WNSKALEQQLYTPP
Sbjct: 135 GSFTNKEFIEKSRATTQTKEMKIQLLQEIAQETAIDWNSKALEQQLYTPP 184

BLAST of MS009477 vs. NCBI nr
Match: KAG6575541.1 (IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265.0 bits (676), Expect = 4.4e-67
Identity = 134/170 (78.82%), Postives = 148/170 (87.06%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVK+ K RLDTIRKKK  VLKFLKNDI ELL+S LD NAYNRAEG LVE+NVL+CYDL
Sbjct: 15  KSCVKMTKTRLDTIRKKKKVVLKFLKNDIVELLKSRLDYNAYNRAEGFLVEQNVLRCYDL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEF GTI+  +SVL+K+SECPDEC+EAVASLIYAAARF+DLPELR LRSLFT +YG SF
Sbjct: 75  IDEFCGTIFKHISVLNKESECPDECKEAVASLIYAAARFSDLPELRVLRSLFTGRYGTSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
             FTNKEL+EK  A+A TKE KLQLLQEIAQES I+WNSKALEQQLY PP
Sbjct: 135 GSFTNKELVEKLRAVAQTKETKLQLLQEIAQESAIDWNSKALEQQLYVPP 184

BLAST of MS009477 vs. NCBI nr
Match: KAG7014085.1 (IST1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.0 bits (676), Expect = 4.4e-67
Identity = 134/170 (78.82%), Postives = 148/170 (87.06%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVK+ K RLDTIRKKK  VLKFLKNDI ELL+S LD NAYNRAEG LVE+NVL+CYDL
Sbjct: 15  KSCVKMTKTRLDTIRKKKKVVLKFLKNDIVELLKSRLDYNAYNRAEGFLVEQNVLRCYDL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEF GTI+  +SVL+K+SECPDEC+EAVASLIYAAARF+DLPELR LRSLFT +YG SF
Sbjct: 75  IDEFCGTIFKHISVLNKESECPDECKEAVASLIYAAARFSDLPELRVLRSLFTGRYGTSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
             FTNKEL+EK  A+A TKE KLQLLQEIAQES I+WNSKALEQQLY PP
Sbjct: 135 GSFTNKELVEKLRAVAQTKETKLQLLQEIAQESAIDWNSKALEQQLYVPP 184

BLAST of MS009477 vs. ExPASy Swiss-Prot
Match: Q54I39 (IST1-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289029 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 6.6e-13
Identity = 40/162 (24.69%), Postives = 91/162 (56.17%), Query Frame = 0

Query: 4   VKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDLIDE 63
           +KL   R+  ++ KK  +++  K ++AELLR   +++A  R E ++ +  +++C+ +I+ 
Sbjct: 17  LKLAVSRIQILKNKKANIVRDEKRNVAELLRKKNEESARIRVETIIRDEYLIECFQIIEV 76

Query: 64  FSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSFEQ- 123
               ++ ++++++  +E P E +E++ +L+Y++ R   +PEL ++++   AKYG+  E  
Sbjct: 77  LCELLHARINLINATTEMPLEMKESIFTLVYSSQRI-QIPELEQIKNQLKAKYGKGLENE 136

Query: 124 -------FTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEW 158
                    N +++ K S       +  Q L EIA++  ++W
Sbjct: 137 ANCHCSTHVNPKIVHKLSYATPDPSIIFQTLSEIAEKFNVDW 177

BLAST of MS009477 vs. ExPASy Swiss-Prot
Match: P53843 (Vacuolar protein sorting-associated protein IST1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IST1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 41/173 (23.70%), Postives = 84/173 (48.55%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           K+C+K+   RL   ++K+ A+ K  +  +A+LL +  +Q A+ R E L+ +   ++  ++
Sbjct: 13  KTCLKMCIQRLRYAQEKQQAIAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHIELLEI 72

Query: 61  IDEFSGTIYNQLSVLSK--------QSECPDECREAVASLIYAAARFADLPELRELRSLF 120
           ++ +   +  ++ V++         +    D   EA+ SLIYA     ++ EL +L+ L 
Sbjct: 73  LELYCELLLARVQVINDISTEEQLVKEHMDDGINEAIRSLIYAILFVDEVKELSQLKDLM 132

