MS009427 (gene) Bitter gourd (TR) v1

Overview


Name	MS009427
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	late embryogenesis abundant protein Dc3-like
Location	scaffold813: 1224444 .. 1224938 (+)
RNA-Seq Expression	MS009427
Synteny	MS009427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCCATGATCAGGGCTTCAGAGCTGGCGAAACCAAGGGCCGAGCCGAGGTTTTTTTTTTTTTTTCTTTTTTATTTATTTTCTTAAAATGCAATTCTTGTTATTATTTTTAATTTTAATTCTTTTAATTTTAGGAGAAGACGAATCAGATGATGGATACGATGGGGGAGAAGGCCCGAGAGACAAAGGACAAGACTTACGAGACTGGCCGGGCCGCGAGGGATAAGGCCCAGGAGTCGAAGGAGCAGTCCGGAAGCTATTTGTCGGAGAAGGCCCAGGCGACGAAGGAAAAGGCCTCGGACGCGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGAAAAGAGGCGACCGGAGGGATTCTGGAGCAGACGGGTGAGAAGGTGAAGAGTATGGCCCAAGGAGCAGCGGATGCTGTGAAAAGCACTTTTGGTATGGCCCAGCACGATGATGACGTGGACAAACAGAGTGACCCCACCACTGTCTACCGGGGC

mRNA sequence

ATGGCATCCCATGATCAGGGCTTCAGAGCTGGCGAAACCAAGGGCCGAGCCGAGGAGAAGACGAATCAGATGATGGATACGATGGGGGAGAAGGCCCGAGAGACAAAGGACAAGACTTACGAGACTGGCCGGGCCGCGAGGGATAAGGCCCAGGAGTCGAAGGAGCAGTCCGGAAGCTATTTGTCGGAGAAGGCCCAGGCGACGAAGGAAAAGGCCTCGGACGCGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGAAAAGAGGCGACCGGAGGGATTCTGGAGCAGACGGGTGAGAAGGTGAAGAGTATGGCCCAAGGAGCAGCGGATGCTGTGAAAAGCACTTTTGGTATGGCCCAGCACGATGATGACGTGGACAAACAGAGTGACCCCACCACTGTCTACCGGGGC

Coding sequence (CDS)

ATGGCATCCCATGATCAGGGCTTCAGAGCTGGCGAAACCAAGGGCCGAGCCGAGGAGAAGACGAATCAGATGATGGATACGATGGGGGAGAAGGCCCGAGAGACAAAGGACAAGACTTACGAGACTGGCCGGGCCGCGAGGGATAAGGCCCAGGAGTCGAAGGAGCAGTCCGGAAGCTATTTGTCGGAGAAGGCCCAGGCGACGAAGGAAAAGGCCTCGGACGCGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGAAAAGAGGCGACCGGAGGGATTCTGGAGCAGACGGGTGAGAAGGTGAAGAGTATGGCCCAAGGAGCAGCGGATGCTGTGAAAAGCACTTTTGGTATGGCCCAGCACGATGATGACGTGGACAAACAGAGTGACCCCACCACTGTCTACCGGGGC

Protein sequence

MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSYLSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQHDDDVDKQSDPTTVYRG

Homology

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BLAST of MS009427 vs. NCBI nr
Match: XP_022150150.1 (late embryogenesis abundant protein Dc3-like [Momordica charantia])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MA+HDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY
Sbjct: 1   MATHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120
           LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ
Sbjct: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120

Query: 121 HDDDVDKQSDPTTVYRG 138
           HDDDVDKQSDPTTVYRG
Sbjct: 121 HDDDVDKQSDPTTVYRG 137

[Close]

BLAST of MS009427 vs. NCBI nr
Match: XP_038899464.1 (LOW QUALITY PROTEIN: late embryogenesis abundant protein 2-like [Benincasa hispida])

HSP 1 Score: 176.0 bits (445), Expect = 2.2e-40
Identity = 101/134 (75.37%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q +RAGETKGRAEEKTN+ M TMG+KARE K+KTYETGRAAR+KA  +       
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNETMGTMGDKAREAKEKTYETGRAAREKAHGA------- 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120
               A +TKE ASD AQ AREKAQSGKE TGGILEQTGEKVKSMAQGAADAVKSTFGMAQ
Sbjct: 61  ----ADSTKEWASDTAQGAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120

