MS009351 (gene) Bitter gourd (TR) v1

Overview


Name	MS009351
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein UPSTREAM OF FLC isoform X1
Location	scaffold813: 519376 .. 522159 (-)
RNA-Seq Expression	MS009351
Synteny	MS009351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCTAATAATAAAGGTGGGGAAATTAGAAGAGTTCATATTCTTTACTTTCTTAGCCGGATGGGACACGTGGAGCAACCTCATCTCATCCGTGTTCATCATCTCGCCGCCGCCGCCACCGCCGTCGCCGGCGTTTTCCTCCGAGGTTCTTACTCATTCTTCTTTCTGATCTTTTGGTATGAAGTGGGTTTCTTCTTTGTTTGAAGAAATGGGCCAATGGTGTCAAATTGGTATTGTTCAAAAAGATGGCTGAATTATAAATTCATAAGTACACTAATTAATTAATTCTATCCATCGGAATAGAAATGTCGTTATTTCTTTAATATTATTGACAAGAAATTTTATTCACACTCAAGTTATCCATAAATGAGTTAACTTGAAAATTTGGAGGAGATCACCTAAGTTTAATCTTTTTCTTCGGGTTAAATGAGTATTGATATGAAATGAGTTTCTTCTTGTTTTAAAGAATGACGAGTTTAGTCGATTAATTTCTCAAAATAGGAAAATAAATAATTAAAAATACTTAATCCACCGACTTAAAAGATTTTGGATTTAATTTAGAGAACAAGAAATCTCACGTTCAAATTTTTATAATCTCTATTATTTTTTGGGTCTCATGTGTTAATTTCTCGAGTTCAGTGGAAGTTTAATATCTCTCATACGGTATGAAACTAATCGGGTTTTGTTTTCTTGGCATGTTTGAAGATGTAAAGAGGTGGCTAGGGGAATTGAGAGGGAAGGAGATGCCAGAAGCCTTCTCATGGTCATACAAAAGGTAAGTAAGTTAAAAAAAAAGGAACTCCATTTGATTTCCACCATTGTTACCCTCTCTCTCTCTTGCAGTAAAAAGTAAAAAGGCACAATTTTTATCTCTTTTTTGAGAACCCAAGTTTGAATTGAATTGTATTGTACTAAGTGAAAGAGAATTAATTGAACTGAGGGTTTGCAGAAAGTACAAAACAGGCTACGTTTGGCAAGACCTGGTGGATGACGATCTCATAACTCCATTTTCTGACAACGAATATGTCCTCCAAGGATCTCAAATAATTCAATTTCCCACTCTATTTCGTAATTTCTCCACTCCCACTCGTGACCCTTTTTTCCATTTTTTTTCTTTTTTCAAAATTAATATCCTAATATTCGTTATATATTGTATTTCTCACAGATAATTCTGGCCTCACTTGTTCCTCCTCTAAGCAGAGGAAAAATTCAGTGTTCAGATCAGATGAATTGGAACCCACTCAAGATTTTCCGGCCAAACTGCAAATGAATGGAGAATCGCCGCCGTGCGATTCGGAGAGATCGACGGTCACAGACGACGGTGATTTCATCAAGGTTGAAGAAGAAACCAAGAATTTTTTGGAGACAGCAAAACAGGGAATGGGAGTAGAAGAAATTGAGGGATTCAACAACCAATATTCTTCGTTATATGAGAAATTGAAGGAGGAGAAATATATAGAGAAAGACAAAATGGAGAAAGAAGGTAACTTTTTTTTTCTAAATATTTTTTTAGCATAGAGAACTTGATCAAATTCATAACTTTTTTATTAGAAATATATATCCGTTATTAATAATCTAGGTTCACTTTGTCCTACTATTAATTAATTAAAAGATGGCTTTTTTTTACTATTTTAATAACGATTTTTTAACTCAAAAGGAGTTTATCTAATTATTTATCCCTCGGTATCTATATTTTTTACTATTATTATTAAATTTTTGACAAGTACTAAAAAATAAGTTTTTTTTTGTAGATGTCAAATTTTTATAGGTGATTAACGTAAATAGAGGTGATTAACGTAATGTAATTAGGAAATTTTTATTATTTCAACTGTGGCATTTCACTTTAAGAGTTTAGACTCATAATATTTTTTTGATTTGTTGATATTTGAATATGCTCAATAATTATTTGTCAACCACTGTTTAAATAATAACCTCCAATTAAGTTGAAATTTTCGACTTTTTTTTTAACACAAGGAAACAAAATACCAATTTTCAACCTCTCTCACTTTAGAAAATTGGTTATGATTGAATAAACTTTATAAACCAAAAAATCAAACCGTAAAGTTACTAAATCCGAACAGGTGGACCCACTGCCACGTCAACAGTTTCATCATCGTCGTCATCATCATCTTCATCTACTCATCCTGCTTTCACGAAGAGCAAGAGCTACTCGAGCGGAGCTTCCCACGTGCTTCGCCAATGGATCACGTGCGGCGCCGTGGATACGAACGACACCGTTTTGATCAAGAACCGATCTGCCGCCAAAGATCCACCGAATCTGCCGGAGAAACCCAAAAACGACGCCGTTATTTGCAGAGACGACGTGTTGGGCGGCTCTGCCCGAGTTCTCCGAAGTTCTTGGGACGGGCAGCTCGATATCCACCGCCACAACAACCAACAAAACTCTCGGTAATATTCTTTAACTTCTAATTCTAGCTTTTTAAATTTTTTTTTTTTTTACTTAATATAACAGTTGCTTGAACTTGACAGATTTTTATTTTAGAATTAATGGAATGTAATAGAGTTTAGTGTTGAATAAAAAATACTAGAATTTGTTTAAGGGGATAAAAGGACAATTTAAGAATAATTGGTAAGTTTTAACAAAGTTGGACGAGATTGAATTTTAATTGGAGATGAATAAGAGTAAAACGATGCGTTTTGGGCGTATTTTGCAGGAAAAGCTTCGATGAATTAAGGAAGAAGAGGCCGAAGGAAAGCGGCGGGAGAAAGGTGGCGGCGGCGACGGCGGCTTTCAAGGCGATGGGCGGACCGAACTGCTCG

