MS009362 (gene) Bitter gourd (TR) v1

Overview


Name	MS009362
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein HEADING DATE REPRESSOR 1
Location	scaffold813: 613641 .. 616605 (+)
RNA-Seq Expression	MS009362
Synteny	MS009362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCGCGATAATTCCGGCAAGATTGACAGGATTCTCGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCACTGGAAATCTCGCCGTAGATCAGGTAGTAGCGCTTTCCTTTTCTCTCTCACTCTCTCTAATTAACTTCTCCGCGGTGTTCTACGGTTGAACTTCCGTTCAATTTCTGGAAATTTTGCTCCGAGTCTCTGTTTCGGATAGTAAACAAAATCCGTCTAGGTTTGAAATTATCGCATAATCTAAGGCATTTCCTCATGAATTTTGAAGAATTTCAGCCTTAACCAGAATCGTCTGTTCTTACTCCTCATATTTTGCTCTTCGATTGCTTTGATTATTTTTTTACGAATTAACTCGACTGTTCGTCAACTGCCATGAGGTGAGAAAAGGTACACGAAACGTTTAAATTGTGTTTGTTCATCTCCTCCTCATGCTTTCTGTTATCTGTTTTCCGAAGAAAAGAAAAACTAATTATTTTTATTTATTTTTTATTCTTAATTACATAGATTATAGGTCTCGAAAATAATATTAATGATTAATTTAATTGTTATTTGGAAACTGATTAATTTGCCTTTTCAGCTCATTTATAATTTATTTATTTGACTTTTTTTTTTGTGGATTTTATCTTTCCTTTTCTCTCACTTATTTGACACGAAAGGCCTTTATTGTTATCATATGTGGAAAATAATAAATACAATAGGAATTGCACTCTTTAAATTTCTTAAAACGACGTCGTAATGTTTTTAGAAATATATTTTTCATATTAATACTTGAGAGCTGTTTATTTTCTATAATAATTTTACGTGCTTTACTTAGGTTACTTCTTTGAAAAGAAAAATTTACATATTGACTAGAATTTGATCTTTTACATTATAAAATAACTTCTAGTTTCTTGAATTTTAAATATGGTTAAAGTCGTGATAAAAATATTGCTAGACTGGTTATTTTACAAAATTTAAAAGAAAAAAAAAATTATTTAATTTGGAATTATATGGGGGGAAAATTCCTTTGTTTTTAGTTATGGACTCTGCCTGTGATGTGTCGGTATTATTTGTTAGTTATTTTCTGAATAATGTCTTTTCTTTTTAATTGTCAATTTTAAAGGGTAAAATGATTTATTTGCAAATTAGCTTTTATTTTACCCCATGTTTGTGGTTTCAGTGTAAATAATGTTGCTTGTTTTCTTCCTAAAAAATAATGAAAGCTGATGATTTATTCAAATACTAGTTTTGTCCAAACAAAGGACTAAGAAACTGTGGTAAGATGCCCAACTTTAGTATAAATCAGCAATAAATGTATATAACTTTTTTCTTTTGAGGTCAGATGTTCATACTTTCATATTTAGTCGTAGGACTCCCAAACTAATTTGGTCGATTTTAAAAAAATATTTTTTAAAATACTATTGTTAGTATTGAACTCATGGAGAAAATTTTCGATTTAAGATGCATTATATCAAAGAAACTAATGCTTGTTTAAGCGGATCGAGTCGGTTTATTTGGTTTTTTTTTTTCATTTTTAATAAATTTCACTCTAAAAGAGTGGTAGTTCAGCCTAGATCAGGAATGAATTATAGGATTGATCATAGGATTCATATCTTTCTATATATAGTGAATCTTTTAAAGGTCAAAAGATATAAGTTTTACAATCTCATTGGAAATTAGGAATCCTATTCATAAATATATGCCTTTCTATAATATCAAGTTTGTATTCAAATGATGGGACTCAACACCAACTATATATATTCATTTCAGGTTTCTTATTTTGGCCCACATTCAGCTATCAATCATTAAACATTTCTTGCTGTCTTCTTCTTGAAAATCAAGGTTTTATGATTTGGGGCCAATTCCATGGTCACCATCTTGCATTTCATCTCTATTCATGATGTAAATTTGATGATTTATTGTAGTTGAAGAAAGAATTTCAATTGCCTGTGACTTTGTCTTGGAGTTGGCTTAATTACTCTTCCTTTTTTTCTTCTCTTTCTAGTTTTTAGTTGACAGTTTCTCTCTCTTACTCACTCACTCATAAGCTAAAATCATTAAAGTTTCTTTGCTTTCAATGTAATCTTCCCTTTTTCTGGTGTTTGTTCATACTTTTCACAATTTGGTCCTGTCAAGCTCACTGTTGCCTTTTAAGCGTGAAGTCATTTCTCTCTTATACTTCCCGATAACCTCATCACATACCGACCAGTGTGTAGGCAAGTATTAGCTCTAAACAGGCATATAATGAAGTTTTATTTATTGAGCTTTTTTCTGTATTTGTTGTCCTTCTAAATTGGTTGGAACTAGAAATGGTATCTTCTTTCCAACAGCTAGCGGGAGGAATTTAGACAAGGTAACTGAAGATCATGATTCTGCTAATAAAATTTGGGACAAACAGGAAGAACCTCATGACAAGGACAAAACTCAGGACCTCGAGGCCGAGGTCGTCCCCCCTGAGCTCTCCGAGCGTCGGAGGGCCCTGTTTGAACCCTTAGAACCTGTGAAAAACATCAATGGCAGAAGGCCATCAGCTGAATCCTTACTCCCTCCGCCTGACTTCGACGCCACCGCTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGAAAACTTGTCAATGTTGACGTCGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAACAGAAAGGTGCTGTAGTTTTACTGTTAAATCTATACTTAATAACTGTTGGATACAGATTCAAAATACTAAGTGACATTGTTTTCGACTGAAAGGCAGTTGGTTGGTGTTGTTATTGCAGGACCGGGAAATCGACGGTTTGAACGAGCAGCTTGACGAGGACGCTCGCTGCTTAGAACATCTTCAACTTCAGCTTGTGCGAGAAAAGAGCAAGAGGTCAGAGGTTGAAAGAGAAAATGCAATGCTGCATGATCAAATAAACATGCTAATGAACATGCTAGAAAATGAAGGAGCAGATGGCTCAGATGAACCT

