MS009475 (gene) Bitter gourd (TR) v1

Overview


Name	MS009475
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	anther-specific protein BCP1
Location	scaffold813: 1590418 .. 1590753 (-)
RNA-Seq Expression	MS009475
Synteny	MS009475

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGCCAATTCGTTGCTTTTGCCCTCGTCCTCTTCGCCGTCGTCGGCTTCGCCTGCGCGGCTTCCCCGGCCGAACCCCCGAAGGCCGCGGCCAACAGCACCTCCGCCGACGCCGGAGCAGCTGCGGCCCCCGGCGCCGACAACGAGATCGGAAACACTGACGGAGCCGCCGCTGCTCCGGGAGCAGGCGAAGACATCGTCGAAGGCCCAGTCGGTGGACCCGGCGCCGCCGCCGGAGGTGACCTTGTGCCGGCAGAATCGCCCAAGAGCGGTGCCGAGGCTGTGAAGATTTCCGCCGTCGCCGGAGTCGCAGCAATCGCCGGCTTTTTCTGC

mRNA sequence

ATGGCCCGCCAATTCGTTGCTTTTGCCCTCGTCCTCTTCGCCGTCGTCGGCTTCGCCTGCGCGGCTTCCCCGGCCGAACCCCCGAAGGCCGCGGCCAACAGCACCTCCGCCGACGCCGGAGCAGCTGCGGCCCCCGGCGCCGACAACGAGATCGGAAACACTGACGGAGCCGCCGCTGCTCCGGGAGCAGGCGAAGACATCGTCGAAGGCCCAGTCGGTGGACCCGGCGCCGCCGCCGGAGGTGACCTTGTGCCGGCAGAATCGCCCAAGAGCGGTGCCGAGGCTGTGAAGATTTCCGCCGTCGCCGGAGTCGCAGCAATCGCCGGCTTTTTCTGC

Coding sequence (CDS)

ATGGCCCGCCAATTCGTTGCTTTTGCCCTCGTCCTCTTCGCCGTCGTCGGCTTCGCCTGCGCGGCTTCCCCGGCCGAACCCCCGAAGGCCGCGGCCAACAGCACCTCCGCCGACGCCGGAGCAGCTGCGGCCCCCGGCGCCGACAACGAGATCGGAAACACTGACGGAGCCGCCGCTGCTCCGGGAGCAGGCGAAGACATCGTCGAAGGCCCAGTCGGTGGACCCGGCGCCGCCGCCGGAGGTGACCTTGTGCCGGCAGAATCGCCCAAGAGCGGTGCCGAGGCTGTGAAGATTTCCGCCGTCGCCGGAGTCGCAGCAATCGCCGGCTTTTTCTGC

Protein sequence

MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAAPGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFFC

Homology

[Close]

BLAST of MS009475 vs. NCBI nr
Match: XP_022152212.1 (anther-specific protein BCP1 [Momordica charantia])

HSP 1 Score: 191.8 bits (486), Expect = 3.2e-45
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFVAFALVLFAVVGFACAASPAEPPKAAANST+ADAGAAAAPGADNEIGNTDGAAAA
Sbjct: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTAADAGAAAAPGADNEIGNTDGAAAA 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFFC 113
           PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFFC
Sbjct: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFFC 112

[Close]

BLAST of MS009475 vs. NCBI nr
Match: XP_038885796.1 (outer membrane protein H.8-like [Benincasa hispida])

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23
Identity = 78/111 (70.27%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFV FALVLFAV+GFACAA+PAE PKA+A+  +AD GA  APGA+NEIGNT+G A A
Sbjct: 1   MARQFVVFALVLFAVIGFACAATPAESPKASAD--NADVGAQLAPGAENEIGNTEG-ADA 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 112
           P   ED+VE P+GGP AAA G  VPAESPKSGA AVK SA    AA+AGFF
Sbjct: 61  PAGSEDVVEAPIGGPDAAAAG-FVPAESPKSGASAVKFSATVAGAAVAGFF 107

[Close]

BLAST of MS009475 vs. NCBI nr
Match: XP_022997549.1 (anther-specific protein BCP1-like [Cucurbita maxima])

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-22
Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFV  AL+LFA+VGFACAASPAE PK +AN+T  D G   APGAD EIGNTDG  A 
Sbjct: 1   MARQFVVLALLLFALVGFACAASPAESPKGSANNT--DVGDLLAPGADKEIGNTDGGDAT 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 112
            G+ +D+VEGP+GGPG   GG+ VPAE+PKSGA AV++SAVA + A+AG+F
Sbjct: 61  DGS-DDVVEGPIGGPG-VPGGESVPAEAPKSGASAVELSAVAALVAVAGYF 107

[Close]

BLAST of MS009475 vs. NCBI nr
Match: XP_016899951.1 (PREDICTED: classical arabinogalactan protein 11-like [Cucumis melo])

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-20
Identity = 77/111 (69.37%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFV FALVLFAV+GFACAASPAE PK +A+  SA AGA  AP ADN IGNT+GA A 
Sbjct: 1   MARQFVVFALVLFAVIGFACAASPAEAPKGSAD--SAGAGATLAPAADNAIGNTEGADAP 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 112
            G+ E +VE PVGGPG+AA G +VPA +P SGA A+K SAVA VAA+AGFF
Sbjct: 61  AGSNE-VVEAPVGGPGSAAAG-VVPAPAP-SGASALKFSAVAAVAAVAGFF 106

[Close]

BLAST of MS009475 vs. NCBI nr
Match: XP_022962552.1 (anther-specific protein BCP1-like [Cucurbita moschata])

HSP 1 Score: 105.5 bits (262), Expect = 3.0e-19
Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFV  ALVLFA+VGFA AASP+E PK +AN+T  D G   APGAD EIGNTDG  A 
Sbjct: 1   MARQFVVLALVLFAIVGFATAASPSESPKGSANNT--DVGDLLAPGADKEIGNTDGGDAT 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 112
            G+ +D+VEGP+GGPG   GG+ VPAE+PKSGA AV+ SA   + A+AGFF
Sbjct: 61  NGS-DDVVEGPIGGPG-VPGGESVPAEAPKSGASAVEFSA---LVAVAGFF 104

[Close]

BLAST of MS009475 vs. ExPASy TrEMBL
Match: A0A6J1DFK4 (anther-specific protein BCP1 OS=Momordica charantia OX=3673 GN=LOC111019987 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFVAFALVLFAVVGFACAASPAEPPKAAANST+ADAGAAAAPGADNEIGNTDGAAAA
Sbjct: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTAADAGAAAAPGADNEIGNTDGAAAA 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFFC 113
           PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFFC
Sbjct: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFFC 112

[Close]

BLAST of MS009475 vs. ExPASy TrEMBL
Match: A0A6J1KBR3 (anther-specific protein BCP1-like OS=Cucurbita maxima OX=3661 GN=LOC111492442 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.2e-23
Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFV  AL+LFA+VGFACAASPAE PK +AN+T  D G   APGAD EIGNTDG  A 
Sbjct: 1   MARQFVVLALLLFALVGFACAASPAESPKGSANNT--DVGDLLAPGADKEIGNTDGGDAT 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 112
            G+ +D+VEGP+GGPG   GG+ VPAE+PKSGA AV++SAVA + A+AG+F
Sbjct: 61  DGS-DDVVEGPIGGPG-VPGGESVPAEAPKSGASAVELSAVAALVAVAGYF 107

[Close]

