MS009151 (gene) Bitter gourd (TR) v1

Overview


Name	MS009151
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein GL2-INTERACTING REPRESSOR 2
Location	scaffold220: 268144 .. 268974 (+)
RNA-Seq Expression	MS009151
Synteny	MS009151

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAATACCTCAGGAAACCACTAAATATCTGGTGCATGCTACTGGTGACACAGAAAGCCTTGTTCATAGCCTCGAGGAGTTCTACTCAAGCGTGGATCAACTCAATCAAGACTTTGACAAATCTCTCATTCTTAAAAGTTTGTTGGCTTATTCGTCCCCAGTTGAATTAATCGAGAGTTCGAATCTGACCATGAAGCAGTCAGGAGTTCCTGATAAGGTATAATTCTTCTCCAACTTGTAAAGATCATAATCTGTGTTTTAGATTTTTTCCCTAAATGATTTTGGTAGTCTTGTTTTGATCTTTATTTTTTTTCCCTTTCCAAGAAGATTAGGATCTCTTTCCTTTCCCCACATAAATTTTTTAGCCTATTAAGGAAAAATCTAGACATGATCTAGGCATATTTGGGTGAATGCTAATATGTTTCTTATTTCTTGTGGGGTGTGGGGTGGTTCTTGGAAGAAATTCCAAAAGAAGGAAACTAAAAGAAGGTATGCTGTGGAAATGGGAATGACTCCTAATGAAAACGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGCTCTACTTAAGAGGTAAATCGTCTGATGAATCGAAATCTTCATCCCCAAGATCTCAAGACTCGTGCGTGTCTGCGGAGGTCGAGTCAATTGCCAACTTGGAGAATAACCTTCGAGTCGAAGGTTCATCGTTGATTGCAATGGGATGTACTTTTTGCCTGATTTACGTGATGGTTACGGATGCAGATCCCAGATGCCCTAAATGCAAAAATCCTGGCTTGCTGGACATTTTCCGTGGAAATCAGGCAAAGAGATCTAGAAAGAAC

mRNA sequence

ATGGCTTCAATACCTCAGGAAACCACTAAATATCTGGTGCATGCTACTGGTGACACAGAAAGCCTTGTTCATAGCCTCGAGGAGTTCTACTCAAGCGTGGATCAACTCAATCAAGACTTTGACAAATCTCTCATTCTTAAAAGTTTGTTGGCTTATTCGTCCCCAGTTGAATTAATCGAGAGTTCGAATCTGACCATGAAGCAGTCAGGAGTTCCTGATAAGAAGGAAACTAAAAGAAGGTATGCTGTGGAAATGGGAATGACTCCTAATGAAAACGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGCTCTACTTAAGAGGTAAATCGTCTGATGAATCGAAATCTTCATCCCCAAGATCTCAAGACTCGTGCGTGTCTGCGGAGGTCGAGTCAATTGCCAACTTGGAGAATAACCTTCGAGTCGAAGGTTCATCGTTGATTGCAATGGGATGTACTTTTTGCCTGATTTACGTGATGGTTACGGATGCAGATCCCAGATGCCCTAAATGCAAAAATCCTGGCTTGCTGGACATTTTCCGTGGAAATCAGGCAAAGAGATCTAGAAAGAAC

Coding sequence (CDS)

ATGGCTTCAATACCTCAGGAAACCACTAAATATCTGGTGCATGCTACTGGTGACACAGAAAGCCTTGTTCATAGCCTCGAGGAGTTCTACTCAAGCGTGGATCAACTCAATCAAGACTTTGACAAATCTCTCATTCTTAAAAGTTTGTTGGCTTATTCGTCCCCAGTTGAATTAATCGAGAGTTCGAATCTGACCATGAAGCAGTCAGGAGTTCCTGATAAGAAGGAAACTAAAAGAAGGTATGCTGTGGAAATGGGAATGACTCCTAATGAAAACGATGCATATTTGGATCTCAAACTGTCACCTCCAGGGCTCTACTTAAGAGGTAAATCGTCTGATGAATCGAAATCTTCATCCCCAAGATCTCAAGACTCGTGCGTGTCTGCGGAGGTCGAGTCAATTGCCAACTTGGAGAATAACCTTCGAGTCGAAGGTTCATCGTTGATTGCAATGGGATGTACTTTTTGCCTGATTTACGTGATGGTTACGGATGCAGATCCCAGATGCCCTAAATGCAAAAATCCTGGCTTGCTGGACATTTTCCGTGGAAATCAGGCAAAGAGATCTAGAAAGAAC

Protein sequence

MASIPQETTKYLVHATGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVELIESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESKSSSPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPGLLDIFRGNQAKRSRKN

Homology

[Close]

BLAST of MS009151 vs. NCBI nr
Match: XP_022134284.1 (uncharacterized protein LOC111006584 [Momordica charantia])

HSP 1 Score: 367.9 bits (943), Expect = 5.5e-98
Identity = 191/196 (97.45%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MASIPQETTKYLVHATGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVELIE 60
           MASIPQETTKYLVHATGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVELIE
Sbjct: 1   MASIPQETTKYLVHATGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVELIE 60

Query: 61  SSNLTMKQSGVPD----KKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESK 120
           SSNLTMKQSGVPD    KKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESK
Sbjct: 61  SSNLTMKQSGVPDKKFQKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESK 120

Query: 121 SSSPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPG 180
           SSSPRSQDSCVSAEVESIAN ENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPG
Sbjct: 121 SSSPRSQDSCVSAEVESIANSENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPG 180

Query: 181 LLDIFRGNQAKRSRKN 193
           LLDIFRGNQAKRSRKN
Sbjct: 181 LLDIFRGNQAKRSRKN 196

[Close]

BLAST of MS009151 vs. NCBI nr
Match: XP_038885898.1 (uncharacterized protein LOC120076204 [Benincasa hispida])

HSP 1 Score: 268.1 bits (684), Expect = 5.9e-68
Identity = 145/194 (74.74%), Postives = 157/194 (80.93%), Query Frame = 0


Query: 7   ETTKYLVHA-------TGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVELI 66
           ETT+YL HA         D ES   S E+F  SVDQLNQDF+KSL+LK+    SS +EL 
Sbjct: 84  ETTQYLEHAGDAKDCGGDDLESCARSPEDFSLSVDQLNQDFNKSLVLKN----SSSIELK 143

Query: 67  ESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESKSSS 126
           +SSNLTMKQS VPDKKETKRRYAVEMG   NENDAYLDLKLSPPG+Y RGK S+ESKSSS
Sbjct: 144 DSSNLTMKQSEVPDKKETKRRYAVEMGTAANENDAYLDLKLSPPGVYSRGKLSNESKSSS 203

Query: 127 PRSQDSCVSAEVESIANLE-NNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPGLL 186
           PRSQDSC+SAEVES  N E NNLRVE S LI MGCTFCL+YVMVTDADPRCPKCKNPGLL
Sbjct: 204 PRSQDSCISAEVESNVNSENNNLRVESSPLIVMGCTFCLLYVMVTDADPRCPKCKNPGLL 263

Query: 187 DIFRGNQAKRSRKN 193
           D+FRGNQ KRSRKN
Sbjct: 264 DVFRGNQVKRSRKN 273

[Close]

BLAST of MS009151 vs. NCBI nr
Match: KAG6578827.1 (hypothetical protein SDJN03_23275, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267.3 bits (682), Expect = 1.0e-67
Identity = 147/200 (73.50%), Postives = 161/200 (80.50%), Query Frame = 0


Query: 1   MASIPQETTKYLVHA--------TGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAY 60
           M S PQETT+YL  +         GD ESL  S EEF SSVDQLNQ+F+KSL+LKS  + 
Sbjct: 1   MGSKPQETTQYLESSGDAKDCAGGGDLESLC-SPEEFSSSVDQLNQNFNKSLVLKSSSSR 60

Query: 61  SSPVELIESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSS 120
           SSP+E+ +SS L+MKQS V DKKETKRRYA  MG T NEN AYLDLKLSPPG+YLRGKSS
Sbjct: 61  SSPIEVKDSSKLSMKQSEVTDKKETKRRYAPGMGTTGNENYAYLDLKLSPPGVYLRGKSS 120

Query: 121 DESKSSSPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKC 180
           +ESKSSSP+SQDSCVSAEVES  NLENNL VEGS LI MGCTFCL+YVMVTD DPRCP C
Sbjct: 121 NESKSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPIC 180

Query: 181 KNPGLLDIFRGNQAKRSRKN 193
           KN GLLDIFRGNQ KRSRKN
Sbjct: 181 KNSGLLDIFRGNQPKRSRKN 199

[Close]

BLAST of MS009151 vs. NCBI nr
Match: XP_022939372.1 (uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata] >XP_022939373.1 uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-66
Identity = 144/199 (72.36%), Postives = 160/199 (80.40%), Query Frame = 0


Query: 2   ASIPQETTKYLVHA--------TGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYS 61
           + + QETT+YL  +         GD ESL  S EEF SSVDQLNQ+F+KSL+LKS  + S
Sbjct: 48  SQVEQETTQYLESSGDAKDCAGGGDLESLC-SPEEFSSSVDQLNQNFNKSLVLKSSSSRS 107

Query: 62  SPVELIESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSD 121
           SP+E+ +SS L+MKQS V DKKETKRRYA  MG T NEN AYLDLKLSPPG+YLRGKSS+
Sbjct: 108 SPIEVKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSN 167

Query: 122 ESKSSSPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCK 181
           ESKSSSP+SQDSCVSAEVES  NLENNL VEGS LI MGCTFCL+YVMVTD DPRCP CK
Sbjct: 168 ESKSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICK 227

Query: 182 NPGLLDIFRGNQAKRSRKN 193
           N GLLDIFRGNQ KRSRKN
Sbjct: 228 NSGLLDIFRGNQPKRSRKN 245

[Close]

BLAST of MS009151 vs. NCBI nr
Match: XP_022939374.1 (uncharacterized protein LOC111445310 isoform X2 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-66
Identity = 144/199 (72.36%), Postives = 160/199 (80.40%), Query Frame = 0


Query: 2   ASIPQETTKYLVHA--------TGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYS 61
           + + QETT+YL  +         GD ESL  S EEF SSVDQLNQ+F+KSL+LKS  + S
Sbjct: 41  SQVEQETTQYLESSGDAKDCAGGGDLESLC-SPEEFSSSVDQLNQNFNKSLVLKSSSSRS 100

Query: 62  SPVELIESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSD 121
           SP+E+ +SS L+MKQS V DKKETKRRYA  MG T NEN AYLDLKLSPPG+YLRGKSS+
Sbjct: 101 SPIEVKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSN 160

Query: 122 ESKSSSPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCK 181
           ESKSSSP+SQDSCVSAEVES  NLENNL VEGS LI MGCTFCL+YVMVTD DPRCP CK
Sbjct: 161 ESKSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICK 220

Query: 182 NPGLLDIFRGNQAKRSRKN 193
           N GLLDIFRGNQ KRSRKN
Sbjct: 221 NSGLLDIFRGNQPKRSRKN 238

[Close]

BLAST of MS009151 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 96  LDLKLSPPGLYLRG--KSSDESKSSSPRS-QDSCVSAEV-ESIANLENNLRVEGSSLIAM 155
           L L LSPP    R   +S   S ++SP S   SCVS+E+ +   ++  +   E +S++ +
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLV 69

Query: 156 GCTFCLIYVMVTDADPRCPKCKNPGLLDIFRGN 185
           GC  CL+YVM+++ DP+CPKCK+  LLD    N
Sbjct: 70  GCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]

BLAST of MS009151 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.4e-08
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 90  NENDAYLDLK--LSPPGLYLRGKSSDESKS-SSPRSQDSCVSAEVESIANLENNLRVEGS 149
           N+N   L+L+  LSPP       S   S + S+  S  SCVS+E     N E N  +  +
Sbjct: 5   NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSE----TNQEENETI--T 64

Query: 150 SLIAMGCTFCLIYVMVTDADPRCPKCKNPGLLDIFRGN 185
           S++ +GC  CL+YVM++D DP+CPKCK+  LLD  + N
Sbjct: 65  SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

[Close]

BLAST of MS009151 vs. ExPASy TrEMBL
Match: A0A6J1BYD3 (uncharacterized protein LOC111006584 OS=Momordica charantia OX=3673 GN=LOC111006584 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.7e-98
Identity = 191/196 (97.45%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MASIPQETTKYLVHATGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVELIE 60
           MASIPQETTKYLVHATGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVELIE
Sbjct: 1   MASIPQETTKYLVHATGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVELIE 60

Query: 61  SSNLTMKQSGVPD----KKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESK 120
           SSNLTMKQSGVPD    KKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESK
Sbjct: 61  SSNLTMKQSGVPDKKFQKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESK 120

Query: 121 SSSPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPG 180
           SSSPRSQDSCVSAEVESIAN ENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPG
Sbjct: 121 SSSPRSQDSCVSAEVESIANSENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPG 180

Query: 181 LLDIFRGNQAKRSRKN 193
           LLDIFRGNQAKRSRKN
Sbjct: 181 LLDIFRGNQAKRSRKN 196

[Close]

BLAST of MS009151 vs. ExPASy TrEMBL
Match: A0A6J1FLG8 (uncharacterized protein LOC111445310 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.4e-67
Identity = 144/199 (72.36%), Postives = 160/199 (80.40%), Query Frame = 0


Query: 2   ASIPQETTKYLVHA--------TGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYS 61
           + + QETT+YL  +         GD ESL  S EEF SSVDQLNQ+F+KSL+LKS  + S
Sbjct: 48  SQVEQETTQYLESSGDAKDCAGGGDLESLC-SPEEFSSSVDQLNQNFNKSLVLKSSSSRS 107

Query: 62  SPVELIESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSD 121
           SP+E+ +SS L+MKQS V DKKETKRRYA  MG T NEN AYLDLKLSPPG+YLRGKSS+
Sbjct: 108 SPIEVKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSN 167

Query: 122 ESKSSSPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCK 181
           ESKSSSP+SQDSCVSAEVES  NLENNL VEGS LI MGCTFCL+YVMVTD DPRCP CK
Sbjct: 168 ESKSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICK 227

Query: 182 NPGLLDIFRGNQAKRSRKN 193
           N GLLDIFRGNQ KRSRKN
Sbjct: 228 NSGLLDIFRGNQPKRSRKN 245

[Close]

BLAST of MS009151 vs. ExPASy TrEMBL
Match: A0A6J1FGZ2 (uncharacterized protein LOC111445310 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.4e-67
Identity = 144/199 (72.36%), Postives = 160/199 (80.40%), Query Frame = 0


Query: 2   ASIPQETTKYLVHA--------TGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYS 61
           + + QETT+YL  +         GD ESL  S EEF SSVDQLNQ+F+KSL+LKS  + S
Sbjct: 41  SQVEQETTQYLESSGDAKDCAGGGDLESLC-SPEEFSSSVDQLNQNFNKSLVLKSSSSRS 100

Query: 62  SPVELIESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSD 121
           SP+E+ +SS L+MKQS V DKKETKRRYA  MG T NEN AYLDLKLSPPG+YLRGKSS+
Sbjct: 101 SPIEVKDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSN 160

Query: 122 ESKSSSPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCK 181
           ESKSSSP+SQDSCVSAEVES  NLENNL VEGS LI MGCTFCL+YVMVTD DPRCP CK
Sbjct: 161 ESKSSSPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICK 220

Query: 182 NPGLLDIFRGNQAKRSRKN 193
           N GLLDIFRGNQ KRSRKN
Sbjct: 221 NSGLLDIFRGNQPKRSRKN 238

[Close]

BLAST of MS009151 vs. ExPASy TrEMBL
Match: A0A6J1FMI8 (uncharacterized protein LOC111445310 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.6e-66
Identity = 143/194 (73.71%), Postives = 157/194 (80.93%), Query Frame = 0


Query: 7   ETTKYLVHA--------TGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVEL 66
           ETT+YL  +         GD ESL  S EEF SSVDQLNQ+F+KSL+LKS  + SSP+E+
Sbjct: 43  ETTQYLESSGDAKDCAGGGDLESLC-SPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPIEV 102

Query: 67  IESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESKSS 126
            +SS L+MKQS V DKKETKRRYA  MG T NEN AYLDLKLSPPG+YLRGKSS+ESKSS
Sbjct: 103 KDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNESKSS 162

Query: 127 SPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPGLL 186
           SP+SQDSCVSAEVES  NLENNL VEGS LI MGCTFCL+YVMVTD DPRCP CKN GLL
Sbjct: 163 SPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNSGLL 222

Query: 187 DIFRGNQAKRSRKN 193
           DIFRGNQ KRSRKN
Sbjct: 223 DIFRGNQPKRSRKN 235

[Close]

BLAST of MS009151 vs. ExPASy TrEMBL
Match: A0A6J1FFQ0 (uncharacterized protein LOC111445310 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111445310 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 4.6e-66
Identity = 143/194 (73.71%), Postives = 157/194 (80.93%), Query Frame = 0


Query: 7   ETTKYLVHA--------TGDTESLVHSLEEFYSSVDQLNQDFDKSLILKSLLAYSSPVEL 66
           ETT+YL  +         GD ESL  S EEF SSVDQLNQ+F+KSL+LKS  + SSP+E+
Sbjct: 36  ETTQYLESSGDAKDCAGGGDLESLC-SPEEFSSSVDQLNQNFNKSLVLKSSSSRSSPIEV 95

Query: 67  IESSNLTMKQSGVPDKKETKRRYAVEMGMTPNENDAYLDLKLSPPGLYLRGKSSDESKSS 126
            +SS L+MKQS V DKKETKRRYA  MG T NEN AYLDLKLSPPG+YLRGKSS+ESKSS
Sbjct: 96  KDSSKLSMKQSEVTDKKETKRRYAAGMGTTGNENYAYLDLKLSPPGVYLRGKSSNESKSS 155

Query: 127 SPRSQDSCVSAEVESIANLENNLRVEGSSLIAMGCTFCLIYVMVTDADPRCPKCKNPGLL 186
           SP+SQDSCVSAEVES  NLENNL VEGS LI MGCTFCL+YVMVTD DPRCP CKN GLL
Sbjct: 156 SPKSQDSCVSAEVESNVNLENNLEVEGSPLIVMGCTFCLLYVMVTDDDPRCPICKNSGLL 215

Query: 187 DIFRGNQAKRSRKN 193
           DIFRGNQ KRSRKN
Sbjct: 216 DIFRGNQPKRSRKN 228

[Close]

BLAST of MS009151 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 7.9e-10
Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 96  LDLKLSPPGLYLRG--KSSDESKSSSPRS-QDSCVSAEV-ESIANLENNLRVEGSSLIAM 155
           L L LSPP    R   +S   S ++SP S   SCVS+E+ +   ++  +   E +S++ +
Sbjct: 10  LKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLV 69

Query: 156 GCTFCLIYVMVTDADPRCPKCKNPGLLDIFRGN 185
           GC  CL+YVM+++ DP+CPKCK+  LLD    N
Sbjct: 70  GCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHEN 102

[Close]

BLAST of MS009151 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 0


Query: 90  NENDAYLDLK--LSPPGLYLRGKSSDESKS-SSPRSQDSCVSAEVESIANLENNLRVEGS 149
           N+N   L+L+  LSPP       S   S + S+  S  SCVS+E     N E N  +  +
Sbjct: 5   NKNGPKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSE----TNQEENETI--T 64

Query: 150 SLIAMGCTFCLIYVMVTDADPRCPKCKNPGLLDIFRGN 185
           S++ +GC  CL+YVM++D DP+CPKCK+  LLD  + N
Sbjct: 65  SMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQEN 96

[Close]

BLAST of MS009151 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.8e-04
Identity = 26/73 (35.62%), Postives = 37/73 (50.68%), Query Frame = 0


Query: 108 RGKSSDESKSSSPRSQDSCVSAEVESIANLENNL--RVEGSSLIAMGCTFCLIYVMVTDA 167
           R  SSD S      SQ+SC++   E    + ++     E   ++ MGC  C++YVMV   
Sbjct: 30  RSPSSDTSS-----SQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQE 89

Query: 168 DPRCPKCKNPGLL 179
             RCPKCK   L+
Sbjct: 90  RQRCPKCKCTDLI 97

The following BLAST results are available for this feature:

BLAST of MS009151 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134284.1	5.5e-98	97.45	uncharacterized protein LOC111006584 [Momordica charantia]	[more]
XP_038885898.1	5.9e-68	74.74	uncharacterized protein LOC120076204 [Benincasa hispida]	[more]
KAG6578827.1	1.0e-67	73.50	hypothetical protein SDJN03_23275, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022939372.1	1.1e-66	72.36	uncharacterized protein LOC111445310 isoform X1 [Cucurbita moschata] >XP_0229393...	[more]
XP_022939374.1	1.1e-66	72.36	uncharacterized protein LOC111445310 isoform X2 [Cucurbita moschata]	[more]

BLAST of MS009151 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	1.1e-08	39.78	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	1.4e-08	40.82	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]

BLAST of MS009151 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYD3	2.7e-98	97.45	uncharacterized protein LOC111006584 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1FLG8	5.4e-67	72.36	uncharacterized protein LOC111445310 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FGZ2	5.4e-67	72.36	uncharacterized protein LOC111445310 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FMI8	4.6e-66	73.71	uncharacterized protein LOC111445310 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FFQ0	4.6e-66	73.71	uncharacterized protein LOC111445310 isoform X4 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MS009151 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	7.9e-10	39.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	1.0e-09	40.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT3G52561.1	3.8e-04	35.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33177:SF51	GB\|AAF02129.1	coord: 95..190
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 95..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009151.1	MS009151.1	mRNA