mRNA sequence

ATGGAGCGCGATAATTCCGGCAAGATTGACAGGATTCTCGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCACTGGAAATCTCGCCGTAGATCAGCTAGCGGGAGGAATTTAGACAAGGTAACTGAAGATCATGATTCTGCTAATAAAATTTGGGACAAACAGGAAGAACCTCATGACAAGGACAAAACTCAGGACCTCGAGGCCGAGGTCGTCCCCCCTGAGCTCTCCGAGCGTCGGAGGGCCCTGTTTGAACCCTTAGAACCTGTGAAAAACATCAATGGCAGAAGGCCATCAGCTGAATCCTTACTCCCTCCGCCTGACTTCGACGCCACCGCTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGAAAACTTGTCAATGTTGACGTCGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAACAGAAAGGACCGGGAAATCGACGGTTTGAACGAGCAGCTTGACGAGGACGCTCGCTGCTTAGAACATCTTCAACTTCAGCTTGTGCGAGAAAAGAGCAAGAGGTCAGAGGTTGAAAGAGAAAATGCAATGCTGCATGATCAAATAAACATGCTAATGAACATGCTAGAAAATGAAGGAGCAGATGGCTCAGATGAACCT

Coding sequence (CDS)

ATGGAGCGCGATAATTCCGGCAAGATTGACAGGATTCTCGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCACTGGAAATCTCGCCGTAGATCAGCTAGCGGGAGGAATTTAGACAAGGTAACTGAAGATCATGATTCTGCTAATAAAATTTGGGACAAACAGGAAGAACCTCATGACAAGGACAAAACTCAGGACCTCGAGGCCGAGGTCGTCCCCCCTGAGCTCTCCGAGCGTCGGAGGGCCCTGTTTGAACCCTTAGAACCTGTGAAAAACATCAATGGCAGAAGGCCATCAGCTGAATCCTTACTCCCTCCGCCTGACTTCGACGCCACCGCTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGAAAACTTGTCAATGTTGACGTCGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAACAGAAAGGACCGGGAAATCGACGGTTTGAACGAGCAGCTTGACGAGGACGCTCGCTGCTTAGAACATCTTCAACTTCAGCTTGTGCGAGAAAAGAGCAAGAGGTCAGAGGTTGAAAGAGAAAATGCAATGCTGCATGATCAAATAAACATGCTAATGAACATGCTAGAAAATGAAGGAGCAGATGGCTCAGATGAACCT

Protein sequence

MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLENEGADGSDEP

Homology

[Close]

BLAST of MS009362 vs. NCBI nr
Match: XP_022148239.1 (protein HEADING DATE REPRESSOR 1 [Momordica charantia])

HSP 1 Score: 411.8 bits (1057), Expect = 3.6e-111
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD
Sbjct: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
           KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI
Sbjct: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLV+EKSKRSE
Sbjct: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVQEKSKRSE 180

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQINMLMNMLENEGADGSDEP
Sbjct: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 210

[Close]

BLAST of MS009362 vs. NCBI nr
Match: XP_038897908.1 (protein HEADING DATE REPRESSOR 1 [Benincasa hispida])

HSP 1 Score: 349.4 bits (895), Expect = 2.2e-92
Identity = 183/210 (87.14%), Postives = 192/210 (91.43%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           ME ++SGKIDRILEGFSPASAPRI WKSRRRSASGRNLDKVTEDHDSA K  DKQEE H 
Sbjct: 47  MELNHSGKIDRILEGFSPASAPRIQWKSRRRSASGRNLDKVTEDHDSAIKTCDKQEESHG 106

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
            DK    +   V PELSERR+ALFEPLEPVKNINGRRPSAESLLPPPDFD T YPRGWLI
Sbjct: 107 NDKLAQ-DTNTVLPELSERRKALFEPLEPVKNINGRRPSAESLLPPPDFDDTIYPRGWLI 166

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQLQL++EKSKRSE
Sbjct: 167 GKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQLQLLQEKSKRSE 226

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQINMLM+ML+NEGADGSDEP
Sbjct: 227 VERENAMLHDQINMLMSMLDNEGADGSDEP 255

[Close]

BLAST of MS009362 vs. NCBI nr
Match: XP_008461210.1 (PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo] >KAA0058690.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucumis melo var. makuwa] >TYK10496.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 342.4 bits (877), Expect = 2.7e-90
Identity = 178/210 (84.76%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           ME ++SGKIDRILEGFSPASAPRI W SRRRSASGRNL K TED DSANK  DKQEE   
Sbjct: 25  MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSASGRNLYKETEDQDSANKTCDKQEESPA 84

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
            D     + + VPPELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPRGWLI
Sbjct: 85  NDNISQ-DTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLI 144

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSE
Sbjct: 145 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE 204

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQINMLM+ML+NEGADGSDEP
Sbjct: 205 VERENAMLHDQINMLMSMLDNEGADGSDEP 233

[Close]

BLAST of MS009362 vs. NCBI nr
Match: XP_004135890.1 (protein HEADING DATE REPRESSOR 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 7.4e-88
Identity = 178/212 (83.96%), Postives = 193/212 (91.04%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQE-EPH 60
           ME ++SGKIDRILEGFSPASAPRI W SRRRSASGRNLDK TED DSANK  DKQE  P 
Sbjct: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSASGRNLDKETEDQDSANKTCDKQEVSPG 60

Query: 61  DKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWL 120
           + + +QD   ++V PELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPRGWL
Sbjct: 61  NDNISQD--TDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWL 120

Query: 121 IGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRS 180
           IGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL++EKSKRS
Sbjct: 121 IGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRS 180

Query: 181 EVERENAMLHDQINMLMNMLENEGA-DGSDEP 211
           EVERENAMLHDQINMLM+ML+NEGA DGSDEP
Sbjct: 181 EVERENAMLHDQINMLMSMLDNEGADDGSDEP 210

[Close]

BLAST of MS009362 vs. NCBI nr
Match: XP_022959741.1 (protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           M RDNSGK+DRILEGFSPASAPRI WKSRRRSA+GR LD +T+DHD+A+K  DK +EP  
Sbjct: 1   MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHQEPQ- 60

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
                    + + P+LS+RR+ALFEPLE +KNINGRRPSAESLLPPPDFDATAYPRGWLI
Sbjct: 61  -------PPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLI 120

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIA+QEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSE
Sbjct: 121 GKKRKLVNVDVVESMRRIAIQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE 180

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQ++MLM+MLENEGADGSDEP
Sbjct: 181 VERENAMLHDQVSMLMSMLENEGADGSDEP 202

[Close]

BLAST of MS009362 vs. ExPASy Swiss-Prot
Match: B8AE37 (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.2e-52
Identity = 125/208 (60.10%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 18  PASA--PRIHWKSRRRSAS--GRNLDKV-----------TEDHDSANKIWDKQEEPHDKD 77
           PASA  PRI WKSRRRSAS  GR+L +             + H+ A KI D      D D
Sbjct: 4   PASADPPRIFWKSRRRSASANGRSLQQELNKEAADEQLNNQAHEEAMKIDDANAVSTDDD 63

Query: 78  KTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLIGK 137
              D +A      LSE+R+ALFEPLEP   ING+R SAE LLPPPDF+  +YP+GWL+GK
Sbjct: 64  VHPDPKA-----NLSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGK 123

Query: 138 KRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVE 197
           KRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQL+ED+R LE LQ QL  E+ KR+E+E
Sbjct: 124 KRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIE 183

Query: 198 RENAMLHDQINMLMNML-ENEGADGSDE 210
           +EN+MLH+Q++MLMNML ENE  D   E
Sbjct: 184 KENSMLHEQVSMLMNMLDENEAFDEEGE 203

[Close]

BLAST of MS009362 vs. ExPASy Swiss-Prot
Match: Q6K678 (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR1 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.2e-52
Identity = 125/208 (60.10%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 18  PASA--PRIHWKSRRRSAS--GRNLDKV-----------TEDHDSANKIWDKQEEPHDKD 77
           PASA  PRI WKSRRRSAS  GR+L +             + H+ A KI D      D D
Sbjct: 4   PASADPPRIFWKSRRRSASANGRSLQQELNKEAADEQLNNQAHEEAMKIDDANAVSTDDD 63

Query: 78  KTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLIGK 137
              D +A      LSE+R+ALFEPLEP   ING+R SAE LLPPPDF+  +YP+GWL+GK
Sbjct: 64  VHPDPKA-----NLSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGK 123

Query: 138 KRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVE 197
           KRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQL+ED+R LE LQ QL  E+ KR+E+E
Sbjct: 124 KRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIE 183

Query: 198 RENAMLHDQINMLMNML-ENEGADGSDE 210
           +EN+MLH+Q++MLMNML ENE  D   E
Sbjct: 184 KENSMLHEQVSMLMNMLDENEAFDEEGE 203

[Close]

BLAST of MS009362 vs. ExPASy TrEMBL
Match: A0A6J1D3E7 (protein HEADING DATE REPRESSOR 1 OS=Momordica charantia OX=3673 GN=LOC111016948 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD
Sbjct: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
           KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI
Sbjct: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLV+EKSKRSE
Sbjct: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVQEKSKRSE 180

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQINMLMNMLENEGADGSDEP
Sbjct: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 210

[Close]

BLAST of MS009362 vs. ExPASy TrEMBL
Match: A0A5A7UUH2 (Protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001460 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 178/210 (84.76%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           ME ++SGKIDRILEGFSPASAPRI W SRRRSASGRNL K TED DSANK  DKQEE   
Sbjct: 25  MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSASGRNLYKETEDQDSANKTCDKQEESPA 84

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
            D     + + VPPELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPRGWLI
Sbjct: 85  NDNISQ-DTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLI 144

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSE
Sbjct: 145 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE 204

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQINMLM+ML+NEGADGSDEP
Sbjct: 205 VERENAMLHDQINMLMSMLDNEGADGSDEP 233

[Close]

BLAST of MS009362 vs. ExPASy TrEMBL
Match: A0A1S3CE60 (uncharacterized protein LOC103499861 OS=Cucumis melo OX=3656 GN=LOC103499861 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.3e-90
Identity = 178/210 (84.76%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           ME ++SGKIDRILEGFSPASAPRI W SRRRSASGRNL K TED DSANK  DKQEE   
Sbjct: 25  MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSASGRNLYKETEDQDSANKTCDKQEESPA 84

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
            D     + + VPPELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPRGWLI
Sbjct: 85  NDNISQ-DTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLI 144

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSE
Sbjct: 145 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE 204

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQINMLM+ML+NEGADGSDEP
Sbjct: 205 VERENAMLHDQINMLMSMLDNEGADGSDEP 233

[Close]

BLAST of MS009362 vs. ExPASy TrEMBL
Match: A0A6J1H5Q2 (protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460721 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87
Identity = 169/210 (80.48%), Postives = 189/210 (90.00%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           M RDNSGK+DRILEGFSPASAPRI WKSRRRSA+GR LD +T+DHD+A+K  DK +EP  
Sbjct: 1   MARDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHQEPQ- 60

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
                    + + P+LS+RR+ALFEPLE +KNINGRRPSAESLLPPPDFDATAYPRGWLI
Sbjct: 61  -------PPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLI 120

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIA+QEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSE
Sbjct: 121 GKKRKLVNVDVVESMRRIAIQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSE 180

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQ++MLM+MLENEGADGSDEP
Sbjct: 181 VERENAMLHDQVSMLMSMLENEGADGSDEP 202

[Close]

BLAST of MS009362 vs. ExPASy TrEMBL
Match: A0A6J1KTY5 (protein HEADING DATE REPRESSOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111497606 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.3e-86
Identity = 167/210 (79.52%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHD 60
           M  DNSGK+DRILEGFSPASAPRI WKSRRRSA+GR LD +T+DHD+A+K  DK EEP  
Sbjct: 84  MASDNSGKLDRILEGFSPASAPRIQWKSRRRSATGRILDNITQDHDAADKTSDKHEEPQ- 143

Query: 61  KDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLI 120
                    + + P+LS+RR+ALFEPLE +KNINGRRPSAESLLPPPDFDATAYPRGWLI
Sbjct: 144 -------PPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLI 203

Query: 121 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 180
           GKKRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQLDEDARCLEHLQ+QL++EKSKRSE
Sbjct: 204 GKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSE 263

Query: 181 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           VERENAMLHDQ++MLM+MLENEGADG DEP
Sbjct: 264 VERENAMLHDQVSMLMSMLENEGADGPDEP 285

[Close]

BLAST of MS009362 vs. TAIR 10
Match: AT1G80940.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 232.6 bits (592), Expect = 2.8e-61
Identity = 124/210 (59.05%), Postives = 160/210 (76.19%), Query Frame = 0


