MS009352 (gene) Bitter gourd (TR) v1

Overview


Name	MS009352
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Non-specific lipid-transfer protein
Location	scaffold813: 527212 .. 527574 (+)
RNA-Seq Expression	MS009352
Synteny	MS009352

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGCAGCCATGGCATTAAAGCTTGCAGCTATGGTGTTTGTGATATTGCTTCTTCGAGACTCGGAGGCTGCGATCTCGTGTAGCGATGTTGTCACAGACCTAAGGCCATGCGTGAGCTACCTTGTGAGCGGTAGCGGGAAGCCACCAGCGGCTTGTTGCACCGGTGCAAATGCTCTAGCCTCCGCAGCTACAACCACTGCTGACAAGAAGGCTGCATGCGAATGCATCAAGTCAGCTGCTGGTAGTTTGAATTACAACGCTAAATTGGCACAAGATCTTCCTAGCAATTGTGGCATTAGCCTGCCTTTCACGGTCTCCGCTAGCGTCGACTGTTCCAAGTATGAAAATTTAAGAATCAAAATA

mRNA sequence

CTAGCAGCCATGGCATTAAAGCTTGCAGCTATGGTGTTTGTGATATTGCTTCTTCGAGACTCGGAGGCTGCGATCTCGTGTAGCGATGTTGTCACAGACCTAAGGCCATGCGTGAGCTACCTTGTGAGCGGTAGCGGGAAGCCACCAGCGGCTTGTTGCACCGGTGCAAATGCTCTAGCCTCCGCAGCTACAACCACTGCTGACAAGAAGGCTGCATGCGAATGCATCAAGTCAGCTGCTGGTAGTTTGAATTACAACGCTAAATTGGCACAAGATCTTCCTAGCAATTGTGGCATTAGCCTGCCTTTCACGGTCTCCGCTAGCGTCGACTGTTCCAAGTATGAAAATTTAAGAATCAAAATA

Coding sequence (CDS)

CTAGCAGCCATGGCATTAAAGCTTGCAGCTATGGTGTTTGTGATATTGCTTCTTCGAGACTCGGAGGCTGCGATCTCGTGTAGCGATGTTGTCACAGACCTAAGGCCATGCGTGAGCTACCTTGTGAGCGGTAGCGGGAAGCCACCAGCGGCTTGTTGCACCGGTGCAAATGCTCTAGCCTCCGCAGCTACAACCACTGCTGACAAGAAGGCTGCATGCGAATGCATCAAGTCAGCTGCTGGTAGTTTGAATTACAACGCTAAATTGGCACAAGATCTTCCTAGCAATTGTGGCATTAGCCTGCCTTTCACGGTCTCCGCTAGCGTCGACTGTTCCAAGTATGAAAATTTAAGAATCAAAATA

Protein sequence

LAAMALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSKYENLRIKI

Homology

[Close]

BLAST of MS009352 vs. NCBI nr
Match: XP_022151019.1 (non-specific lipid-transfer protein 8 [Momordica charantia])

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-49
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 4   MALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAA 63
           MALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAA
Sbjct: 1   MALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAA 60

Query: 64  TTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           TTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK
Sbjct: 61  TTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 110

[Close]

BLAST of MS009352 vs. NCBI nr
Match: KAA0058675.1 (non-specific lipid-transfer protein 8 [Cucumis melo var. makuwa] >TYK10482.1 non-specific lipid-transfer protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 2.9e-36
Identity = 82/109 (75.23%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 9   AAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTAD 68
           A ++FV LLL  S+A ISCSDV  DL PCVSYLVSGSGKPP+ACC GA AL+SAAT+ AD
Sbjct: 9   AILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSGAD 68

Query: 69  KKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSKYENL 118
           KKAAC+CIKSAA ++NYNAKLAQDLPSNCGI+LPF++SA +DCSKYE L
Sbjct: 69  KKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKYEYL 117

[Close]

