MS009455 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATATGGCAGTGATGTCTTCATCAAATATTTGTAATTTTGGTAAGGAAATAATCACAATTTCGAAGAGAGAACAAAGTTTTGGACATGCAATAAGAGGCAATTTGCAGCTCAAAGGCCATGCCCAATATTCCTCTCTACGCCTCAAAACTAACATTGCTCAAATCACTGCATGTAAGATGATGATGATGAAAAATCCTGCTTTCTCCAACTTTTTTTGGGGTTTTTTGAGAGATGATTTATTGATTTTTTTGTTGTTTTTGGTGGCAGGTGGGTTTAAAAATATTGATAGTCGTAACCCGAAAAAACTTGACATGACTATTGACGACTCGAGCATGGGAGAGCTATTAAACAATGGTCAGATTTATCAACATCATTTCTTGATCAAAGCATACGAGTCGGGAGTTGATAAAAATATGGCCATGTTTTTCATTATCAACCAATTACAGGTTTGGATCCAACATTAAACTTATAAGAATAATTATTAATGTATCTTAACCCGTCAAATTATATTTCGCTTGACATAAAAATTTTGTGAGTTTTTTCTTATTAGGAGTCAAAACTAAACCACTTGAAAAGTTGTGGGTTGGTGAATGGAGGATTGGGAACAACTATAGAAATGGATAAAAGGGACCTCTTATGGGTGGTTCATAAAATGCAAGTGGTAGTCGACCACTATCCTTCTTGGTAATTATAATTTTTCTTTTTAAATTCCATAATTTAAAAAAACAATAGCCATATTGAATAATTTATCGATTCATTTTCATCTTGGGTAGGAAAATGTATACAAGTATATGTAAATGTGTGTTTGGTTGTATTTTTTTTAGGAAGGATGTTGTTCAACTAAGCACTTGGAGTTGTATTCATGGGAAGCATGGTTATCGTCGAGATTGGATCATTCGAGATCATAAAACTGGCGAAGTTTTGATTCGTGCAATCTGGTCTGTTCTTTTCTTCTCTTTCTACTTTAAACATAAGAAAAACGAAAATAAATTCGACGTTAATTTATGTTTGCATATATTGCAGTTTCTATGCTGTGATGAACAGGAAAACAAGAAAATTATCAAAGTTTTGTGATGAAATGAAGACCGAAATAACTCCCTACTTTTTGGATTGTGATCCGATTATCGAAGAGGAGAAAATTATTTCAAATAAACTAGATGTTAATTCTGATGGTTCCCACATAACATGTTTAGTTGTAAGTACTTTTATTTAAAAAACGTATGATTCTATTTAATTAAGGTTATAGTTTTTATCTTTTAAACTTAGTAATAATTATCAACCGTTTTTTTTCCCTTAATTCTCAATTTTTCAAAATATTTTTGAAACTTTGGTGAAAAAAATTTTGCTTTTGTTCTTAAAAATTGATTCTTTAAAAAGTTAAAAAAACAAAACAAATAATTTTGAGCAAATTACAAGGTTAAAGGGTATGCCAATAATGATTCTTTAGGNNNNNNNNNNNNNNNNNNNAGGTTTTTGGGGATAAAAAAAAAAAAAAACTCATTTCTCATGGCATTTTGATTATTAGGTATTTGTTTCTTTAACGTTATATGTGTCAAATGGTTTAAATTTCATAATACTATTTTTTAAAATTTTATTATATTCTTAAACTTTCACGTTTATTTTTATTTACTCAGTAAGTCAAGTATTAGAAATTTCCAAATAGATTTAAATTCTTATTTAATAATGAATTCAGAATTAACAACACATACTAAAATAGTTTTTTTTTTTTTTTAACTCATAGACAAGGCCGAGTGATCTAGATATGAATCTACACGTTAACAATGCTAGTTATATCAACTTCGTCCTTGAGGTATGTTATCTCTTTTATCCTCTTTTTACCTTATTTTTTTATGGTAGTGGTTGAGCACAACAATCTTCTATATGTGTTATTACCCCTTTAATGGGTCAATTTTGATGCTAAATTAAAGTGTGAATTCTACCCAATAAATGATTTTTTTTAAAGAAGTTTATAGTAAAAAAATCAAGACCTACTCAAATTCAAATTAAAAAAATTATTCATGACCGGTGGAAGATCCAGTTATAGAAATACAAAAACCTTGCTAAAAAGATATTTCAACATAGTTTAAACTTTAAGGTTAAATTTGACTCAGTCCATTCAGATGGAACTTAAAAAAAAAAGTAAATTCTCTTAAAAATAGTAAATTTTGTTTCAGAGTACTCCTCGATGGTTGTTTGAGAATTATCAGCTGTCAACCGTAACAATGAAGTACCTCAGAGAATGTGGAATGGACAAGCAATTGCAGTCTCTCACTGTGCCCATGAAAAACGACATTAATGGCGATGACCACAACAAAAGAAAAGACATCAAGTTCCACCACTCCATTCTTGCAGATGGGATTGAACTTGTTCGAGGAAGAACCATTTGGACCCCTAAACCTACA AATATGGCAGTGATGTCTTCATCAAATATTTGTAATTTTGGTAAGGAAATAATCACAATTTCGAAGAGAGAACAAAGTTTTGGACATGCAATAAGAGGCAATTTGCAGCTCAAAGGCCATGCCCAATATTCCTCTCTACGCCTCAAAACTAACATTGCTCAAATCACTGCATGTAAGATGATGATGATGAAAAATCCTGCTTTCTCCAACTTTTTTTGGGGTTTTTTGAGAGATGATTTATTGATTTTTTTGTTGTTTTTGGTGGCAGGTGGGTTTAAAAATATTGATAGTCGTAACCCGAAAAAACTTGACATGACTATTGACGACTCGAGCATGGGAGAGCTATTAAACAATGGTCAGATTTATCAACATCATTTCTTGATCAAAGCATACGAGTCGGGAGTTGATAAAAATATGGCCATGTTTTTCATTATCAACCAATTACAGACCGAAATAACTCCCTACTTTTTGGATTGTGATCCGATTATCGAAGAGGAGAAAATTATTTCAAATAAACTAGATGTTAATTCTGATGGTTCCCACATAACATGTTTAGTTACAAGGCCGAGTGATCTAGATATGAATCTACACGTTAACAATGCTAGTTATATCAACTTCGTCCTTGAGAGTACTCCTCGATGGTTGTTTGAGAATTATCAGCTGTCAACCGTAACAATGAAGTACCTCAGAGAATGTGGAATGGACAAGCAATTGCAGTCTCTCACTGTGCCCATGAAAAACGACATTAATGGCGATGACCACAACAAAAGAAAAGACATCAAGTTCCACCACTCCATTCTTGCAGATGGGATTGAACTTGTTCGAGGAAGAACCATTTGGACCCCTAAACCTACA AATATGGCAGTGATGTCTTCATCAAATATTTGTAATTTTGGTAAGGAAATAATCACAATTTCGAAGAGAGAACAAAGTTTTGGACATGCAATAAGAGGCAATTTGCAGCTCAAAGGCCATGCCCAATATTCCTCTCTACGCCTCAAAACTAACATTGCTCAAATCACTGCATGTAAGATGATGATGATGAAAAATCCTGCTTTCTCCAACTTTTTTTGGGGTTTTTTGAGAGATGATTTATTGATTTTTTTGTTGTTTTTGGTGGCAGGTGGGTTTAAAAATATTGATAGTCGTAACCCGAAAAAACTTGACATGACTATTGACGACTCGAGCATGGGAGAGCTATTAAACAATGGTCAGATTTATCAACATCATTTCTTGATCAAAGCATACGAGTCGGGAGTTGATAAAAATATGGCCATGTTTTTCATTATCAACCAATTACAGACCGAAATAACTCCCTACTTTTTGGATTGTGATCCGATTATCGAAGAGGAGAAAATTATTTCAAATAAACTAGATGTTAATTCTGATGGTTCCCACATAACATGTTTAGTTACAAGGCCGAGTGATCTAGATATGAATCTACACGTTAACAATGCTAGTTATATCAACTTCGTCCTTGAGAGTACTCCTCGATGGTTGTTTGAGAATTATCAGCTGTCAACCGTAACAATGAAGTACCTCAGAGAATGTGGAATGGACAAGCAATTGCAGTCTCTCACTGTGCCCATGAAAAACGACATTAATGGCGATGACCACAACAAAAGAAAAGACATCAAGTTCCACCACTCCATTCTTGCAGATGGGATTGAACTTGTTCGAGGAAGAACCATTTGGACCCCTAAACCTACA NMAVMSSSNICNFGKEIITISKREQSFGHAIRGNLQLKGHAQYSSLRLKTNIAQITACKMMMMKNPAFSNFFWGFLRDDLLIFLLFLVAGGFKNIDSRNPKKLDMTIDDSSMGELLNNGQIYQHHFLIKAYESGVDKNMAMFFIINQLQTEITPYFLDCDPIIEEEKIISNKLDVNSDGSHITCLVTRPSDLDMNLHVNNASYINFVLESTPRWLFENYQLSTVTMKYLRECGMDKQLQSLTVPMKNDINGDDHNKRKDIKFHHSILADGIELVRGRTIWTPKPT Homology
BLAST of MS009455 vs. NCBI nr
Match: KAA0058801.1 (palmitoyl-acyl carrier protein thioesterase [Cucumis melo var. makuwa] >TYK10596.1 palmitoyl-acyl carrier protein thioesterase [Cucumis melo var. makuwa]) HSP 1 Score: 224.9 bits (572), Expect = 8.6e-55 Identity = 146/386 (37.82%), Postives = 188/386 (48.70%), Query Frame = 0
BLAST of MS009455 vs. NCBI nr
Match: KAG6593401.1 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 221.1 bits (562), Expect = 1.2e-53 Identity = 141/391 (36.06%), Postives = 188/391 (48.08%), Query Frame = 0
BLAST of MS009455 vs. NCBI nr
Match: KAG7025748.1 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.1 bits (562), Expect = 1.2e-53 Identity = 126/283 (44.52%), Postives = 166/283 (58.66%), Query Frame = 0
BLAST of MS009455 vs. NCBI nr
Match: XP_023514527.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220.7 bits (561), Expect = 1.6e-53 Identity = 140/391 (35.81%), Postives = 188/391 (48.08%), Query Frame = 0
BLAST of MS009455 vs. NCBI nr
Match: XP_022960310.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 204.5 bits (519), Expect = 1.2e-48 Identity = 132/378 (34.92%), Postives = 178/378 (47.09%), Query Frame = 0
BLAST of MS009455 vs. ExPASy Swiss-Prot
Match: G3ESV0 (Acyl-[acyl-carrier-protein] hydrolase FATB2, chloroplastic (Fragment) OS=Cuphea viscosissima OX=857185 GN=FATB2 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.0e-22 Identity = 67/187 (35.83%), Postives = 101/187 (54.01%), Query Frame = 0
BLAST of MS009455 vs. ExPASy Swiss-Prot
Match: Q39513 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana OX=36775 GN=FATB1 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.2e-21 Identity = 65/187 (34.76%), Postives = 99/187 (52.94%), Query Frame = 0
BLAST of MS009455 vs. ExPASy Swiss-Prot
Match: Q9SQI3 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum OX=3635 GN=FATB1 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 8.4e-21 Identity = 59/142 (41.55%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of MS009455 vs. ExPASy Swiss-Prot
Match: Q9SJE2 (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FATB PE=1 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.4e-20 Identity = 57/141 (40.43%), Postives = 83/141 (58.87%), Query Frame = 0
BLAST of MS009455 vs. ExPASy Swiss-Prot
Match: G3ESV1 (Acyl-[acyl-carrier-protein] hydrolase FATB3, chloroplastic OS=Cuphea viscosissima OX=857185 GN=FATB3 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.3e-18 Identity = 61/186 (32.80%), Postives = 94/186 (50.54%), Query Frame = 0
BLAST of MS009455 vs. ExPASy TrEMBL
Match: A0A5A7UZ85 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002510 PE=3 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 4.1e-55 Identity = 146/386 (37.82%), Postives = 188/386 (48.70%), Query Frame = 0
BLAST of MS009455 vs. ExPASy TrEMBL
Match: A0A6J1H8Q2 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111461080 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 5.8e-49 Identity = 132/378 (34.92%), Postives = 178/378 (47.09%), Query Frame = 0
BLAST of MS009455 vs. ExPASy TrEMBL
Match: A0A6J1KZF4 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111497736 PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 7.6e-49 Identity = 130/377 (34.48%), Postives = 177/377 (46.95%), Query Frame = 0
BLAST of MS009455 vs. ExPASy TrEMBL
Match: A0A1S4E345 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo OX=3656 GN=LOC107991799 PE=3 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.3e-40 Identity = 85/137 (62.04%), Postives = 110/137 (80.29%), Query Frame = 0
BLAST of MS009455 vs. ExPASy TrEMBL
Match: A0A0A0KAB7 (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G440560 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.0e-37 Identity = 80/137 (58.39%), Postives = 107/137 (78.10%), Query Frame = 0
BLAST of MS009455 vs. TAIR 10
Match: AT1G08510.1 (fatty acyl-ACP thioesterases B ) HSP 1 Score: 100.9 bits (250), Expect = 1.7e-21 Identity = 57/141 (40.43%), Postives = 83/141 (58.87%), Query Frame = 0
BLAST of MS009455 vs. TAIR 10
Match: AT3G25110.1 (fatA acyl-ACP thioesterase ) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-13 Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of MS009455 vs. TAIR 10
Match: AT4G13050.1 (Acyl-ACP thioesterase ) HSP 1 Score: 69.3 bits (168), Expect = 5.6e-12 Identity = 47/149 (31.54%), Postives = 70/149 (46.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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