Query: 2   ERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDK 61
           E+D     D  + GF P S  +I WKSR+RSA   NLDK  E   +  ++  ++ E    
Sbjct: 8   EKDMKTVSDGFVGGFFPVSTTKIAWKSRKRSAL-LNLDKAPE---AVTEVTPEKNEITAM 67

Query: 62  DKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRP-SAESLLPPPDFDATAYPRGWLI 121
           D  +  E     P LSE+R+ALFEPLEP+ N+NG+RP +A+SLLPPPDF+   YP+GWLI
Sbjct: 68  DTEKVGEPMTTTPLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLI 127

Query: 122 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSE 181
           GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQL+ED+RCLEHLQLQL++E+SKR+E
Sbjct: 128 GKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLEEDSRCLEHLQLQLLQERSKRTE 187

Query: 182 VERENAMLHDQINMLMNMLENEGADGSDEP 211
           +EREN ML +Q++ML+NM++ +  +G++EP
Sbjct: 188 IERENTMLKEQVDMLVNMIQEDDEEGAEEP 213

[Close]

BLAST of MS009362 vs. TAIR 10
Match: AT1G80940.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34
Identity = 82/149 (55.03%), Postives = 103/149 (69.13%), Query Frame = 0


Query: 2   ERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDK 61
           E+D     D  + GF P S  +I WKSR+RSA   NLDK  E   +  ++  ++ E    
Sbjct: 8   EKDMKTVSDGFVGGFFPVSTTKIAWKSRKRSAL-LNLDKAPE---AVTEVTPEKNEITAM 67

Query: 62  DKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRP-SAESLLPPPDFDATAYPRGWLI 121
           D  +  E     P LSE+R+ALFEPLEP+ N+NG+RP +A+SLLPPPDF+   YP+GWLI
Sbjct: 68  DTEKVGEPMTTTPLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLI 127

Query: 122 GKKRKLVNVDVVESMRRIAVQEMNRKDRE 150
           GKKRKLVNVDVVESMRRIAVQEMNRK ++
Sbjct: 128 GKKRKLVNVDVVESMRRIAVQEMNRKVKQ 152

The following BLAST results are available for this feature:

BLAST of MS009362 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148239.1	3.6e-111	99.52	protein HEADING DATE REPRESSOR 1 [Momordica charantia]	[more]
XP_038897908.1	2.2e-92	87.14	protein HEADING DATE REPRESSOR 1 [Benincasa hispida]	[more]
XP_008461210.1	2.7e-90	84.76	PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo] >KAA0058690.1 pro...	[more]
XP_004135890.1	7.4e-88	83.96	protein HEADING DATE REPRESSOR 1 isoform X2 [Cucumis sativus]	[more]
XP_022959741.1	2.1e-87	80.48	protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of MS009362 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AE37	5.2e-52	60.10	Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 ...	[more]
Q6K678	5.2e-52	60.10	Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR...	[more]

BLAST of MS009362 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3E7	1.8e-111	99.52	protein HEADING DATE REPRESSOR 1 OS=Momordica charantia OX=3673 GN=LOC111016948 ...	[more]
A0A5A7UUH2	1.3e-90	84.76	Protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CE60	1.3e-90	84.76	uncharacterized protein LOC103499861 OS=Cucumis melo OX=3656 GN=LOC103499861 PE=...	[more]
A0A6J1H5Q2	1.0e-87	80.48	protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KTY5	3.3e-86	79.52	protein HEADING DATE REPRESSOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111497606 PE=...	[more]

BLAST of MS009362 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80940.1	2.8e-61	59.05	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G80940.2	1.3e-34	55.03	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 164..184
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..67
None	No IPR available	PANTHER	PTHR37205:SF1	F23A5.30 PROTEIN	coord: 3..205
IPR038864	Protein heading date repressor 1	PANTHER	PTHR37205	F23A5.30 PROTEIN	coord: 3..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009362.1	MS009362.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development