BLAST of MS009475 vs. ExPASy TrEMBL
Match: A0A1S4DVD7 (classical arabinogalactan protein 11-like OS=Cucumis melo OX=3656 GN=LOC107990709 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.8e-21
Identity = 77/111 (69.37%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFV FALVLFAV+GFACAASPAE PK +A+  SA AGA  AP ADN IGNT+GA A 
Sbjct: 1   MARQFVVFALVLFAVIGFACAASPAEAPKGSAD--SAGAGATLAPAADNAIGNTEGADAP 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 112
            G+ E +VE PVGGPG+AA G +VPA +P SGA A+K SAVA VAA+AGFF
Sbjct: 61  AGSNE-VVEAPVGGPGSAAAG-VVPAPAP-SGASALKFSAVAAVAAVAGFF 106

[Close]

BLAST of MS009475 vs. ExPASy TrEMBL
Match: A0A0A0LQR1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349700 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-19
Identity = 72/111 (64.86%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFV FALVLFAV+GF CAA+PAE PK +A+  +A  GA  APGA+NEIGNT+G A A
Sbjct: 1   MARQFVVFALVLFAVIGFTCAATPAEAPKGSAD--TAGVGAQLAPGAENEIGNTEG-ADA 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 112
           P   ED+VE PVGGPGA AGG  VPA +P S A A++ SA A V A+AGFF
Sbjct: 61  PAGSEDVVEAPVGGPGATAGG-FVPAPAP-SAASALEFSAAAAVTAVAGFF 106

[Close]

BLAST of MS009475 vs. ExPASy TrEMBL
Match: A0A6J1HCZ7 (anther-specific protein BCP1-like OS=Cucurbita moschata OX=3662 GN=LOC111462951 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.4e-19
Identity = 71/111 (63.96%), Postives = 84/111 (75.68%), Query Frame = 0


Query: 1   MARQFVAFALVLFAVVGFACAASPAEPPKAAANSTSADAGAAAAPGADNEIGNTDGAAAA 60
           MARQFV  ALVLFA+VGFA AASP+E PK +AN+T  D G   APGAD EIGNTDG  A 
Sbjct: 1   MARQFVVLALVLFAIVGFATAASPSESPKGSANNT--DVGDLLAPGADKEIGNTDGGDAT 60

Query: 61  PGAGEDIVEGPVGGPGAAAGGDLVPAESPKSGAEAVKISAVAGVAAIAGFF 112
            G+ +D+VEGP+GGPG   GG+ VPAE+PKSGA AV+ SA   + A+AGFF
Sbjct: 61  NGS-DDVVEGPIGGPG-VPGGESVPAEAPKSGASAVEFSA---LVAVAGFF 104

The following BLAST results are available for this feature:

BLAST of MS009475 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152212.1	3.2e-45	99.11	anther-specific protein BCP1 [Momordica charantia]	[more]
XP_038885796.1	1.5e-23	70.27	outer membrane protein H.8-like [Benincasa hispida]	[more]
XP_022997549.1	1.7e-22	65.77	anther-specific protein BCP1-like [Cucurbita maxima]	[more]
XP_016899951.1	1.2e-20	69.37	PREDICTED: classical arabinogalactan protein 11-like [Cucumis melo]	[more]
XP_022962552.1	3.0e-19	63.96	anther-specific protein BCP1-like [Cucurbita moschata]	[more]

BLAST of MS009475 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS009475 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFK4	1.5e-45	99.11	anther-specific protein BCP1 OS=Momordica charantia OX=3673 GN=LOC111019987 PE=4...	[more]
A0A6J1KBR3	8.2e-23	65.77	anther-specific protein BCP1-like OS=Cucurbita maxima OX=3661 GN=LOC111492442 PE...	[more]
A0A1S4DVD7	5.8e-21	69.37	classical arabinogalactan protein 11-like OS=Cucumis melo OX=3656 GN=LOC10799070...	[more]
A0A0A0LQR1	1.4e-19	64.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349700 PE=4 SV=1	[more]
A0A6J1HCZ7	1.4e-19	63.96	anther-specific protein BCP1-like OS=Cucurbita moschata OX=3662 GN=LOC111462951 ...	[more]

BLAST of MS009475 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..89
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..20 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009475.1	MS009475.1	mRNA