Query: 121 TAKYGRSF------EQFTNKELIEKPSAMAMTKEVKLQL-LQEIAQESGIEWN 159
             K    F      +     E I K  + ++ KE  + L L+EIA+   + ++
Sbjct: 133 AWKINVEFVNGVIADHIDVPEKIIKKCSPSVPKEELVDLYLKEIAKTYDVPYS 185

BLAST of MS009477 vs. ExPASy TrEMBL
Match: A0A6J1CWS8 (vacuolar protein sorting-associated protein IST1 OS=Momordica charantia OX=3673 GN=LOC111015509 PE=3 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.1e-86
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL
Sbjct: 15  KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF
Sbjct: 75  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
           EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP
Sbjct: 135 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 184

BLAST of MS009477 vs. ExPASy TrEMBL
Match: A0A6J1JV69 (uncharacterized protein LOC111488629 OS=Cucurbita maxima OX=3661 GN=LOC111488629 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.7e-68
Identity = 135/170 (79.41%), Postives = 149/170 (87.65%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVK+ K RLDTIRKKK  VLKFLKNDI ELL+S LD NAYNRAEG LVE+NVL+CYDL
Sbjct: 15  KSCVKMTKTRLDTIRKKKKVVLKFLKNDIVELLKSRLDYNAYNRAEGFLVEQNVLRCYDL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEF GTI+N +SVL+K+SECPDEC+EAVASLIYAAARF+DLPELR LRSLFT +YG SF
Sbjct: 75  IDEFCGTIFNHISVLNKESECPDECKEAVASLIYAAARFSDLPELRVLRSLFTERYGTSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
             FTNKEL+EK  A+A TKE KLQLLQEIAQES I+WNSKALEQQLY PP
Sbjct: 135 GSFTNKELVEKLRAVAQTKETKLQLLQEIAQESAIDWNSKALEQQLYVPP 184

BLAST of MS009477 vs. ExPASy TrEMBL
Match: A0A1S3CGT5 (uncharacterized protein LOC103500577 OS=Cucumis melo OX=3656 GN=LOC103500577 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.4e-68
Identity = 134/170 (78.82%), Postives = 150/170 (88.24%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVK+ K RLDTIRKKKNAVLK+LKNDI ELL+S LD NA+NRAEG LVERNVL+CY+L
Sbjct: 15  KSCVKMTKTRLDTIRKKKNAVLKYLKNDIVELLKSRLDYNAFNRAEGFLVERNVLRCYEL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEF GTI NQ+ VL+K+SECPDEC+EAVA+LIYAAARFADLPELRELR+LFT KYG SF
Sbjct: 75  IDEFCGTISNQIPVLNKESECPDECKEAVATLIYAAARFADLPELRELRNLFTEKYGSSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
             FTNKE IEK  A   TKE+K+QLLQEIAQE+ I+WNSKALEQQLYTPP
Sbjct: 135 GSFTNKEFIEKSRATTQTKEMKIQLLQEIAQETAIDWNSKALEQQLYTPP 184

BLAST of MS009477 vs. ExPASy TrEMBL
Match: A0A6J1GMM1 (uncharacterized protein LOC111455825 OS=Cucurbita moschata OX=3662 GN=LOC111455825 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67
Identity = 134/170 (78.82%), Postives = 148/170 (87.06%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVK+ K RLDTIRKKK  VLKFLKNDI ELL+S LD NAYNRAEG LVE+NVL+CYDL
Sbjct: 15  KSCVKMTKTRLDTIRKKKKVVLKFLKNDIVELLKSRLDYNAYNRAEGFLVEQNVLRCYDL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEF GTI+  +SVL+K+SECPDEC+EAVASLIYAAARF+DLPELR LRSLFT +YG SF
Sbjct: 75  IDEFCGTIFKHISVLNKESECPDECKEAVASLIYAAARFSDLPELRVLRSLFTERYGTSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
             FTNKEL+EK  A+A TKE KLQLLQEIAQES I+WNSKALEQQLY PP
Sbjct: 135 GSFTNKELVEKLRAVAQTKETKLQLLQEIAQESAIDWNSKALEQQLYVPP 184