BLAST of MS009352 vs. NCBI nr
Match: XP_038900062.1 (non-specific lipid-transfer protein 8 [Benincasa hispida])

HSP 1 Score: 160.2 bits (404), Expect = 1.1e-35
Identity = 83/110 (75.45%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 7   KLAAM---VFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAA 66
           KL AM   V + L L+DS+AAISC+DV  DL PCVSYLVSGSGKPP+ACC GA AL+SAA
Sbjct: 11  KLEAMLLFVILFLFLQDSKAAISCNDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAA 70

Query: 67  TTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           TT+ADKKAAC+CIKSAA ++NYNAKLAQDLPSNCGISLPF++SA +DCSK
Sbjct: 71  TTSADKKAACQCIKSAASNVNYNAKLAQDLPSNCGISLPFSISAGIDCSK 120

[Close]

BLAST of MS009352 vs. NCBI nr
Match: XP_004135897.1 (non-specific lipid-transfer protein 8 [Cucumis sativus] >KGN45185.1 hypothetical protein Csa_015613 [Cucumis sativus])

HSP 1 Score: 158.7 bits (400), Expect = 3.2e-35
Identity = 79/105 (75.24%), Postives = 93/105 (88.57%), Query Frame = 0


Query: 9   AAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTAD 68
           A ++FV LLL+ S+A ISCSDV  DL PCVSYL+SGSGKPP+ACC GA AL+SAAT++AD
Sbjct: 13  AVLLFVFLLLQVSKATISCSDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSSAATSSAD 72

Query: 69  KKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           KKAACECIKSAA ++NYN KLAQDLPSNCGISLPF++SA +DCSK
Sbjct: 73  KKAACECIKSAASNVNYNVKLAQDLPSNCGISLPFSISAGIDCSK 117

[Close]

BLAST of MS009352 vs. NCBI nr
Match: XP_008461223.1 (PREDICTED: non-specific lipid-transfer protein 8 [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 1.6e-34
Identity = 79/105 (75.24%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 9   AAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTAD 68
           A ++FV LLL  S+A ISCSDV  DL PCVSYLVSGSGKPP+ACC GA AL+SAAT+ AD
Sbjct: 9   AILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSGAD 68

Query: 69  KKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           KKAAC+CIKSAA ++NYNAKLAQDLPSNCGI+LPF++SA +DCSK
Sbjct: 69  KKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSK 113

[Close]

BLAST of MS009352 vs. ExPASy Swiss-Prot
Match: Q9ZPW9 (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana OX=3702 GN=LTP8 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.9e-25
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 6   LKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATT 65
           L + +++ +  + R SE+AISCS V+ DL+PCVSYL SGSG PP  CC G  +LA+A TT
Sbjct: 7   LAIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTT 66

Query: 66  TADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCS 113
           +ADKKAAC+CIKS A S+    +LAQ L SNCG SLP   S +VDC+
Sbjct: 67  SADKKAACQCIKSVANSVTVKPELAQALASNCGASLPVDASPTVDCT 113

[Close]

BLAST of MS009352 vs. ExPASy Swiss-Prot
Match: Q43767 (Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare OX=4513 GN=LTP4.1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.0e-23
Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 2   AAMALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALAS 61
           AA  L L A+V  +LL+  ++AAISC  V + L PC+SY      KPPAACC+G   LA 
Sbjct: 5   AASQLVLVALVAAMLLVA-ADAAISCGQVSSALSPCISYARGNGAKPPAACCSGVKRLAG 64

Query: 62  AATTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           AA +TADK+AAC+CIKSAAG L  NA  A  +PS CG+S+P+ +SASVDCSK
Sbjct: 65  AAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSK 113

[Close]

BLAST of MS009352 vs. ExPASy Swiss-Prot
Match: Q42842 (Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare OX=4513 GN=LTP4.3 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 6.5e-23
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 2   AAMALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALAS 61
           AA  L L AMV  +LL+  ++AAISC  V + L PC+SY      KPP ACC+G   LA 
Sbjct: 5   AATQLVLVAMVAAMLLVA-TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAG 64