mRNA sequence

ATGGAGGCTAATAATAAAGGTGGGGAAATTAGAAGAGTTCATATTCTTTACTTTCTTAGCCGGATGGGACACGTGGAGCAACCTCATCTCATCCGTGTTCATCATCTCGCCGCCGCCGCCACCGCCGTCGCCGGCGTTTTCCTCCGAGATGTAAAGAGGTGGCTAGGGGAATTGAGAGGGAAGGAGATGCCAGAAGCCTTCTCATGGTCATACAAAAGAAAGTACAAAACAGGCTACGTTTGGCAAGACCTGGTGGATGACGATCTCATAACTCCATTTTCTGACAACGAATATGTCCTCCAAGGATCTCAAATAATTCAATTTCCCACTCTATTTCGTAATTTCTCCACTCCCACTCTGTTCAGATCAGATGAATTGGAACCCACTCAAGATTTTCCGGCCAAACTGCAAATGAATGGAGAATCGCCGCCGTGCGATTCGGAGAGATCGACGGTCACAGACGACGGTGATTTCATCAAGGTTGAAGAAGAAACCAAGAATTTTTTGGAGACAGCAAAACAGGGAATGGGAGTAGAAGAAATTGAGGGATTCAACAACCAATATTCTTCGTTATATGAGAAATTGAAGGAGGAGAAATATATAGAGAAAGACAAAATGGAGAAAGAAGGTGGACCCACTGCCACGTCAACAGTTTCATCATCGTCGTCATCATCATCTTCATCTACTCATCCTGCTTTCACGAAGAGCAAGAGCTACTCGAGCGGAGCTTCCCACGTGCTTCGCCAATGGATCACGTGCGGCGCCGTGGATACGAACGACACCGTTTTGATCAAGAACCGATCTGCCGCCAAAGATCCACCGAATCTGCCGGAGAAACCCAAAAACGACGCCGTTATTTGCAGAGACGACGTGTTGGGCGGCTCTGCCCGAGTTCTCCGAAGTTCTTGGGACGGGCAGCTCGATATCCACCGCCACAACAACCAACAAAACTCTCGGAAAAGCTTCGATGAATTAAGGAAGAAGAGGCCGAAGGAAAGCGGCGGGAGAAAGGTGGCGGCGGCGACGGCGGCTTTCAAGGCGATGGGCGGACCGAACTGCTCG

Coding sequence (CDS)

ATGGAGGCTAATAATAAAGGTGGGGAAATTAGAAGAGTTCATATTCTTTACTTTCTTAGCCGGATGGGACACGTGGAGCAACCTCATCTCATCCGTGTTCATCATCTCGCCGCCGCCGCCACCGCCGTCGCCGGCGTTTTCCTCCGAGATGTAAAGAGGTGGCTAGGGGAATTGAGAGGGAAGGAGATGCCAGAAGCCTTCTCATGGTCATACAAAAGAAAGTACAAAACAGGCTACGTTTGGCAAGACCTGGTGGATGACGATCTCATAACTCCATTTTCTGACAACGAATATGTCCTCCAAGGATCTCAAATAATTCAATTTCCCACTCTATTTCGTAATTTCTCCACTCCCACTCTGTTCAGATCAGATGAATTGGAACCCACTCAAGATTTTCCGGCCAAACTGCAAATGAATGGAGAATCGCCGCCGTGCGATTCGGAGAGATCGACGGTCACAGACGACGGTGATTTCATCAAGGTTGAAGAAGAAACCAAGAATTTTTTGGAGACAGCAAAACAGGGAATGGGAGTAGAAGAAATTGAGGGATTCAACAACCAATATTCTTCGTTATATGAGAAATTGAAGGAGGAGAAATATATAGAGAAAGACAAAATGGAGAAAGAAGGTGGACCCACTGCCACGTCAACAGTTTCATCATCGTCGTCATCATCATCTTCATCTACTCATCCTGCTTTCACGAAGAGCAAGAGCTACTCGAGCGGAGCTTCCCACGTGCTTCGCCAATGGATCACGTGCGGCGCCGTGGATACGAACGACACCGTTTTGATCAAGAACCGATCTGCCGCCAAAGATCCACCGAATCTGCCGGAGAAACCCAAAAACGACGCCGTTATTTGCAGAGACGACGTGTTGGGCGGCTCTGCCCGAGTTCTCCGAAGTTCTTGGGACGGGCAGCTCGATATCCACCGCCACAACAACCAACAAAACTCTCGGAAAAGCTTCGATGAATTAAGGAAGAAGAGGCCGAAGGAAAGCGGCGGGAGAAAGGTGGCGGCGGCGACGGCGGCTTTCAAGGCGATGGGCGGACCGAACTGCTCG

Protein sequence

MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDDVLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

Homology

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BLAST of MS009351 vs. NCBI nr
Match: XP_022144961.1 (protein UPSTREAM OF FLC isoform X2 [Momordica charantia])

HSP 1 Score: 659.1 bits (1699), Expect = 2.2e-185
Identity = 341/364 (93.68%), Postives = 346/364 (95.05%), Query Frame = 0


Query: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELR 60
           MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA ATAVAGVFLRDVKRWLGELR
Sbjct: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAATATAVAGVFLRDVKRWLGELR 60

Query: 61  GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP- 120
           GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFP LF N     
Sbjct: 61  GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPXLFHNSGLTC 120

Query: 121 --------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLE 180
                   ++FRSDELEPT+DFPAKLQMNGESP CDSERSTVTDDGD IKVEEETKNFLE
Sbjct: 121 SSSKQRKNSVFRSDELEPTRDFPAKLQMNGESPXCDSERSTVTDDGDSIKVEEETKNFLE 180

Query: 181 TAKQGMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH 240
           TAKQG+GVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH
Sbjct: 181 TAKQGIGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH 240

Query: 241 PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD 300
           PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
Sbjct: 241 PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD 300

Query: 301 VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG 355
           +LGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG
Sbjct: 301 MLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG 360

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BLAST of MS009351 vs. NCBI nr
Match: XP_022144952.1 (protein UPSTREAM OF FLC isoform X1 [Momordica charantia])

HSP 1 Score: 659.1 bits (1699), Expect = 2.2e-185
Identity = 341/364 (93.68%), Postives = 346/364 (95.05%), Query Frame = 0


Query: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELR 60
           MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA ATAVAGVFLRDVKRWLGELR
Sbjct: 11  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAATATAVAGVFLRDVKRWLGELR 70

Query: 61  GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP- 120
           GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFP LF N     
Sbjct: 71  GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPXLFHNSGLTC 130

Query: 121 --------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLE 180
                   ++FRSDELEPT+DFPAKLQMNGESP CDSERSTVTDDGD IKVEEETKNFLE
Sbjct: 131 SSSKQRKNSVFRSDELEPTRDFPAKLQMNGESPXCDSERSTVTDDGDSIKVEEETKNFLE 190

Query: 181 TAKQGMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH 240
           TAKQG+GVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH
Sbjct: 191 TAKQGIGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH 250

Query: 241 PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD 300
           PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
Sbjct: 251 PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD 310

Query: 301 VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG 355
           +LGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG
Sbjct: 311 MLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG 370

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BLAST of MS009351 vs. NCBI nr
Match: XP_038899908.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120087098 [Benincasa hispida])

HSP 1 Score: 448.4 bits (1152), Expect = 5.9e-122
Identity = 268/380 (70.53%), Postives = 289/380 (76.05%), Query Frame = 0


Query: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRG 60
           MEA NKGGEIR+VHI+YFLSRMGHVEQPHLIRVHHL        GV+LRDVKRWLGELRG
Sbjct: 9   MEA-NKGGEIRKVHIIYFLSRMGHVEQPHLIRVHHLTGGG---GGVYLRDVKRWLGELRG 68

Query: 61  KEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTL-----FRNF 120
           K+MPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEYVLQGSQII FP L     F NF
Sbjct: 69  KDMPEAFSWSYKRKYKTGYVWQDLVDDDLITPISDNEYVLQGSQIIXFPLLSFFSFFFNF 128

Query: 121 S----------TPTLFRSDELEPTQDFPAK-LQMN-GESPPCDSERSTVTDDGDFIKVEE 180
           S            +LFR +ELE  +DF +K LQ N  ESPPCDSERSTVTDDGD +KVEE
Sbjct: 129 SXLMFLFFTDTKKSLFR-EELELNEDFQSKFLQKNVEESPPCDSERSTVTDDGDSMKVEE 188

Query: 181 ETKNFLET-AKQGM--GVEEIEGFNNQYSSLYEKL---KEEKYIEKDKMEKEGGPTATST 240
           ET   LET  KQG+   + EIEGF  QYSSLY KL    +EK  EKD MEKEGGPTATST
Sbjct: 189 ETTKNLETPPKQGIEEEIHEIEGFKTQYSSLYAKLVKNSKEKDKEKDLMEKEGGPTATST 248

Query: 241 VSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPN 300
           V+SSS        PAFTKSKSYSSGASHVLRQWITC  GAVDTND VL+KNRS  KDPPN
Sbjct: 249 VTSSS-------QPAFTKSKSYSSGASHVLRQWITCGPGAVDTNDAVLVKNRS-PKDPPN 308

Query: 301 L--PEKPKNDAVICRDDVLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKES 354
              P K KNDAV CRDDVLGGSARV+ +S +G L+I R  + Q SRKSFD+ RKKRPKES
Sbjct: 309 QPPPAKLKNDAVFCRDDVLGGSARVIGNSCEGNLEIRRQYSPQTSRKSFDDSRKKRPKES 368

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BLAST of MS009351 vs. NCBI nr
Match: XP_008461226.1 (PREDICTED: protein UPSTREAM OF FLC isoform X1 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 7.5e-117
Identity = 261/371 (70.35%), Postives = 286/371 (77.09%), Query Frame = 0


Query: 1   MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGEL 60
           MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGEL
Sbjct: 12  MEANNNNRGGEIRKVHIIYFLSRMGHVEQPHLIRVHHLAGAS---GGVYLRDVKRWLGEL 71

Query: 61  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP 120
           RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEYVLQGSQII   TLF   +  
Sbjct: 72  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPISDNEYVLQGSQIIFPSTLFD--TKK 131

Query: 121 TLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQG 180
           +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG
Sbjct: 132 SLFR-EELELSEDFSSKLQQRNAEQSPPYDSERSTVTDDGDSVKVEEETTKNLERNPKQG 191

Query: 181 M----GVEEIEGFNNQY--SSLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSS 240
           +     V+EIEGF  QY  SSLY KL   K+EK  +KD M KEGG TATSTVSSSS    
Sbjct: 192 VVEEEEVDEIEGFKTQYSSSSLYAKLANNKKEKDKDKDLMGKEGGTTATSTVSSSS---- 251

Query: 241 SSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA 300
               PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDA
Sbjct: 252 ---QPAFTKSKSYSSGASHVFRQLITCGTGAVDTNDTVLVKNRS-PKDPP--LEKPKNDA 311

Query: 301 VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATA 355
           V+CRD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT 
Sbjct: 312 VVCRDEVLGGSARVIGSSWDFGNLEIRR----QTSRTSVDDLRKKRPKENGNGKVTAAT- 361

[Close]

BLAST of MS009351 vs. NCBI nr
Match: XP_008461228.1 (PREDICTED: protein UPSTREAM OF FLC isoform X3 [Cucumis melo] >XP_008461229.1 PREDICTED: protein UPSTREAM OF FLC isoform X3 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 7.5e-117
Identity = 261/371 (70.35%), Postives = 286/371 (77.09%), Query Frame = 0


Query: 1   MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGEL 60
           MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGEL
Sbjct: 1   MEANNNNRGGEIRKVHIIYFLSRMGHVEQPHLIRVHHLAGAS---GGVYLRDVKRWLGEL 60

Query: 61  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP 120
           RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEYVLQGSQII   TLF   +  
Sbjct: 61  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPISDNEYVLQGSQIIFPSTLFD--TKK 120

Query: 121 TLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQG 180
           +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG
Sbjct: 121 SLFR-EELELSEDFSSKLQQRNAEQSPPYDSERSTVTDDGDSVKVEEETTKNLERNPKQG 180

Query: 181 M----GVEEIEGFNNQY--SSLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSS 240
           +     V+EIEGF  QY  SSLY KL   K+EK  +KD M KEGG TATSTVSSSS    
Sbjct: 181 VVEEEEVDEIEGFKTQYSSSSLYAKLANNKKEKDKDKDLMGKEGGTTATSTVSSSS---- 240

Query: 241 SSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA 300
               PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDA
Sbjct: 241 ---QPAFTKSKSYSSGASHVFRQLITCGTGAVDTNDTVLVKNRS-PKDPP--LEKPKNDA 300

Query: 301 VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATA 355
           V+CRD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT 
Sbjct: 301 VVCRDEVLGGSARVIGSSWDFGNLEIRR----QTSRTSVDDLRKKRPKENGNGKVTAAT- 350

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BLAST of MS009351 vs. ExPASy Swiss-Prot
Match: Q9SYJ8 (Protein SOSEKI 1 OS=Arabidopsis thaliana OX=3702 GN=SOK1 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.8e-44
Identity = 122/284 (42.96%), Postives = 159/284 (55.99%), Query Frame = 0


Query: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRG 60
           ME+N  GGE+RRV+++YFLSR GHV+ PHL+RVHHL+       GVFLRDVK+WL + RG
Sbjct: 1   MESNGGGGEVRRVNLVYFLSRSGHVDHPHLLRVHHLSR-----NGVFLRDVKKWLADARG 60

Query: 61  KEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQII------QFPTLFRN 120
             MP+AFSWS KR+YK GYVWQDL+DDDLITP SDNEYVL+GS+I+       +P + + 
Sbjct: 61  DAMPDAFSWSCKRRYKNGYVWQDLLDDDLITPISDNEYVLKGSEILLSSPKEDYPNVEKK 120

Query: 121 FSTPTLFRSDELEPTQDFP-AKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAK 180
                    D  E  Q       ++  ESP   S+RST T        EE T N      
Sbjct: 121 AWVTRNGGIDAEEKLQKLKLTSEKIQKESPVFCSQRSTATTS---TVTEESTTN------ 180

Query: 181 QGMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAF 240
                   EGF         K ++ K +   +       +     S   S SS+++  ++
Sbjct: 181 -------EEGF-------VLKKQDPKTVSGQRDGSTENGSGNDVESGRPSVSSTTSSSSY 240

Query: 241 TKSKSYSS-GASHVLRQWITCGAVDTNDTVLI---KNRSAAKDP 274
            K+KSYSS  ASHVLR  + CG +DTND VL+   K+RS A  P
Sbjct: 241 IKNKSYSSVRASHVLRNLMKCGGLDTNDAVLVPLNKSRSGAFGP 256

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BLAST of MS009351 vs. ExPASy Swiss-Prot
Match: Q8GY65 (Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 3.7e-18
Identity = 57/155 (36.77%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 4   NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEM 63
           ++K    R V ++Y+LSR G ++ PH I V       ++  G++L+DV   L +LRG  M
Sbjct: 11  DSKPSRERIVPVVYYLSRNGRLDHPHFIEV-----PLSSHNGLYLKDVINRLNDLRGNGM 70

Query: 64  PEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTPTLFRS 123
              +SWS KR YK G+VW DL D+D I P    EYVL+GSQI+       NFS  T  R+
Sbjct: 71  ACLYSWSSKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDLDNNSGNFSAVTHRRN 130

Query: 124 DELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD 156
                   +      ++N E+      + ST TDD
Sbjct: 131 QSWSSVDHYKVYKASELNAEATRKLSMDASTQTDD 160

[Close]

BLAST of MS009351 vs. ExPASy Swiss-Prot
Match: Q8GYT8 (Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.1e-17
Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 9   EIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFS 68
           +I++V I+Y+LS+   +E PH + V       ++  G++LRDV   L  LRG+ M   +S
Sbjct: 30  KIKKVQIVYYLSKNRQLEHPHFMEV-----LISSPNGLYLRDVIERLNVLRGRGMASMYS 89

Query: 69  WSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQI 106
           WS KR Y+ G+VW DL +DDLI P + NEYVL+GS++
Sbjct: 90  WSSKRSYRNGFVWHDLSEDDLILPANGNEYVLKGSEL 121

[Close]

BLAST of MS009351 vs. ExPASy Swiss-Prot
Match: A0A2R6X6S3 (Protein SOSEKI OS=Marchantia polymorpha OX=3197 GN=SOK PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-16
Identity = 92/344 (26.74%), Postives = 166/344 (48.26%), Query Frame = 0


Query: 12  RVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSY 71
           +V ++Y+LSR G ++QPHLI V      +T   G++LRDVKR L  +RGK M ++FSWS 
Sbjct: 16  KVQVVYYLSRGGQLQQPHLIDV----PVSTHSNGLYLRDVKRRLTSIRGKGMGDSFSWSC 75

Query: 72  KRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTPTLFRSDELEP--T 131
           KR YK  ++WQDL DDD I P SD E VL+GS+      L+  F     F   + +P   
Sbjct: 76  KRNYKNNFIWQDLADDDKILPLSDGELVLKGSE------LYTGFQEKAEFMDGQFDPENA 135

Query: 132 QDFPAKL-QMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQY 191
              P K+ ++  +    ++ + ++  + D ++ + +    L  + Q M    ++ F+   
Sbjct: 136 SQLPNKIKKLASKKFDFEAVKRSLDMESDKLQEQSDLAAALSLSLQLMSDPHMKRFSKDK 195

Query: 192 S-SLYEKLKEEKYIEKDKMEKEGG-PTATSTVSSSSSSSSSSTHPAFT-------KSKSY 251
           S  L +++       K    +E     + + +SS +  S  ST   F+       +SKS 
Sbjct: 196 SMDLNQQVMNSLSQAKSNAAEECMLDHSVTDISSETLHSEESTVQKFSFNETIRERSKST 255

Query: 252 SSGASHVLRQWITCGAVDTNDTV---------LIKNRSAAKD-PPNLP-EKPKNDAVICR 311
           +S +S    +  + G     +++         L ++R  +++ PP +P E P+  +    
Sbjct: 256 ASASSSGTDREHSYGPPRKTESMGRERSLPRDLPRSREVSRELPPQVPREAPREKSREMS 315

Query: 312 DDVLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKE 333
            ++   + R L+   +   ++ R   ++ SR    EL ++ P+E
Sbjct: 316 RELPREAPRELQLPREAPRELPREVPRETSR----ELPREAPRE 345

[Close]

BLAST of MS009351 vs. ExPASy Swiss-Prot
Match: Q9FJF5 (Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.2e-13
Identity = 79/287 (27.53%), Postives = 127/287 (44.25%), Query Frame = 0


Query: 11  RRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWS 70
           R+V ++Y+L R G ++ PH I V       ++  G++L+DV   L +LRGK M   +SWS
Sbjct: 45  RKVPVVYYLCRNGQLDHPHFIEV-----TLSSHDGLYLKDVINRLNDLRGKGMASLYSWS 104

Query: 71  YKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLF--RNFSTPTLFRSD-ELE 130
            KR YK G+VW DL +DD I P    EYVL+GS+++    +   R+    + FR    L 
Sbjct: 105 SKRSYKNGFVWHDLSEDDFIFPVQGQEYVLKGSEVLDSCLISNPRSLLETSSFRDPRSLN 164

Query: 131 PTQ----DFPAKLQMNGESPPCDSERS---------TVTDDGDFIKVEEETKNFLETAKQ 190
           P +    D PA +           + S         +  +    +  +  T+      ++
Sbjct: 165 PDKNSGDDIPAVINRRRNQSWSSIDLSEYKVYKATESSAESTQRLAADASTQTDDRRRRR 224

Query: 191 GMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSS---------SSSSS 250
               EEIE   +  S  YE    E  + +D++      ++  T+ +            S 
Sbjct: 225 RPAKEEIEEVKSPAS--YENQSTE--LSRDEISPPPSDSSPETLENLIKADGRLILRPSE 284

Query: 251 SSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTND--TVLIKNRSAA 271
           SS+ H       S    AS VL Q I+CG +   +   VL+K++  A
Sbjct: 285 SSTDHRTVESLSSGRMRASAVLMQLISCGTMSFKECGPVLLKDQGLA 322

[Close]

BLAST of MS009351 vs. ExPASy TrEMBL
Match: A0A6J1CV58 (protein UPSTREAM OF FLC isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014499 PE=3 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.1e-185
Identity = 341/364 (93.68%), Postives = 346/364 (95.05%), Query Frame = 0


Query: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELR 60
           MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA ATAVAGVFLRDVKRWLGELR
Sbjct: 11  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAATATAVAGVFLRDVKRWLGELR 70

Query: 61  GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP- 120
           GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFP LF N     
Sbjct: 71  GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPXLFHNSGLTC 130

Query: 121 --------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLE 180
                   ++FRSDELEPT+DFPAKLQMNGESP CDSERSTVTDDGD IKVEEETKNFLE
Sbjct: 131 SSSKQRKNSVFRSDELEPTRDFPAKLQMNGESPXCDSERSTVTDDGDSIKVEEETKNFLE 190

Query: 181 TAKQGMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH 240
           TAKQG+GVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH
Sbjct: 191 TAKQGIGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH 250

Query: 241 PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD 300
           PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
Sbjct: 251 PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD 310

Query: 301 VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG 355
           +LGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG
Sbjct: 311 MLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG 370

[Close]

BLAST of MS009351 vs. ExPASy TrEMBL
Match: A0A6J1CUY7 (protein UPSTREAM OF FLC isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014499 PE=3 SV=1)

HSP 1 Score: 659.1 bits (1699), Expect = 1.1e-185
Identity = 341/364 (93.68%), Postives = 346/364 (95.05%), Query Frame = 0


Query: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELR 60
           MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA ATAVAGVFLRDVKRWLGELR
Sbjct: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAATATAVAGVFLRDVKRWLGELR 60

Query: 61  GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP- 120
           GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFP LF N     
Sbjct: 61  GKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPXLFHNSGLTC 120

Query: 121 --------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLE 180
                   ++FRSDELEPT+DFPAKLQMNGESP CDSERSTVTDDGD IKVEEETKNFLE
Sbjct: 121 SSSKQRKNSVFRSDELEPTRDFPAKLQMNGESPXCDSERSTVTDDGDSIKVEEETKNFLE 180

Query: 181 TAKQGMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH 240
           TAKQG+GVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH
Sbjct: 181 TAKQGIGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTH 240

Query: 241 PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD 300
           PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
Sbjct: 241 PAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD 300

Query: 301 VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG 355
           +LGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG
Sbjct: 301 MLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGG 360

[Close]

BLAST of MS009351 vs. ExPASy TrEMBL
Match: A0A1S3CEM9 (protein UPSTREAM OF FLC isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.6e-117
Identity = 261/371 (70.35%), Postives = 286/371 (77.09%), Query Frame = 0


Query: 1   MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGEL 60
           MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGEL
Sbjct: 1   MEANNNNRGGEIRKVHIIYFLSRMGHVEQPHLIRVHHLAGAS---GGVYLRDVKRWLGEL 60

Query: 61  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP 120
           RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEYVLQGSQII   TLF   +  
Sbjct: 61  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPISDNEYVLQGSQIIFPSTLFD--TKK 120

Query: 121 TLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQG 180
           +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG
Sbjct: 121 SLFR-EELELSEDFSSKLQQRNAEQSPPYDSERSTVTDDGDSVKVEEETTKNLERNPKQG 180

Query: 181 M----GVEEIEGFNNQY--SSLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSS 240
           +     V+EIEGF  QY  SSLY KL   K+EK  +KD M KEGG TATSTVSSSS    
Sbjct: 181 VVEEEEVDEIEGFKTQYSSSSLYAKLANNKKEKDKDKDLMGKEGGTTATSTVSSSS---- 240

Query: 241 SSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA 300
               PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDA
Sbjct: 241 ---QPAFTKSKSYSSGASHVFRQLITCGTGAVDTNDTVLVKNRS-PKDPP--LEKPKNDA 300

Query: 301 VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATA 355
           V+CRD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT 
Sbjct: 301 VVCRDEVLGGSARVIGSSWDFGNLEIRR----QTSRTSVDDLRKKRPKENGNGKVTAAT- 350

[Close]

BLAST of MS009351 vs. ExPASy TrEMBL
Match: A0A1S3CE79 (protein UPSTREAM OF FLC isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.6e-117
Identity = 261/371 (70.35%), Postives = 286/371 (77.09%), Query Frame = 0


Query: 1   MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGEL 60
           MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGEL
Sbjct: 12  MEANNNNRGGEIRKVHIIYFLSRMGHVEQPHLIRVHHLAGAS---GGVYLRDVKRWLGEL 71

Query: 61  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP 120
           RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEYVLQGSQII   TLF   +  
Sbjct: 72  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPISDNEYVLQGSQIIFPSTLFD--TKK 131

Query: 121 TLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQG 180
           +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG
Sbjct: 132 SLFR-EELELSEDFSSKLQQRNAEQSPPYDSERSTVTDDGDSVKVEEETTKNLERNPKQG 191

Query: 181 M----GVEEIEGFNNQY--SSLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSS 240
           +     V+EIEGF  QY  SSLY KL   K+EK  +KD M KEGG TATSTVSSSS    
Sbjct: 192 VVEEEEVDEIEGFKTQYSSSSLYAKLANNKKEKDKDKDLMGKEGGTTATSTVSSSS---- 251

Query: 241 SSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA 300
               PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDA
Sbjct: 252 ---QPAFTKSKSYSSGASHVFRQLITCGTGAVDTNDTVLVKNRS-PKDPP--LEKPKNDA 311

Query: 301 VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATA 355
           V+CRD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT 
Sbjct: 312 VVCRDEVLGGSARVIGSSWDFGNLEIRR----QTSRTSVDDLRKKRPKENGNGKVTAAT- 361

[Close]

BLAST of MS009351 vs. ExPASy TrEMBL
Match: A0A1S3CE85 (uncharacterized protein LOC103499876 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.4e-113
Identity = 256/368 (69.57%), Postives = 280/368 (76.09%), Query Frame = 0


Query: 1   MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGEL 60
           MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGEL
Sbjct: 12  MEANNNNRGGEIRKVHIIYFLSRMGHVEQPHLIRVHHLAGAS---GGVYLRDVKRWLGEL 71

Query: 61  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTP 120
           RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEYVLQGSQII   TLF   +  
Sbjct: 72  RGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPISDNEYVLQGSQIIFPSTLFD--TKK 131

Query: 121 TLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQG 180
           +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG
Sbjct: 132 SLFR-EELELSEDFSSKLQQRNAEQSPPYDSERSTVTDDGDSVKVEEETTKNLERNPKQG 191

Query: 181 M----GVEEIEGFNNQY--SSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSST 240
           +     V+EIEGF  QY  SSLY KL   K  EKDK +   G  ATSTVSSSS       
Sbjct: 192 VVEEEEVDEIEGFKTQYSSSSLYAKLANNKK-EKDKDKDLMGKEATSTVSSSS------- 251

Query: 241 HPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVIC 300
            PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDAV+C
Sbjct: 252 QPAFTKSKSYSSGASHVFRQLITCGTGAVDTNDTVLVKNRS-PKDPP--LEKPKNDAVVC 311

Query: 301 RDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFK 355
           RD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT  +K
Sbjct: 312 RDEVLGGSARVIGSSWDFGNLEIRR----QTSRTSVDDLRKKRPKENGNGKVTAAT-TYK 357

[Close]

BLAST of MS009351 vs. TAIR 10
Match: AT1G05577.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 179.1 bits (453), Expect = 6.2e-45
Identity = 122/284 (42.96%), Postives = 159/284 (55.99%), Query Frame = 0


Query: 1   MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRG 60
           ME+N  GGE+RRV+++YFLSR GHV+ PHL+RVHHL+       GVFLRDVK+WL + RG
Sbjct: 1   MESNGGGGEVRRVNLVYFLSRSGHVDHPHLLRVHHLSR-----NGVFLRDVKKWLADARG 60

Query: 61  KEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQII------QFPTLFRN 120
             MP+AFSWS KR+YK GYVWQDL+DDDLITP SDNEYVL+GS+I+       +P + + 
Sbjct: 61  DAMPDAFSWSCKRRYKNGYVWQDLLDDDLITPISDNEYVLKGSEILLSSPKEDYPNVEKK 120

Query: 121 FSTPTLFRSDELEPTQDFP-AKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAK 180
                    D  E  Q       ++  ESP   S+RST T        EE T N      
Sbjct: 121 AWVTRNGGIDAEEKLQKLKLTSEKIQKESPVFCSQRSTATTS---TVTEESTTN------ 180

Query: 181 QGMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAF 240
                   EGF         K ++ K +   +       +     S   S SS+++  ++
Sbjct: 181 -------EEGF-------VLKKQDPKTVSGQRDGSTENGSGNDVESGRPSVSSTTSSSSY 240

Query: 241 TKSKSYSS-GASHVLRQWITCGAVDTNDTVLI---KNRSAAKDP 274
            K+KSYSS  ASHVLR  + CG +DTND VL+   K+RS A  P
Sbjct: 241 IKNKSYSSVRASHVLRNLMKCGGLDTNDAVLVPLNKSRSGAFGP 256

[Close]

BLAST of MS009351 vs. TAIR 10
Match: AT3G46110.2 (Domain of unknown function (DUF966) )

HSP 1 Score: 94.0 bits (232), Expect = 2.6e-19
Identity = 57/155 (36.77%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 4   NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEM 63
           ++K    R V ++Y+LSR G ++ PH I V       ++  G++L+DV   L +LRG  M
Sbjct: 11  DSKPSRERIVPVVYYLSRNGRLDHPHFIEV-----PLSSHNGLYLKDVINRLNDLRGNGM 70

Query: 64  PEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTPTLFRS 123
              +SWS KR YK G+VW DL D+D I P    EYVL+GSQI+       NFS  T  R+
Sbjct: 71  ACLYSWSSKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDLDNNSGNFSAVTHRRN 130

Query: 124 DELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD 156
                   +      ++N E+      + ST TDD
Sbjct: 131 QSWSSVDHYKVYKASELNAEATRKLSMDASTQTDD 160

[Close]

BLAST of MS009351 vs. TAIR 10
Match: AT3G46110.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 94.0 bits (232), Expect = 2.6e-19
Identity = 57/155 (36.77%), Postives = 81/155 (52.26%), Query Frame = 0


Query: 4   NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEM 63
           ++K    R V ++Y+LSR G ++ PH I V       ++  G++L+DV   L +LRG  M
Sbjct: 11  DSKPSRERIVPVVYYLSRNGRLDHPHFIEV-----PLSSHNGLYLKDVINRLNDLRGNGM 70

Query: 64  PEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLFRNFSTPTLFRS 123
              +SWS KR YK G+VW DL D+D I P    EYVL+GSQI+       NFS  T  R+
Sbjct: 71  ACLYSWSSKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDLDNNSGNFSAVTHRRN 130

Query: 124 DELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD 156
                   +      ++N E+      + ST TDD
Sbjct: 131 QSWSSVDHYKVYKASELNAEATRKLSMDASTQTDD 160

[Close]

BLAST of MS009351 vs. TAIR 10
Match: AT2G28150.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 90.9 bits (224), Expect = 2.2e-18
Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 9   EIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFS 68
           +I++V I+Y+LS+   +E PH + V       ++  G++LRDV   L  LRG+ M   +S
Sbjct: 30  KIKKVQIVYYLSKNRQLEHPHFMEV-----LISSPNGLYLRDVIERLNVLRGRGMASMYS 89

Query: 69  WSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQI 106
           WS KR Y+ G+VW DL +DDLI P + NEYVL+GS++
Sbjct: 90  WSSKRSYRNGFVWHDLSEDDLILPANGNEYVLKGSEL 121

[Close]

BLAST of MS009351 vs. TAIR 10
Match: AT5G59790.1 (Domain of unknown function (DUF966) )

HSP 1 Score: 79.0 bits (193), Expect = 8.8e-15
Identity = 79/287 (27.53%), Postives = 127/287 (44.25%), Query Frame = 0


Query: 11  RRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWS 70
           R+V ++Y+L R G ++ PH I V       ++  G++L+DV   L +LRGK M   +SWS
Sbjct: 45  RKVPVVYYLCRNGQLDHPHFIEV-----TLSSHDGLYLKDVINRLNDLRGKGMASLYSWS 104

Query: 71  YKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTLF--RNFSTPTLFRSD-ELE 130
            KR YK G+VW DL +DD I P    EYVL+GS+++    +   R+    + FR    L 
Sbjct: 105 SKRSYKNGFVWHDLSEDDFIFPVQGQEYVLKGSEVLDSCLISNPRSLLETSSFRDPRSLN 164

Query: 131 PTQ----DFPAKLQMNGESPPCDSERS---------TVTDDGDFIKVEEETKNFLETAKQ 190
           P +    D PA +           + S         +  +    +  +  T+      ++
Sbjct: 165 PDKNSGDDIPAVINRRRNQSWSSIDLSEYKVYKATESSAESTQRLAADASTQTDDRRRRR 224

Query: 191 GMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSS---------SSSSS 250
               EEIE   +  S  YE    E  + +D++      ++  T+ +            S 
Sbjct: 225 RPAKEEIEEVKSPAS--YENQSTE--LSRDEISPPPSDSSPETLENLIKADGRLILRPSE 284

Query: 251 SSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTND--TVLIKNRSAA 271
           SS+ H       S    AS VL Q I+CG +   +   VL+K++  A
Sbjct: 285 SSTDHRTVESLSSGRMRASAVLMQLISCGTMSFKECGPVLLKDQGLA 322

The following BLAST results are available for this feature:

BLAST of MS009351 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144961.1	2.2e-185	93.68	protein UPSTREAM OF FLC isoform X2 [Momordica charantia]	[more]
XP_022144952.1	2.2e-185	93.68	protein UPSTREAM OF FLC isoform X1 [Momordica charantia]	[more]
XP_038899908.1	5.9e-122	70.53	LOW QUALITY PROTEIN: uncharacterized protein LOC120087098 [Benincasa hispida]	[more]
XP_008461226.1	7.5e-117	70.35	PREDICTED: protein UPSTREAM OF FLC isoform X1 [Cucumis melo]	[more]
XP_008461228.1	7.5e-117	70.35	PREDICTED: protein UPSTREAM OF FLC isoform X3 [Cucumis melo] >XP_008461229.1 PRE...	[more]

BLAST of MS009351 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYJ8	8.8e-44	42.96	Protein SOSEKI 1 OS=Arabidopsis thaliana OX=3702 GN=SOK1 PE=1 SV=1	[more]
Q8GY65	3.7e-18	36.77	Protein SOSEKI 4 OS=Arabidopsis thaliana OX=3702 GN=SOK4 PE=1 SV=1	[more]
Q8GYT8	3.1e-17	44.33	Protein SOSEKI 3 OS=Arabidopsis thaliana OX=3702 GN=SOK3 PE=1 SV=1	[more]
A0A2R6X6S3	2.0e-16	26.74	Protein SOSEKI OS=Marchantia polymorpha OX=3197 GN=SOK PE=1 SV=1	[more]
Q9FJF5	1.2e-13	27.53	Protein SOSEKI 5 OS=Arabidopsis thaliana OX=3702 GN=SOK5 PE=1 SV=1	[more]

BLAST of MS009351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CV58	1.1e-185	93.68	protein UPSTREAM OF FLC isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101449...	[more]
A0A6J1CUY7	1.1e-185	93.68	protein UPSTREAM OF FLC isoform X2 OS=Momordica charantia OX=3673 GN=LOC11101449...	[more]
A0A1S3CEM9	3.6e-117	70.35	protein UPSTREAM OF FLC isoform X3 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 ...	[more]
A0A1S3CE79	3.6e-117	70.35	protein UPSTREAM OF FLC isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499876 PE=3 ...	[more]
A0A1S3CE85	1.4e-113	69.57	uncharacterized protein LOC103499876 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MS009351 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05577.1	6.2e-45	42.96	Domain of unknown function (DUF966)	[more]
AT3G46110.2	2.6e-19	36.77	Domain of unknown function (DUF966)	[more]
AT3G46110.1	2.6e-19	36.77	Domain of unknown function (DUF966)	[more]
AT2G28150.1	2.2e-18	44.33	Domain of unknown function (DUF966)	[more]
AT5G59790.1	8.8e-15	27.53	Domain of unknown function (DUF966)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010369	Protein SOSEKI	PFAM	PF06136	DUF966	coord: 13..224 e-value: 8.6E-36 score: 124.5
IPR010369	Protein SOSEKI	PANTHER	PTHR31083	UPSTREAM OF FLC PROTEIN (DUF966)	coord: 3..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..238
None	No IPR available	PANTHER	PTHR31083:SF5	F3F20.2 PROTEIN	coord: 3..353

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009351.1	MS009351.1	mRNA