MS009147 (gene) Bitter gourd (TR) v1

Overview


Name	MS009147
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	beta-mannosyltransferase 4-like
Location	scaffold220: 224426 .. 225044 (+)
RNA-Seq Expression	MS009147
Synteny	MS009147

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATGCGATCGGTGCTCAGTCGTTCATCGCTGACTATGTCGACGGTGCGAACCGCCGGCGCCGGCGGTGTCCGGGTCTTCTCCGACGACAAAGGTCGGGTTCTCAGTGAGGAGGAGCGTGCTGCCGAGAACATCTACATCCAGGTTGAATTATTAGTTTCAGCAGAACGTTCGAAAAGTATGAGTAGAAATTAGTAGGAGTCCGATAATCGATCTGTTTTTATCGAATTTTAACTTGTTTTAAACTCAAATGGAAATGGACTACACCGAGAAGCGAAGTTGCTATTTATTTCGGAGGGAATTCCGCACTCTCTTTTTGTGCGAGGAGTTCGTGTTCTTCGATTTATAGTAGCAGGAGATCATATATCTGTTTTATCGAATTTTTGCTTGTTCGAAACTCAAATAGAAGTAGACTGGAGTGAGAATGAAGTTACTATTTACATTAGGCGGTACTTTAATTTATAGTTGATTTTCTGATGTTCGCGTGCAGAAAATGGAGAGAGAAAAGCTGGAGAAGCAGAGGCTGAAGGCAGAGAAGGAAAAGGCAGAGAAGGAGAAAGAACAGTCGGATAAGGTAGTCACTATTGTCATTATTTTAAATTTGGGATCGAGCCAT

mRNA sequence

ATGGCCATGCGATCGGTGCTCAGTCGTTCATCGCTGACTATGTCGACGGTGCGAACCGCCGGCGCCGGCGGTGTCCGGGTCTTCTCCGACGACAAAGGTCGGGTTCTCAGTGAGGAGGAGCGTGCTGCCGAGAACATCTACATCCAGAAAATGGAGAGAGAAAAGCTGGAGAAGCAGAGGCTGAAGGCAGAGAAGGAAAAGGCAGAGAAGGAGAAAGAACAGTCGGATAAGGTAGTCACTATTGTCATTATTTTAAATTTGGGATCGAGCCAT

Coding sequence (CDS)

ATGGCCATGCGATCGGTGCTCAGTCGTTCATCGCTGACTATGTCGACGGTGCGAACCGCCGGCGCCGGCGGTGTCCGGGTCTTCTCCGACGACAAAGGTCGGGTTCTCAGTGAGGAGGAGCGTGCTGCCGAGAACATCTACATCCAGAAAATGGAGAGAGAAAAGCTGGAGAAGCAGAGGCTGAAGGCAGAGAAGGAAAAGGCAGAGAAGGAGAAAGAACAGTCGGATAAGGTAGTCACTATTGTCATTATTTTAAATTTGGGATCGAGCCAT

Protein sequence

MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQRLKAEKEKAEKEKEQSDKVVTIVIILNLGSSH

Homology

[Close]

BLAST of MS009147 vs. NCBI nr
Match: XP_022133918.1 (uncharacterized protein LOC111006346 [Momordica charantia])

HSP 1 Score: 133.7 bits (335), Expect = 8.3e-28
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR
Sbjct: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60

Query: 61 LKAEKEKAEKEKEQSDK 78
          LKAEKEKAEKEKEQSDK
Sbjct: 61 LKAEKEKAEKEKEQSDK 77

[Close]

BLAST of MS009147 vs. NCBI nr
Match: TYK11773.1 (putative uncharacterized transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 2.0e-21
Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSVLSRSSLT  T R AGAGG R  SD KGRVLSEEERAAEN+YIQKMERE+LEK R
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSDKV 79
          LKAEKEKAEKEKEQS+KV
Sbjct: 61 LKAEKEKAEKEKEQSEKV 78

[Close]

BLAST of MS009147 vs. NCBI nr
Match: XP_008456607.1 (PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 5.7e-21
Identity = 65/77 (84.42%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSVLSRSSLT  T R AGAGG R  SD KGRVLSEEERAAEN+YIQKMERE+LEK R
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSDK 78
          LKAEKEKAEKEKEQS+K
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of MS009147 vs. NCBI nr
Match: XP_022961415.1 (uncharacterized protein LOC111461995 [Cucurbita moschata] >KAG6602251.1 hypothetical protein SDJN03_07484, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 110.2 bits (274), Expect = 9.8e-21
Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSV  RSSLT STVRTAG GG R  SD KGRVLSEEERAAEN+YIQKMERE+LEKQR
Sbjct: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60

Query: 61 LKAEKEKAEKEKEQSDK 78
          LKAEKE+AEK++EQS+K
Sbjct: 61 LKAEKERAEKKEEQSEK 77

[Close]

BLAST of MS009147 vs. NCBI nr
Match: KAG7032930.1 (hypothetical protein SDJN02_06981, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.2 bits (274), Expect = 9.8e-21
Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSV  RSSLT STVRTAG GG R  SD KGRVLSEEERAAEN+YIQKMERE+LEKQR
Sbjct: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60

Query: 61 LKAEKEKAEKEKEQSDK 78
          LKAEKE+AEK++EQS+K
Sbjct: 61 LKAEKERAEKKEEQSEK 77

[Close]

BLAST of MS009147 vs. ExPASy TrEMBL
Match: A0A6J1C0J3 (uncharacterized protein LOC111006346 OS=Momordica charantia OX=3673 GN=LOC111006346 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.0e-28
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR
Sbjct: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60

Query: 61 LKAEKEKAEKEKEQSDK 78
          LKAEKEKAEKEKEQSDK
Sbjct: 61 LKAEKEKAEKEKEQSDK 77

[Close]

BLAST of MS009147 vs. ExPASy TrEMBL
Match: A0A5D3CIM5 (Uncharacterized transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001000 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.6e-22
Identity = 66/78 (84.62%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSVLSRSSLT  T R AGAGG R  SD KGRVLSEEERAAEN+YIQKMERE+LEK R
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSDKV 79
          LKAEKEKAEKEKEQS+KV
Sbjct: 61 LKAEKEKAEKEKEQSEKV 78

[Close]

BLAST of MS009147 vs. ExPASy TrEMBL
Match: A0A1S3C383 (uncharacterized protein LOC103496516 OS=Cucumis melo OX=3656 GN=LOC103496516 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.8e-21
Identity = 65/77 (84.42%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSVLSRSSLT  T R AGAGG R  SD KGRVLSEEERAAEN+YIQKMERE+LEK R
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSDK 78
          LKAEKEKAEKEKEQS+K
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of MS009147 vs. ExPASy TrEMBL
Match: A0A6J1HC61 (uncharacterized protein LOC111461995 OS=Cucurbita moschata OX=3662 GN=LOC111461995 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.7e-21
Identity = 63/77 (81.82%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSV  RSSLT STVRTAG GG R  SD KGRVLSEEERAAEN+YIQKMERE+LEKQR
Sbjct: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60

Query: 61 LKAEKEKAEKEKEQSDK 78
          LKAEKE+AEK++EQS+K
Sbjct: 61 LKAEKERAEKKEEQSEK 77

[Close]

BLAST of MS009147 vs. ExPASy TrEMBL
Match: A0A6J1FMH8 (beta-mannosyltransferase 4-like OS=Cucurbita moschata OX=3662 GN=LOC111445304 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 64/77 (83.12%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTMSTVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQR 60
          MAMRSVLSR S T  T+R +G GG R FSD KGRVLSEEERAAEN+YIQKMEREKLEKQR
Sbjct: 1  MAMRSVLSRISPTPLTMRASGPGGFRYFSDGKGRVLSEEERAAENVYIQKMEREKLEKQR 60

Query: 61 LKAEKEKAEKEKEQSDK 78
          LKAEKEKAEKEKEQS+K
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of MS009147 vs. TAIR 10
Match: AT5G04750.1 (F1F0-ATPase inhibitor protein, putative )

HSP 1 Score: 58.5 bits (140), Expect = 3.2e-09
Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 0


Query: 15 STVRTAGAGGVRVFSDDKGRVLSEEERAAENIYIQKMEREKLEKQRLKAEKEKAEKEKEQ 74
          S V T G   +R FSDDKGRVLSEEERA E++YIQKMERE+LEK++ K E++K + EK  
Sbjct: 27 SVVSTRGP-AIRYFSDDKGRVLSEEERAKESMYIQKMERERLEKKK-KLEQDKLDGEKGS 86

Query: 75 SDK 78
          ++K
Sbjct: 87 ANK 87

The following BLAST results are available for this feature:

BLAST of MS009147 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133918.1	8.3e-28	100.00	uncharacterized protein LOC111006346 [Momordica charantia]	[more]
TYK11773.1	2.0e-21	84.62	putative uncharacterized transmembrane protein [Cucumis melo var. makuwa]	[more]
XP_008456607.1	5.7e-21	84.42	PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo]	[more]
XP_022961415.1	9.8e-21	81.82	uncharacterized protein LOC111461995 [Cucurbita moschata] >KAG6602251.1 hypothet...	[more]
KAG7032930.1	9.8e-21	81.82	hypothetical protein SDJN02_06981, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MS009147 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS009147 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0J3	4.0e-28	100.00	uncharacterized protein LOC111006346 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A5D3CIM5	9.6e-22	84.62	Uncharacterized transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C383	2.8e-21	84.42	uncharacterized protein LOC103496516 OS=Cucumis melo OX=3656 GN=LOC103496516 PE=...	[more]
A0A6J1HC61	4.7e-21	81.82	uncharacterized protein LOC111461995 OS=Cucurbita moschata OX=3662 GN=LOC1114619...	[more]
A0A6J1FMH8	1.1e-20	83.12	beta-mannosyltransferase 4-like OS=Cucurbita moschata OX=3662 GN=LOC111445304 PE...	[more]

BLAST of MS009147 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04750.1	3.2e-09	60.32	F1F0-ATPase inhibitor protein, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..78
None	No IPR available	PANTHER	PTHR33878	OS08G0559000 PROTEIN	coord: 1..77
None	No IPR available	PANTHER	PTHR33878:SF4	OS02G0533800 PROTEIN	coord: 1..77
IPR007648	Mitochondrial ATPase inhibitor	PFAM	PF04568	IATP	coord: 19..71 e-value: 3.6E-5 score: 24.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009147.1	MS009147.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032780	negative regulation of ATP-dependent activity
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0042030	ATPase inhibitor activity