Query: 121 HDDDVDKQSDPTTV 135
           HDD+VDK SDPTT+
Sbjct: 121 HDDEVDKDSDPTTI 123

[Close]

BLAST of MS009427 vs. NCBI nr
Match: XP_011659535.1 (late embryogenesis abundant protein D-7 [Cucumis sativus] >KAE8646451.1 hypothetical protein Csa_016288 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 7.8e-38
Identity = 98/133 (73.68%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q +RAGETKGRAEEKTNQ M  MGEKARE K+KTYETGRAAR+KA  +       
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGA------- 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120
               A +TKE ASDAAQ  REKAQ+GKE TGGILEQTGEKVKSMAQGAA+AVKSTFGMAQ
Sbjct: 61  ----ADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQ 120

Query: 121 HDDDVDKQSDPTT 134
           HD+DVDK S+ TT
Sbjct: 121 HDEDVDKSSNATT 122

[Close]

BLAST of MS009427 vs. NCBI nr
Match: XP_008461081.1 (PREDICTED: late embryogenesis abundant protein D-7 [Cucumis melo] >KAA0058774.1 late embryogenesis abundant protein D-7 [Cucumis melo var. makuwa] >TYK10568.1 late embryogenesis abundant protein D-7 [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-36
Identity = 98/137 (71.53%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q +RAGETKGRAEEKTNQ M TMGEKARE K+KTYETGRA +DKA  +       
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAVKDKAHGA------- 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMA- 120
               A +TKE ASD AQA REKAQ+GKE TGGILEQTGEKVKSMAQGAA+AVKSTFGMA 
Sbjct: 61  ----ADSTKEWASDTAQAGREKAQTGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAS 120

Query: 121 QHDDDVDKQSDPTTVYR 137
           Q+DDDVDK +   T YR
Sbjct: 121 QNDDDVDKGTTDNTTYR 126

[Close]

BLAST of MS009427 vs. NCBI nr
Match: XP_023548700.1 (late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 1.2e-35
Identity = 97/140 (69.29%), Postives = 110/140 (78.57%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q ++AGETKGRAEEKT+Q M TMG+KARE K+KTYETG+AA+DKA  + E +  +
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120
             E    T    SD AQAAREKAQSGKE TGGILEQTGEKVKSMAQGAA+AVKSTFGMA 
Sbjct: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA- 120

Query: 121 HDDDVDKQ---SDPTTVYRG 138
           HDDDV K+   SD TT  RG
Sbjct: 121 HDDDVGKEGTGSDTTTYRRG 139

[Close]

BLAST of MS009427 vs. ExPASy Swiss-Prot
Match: P83442 (Late embryogenesis abundant protein Dc3 OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.0e-24
Identity = 73/147 (49.66%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 1   MASH-DQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGS 60
           MASH DQ ++AGE KG A+EKT QM DTM +KA+  KDK  E   +ARD+  ESK+Q+GS
Sbjct: 1   MASHQDQSYKAGEPKGHAQEKTGQMADTMKDKAQAAKDKASEMAGSARDRTVESKDQTGS 60

Query: 61  YLSEKA----------------------QATKEKASDAAQAAREKAQSGKEATGGILEQT 120
           Y+S+KA                      QATKEKAS+  ++A+E A +GKE TGG++   
Sbjct: 61  YVSDKAGAVKDKTCETAQAAKEKTGGAMQATKEKASEMGESAKETAVAGKEKTGGLMSSA 120

Query: 121 GEKVKSMAQGAADAVKSTFGMAQHDDD 125
            E+VK MAQGA +AVK+TFGMA  D++
Sbjct: 121 AEQVKGMAQGATEAVKNTFGMAGADEE 147

[Close]

BLAST of MS009427 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-22
Identity = 72/157 (45.86%), Postives = 99/157 (63.06%), Query Frame = 0


Query: 1   MASH-DQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDK---------- 60
           MASH +Q ++AGET+G+A+EKT + M TMG+K +  KDKT ET ++A+ K          
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  ------------AQESKEQSGSYLSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQT 120
                       AQESK+++GSY+SE  +A K KA DAA+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 121 GEKVKSMAQGAADAVKSTFGMAQHDDDVDK-QSDPTT 134
           GE+VK MA GA DAVK T G+   + + +   S P+T
Sbjct: 121 GEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPST 157

[Close]

BLAST of MS009427 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.6e-22
Identity = 73/154 (47.40%), Postives = 92/154 (59.74%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEK-----------ARETKDKTYETGRAARDK 60
           M SHDQ +RAGE KGR EEKTNQM+  + +K           A+  KDKT +T +AA++K
Sbjct: 1   MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 61  AQESKEQSGSYLSEKAQATKEKASDAAQAAREK-----------AQSGKEATGGILEQTG 120
            Q++ + +     +  QATKEKA D    A+EK           AQSGK+ + G L+QTG
Sbjct: 61  TQQTAQAAKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTG 120

Query: 121 EKVKSMAQGAADAVKSTFGMAQHDDDVDKQSDPT 133
           EK K MAQGA DAVK TFGM   +DD DK   PT
Sbjct: 121 EKAKGMAQGATDAVKQTFGMT--NDDQDKDHFPT 152

[Close]

BLAST of MS009427 vs. ExPASy Swiss-Prot
Match: P13939 (Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.2e-22
Identity = 68/136 (50.00%), Postives = 86/136 (63.24%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q ++AG  +GRA EK  QM ++M EKA   K KT ET  AA+ K  E+ E +   
Sbjct: 1   MASHEQSYKAGRAEGRAHEKGEQMKESMKEKAEAAKQKTMETAEAAKQKTMETAEAAKQK 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120
               A+ T +K    A AAR KA+  KE +GGIL+Q GEKV++ AQGA DAVK TFGMA 
Sbjct: 61  TRGAAETTNDKTKQTAGAARGKAEETKETSGGILQQAGEKVRNAAQGATDAVKHTFGMA- 120

Query: 121 HDDDVDKQSDPTTVYR 137
            D D D+ + P TV R
Sbjct: 121 -DADEDEHNYPATVTR 134

[Close]

BLAST of MS009427 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-20
Identity = 77/176 (43.75%), Postives = 94/176 (53.41%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDK-------AQES 60
           MASHDQ ++AGET GR EEKTNQM+  + +KA+  K+K  +  + A+DK       A+E 
Sbjct: 1   MASHDQSYKAGETMGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 61  KEQSGSYLSEKAQ--------------------------ATKEKASDAAQAAREK----- 120
            +Q+     EK Q                          ATKEKA D    AREK     
Sbjct: 61  TQQTAQAAKEKTQQTAQAAKDETQQTAQAAKDKTQQTTEATKEKAQDTTGRAREKGSEMG 120

Query: 121 ------AQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQHDDDVDKQSDPT 133
                 AQSGK+ + G L+QTGEKVK MAQGA DAVK TFGMA  +DD DK   PT
Sbjct: 121 QSTKETAQSGKDNSAGFLQQTGEKVKGMAQGATDAVKQTFGMA--NDDKDKDHFPT 174

[Close]

BLAST of MS009427 vs. ExPASy TrEMBL
Match: A0A6J1D7P2 (late embryogenesis abundant protein Dc3-like OS=Momordica charantia OX=3673 GN=LOC111018398 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.9e-62
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MA+HDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY
Sbjct: 1   MATHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120
           LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ
Sbjct: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120

Query: 121 HDDDVDKQSDPTTVYRG 138
           HDDDVDKQSDPTTVYRG
Sbjct: 121 HDDDVDKQSDPTTVYRG 137

[Close]

BLAST of MS009427 vs. ExPASy TrEMBL
Match: A0A0A0K6E1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433250 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.8e-38
Identity = 98/133 (73.68%), Postives = 108/133 (81.20%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q +RAGETKGRAEEKTNQ M  MGEKARE K+KTYETGRAAR+KA  +       
Sbjct: 49  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGA------- 108

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120
               A +TKE ASDAAQ  REKAQ+GKE TGGILEQTGEKVKSMAQGAA+AVKSTFGMAQ
Sbjct: 109 ----ADSTKEWASDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQ 168

Query: 121 HDDDVDKQSDPTT 134
           HD+DVDK S+ TT
Sbjct: 169 HDEDVDKSSNATT 170

[Close]

BLAST of MS009427 vs. ExPASy TrEMBL
Match: A0A5A7UUB6 (Late embryogenesis abundant protein D-7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002220 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.3e-37
Identity = 98/137 (71.53%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q +RAGETKGRAEEKTNQ M TMGEKARE K+KTYETGRA +DKA  +       
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAVKDKAHGA------- 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMA- 120
               A +TKE ASD AQA REKAQ+GKE TGGILEQTGEKVKSMAQGAA+AVKSTFGMA 
Sbjct: 61  ----ADSTKEWASDTAQAGREKAQTGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAS 120

Query: 121 QHDDDVDKQSDPTTVYR 137
           Q+DDDVDK +   T YR
Sbjct: 121 QNDDDVDKGTTDNTTYR 126

[Close]

BLAST of MS009427 vs. ExPASy TrEMBL
Match: A0A1S3CEC9 (late embryogenesis abundant protein D-7 OS=Cucumis melo OX=3656 GN=LOC103499778 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 9.3e-37
Identity = 98/137 (71.53%), Postives = 108/137 (78.83%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q +RAGETKGRAEEKTNQ M TMGEKARE K+KTYETGRA +DKA  +       
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAVKDKAHGA------- 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMA- 120
               A +TKE ASD AQA REKAQ+GKE TGGILEQTGEKVKSMAQGAA+AVKSTFGMA 
Sbjct: 61  ----ADSTKEWASDTAQAGREKAQTGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAS 120

Query: 121 QHDDDVDKQSDPTTVYR 137
           Q+DDDVDK +   T YR
Sbjct: 121 QNDDDVDKGTTDNTTYR 126

[Close]

BLAST of MS009427 vs. ExPASy TrEMBL
Match: A0A6J1GPH8 (late embryogenesis abundant protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111456350 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.3e-30
Identity = 88/136 (64.71%), Postives = 102/136 (75.00%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSY 60
           MASH+Q ++AGETKGRAEEKT+Q M TMG+KA    + T       ++ A+ESK+Q+GSY
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAHGAAEST-------KEWAKESKDQTGSY 60

Query: 61  LSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120
           +S+K           AQAAREKAQSGKE TGGILEQTGEKVKSMAQGAADAVKSTFGMA 
Sbjct: 61  MSDK-----------AQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMA- 117

Query: 121 HDDDVDKQSDPTTVYR 137
           HDDDV K+   TT YR
Sbjct: 121 HDDDVGKEGSDTTTYR 117

[Close]

BLAST of MS009427 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 72/157 (45.86%), Postives = 99/157 (63.06%), Query Frame = 0


Query: 1   MASH-DQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDK---------- 60
           MASH +Q ++AGET+G+A+EKT + M TMG+K +  KDKT ET ++A+ K          
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  ------------AQESKEQSGSYLSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQT 120
                       AQESK+++GSY+SE  +A K KA DAA+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 121 GEKVKSMAQGAADAVKSTFGMAQHDDDVDK-QSDPTT 134
           GE+VK MA GA DAVK T G+   + + +   S P+T
Sbjct: 121 GEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPST 157

[Close]

BLAST of MS009427 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 72/157 (45.86%), Postives = 99/157 (63.06%), Query Frame = 0


Query: 1   MASH-DQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDK---------- 60
           MASH +Q ++AGET+G+A+EKT + M TMG+K +  KDKT ET ++A+ K          
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  ------------AQESKEQSGSYLSEKAQATKEKASDAAQAAREKAQSGKEATGGILEQT 120
                       AQESK+++GSY+SE  +A K KA DAA+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 121 GEKVKSMAQGAADAVKSTFGMAQHDDDVDK-QSDPTT 134
           GE+VK MA GA DAVK T G+   + + +   S P+T
Sbjct: 121 GEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPST 157

[Close]

BLAST of MS009427 vs. TAIR 10
Match: AT3G15670.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 94.7 bits (234), Expect = 6.0e-20
Identity = 75/206 (36.41%), Postives = 99/206 (48.06%), Query Frame = 0


Query: 1   MASHDQGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAAR------------- 60
           MAS+ Q ++AGET+G+A+EKT Q M TM +KA E +DKT +T + A+             
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDK 60

Query: 61  -------------------------------------------------DKAQESKEQSG 120
                                                            DKA+E+K+++G
Sbjct: 61  TSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGDKAREAKDKAG 120

Query: 121 SYLSEKAQATKEKASDAAQAAREKAQ-----------SGKEATGGILEQTGEKVKSMAQG 134
           SYLSE  +A K KA DAAQ  +E AQ           +G++ TGG L QTGE VK MA G
Sbjct: 121 SYLSETGEAIKNKAQDAAQYTKETAQGAAQYTKETAEAGRDKTGGFLSQTGEHVKQMAMG 180

[Close]

BLAST of MS009427 vs. TAIR 10
Match: AT4G13560.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0


Query: 6   QGFRAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSYLSEKA 65
           Q F AG+ +G+A+EK  Q  ++  + A+   DKT +  ++ARDKA           ++  
Sbjct: 4   QQFNAGQNRGQAQEKAEQWTESAKQTAQSACDKTADLTQSARDKA-----------ADLT 63

Query: 66  QATKEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGM 119
           Q+ ++K +D + +A + AQ  +E   G+  QTGE VK+MAQGA D VK++ GM
Sbjct: 64  QSARDKTADGSHSANKSAQHNQEQAAGLFGQTGESVKNMAQGALDGVKNSLGM 105

[Close]

BLAST of MS009427 vs. TAIR 10
Match: AT5G44310.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 45.8 bits (107), Expect = 3.2e-05
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 0


Query: 9   RAGETKGRAEEKTNQMMDTMGEKARETKDKTYETGRAARDKAQESKEQSGSYLSEKAQAT 68
           +A + K + ++   +  D + E A    DK YET   A+DKA + KE++  +    A+ T
Sbjct: 100 KAYDVKEKTKDYAEEAKDKVNEGASRAADKAYETKEKAKDKAYDVKEKTKDF----AEET 159

Query: 69  KEKASDAAQAAREKAQSGKEATGGILEQTGEKVKSMAQGAADAVKSTFGMAQH--DDDVD 128
           KEK ++ A  A +KA   KE T    EQT +KV   A  AAD  + T   A+   +D  +
Sbjct: 160 KEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAADKAEETKDKAKDYAEDSKE 219

Query: 129 KQSD 131
           K  D
Sbjct: 220 KAED 219

The following BLAST results are available for this feature:

BLAST of MS009427 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150150.1	1.0e-61	99.27	late embryogenesis abundant protein Dc3-like [Momordica charantia]	[more]
XP_038899464.1	2.2e-40	75.37	LOW QUALITY PROTEIN: late embryogenesis abundant protein 2-like [Benincasa hispi...	[more]
XP_011659535.1	7.8e-38	73.68	late embryogenesis abundant protein D-7 [Cucumis sativus] >KAE8646451.1 hypothet...	[more]
XP_008461081.1	1.9e-36	71.53	PREDICTED: late embryogenesis abundant protein D-7 [Cucumis melo] >KAA0058774.1 ...	[more]
XP_023548700.1	1.2e-35	69.29	late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS009427 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P83442	3.0e-24	49.66	Late embryogenesis abundant protein Dc3 OS=Daucus carota OX=4039 PE=2 SV=1	[more]
Q96270	2.1e-22	45.86	Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE...	[more]
O49817	3.6e-22	47.40	Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
P13939	6.2e-22	50.00	Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]
O49816	2.6e-20	43.75	Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]

BLAST of MS009427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D7P2	4.9e-62	99.27	late embryogenesis abundant protein Dc3-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0K6E1	3.8e-38	73.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433250 PE=4 SV=1	[more]
A0A5A7UUB6	9.3e-37	71.53	Late embryogenesis abundant protein D-7 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CEC9	9.3e-37	71.53	late embryogenesis abundant protein D-7 OS=Cucumis melo OX=3656 GN=LOC103499778 ...	[more]
A0A6J1GPH8	1.3e-30	64.71	late embryogenesis abundant protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]

BLAST of MS009427 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52690.1	1.5e-23	45.86	Late embryogenesis abundant protein (LEA) family protein	[more]
AT1G52690.2	1.5e-23	45.86	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G15670.1	6.0e-20	36.41	Late embryogenesis abundant protein (LEA) family protein	[more]
AT4G13560.1	1.5e-10	37.17	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G44310.1	3.2e-05	33.87	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 62..82
None	No IPR available	GENE3D	6.10.140.1430		coord: 9..66 e-value: 2.5E-5 score: 26.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..137
None	No IPR available	PANTHER	PTHR47372	DAUER UP-REGULATED-RELATED	coord: 1..132
None	No IPR available	PANTHER	PTHR47372:SF1	LATE EMBRYOGENESIS ABUNDANT PROTEIN 29-RELATED	coord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009427.1	MS009427.1	mRNA