BLAST of MS009477 vs. ExPASy TrEMBL
Match: A0A0A0K926 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446760 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 6.3e-67
Identity = 132/170 (77.65%), Postives = 148/170 (87.06%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KSCVK+ K RLDT RKKKNAVLK+LKNDI ELL+S LD NAYNRAEG LVERNVL+CY+L
Sbjct: 15  KSCVKMTKTRLDTTRKKKNAVLKYLKNDIVELLKSRLDYNAYNRAEGFLVERNVLRCYEL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           IDEF GTI NQ+ VL+K+SECPDEC+E+VA+LIYAAARFADLPELRELR+LFT KYG SF
Sbjct: 75  IDEFCGTISNQIPVLNKESECPDECKESVATLIYAAARFADLPELRELRNLFTEKYGSSF 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
             FTNKE IEK      TKE+K+QLLQEIAQE+ I+WNSKALEQQLYTPP
Sbjct: 135 GSFTNKEFIEKSRTTTQTKEMKIQLLQEIAQETAIDWNSKALEQQLYTPP 184

BLAST of MS009477 vs. TAIR 10
Match: AT1G79910.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50
Identity = 91/170 (53.53%), Postives = 133/170 (78.24%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KS VK+ K R+DT+++KKN+V K+LKNDI +LL++ LD NAY RAEGL+ E+  L CY+ 
Sbjct: 15  KSLVKITKTRVDTVKRKKNSVCKYLKNDIVDLLKNSLDYNAYGRAEGLIEEKRRLACYEF 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           +++F   + + +S+L K   CPDECREA++SL+YAAAR +++PELR+LRSLF  +YG + 
Sbjct: 75  LEQFCNCVASNVSLLQKSIRCPDECREAISSLVYAAARVSEVPELRDLRSLFAERYGNTL 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTPP 171
           +QF N E +E+  A   +KE+K++LLQEIA+E  I+W++K+LEQ+LYTPP
Sbjct: 135 DQFVNPEFVERFKAEPPSKEMKVELLQEIAREYSIKWDAKSLEQRLYTPP 184

BLAST of MS009477 vs. TAIR 10
Match: AT4G32350.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.9e-37
Identity = 74/166 (44.58%), Postives = 115/166 (69.28%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           K  +KL K R+D +R+K+NA +KFLK D+A+L+ +G D NA++RA GLL E   L   D 
Sbjct: 15  KPLIKLTKNRIDVLRRKRNATIKFLKRDLADLIINGHDYNAFSRAGGLLDELRYLWSLDF 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           +++    +Y QLS + K  ECP++CREA++SL++AA+ F++LPELRELR +F  KY  S 
Sbjct: 75  VEQTCDFVYKQLSTMQKTPECPEDCREAISSLMFAASGFSELPELRELRQMFHEKYTDSL 134

Query: 121 EQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQL 167
             F N+EL+E  S+   + E K++L++++A E  I W+SK  E+++
Sbjct: 135 ALFVNQELVENMSSKPFSMEKKVKLMEDVALEFSIRWDSKDFEKRI 180

BLAST of MS009477 vs. TAIR 10
Match: AT1G79910.2 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-34
Identity = 64/125 (51.20%), Postives = 96/125 (76.80%), Query Frame = 0

Query: 46  EGLLVERNVLKCYDLIDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPEL 105
           EGL+ E+  L CY+ +++F   + + +S+L K   CPDECREA++SL+YAAAR +++PEL
Sbjct: 46  EGLIEEKRRLACYEFLEQFCNCVASNVSLLQKSIRCPDECREAISSLVYAAARVSEVPEL 105

Query: 106 RELRSLFTAKYGRSFEQFTNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQ 165
           R+LRSLF  +YG + +QF N E +E+  A   +KE+K++LLQEIA+E  I+W++K+LEQ+
Sbjct: 106 RDLRSLFAERYGNTLDQFVNPEFVERFKAEPPSKEMKVELLQEIAREYSIKWDAKSLEQR 165

Query: 166 LYTPP 171
           LYTPP
Sbjct: 166 LYTPP 170

BLAST of MS009477 vs. TAIR 10
Match: AT1G52315.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-33
Identity = 70/167 (41.92%), Postives = 108/167 (64.67%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           KS    +K+R+D +R+K+ A+++  K DI   L++G D  AY RAE LL E  ++ CYDL
Sbjct: 15  KSTTSYMKIRIDIVRRKRIAMVRNYKTDIVNFLKNGQDSEAYRRAELLLEELRIISCYDL 74

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           I+ F   I   LS++ K+ ECP+ECREAV+SLIYA A   D+PEL++LR++FT ++G   
Sbjct: 75  IERFCDCISENLSLMLKKRECPEECREAVSSLIYATAWVPDVPELKDLRAVFTKRFGNFI 134

Query: 121 EQFTNKELIEKPSAM-AMTKEVKLQLLQEIAQESGIEWNSKALEQQL 167
               N EL+EK   +   ++E+K+Q ++++A E  I W+   L+  L
Sbjct: 135 ASSVNHELVEKTELLRPPSRELKIQTVKDVANEFSINWDPTPLKLML 181

BLAST of MS009477 vs. TAIR 10
Match: AT4G35730.1 (Regulator of Vps4 activity in the MVB pathway protein )

HSP 1 Score: 115.5 bits (288), Expect = 4.1e-26
Identity = 64/178 (35.96%), Postives = 108/178 (60.67%), Query Frame = 0

Query: 1   KSCVKLLKMRLDTIRKKKNAVLKFLKNDIAELLRSGLDQNAYNRAEGLLVERNVLKCYDL 60
           K+  K+   R+  IR K+  V+K ++ DIA LL+SG D  A  R E ++ E+N+    ++
Sbjct: 32  KTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATARIRVEHVIREQNIQAANEI 91

Query: 61  IDEFSGTIYNQLSVLSKQSECPDECREAVASLIYAAARFADLPELRELRSLFTAKYGRSF 120
           I+ F   I ++L++++KQ +CP + +E +ASLI+AA R +++PEL +LR +F  KYG+ F
Sbjct: 92  IELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIPELGDLRDIFAKKYGKDF 151

Query: 121 EQF---------TNKELIEKPSAMAMTKEVKLQLLQEIAQESGIEWNSKALEQQLYTP 170
                        N+ LI+K S      E KL++++EIA+E  ++W++   EQ+L  P
Sbjct: 152 VSAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKEFQVDWDTTETEQELLKP 209

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022146255.14.3e-86100.00vacuolar protein sorting-associated protein IST1 [Momordica charantia][more]
XP_022992255.11.2e-6779.41uncharacterized protein LOC111488629 [Cucurbita maxima][more]
XP_008462153.11.5e-6778.82PREDICTED: uncharacterized protein LOC103500577 [Cucumis melo][more]
KAG6575541.14.4e-6778.82IST1-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7014085.14.4e-6778.82IST1-like protein [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
Q54I396.6e-1324.69IST1-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289029 PE=3 SV=1[more]
P538432.5e-0423.70Vacuolar protein sorting-associated protein IST1 OS=Saccharomyces cerevisiae (st... [more]
Match NameE-valueIdentityDescription
A0A6J1CWS82.1e-86100.00vacuolar protein sorting-associated protein IST1 OS=Momordica charantia OX=3673 ... [more]
A0A6J1JV695.7e-6879.41uncharacterized protein LOC111488629 OS=Cucurbita maxima OX=3661 GN=LOC111488629... [more]
A0A1S3CGT57.4e-6878.82uncharacterized protein LOC103500577 OS=Cucumis melo OX=3656 GN=LOC103500577 PE=... [more]
A0A6J1GMM12.8e-6778.82uncharacterized protein LOC111455825 OS=Cucurbita moschata OX=3662 GN=LOC1114558... [more]
A0A0A0K9266.3e-6777.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446760 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G79910.11.4e-5053.53Regulator of Vps4 activity in the MVB pathway protein [more]
AT4G32350.13.9e-3744.58Regulator of Vps4 activity in the MVB pathway protein [more]
AT1G79910.22.4e-3451.20Regulator of Vps4 activity in the MVB pathway protein [more]
AT1G52315.14.5e-3341.92Regulator of Vps4 activity in the MVB pathway protein [more]
AT4G35730.14.1e-2635.96Regulator of Vps4 activity in the MVB pathway protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005061Vacuolar protein sorting-associated protein Ist1PFAMPF03398Ist1coord: 1..155
e-value: 9.9E-45
score: 152.4
IPR005061Vacuolar protein sorting-associated protein Ist1PANTHERPTHR12161IST1 FAMILY MEMBERcoord: 1..170
IPR042277Vacuolar protein sorting-associated protein IST1-likeGENE3D1.20.1260.60coord: 1..163
e-value: 3.2E-48
score: 165.7
NoneNo IPR availablePANTHERPTHR12161:SF60REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEINcoord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS009477.1MS009477.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport