MS009420 (gene) Bitter gourd (TR) v1

Overview


Name	MS009420
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MAPK kinase substrate protein At1g80180-like
Location	scaffold813: 1197704 .. 1198042 (-)
RNA-Seq Expression	MS009420
Synteny	MS009420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGTTTGCAGAGATCTGTGGTGTCGTTCCGGCGGCAGGGATCTTCCGGCCTCGTGTGGGACGACAAATTCGTATCGGAGGAGCTGAACAAGGCGGAGCAAAGGGAGGGAGAATCCGGCGAGGCGGCGGCTAGAGACATCCCGCCGATCAAGACAATCGACCGGAGCCGATCGAACCGCGGCGGAGGGGGGCGTGGGTTCCGGAGTAAAGACACGGCGGTGCCGTCGATGGAGCCGCAGTCGCCGAGGGTTTCTGCTTGTGGGCTCTGCGGCGCTTTCGGGAAATCGGCCGGCAAGAAACAGAGGGCGACGGCCGCCGGTAAGCGCCGGTCACGG

mRNA sequence

ATGGCTGGTTTGCAGAGATCTGTGGTGTCGTTCCGGCGGCAGGGATCTTCCGGCCTCGTGTGGGACGACAAATTCGTATCGGAGGAGCTGAACAAGGCGGAGCAAAGGGAGGGAGAATCCGGCGAGGCGGCGGCTAGAGACATCCCGCCGATCAAGACAATCGACCGGAGCCGATCGAACCGCGGCGGAGGGGGGCGTGGGTTCCGGAGTAAAGACACGGCGGTGCCGTCGATGGAGCCGCAGTCGCCGAGGGTTTCTGCTTGTGGGCTCTGCGGCGCTTTCGGGAAATCGGCCGGCAAGAAACAGAGGGCGACGGCCGCCGGTAAGCGCCGGTCACGG

Coding sequence (CDS)

ATGGCTGGTTTGCAGAGATCTGTGGTGTCGTTCCGGCGGCAGGGATCTTCCGGCCTCGTGTGGGACGACAAATTCGTATCGGAGGAGCTGAACAAGGCGGAGCAAAGGGAGGGAGAATCCGGCGAGGCGGCGGCTAGAGACATCCCGCCGATCAAGACAATCGACCGGAGCCGATCGAACCGCGGCGGAGGGGGGCGTGGGTTCCGGAGTAAAGACACGGCGGTGCCGTCGATGGAGCCGCAGTCGCCGAGGGTTTCTGCTTGTGGGCTCTGCGGCGCTTTCGGGAAATCGGCCGGCAAGAAACAGAGGGCGACGGCCGCCGGTAAGCGCCGGTCACGG

Protein sequence

MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEAAARDIPPIKTIDRSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQRATAAGKRRSR

Homology

[Close]

BLAST of MS009420 vs. NCBI nr
Match: XP_022991595.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima])

HSP 1 Score: 167.9 bits (424), Expect = 4.9e-38
Identity = 90/117 (76.92%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEA----AARDIPPIKTIDR 60
           MAGLQRSVVSFRRQGSSG+VWDDKF+SEELNKA   +GES         R+IPPIKTIDR
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWDDKFISEELNKAAPSDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQRATAAGKRRSR 114
           +RSNR GGGRGFRSKD A P++EP SPRVSACGLC AFGKS  KKQRA AAGKRRSR
Sbjct: 61  ARSNR-GGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAGKRRSR 116

[Close]

BLAST of MS009420 vs. NCBI nr
Match: XP_023549291.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.7 bits (413), Expect = 9.3e-37
Identity = 90/118 (76.27%), Postives = 97/118 (82.20%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEA----AARDIPPIKTIDR 60
           MAGLQRSVVSFRRQGSSG+VWDDKF+SEELNKA   +GES         R+IPPIKTIDR
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWDDKFISEELNKAAPNDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQR-ATAAGKRRSR 114
           +RSNR GGGRGFRSKD A P++EP SPRVSACGLC AFGKS  KKQR A AAGKRRSR
Sbjct: 61  TRSNR-GGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAAGKRRSR 117

[Close]

BLAST of MS009420 vs. NCBI nr
Match: KAG6575586.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161.8 bits (408), Expect = 3.5e-36
Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEA----AARDIPPIKTIDR 60
           MAGLQRSVVSFRRQGSSG+VW+DKF+SEELNKA   +GES         R+IPPIKTIDR
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWEDKFISEELNKAAPSDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQR-ATAAGKRRSR 114
           +RSNR GGGRGFRSKD A P++EP SPRVSACGLC AFGKS  KKQR A AAGKRRSR
Sbjct: 61  TRSNR-GGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAAGKRRSR 117

[Close]

BLAST of MS009420 vs. NCBI nr
Match: KAG7014127.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 161.4 bits (407), Expect = 4.6e-36
Identity = 89/119 (74.79%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEA----AARDIPPIKTIDR 60
           MAGLQRSVVSFRRQGSSG+VW+DKF+SEELNKA   +GES         R+IPPIKTIDR
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWEDKFISEELNKAAPSDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQR--ATAAGKRRSR 114
           +RSNR GGGRGFRSKD A P++EP SPRVSACGLC AFGKS  KKQR  A AAGKRRSR
Sbjct: 61  TRSNR-GGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAAAGKRRSR 118

[Close]

BLAST of MS009420 vs. NCBI nr
Match: XP_023000641.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima])

HSP 1 Score: 158.3 bits (399), Expect = 3.9e-35
Identity = 85/118 (72.03%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEAA-----ARDIPPIKTID 60
           MAGLQRSVVSFRRQGSSGL+WDDKF+SEEL KA Q + ES  AA      R+IPPIKT+D
Sbjct: 1   MAGLQRSVVSFRRQGSSGLIWDDKFISEELIKAPQNDAESSTAAEELNTGRNIPPIKTVD 60

Query: 61  RSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQRATAAGKRRSR 114
           R+RSNR G  RGFRSKDTA  ++EP SPR+SACG+C AF  S GKKQR TAAGKRRSR
Sbjct: 61  RTRSNR-GEARGFRSKDTAAAAVEPPSPRISACGICSAFRNSGGKKQRTTAAGKRRSR 117

[Close]

BLAST of MS009420 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.5e-16
Identity = 62/139 (44.60%), Postives = 79/139 (56.83%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSE-ELNKAEQREGESGE----------------- 60
           MAGLQRS +SFRRQGSSG+VWDD+ ++E     A  R+GE+ +                 
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIAELSQQAANDRKGETLQQDEQAKLITSEVQDQTT 60

Query: 61  --AAARDIPPIKT---IDRSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFG-K 114
              A   + PI+T   ++RSRSN GG  R  R+     P+++P SPR+SA G C AFG K
Sbjct: 61  KPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAVDPPSPRLSAFGCCSAFGKK 120

[Close]

BLAST of MS009420 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 6.1e-15
Identity = 62/141 (43.97%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKA---EQRE-----------GESGEAA-- 60
           M GLQRS +SFRRQGSSG+V+DD+ ++ ELNK+   EQ++            ES E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  ---ARDIPPIKT-------IDRSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAF 114
                 + PIKT       I+RSRSN GG  R  R+     P+++P SPR+S+CG C AF
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAF 120

[Close]

BLAST of MS009420 vs. ExPASy TrEMBL
Match: A0A6J1JTD9 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111488162 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.4e-38
Identity = 90/117 (76.92%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEA----AARDIPPIKTIDR 60
           MAGLQRSVVSFRRQGSSG+VWDDKF+SEELNKA   +GES         R+IPPIKTIDR
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWDDKFISEELNKAAPSDGESSATPEVKTGRNIPPIKTIDR 60

Query: 61  SRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQRATAAGKRRSR 114
           +RSNR GGGRGFRSKD A P++EP SPRVSACGLC AFGKS  KKQRA AAGKRRSR
Sbjct: 61  ARSNR-GGGRGFRSKDMAAPAVEPPSPRVSACGLCSAFGKSGAKKQRAAAAGKRRSR 116

[Close]

BLAST of MS009420 vs. ExPASy TrEMBL
Match: A0A6J1KGD4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111494889 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.9e-35
Identity = 85/118 (72.03%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEAA-----ARDIPPIKTID 60
           MAGLQRSVVSFRRQGSSGL+WDDKF+SEEL KA Q + ES  AA      R+IPPIKT+D
Sbjct: 1   MAGLQRSVVSFRRQGSSGLIWDDKFISEELIKAPQNDAESSTAAEELNTGRNIPPIKTVD 60

Query: 61  RSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQRATAAGKRRSR 114
           R+RSNR G  RGFRSKDTA  ++EP SPR+SACG+C AF  S GKKQR TAAGKRRSR
Sbjct: 61  RTRSNR-GEARGFRSKDTAAAAVEPPSPRISACGICSAFRNSGGKKQRTTAAGKRRSR 117

[Close]

BLAST of MS009420 vs. ExPASy TrEMBL
Match: A0A5D3CFK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002140 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.6e-34
Identity = 84/117 (71.79%), Postives = 94/117 (80.34%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEA----AARDIPPIKTIDR 60
           MAGLQRSVVSFRRQGSSG+VWDDKF++EEL KA + EGES        AR+IPPIKT D 
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWDDKFIAEELRKAGKDEGESSAVPELRTARNIPPIKTNDP 60

Query: 61  SRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQRATAAGKRRSR 114
           +RSN   GGRGFRSK+TA P++EP SPRVSACGLC  FGKS G+KQRA  AGKRRSR
Sbjct: 61  TRSNH-AGGRGFRSKETASPAVEPPSPRVSACGLCSGFGKSNGQKQRAALAGKRRSR 116

[Close]

BLAST of MS009420 vs. ExPASy TrEMBL
Match: A0A1S3CEE2 (uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC103499785 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.6e-34
Identity = 84/117 (71.79%), Postives = 94/117 (80.34%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEA----AARDIPPIKTIDR 60
           MAGLQRSVVSFRRQGSSG+VWDDKF++EEL KA + EGES        AR+IPPIKT D 
Sbjct: 1   MAGLQRSVVSFRRQGSSGVVWDDKFIAEELRKAGKDEGESSAVPELRTARNIPPIKTNDP 60

Query: 61  SRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFGKSAGKKQRATAAGKRRSR 114
           +RSN   GGRGFRSK+TA P++EP SPRVSACGLC  FGKS G+KQRA  AGKRRSR
Sbjct: 61  TRSNH-AGGRGFRSKETASPAVEPPSPRVSACGLCSGFGKSNGQKQRAALAGKRRSR 116

[Close]

BLAST of MS009420 vs. ExPASy TrEMBL
Match: A0A6J1HM35 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111464222 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 6.7e-33
Identity = 83/121 (68.60%), Postives = 94/121 (77.69%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEAA-----ARDIPPIKTID 60
           MAGLQRSVVSFRRQGSSGL+WDDKF+SEE+ KA Q + ES  AA      R+IPPIKT+D
Sbjct: 1   MAGLQRSVVSFRRQGSSGLIWDDKFISEEIIKAPQNDAESSTAAEELNTGRNIPPIKTVD 60

Query: 61  RSRSNRGGGGRGFRSKDTA---VPSMEPQSPRVSACGLCGAFGKSAGKKQRATAAGKRRS 114
           R+R NR G  RGFRSKDTA     ++EP SPR+SACG+C AF  S GKKQR TAAGKRRS
Sbjct: 61  RTRLNR-GEARGFRSKDTAAATATAVEPPSPRISACGICSAFRNSGGKKQRTTAAGKRRS 120

[Close]

BLAST of MS009420 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 3.9e-17
Identity = 62/139 (44.60%), Postives = 79/139 (56.83%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSE-ELNKAEQREGESGE----------------- 60
           MAGLQRS +SFRRQGSSG+VWDD+ ++E     A  R+GE+ +                 
Sbjct: 1   MAGLQRSTISFRRQGSSGIVWDDRLIAELSQQAANDRKGETLQQDEQAKLITSEVQDQTT 60

Query: 61  --AAARDIPPIKT---IDRSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAFG-K 114
              A   + PI+T   ++RSRSN GG  R  R+     P+++P SPR+SA G C AFG K
Sbjct: 61  KPIAGEGLKPIRTDGGMERSRSNGGGAIRHHRNTGRVSPAVDPPSPRLSAFGCCSAFGKK 120

[Close]

BLAST of MS009420 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 4.3e-16
Identity = 62/141 (43.97%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKA---EQRE-----------GESGEAA-- 60
           M GLQRS +SFRRQGSSG+V+DD+ ++ ELNK+   EQ++            ES E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  ---ARDIPPIKT-------IDRSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAF 114
                 + PIKT       I+RSRSN GG  R  R+     P+++P SPR+S+CG C AF
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAF 120

[Close]

BLAST of MS009420 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 4.3e-16
Identity = 62/141 (43.97%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKA---EQRE-----------GESGEAA-- 60
           M GLQRS +SFRRQGSSG+V+DD+ ++ ELNK+   EQ++            ES E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  ---ARDIPPIKT-------IDRSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAF 114
                 + PIKT       I+RSRSN GG  R  R+     P+++P SPR+S+CG C AF
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAF 120

[Close]

BLAST of MS009420 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 4.3e-16
Identity = 62/141 (43.97%), Postives = 80/141 (56.74%), Query Frame = 0


Query: 1   MAGLQRSVVSFRRQGSSGLVWDDKFVSEELNKA---EQRE-----------GESGEAA-- 60
           M GLQRS +SFRRQGSSG+V+DD+ ++ ELNK+   EQ++            ES E    
Sbjct: 1   MEGLQRSTISFRRQGSSGIVFDDRLIA-ELNKSGNNEQKDESQRDEQPKPMSESSEQVKP 60

Query: 61  ---ARDIPPIKT-------IDRSRSNRGGGGRGFRSKDTAVPSMEPQSPRVSACGLCGAF 114
                 + PIKT       I+RSRSN GG  R  R+     P+++P SPR+S+CG C AF
Sbjct: 61  IDEKDKLRPIKTGGGAPGGIERSRSNGGGAQRHHRTTGRVSPAVDPPSPRISSCGCCSAF 120

[Close]

BLAST of MS009420 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-12
Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 4   LQRSVVSFRRQGSSGLVWDDKFVSEELNKAEQREGESGEAAARDIPPIKTIDRSRSNRGG 63
           LQRS  SFRRQGSSGL+W+D+F+S E+   E++E    +     +       +  ++ GG
Sbjct: 3   LQRSTASFRRQGSSGLIWNDRFLSGEIRNDERQEDRCNDHRDGSMAATTATVKRSASDGG 62

Query: 64  GGRGFRSKDTAVPSMEPQSPRVSA--CGLCGAFGKSAGKKQRATAAGKRRS 113
            G G R  + + P+++P SP++SA  CG C  F  +  ++ R    G+RRS
Sbjct: 63  CGHGGRLGELS-PALDPPSPKISAVGCGFCSLFSSNGKRRSR----GRRRS 108

The following BLAST results are available for this feature:

BLAST of MS009420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022991595.1	4.9e-38	76.92	MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]	[more]
XP_023549291.1	9.3e-37	76.27	MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]	[more]
KAG6575586.1	3.5e-36	75.42	MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7014127.1	4.6e-36	74.79	MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023000641.1	3.9e-35	72.03	MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]	[more]

BLAST of MS009420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSC1	5.5e-16	44.60	MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g8...	[more]
Q9XI29	6.1e-15	43.97	Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 P...	[more]

BLAST of MS009420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTD9	2.4e-38	76.92	MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1KGD4	1.9e-35	72.03	MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5D3CFK2	3.6e-34	71.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEE2	3.6e-34	71.79	uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC103499785 P...	[more]
A0A6J1HM35	6.7e-33	68.60	MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of MS009420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80180.1	3.9e-17	44.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.1	4.3e-16	43.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.2	4.3e-16	43.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15400.3	4.3e-16	43.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G20100.1	2.2e-12	36.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031421	Protein of unknown function DUF4666	PFAM	PF15697	DUF4666	coord: 1..102 e-value: 3.1E-29 score: 102.0
IPR031421	Protein of unknown function DUF4666	PANTHER	PTHR33730	OS05G0542732 PROTEIN-RELATED	coord: 1..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..113
None	No IPR available	PANTHER	PTHR33730:SF4	OS05G0542732 PROTEIN	coord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009420.1	MS009420.1	mRNA