Query: 62  AATTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           AA +TADK+AAC+CIKSAAG L  NA  A  +PS CG+S+P+ +SASVDCSK
Sbjct: 65  AAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSK 113

[Close]

BLAST of MS009352 vs. ExPASy Swiss-Prot
Match: Q43875 (Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare OX=4513 GN=LTP4.2 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-22
Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 0


Query: 2   AAMALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALAS 61
           AA  L L AMV  +L++  ++AAISC  V + L PC+SY      KPP ACC+G   LA 
Sbjct: 5   AATQLVLVAMVAAMLIVA-TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAG 64

Query: 62  AATTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           AA +TADK+AAC+CIKSAAG L  NA  A  +PS CG+S+P+ +SASVDCSK
Sbjct: 65  AAQSTADKQAACKCIKSAAGGL--NAGKAAGIPSMCGVSVPYAISASVDCSK 113

[Close]

BLAST of MS009352 vs. ExPASy Swiss-Prot
Match: Q2QYL2 (Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=LTP2-B PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.6e-19
Identity = 57/115 (49.57%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 1   LAAMALKLAAMVFVILLL--RDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANA 60
           +A   L L A+V  +LL     + AAISC  V + + PC+SY   GSG P AACC+G  +
Sbjct: 1   MARAQLVLVALVAALLLAGPHTTMAAISCGQVNSAVSPCLSYARGGSG-PSAACCSGVRS 60

Query: 61  LASAATTTADKKAACECIKSAAGSLN-YNAKLAQDLPSNCGISLPFTVSASVDCS 113
           L SAATTTAD++ AC C+K+ AGS++  NA  A  +PS CG+S+P+T+S S+DCS
Sbjct: 61  LNSAATTTADRRTACNCLKNVAGSISGLNAGNAASIPSKCGVSIPYTISPSIDCS 114

[Close]

BLAST of MS009352 vs. ExPASy TrEMBL
Match: A0A6J1DBS2 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111019036 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.5e-50
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 4   MALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAA 63
           MALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAA
Sbjct: 1   MALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAA 60

Query: 64  TTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           TTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK
Sbjct: 61  TTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 110

[Close]

BLAST of MS009352 vs. ExPASy TrEMBL
Match: A0A5A7UYN6 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001310 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36
Identity = 82/109 (75.23%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 9   AAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTAD 68
           A ++FV LLL  S+A ISCSDV  DL PCVSYLVSGSGKPP+ACC GA AL+SAAT+ AD
Sbjct: 9   AILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSGAD 68

Query: 69  KKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSKYENL 118
           KKAAC+CIKSAA ++NYNAKLAQDLPSNCGI+LPF++SA +DCSKYE L
Sbjct: 69  KKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSKYEYL 117

[Close]

BLAST of MS009352 vs. ExPASy TrEMBL
Match: A0A0A0K657 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430200 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.5e-35
Identity = 79/105 (75.24%), Postives = 93/105 (88.57%), Query Frame = 0


Query: 9   AAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTAD 68
           A ++FV LLL+ S+A ISCSDV  DL PCVSYL+SGSGKPP+ACC GA AL+SAAT++AD
Sbjct: 13  AVLLFVFLLLQVSKATISCSDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSSAATSSAD 72

Query: 69  KKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           KKAACECIKSAA ++NYN KLAQDLPSNCGISLPF++SA +DCSK
Sbjct: 73  KKAACECIKSAASNVNYNVKLAQDLPSNCGISLPFSISAGIDCSK 117

[Close]

BLAST of MS009352 vs. ExPASy TrEMBL
Match: A0A1S3CEM4 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103499873 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.7e-35
Identity = 79/105 (75.24%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 9   AAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTAD 68
           A ++FV LLL  S+A ISCSDV  DL PCVSYLVSGSGKPP+ACC GA AL+SAAT+ AD
Sbjct: 9   AILLFVFLLLGVSKATISCSDVTKDLMPCVSYLVSGSGKPPSACCDGAKALSSAATSGAD 68

Query: 69  KKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           KKAAC+CIKSAA ++NYNAKLAQDLPSNCGI+LPF++SA +DCSK
Sbjct: 69  KKAACQCIKSAASNVNYNAKLAQDLPSNCGITLPFSISAGIDCSK 113

[Close]

BLAST of MS009352 vs. ExPASy TrEMBL
Match: A0A6J1H5K9 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111460693 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33
Identity = 75/109 (68.81%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 5   ALKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAAT 64
           +LK+  +  ++LLL++SEAAISC+DV  DL PCVSYL+SGSGKPP+ACC GA AL+ AAT
Sbjct: 3   SLKVTIVCMMLLLLQESEAAISCNDVTKDLMPCVSYLMSGSGKPPSACCDGAKALSLAAT 62

Query: 65  TTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCSK 114
           ++ DKKAACECIKS AGS+ YNAKLA+DLP NCGI+LPF++SA +DCSK
Sbjct: 63  SSDDKKAACECIKSVAGSVKYNAKLAEDLPGNCGITLPFSISAGIDCSK 111

[Close]

BLAST of MS009352 vs. TAIR 10
Match: AT2G18370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 114.8 bits (286), Expect = 4.9e-26
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 6   LKLAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATT 65
           L + +++ +  + R SE+AISCS V+ DL+PCVSYL SGSG PP  CC G  +LA+A TT
Sbjct: 7   LAIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTT 66

Query: 66  TADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCS 113
           +ADKKAAC+CIKS A S+    +LAQ L SNCG SLP   S +VDC+
Sbjct: 67  SADKKAACQCIKSVANSVTVKPELAQALASNCGASLPVDASPTVDCT 113

[Close]

BLAST of MS009352 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-17
Identity = 47/111 (42.34%), Postives = 63/111 (56.76%), Query Frame = 0


Query: 8   LAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTA 67
           L   V ++L L   EAA+SC+ V+ DL PC+SY+  G G  P  CC G   L S A T+ 
Sbjct: 4   LLLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQG-GPVPTLCCNGLTTLKSQAQTSV 63

Query: 68  DKKAACECIKSAAGSLNYNAKLAQ---DLPSNCGISLPFTVSASVDCSKYE 116
           D++  C CIKSA G L  + +  Q   +LPS CG+ LP+  S S DC   +
Sbjct: 64  DRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113

[Close]

BLAST of MS009352 vs. TAIR 10
Match: AT3G08770.2 (lipid transfer protein 6 )

HSP 1 Score: 85.1 bits (209), Expect = 4.2e-17
Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 8   LAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALASAATTTA 67
           L   V ++L L   EAA+SC+ V+ DL PC+SY+  G G  P  CC G   L S A T+ 
Sbjct: 4   LLLAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQG-GPVPTLCCNGLTTLKSQAQTSV 63

Query: 68  DKKAACECIKSAAGSLNYNAKLAQ---DLPSNCGISLPFTVSASVDC 112
           D++  C CIKSA G L  + +  Q   +LPS CG+ LP+  S S DC
Sbjct: 64  DRQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDC 109

[Close]

BLAST of MS009352 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-15
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 0


Query: 3   AMALK-LAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALAS 62
           A AL+    +V  + ++   +AAISC  V   L PC +YL  G G  P +CC G   L S
Sbjct: 2   AFALRFFTCLVLTVCIVASVDAAISCGTVAGSLAPCATYLSKG-GLVPPSCCAGVKTLNS 61

Query: 63  AATTTADKKAACECIKSAAGSLN-YNAKLAQDLPSNCGISLPFTVSASVDCS 113
            A TT D++ AC CI+S A S++  N  LA  LP  CG+S+P+ +S S +C+
Sbjct: 62  MAKTTPDRQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCN 112

[Close]

BLAST of MS009352 vs. TAIR 10
Match: AT5G59310.1 (lipid transfer protein 4 )

HSP 1 Score: 74.7 bits (182), Expect = 5.7e-14
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 3   AMALK-LAAMVFVILLLRDSEAAISCSDVVTDLRPCVSYLVSGSGKPPAACCTGANALAS 62
           A AL+     V  + ++   +AAI+C  V + L PC+ YL  G   PP  CC G   L  
Sbjct: 2   AFALRFFTCFVLTVFIVASVDAAITCGTVASSLSPCLGYLSKGGVVPP-PCCAGVKKLNG 61

Query: 63  AATTTADKKAACECIKSAAGSLNYNAKLAQDLPSNCGISLPFTVSASVDCS 113
            A TT D++ AC C++SAA  +  N  LA  LP  CG+S+P+ +S S +C+
Sbjct: 62  MAQTTPDRQQACRCLQSAAKGV--NPSLASGLPGKCGVSIPYPISTSTNCA 109

The following BLAST results are available for this feature:

BLAST of MS009352 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151019.1	1.3e-49	100.00	non-specific lipid-transfer protein 8 [Momordica charantia]	[more]
KAA0058675.1	2.9e-36	75.23	non-specific lipid-transfer protein 8 [Cucumis melo var. makuwa] >TYK10482.1 non...	[more]
XP_038900062.1	1.1e-35	75.45	non-specific lipid-transfer protein 8 [Benincasa hispida]	[more]
XP_004135897.1	3.2e-35	75.24	non-specific lipid-transfer protein 8 [Cucumis sativus] >KGN45185.1 hypothetical...	[more]
XP_008461223.1	1.6e-34	75.24	PREDICTED: non-specific lipid-transfer protein 8 [Cucumis melo]	[more]

BLAST of MS009352 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZPW9	6.9e-25	56.07	Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana OX=3702 GN=LTP8 PE...	[more]
Q43767	5.0e-23	56.25	Non-specific lipid-transfer protein 4.1 OS=Hordeum vulgare OX=4513 GN=LTP4.1 PE=...	[more]
Q42842	6.5e-23	56.25	Non-specific lipid-transfer protein 4.3 OS=Hordeum vulgare OX=4513 GN=LTP4.3 PE=...	[more]
Q43875	1.1e-22	55.36	Non-specific lipid-transfer protein 4.2 OS=Hordeum vulgare OX=4513 GN=LTP4.2 PE=...	[more]
Q2QYL2	2.6e-19	49.57	Non-specific lipid-transfer protein 2B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of MS009352 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DBS2	6.5e-50	100.00	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110190...	[more]
A0A5A7UYN6	1.4e-36	75.23	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0K657	1.5e-35	75.24	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_7G430200 P...	[more]
A0A1S3CEM4	7.7e-35	75.24	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103499873 PE=3...	[more]
A0A6J1H5K9	1.1e-33	68.81	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11146069...	[more]

BLAST of MS009352 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18370.1	4.9e-26	56.07	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G08770.1	2.5e-17	42.34	lipid transfer protein 6	[more]
AT3G08770.2	4.2e-17	43.93	lipid transfer protein 6	[more]
AT5G59320.1	3.9e-15	41.07	lipid transfer protein 3	[more]
AT5G59310.1	5.7e-14	38.74	lipid transfer protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 47..61 score: 42.56 coord: 26..42 score: 39.55 coord: 102..113 score: 43.72 coord: 84..101 score: 37.01 coord: 68..83 score: 50.38
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 7..114
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 27..111 e-value: 4.2E-12 score: 56.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 27..109 e-value: 3.3E-8 score: 33.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 24..114 e-value: 1.5E-27 score: 97.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 24..113
None	No IPR available	PANTHER	PTHR33076:SF62	NON-SPECIFIC LIPID-TRANSFER PROTEIN 8	coord: 7..114
None	No IPR available	CDD	cd01960	nsLTP1	coord: 25..112 e-value: 1.46758E-27 score: 95.1093

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009352.1	MS009352.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding