MS009053 (gene) Bitter gourd (TR) v1

Overview


Name	MS009053
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ubiquitin-conjugating enzyme E2 variant 1D
Location	scaffold385: 510703 .. 512281 (+)
RNA-Seq Expression	MS009053
Synteny	MS009053

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCCTCGAAGCTTCAGATTACTGGAAGAACTTGAGAGAGGTGAGAAAGGAATTGGGGATGGAACTGTCAGTTATGGAATGGACGATGCTGATGATATCTATATGGCTTCTTGGACAGGAACTATTATTGGGCCACCTAATGTGAGTTCCTTTCCATTATTTTTGTCCTTTTCTTTTGGTTTCTCTAATGAGATCTGGGCCTTCCTTTGTAAAAGAAAAAAAATGATATGGACAATGGTTTAAATATCAGTATCTACACATCTCAAGTGTAGAATTTCACAGAAATGTTAATCATAATTTTGCCATCATCAGAAATTTAGAGAAAATTGAATTCAGATTTTAGTTAACCAAGTTTTGTCACAAATACTTGCCAGATTCCATTAAACCGTGTCTGGCATAGTATCAGCGGATACTATTTTTATAGTATGAAAACATTGATACTTTGATCAATATTATTAAGGATTATATTCATATAATTTTTATGTTAAATATTAATATTGTCGATGATGTTGAAGAATGTTGGTTTTTTGTCAATATTTTCTTTCTCGGTAATCCACTATGTGTATTTTTATTTGTGCTAAAGAATGTCAGTGATAAGCTACAGCCTACAAGGTAACATCATTTGAGCATAAGCAGACAGTGAGATAATGTAAGCTTATACGATTAGACTATAGAAGGACTGGAAAGAAATAAACAAAGCTTCATGCATGTTTAACATATTTAAACTCAGCATTCGGTTGGTTGACATTCCCCGTACTTTCATGCTAAAGGAGTGAAATTTAGGAGTTGAAGTAGTCAAGATCCCGTTGGAATTGATTAGTGTCCTTGTAATTTTGATAATGATCTGAATTGAGTTTTCCCAAGCTACATCATTCTCTAATATCTGTGTTGCTCATTGAACTCATAGTTGGTATATTCTATCCTAGAAACTCCCATAAAGTCAGTGGTCTATGGTGCAAGTTTGATATTTTTTTTCCTTTTTAAATGCGTAGTAAAACATAACTAATTTTCTGTCTTTACCACGAAAATCCATGATAAAAGAATATATGTATTTCTGATTGCCTCTCTCGTGTTAATAAAAATGACTGCCTTTAGTATCGCAGTGTTATTTCAATGGCAAATGTTGATGTGTTCTTATTCTTTATTATTGTTGTTGTTGGGGAGGGGTGAAAGAAATAGCGAATTTAATTGGTGCCTTGCCTTTTAGACTGTTCATGAAGGACGCATCTATCAACTCAAGCTAGTCTGTGGACAGGAGTACCCTGATAATCCTCCAAATGTTAGATTTCAGACTCGGATTAATATGACCTGTGTCAACCCAGAAACTGGGGTGGTATGTGATAATTTTGTGAAGCATTCTTGCTGCAATGTGATTGAAAATAAACTGACAGCTTGTATGAATTGCTAGGTTGAACCGAGCCTTTTCCCCATGCTTGCTAATTGGCAGAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGGCTAAGTCAGCCTTCTGAAGGTGAGTTAGTTTACTTCTCATTATGGAGGGCACATCCCTCTCGT

mRNA sequence

GTTCCTCGAAGCTTCAGATTACTGGAAGAACTTGAGAGAGGTGAGAAAGGAATTGGGGATGGAACTGTCAGTTATGGAATGGACGATGCTGATGATATCTATATGGCTTCTTGGACAGGAACTATTATTGGGCCACCTAATACTGTTCATGAAGGACGCATCTATCAACTCAAGCTAGTCTGTGGACAGGAGTACCCTGATAATCCTCCAAATGTTAGATTTCAGACTCGGATTAATATGACCTGTGTCAACCCAGAAACTGGGGTGGTTGAACCGAGCCTTTTCCCCATGCTTGCTAATTGGCAGAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGGCTAAGTCAGCCTTCTGAAGGTGAGTTAGTTTACTTCTCATTATGGAGGGCACATCCCTCTCGT

Coding sequence (CDS)

GTTCCTCGAAGCTTCAGATTACTGGAAGAACTTGAGAGAGGTGAGAAAGGAATTGGGGATGGAACTGTCAGTTATGGAATGGACGATGCTGATGATATCTATATGGCTTCTTGGACAGGAACTATTATTGGGCCACCTAATACTGTTCATGAAGGACGCATCTATCAACTCAAGCTAGTCTGTGGACAGGAGTACCCTGATAATCCTCCAAATGTTAGATTTCAGACTCGGATTAATATGACCTGTGTCAACCCAGAAACTGGGGTGGTTGAACCGAGCCTTTTCCCCATGCTTGCTAATTGGCAGAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGGCTAAGTCAGCCTTCTGAAGGTGAGTTAGTTTACTTCTCATTATGGAGGGCACATCCCTCTCGT

Protein sequence

VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLVCGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTSPQNRRLSQPSEGELVYFSLWRAHPSR

Homology

[Close]

BLAST of MS009053 vs. NCBI nr
Match: XP_022990018.1 (ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 [Cucurbita maxima] >XP_022990019.1 ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 [Cucurbita maxima] >XP_022990020.1 ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 277.7 bits (709), Expect = 5.7e-71
Identity = 128/136 (94.12%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQ+YPDNPP+VRFQTRINMTCVNPETGVVEPSLFPML+NWQREHTMEDILMQLKKEMTS
Sbjct: 70  CGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEMTS 129

Query: 121 PQNRRLSQPSEGELVY 137
           PQNRRLSQPSEGE ++
Sbjct: 130 PQNRRLSQPSEGEFIH 145

[Close]

BLAST of MS009053 vs. NCBI nr
Match: XP_023540949.1 (ubiquitin-conjugating enzyme E2 variant 1A isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540958.1 ubiquitin-conjugating enzyme E2 variant 1A isoform X1 [Cucurbita pepo subsp. pepo] >XP_023540965.1 ubiquitin-conjugating enzyme E2 variant 1A isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.7 bits (709), Expect = 5.7e-71
Identity = 128/136 (94.12%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQ+YPDNPP+VRFQTRINMTCVNPETGVVEPSLFPML+NWQREHTMEDILMQLKKEMTS
Sbjct: 70  CGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEMTS 129

Query: 121 PQNRRLSQPSEGELVY 137
           PQNRRLSQPSEGE ++
Sbjct: 130 PQNRRLSQPSEGEFIH 145

[Close]

BLAST of MS009053 vs. NCBI nr
Match: XP_022146363.1 (uncharacterized protein LOC111015591 [Momordica charantia])

HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPRSFRLLEELERGEKGIGDGTVSYGMD ADDIYM+SWTGTIIGPPNTVHEGRIYQLKLV
Sbjct: 545 VPRSFRLLEELERGEKGIGDGTVSYGMDAADDIYMSSWTGTIIGPPNTVHEGRIYQLKLV 604

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS
Sbjct: 605 CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 664

Query: 121 PQNRRLSQPSEG 133
           PQNRRLSQPSEG
Sbjct: 665 PQNRRLSQPSEG 676

[Close]

BLAST of MS009053 vs. NCBI nr
Match: XP_016903717.1 (PREDICTED: uncharacterized protein LOC103483035 [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKL 
Sbjct: 574 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 633

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQ+YPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS
Sbjct: 634 CGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 693

Query: 121 PQNRRLSQPSEG 133
           PQNRRLSQPSEG
Sbjct: 694 PQNRRLSQPSEG 705

[Close]

BLAST of MS009053 vs. NCBI nr
Match: TYK05558.1 (zinc finger protein VAR3 [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQ+YPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS
Sbjct: 70  CGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 129

Query: 121 PQNRRLSQPSEG 133
           PQNRRLSQPSEG
Sbjct: 130 PQNRRLSQPSEG 141

[Close]

BLAST of MS009053 vs. ExPASy Swiss-Prot
Match: Q93YP0 (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.6e-62
Identity = 107/132 (81.06%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTI+GPPNT +EG+I+QLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CG+EYP++PP VRFQTRINM CVNPETGVVEPSLFPML NW+RE+TMEDIL++LKKEM +
Sbjct: 70  CGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMT 129

Query: 121 PQNRRLSQPSEG 133
             NR+L+QP EG
Sbjct: 130 SHNRKLAQPPEG 141

[Close]

BLAST of MS009053 vs. ExPASy Swiss-Prot
Match: Q9CAB6 (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.4e-58
Identity = 102/132 (77.27%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +EG+I+QLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CG++YP++PP VRFQ+RINM CVNPE GVV+PS FPML+NW+RE TMED+L+QLKKEM S
Sbjct: 70  CGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMS 129

Query: 121 PQNRRLSQPSEG 133
            QNR+L+QP EG
Sbjct: 130 SQNRKLAQPLEG 141

[Close]

BLAST of MS009053 vs. ExPASy Swiss-Prot
Match: Q9SVD7 (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.7e-57
Identity = 102/132 (77.27%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHEGRIYQLKL 
Sbjct: 12  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           C ++YP+ PP VRF +R+NM CVN ETGVV+P  F +LANWQRE+TMEDIL+QLKKEM++
Sbjct: 72  CDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKKEMST 131

Query: 121 PQNRRLSQPSEG 133
             NR+L QP EG
Sbjct: 132 SHNRKLVQPPEG 143

[Close]

BLAST of MS009053 vs. ExPASy Swiss-Prot
Match: Q9SJ44 (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.1e-56
Identity = 101/132 (76.52%), Postives = 113/132 (85.61%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHEGRIYQLKL 
Sbjct: 11  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 70

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           C ++YP+ PP VRF +RINMTCVN +TGVV+   F +LANWQR++TMEDIL QLKKEM +
Sbjct: 71  CDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMAA 130

Query: 121 PQNRRLSQPSEG 133
             NR+L QP EG
Sbjct: 131 SHNRKLVQPPEG 142

[Close]

BLAST of MS009053 vs. ExPASy Swiss-Prot
Match: P53152 (Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MMS2 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.3e-41
Identity = 75/133 (56.39%), Postives = 98/133 (73.68%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELE+GEKG G  + SYG+ D+DDI M  W GTI+GPP++ HE RIY L + 
Sbjct: 4   VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSID 63

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CG  YPD+PP V F ++IN+ CVNP TG V+   F  L +W+R +TME +L+ L+KEM +
Sbjct: 64  CGPNYPDSPPKVTFISKINLPCVNPTTGEVQTD-FHTLRDWKRAYTMETLLLDLRKEMAT 123

Query: 121 PQNRRLSQPSEGE 134
           P N++L QP EGE
Sbjct: 124 PANKKLRQPKEGE 135

[Close]

BLAST of MS009053 vs. ExPASy TrEMBL
Match: A0A6J1JNZ0 (ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487038 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.8e-71
Identity = 128/136 (94.12%), Postives = 134/136 (98.53%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQ+YPDNPP+VRFQTRINMTCVNPETGVVEPSLFPML+NWQREHTMEDILMQLKKEMTS
Sbjct: 70  CGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEMTS 129

Query: 121 PQNRRLSQPSEGELVY 137
           PQNRRLSQPSEGE ++
Sbjct: 130 PQNRRLSQPSEGEFIH 145

[Close]

BLAST of MS009053 vs. ExPASy TrEMBL
Match: A0A6J1CYD7 (uncharacterized protein LOC111015591 OS=Momordica charantia OX=3673 GN=LOC111015591 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.1e-71
Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPRSFRLLEELERGEKGIGDGTVSYGMD ADDIYM+SWTGTIIGPPNTVHEGRIYQLKLV
Sbjct: 545 VPRSFRLLEELERGEKGIGDGTVSYGMDAADDIYMSSWTGTIIGPPNTVHEGRIYQLKLV 604

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS
Sbjct: 605 CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 664

Query: 121 PQNRRLSQPSEG 133
           PQNRRLSQPSEG
Sbjct: 665 PQNRRLSQPSEG 676

[Close]

BLAST of MS009053 vs. ExPASy TrEMBL
Match: A0A5D3C2X2 (Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3042G00070 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.0e-71
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQ+YPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS
Sbjct: 70  CGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 129

Query: 121 PQNRRLSQPSEG 133
           PQNRRLSQPSEG
Sbjct: 130 PQNRRLSQPSEG 141

[Close]

BLAST of MS009053 vs. ExPASy TrEMBL
Match: A0A1S4E671 (uncharacterized protein LOC103483035 OS=Cucumis melo OX=3656 GN=LOC103483035 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.0e-71
Identity = 128/132 (96.97%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKL 
Sbjct: 574 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 633

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQ+YPDNPPNVRFQTR+NMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS
Sbjct: 634 CGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 693

Query: 121 PQNRRLSQPSEG 133
           PQNRRLSQPSEG
Sbjct: 694 PQNRRLSQPSEG 705

[Close]

BLAST of MS009053 vs. ExPASy TrEMBL
Match: A0A6J1HM74 (ubiquitin-conjugating enzyme E2 variant 1B isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464879 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.2e-70
Identity = 127/132 (96.21%), Postives = 131/132 (99.24%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CGQ+YPDNPP+VRFQTRINMTCVNPETGVVEPSLFPML+NWQREHTMEDILMQLKKEMTS
Sbjct: 70  CGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEMTS 129

Query: 121 PQNRRLSQPSEG 133
           PQNRRLSQPSEG
Sbjct: 130 PQNRRLSQPSEG 141

[Close]

BLAST of MS009053 vs. TAIR 10
Match: AT1G23260.1 (MMS ZWEI homologue 1 )

HSP 1 Score: 238.0 bits (606), Expect = 4.7e-63
Identity = 107/132 (81.06%), Postives = 122/132 (92.42%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTI+GPPNT +EG+I+QLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CG+EYP++PP VRFQTRINM CVNPETGVVEPSLFPML NW+RE+TMEDIL++LKKEM +
Sbjct: 70  CGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMT 129

Query: 121 PQNRRLSQPSEG 133
             NR+L+QP EG
Sbjct: 130 SHNRKLAQPPEG 141

[Close]

BLAST of MS009053 vs. TAIR 10
Match: AT1G70660.1 (MMS ZWEI homologue 2 )

HSP 1 Score: 225.7 bits (574), Expect = 2.4e-59
Identity = 102/132 (77.27%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +EG+I+QLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CG++YP++PP VRFQ+RINM CVNPE GVV+PS FPML+NW+RE TMED+L+QLKKEM S
Sbjct: 70  CGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMS 129

Query: 121 PQNRRLSQPSEG 133
            QNR+L+QP EG
Sbjct: 130 SQNRKLAQPLEG 141

[Close]

BLAST of MS009053 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 2.4e-59
Identity = 102/132 (77.27%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +EG+I+QLKL 
Sbjct: 446 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLF 505

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CG++YP++PP VRFQ+RINM CVNPE GVV+PS FPML+NW+RE TMED+L+QLKKEM S
Sbjct: 506 CGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMS 565

Query: 121 PQNRRLSQPSEG 133
            QNR+L+QP EG
Sbjct: 566 SQNRKLAQPLEG 577

[Close]

BLAST of MS009053 vs. TAIR 10
Match: AT1G70660.2 (MMS ZWEI homologue 2 )

HSP 1 Score: 225.7 bits (574), Expect = 2.4e-59
Identity = 102/132 (77.27%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +EG+I+QLKL 
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLF 69

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           CG++YP++PP VRFQ+RINM CVNPE GVV+PS FPML+NW+RE TMED+L+QLKKEM S
Sbjct: 70  CGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMS 129

Query: 121 PQNRRLSQPSEG 133
            QNR+L+QP EG
Sbjct: 130 SQNRKLAQPLEG 141

[Close]

BLAST of MS009053 vs. TAIR 10
Match: AT3G52560.1 (ubiquitin E2 variant 1D-4 )

HSP 1 Score: 223.4 bits (568), Expect = 1.2e-58
Identity = 102/132 (77.27%), Postives = 115/132 (87.12%), Query Frame = 0


Query: 1   VPRSFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLV 60
           VPR+FRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHEGRIYQLKL 
Sbjct: 12  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71

Query: 61  CGQEYPDNPPNVRFQTRINMTCVNPETGVVEPSLFPMLANWQREHTMEDILMQLKKEMTS 120
           C ++YP+ PP VRF +R+NM CVN ETGVV+P  F +LANWQRE+TMEDIL+QLKKEM++
Sbjct: 72  CDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKKEMST 131

Query: 121 PQNRRLSQPSEG 133
             NR+L QP EG
Sbjct: 132 SHNRKLVQPPEG 143

The following BLAST results are available for this feature:

BLAST of MS009053 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990018.1	5.7e-71	94.12	ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 [Cucurbita maxima] >X...	[more]
XP_023540949.1	5.7e-71	94.12	ubiquitin-conjugating enzyme E2 variant 1A isoform X1 [Cucurbita pepo subsp. pep...	[more]
XP_022146363.1	1.3e-70	98.48	uncharacterized protein LOC111015591 [Momordica charantia]	[more]
XP_016903717.1	1.7e-70	96.97	PREDICTED: uncharacterized protein LOC103483035 [Cucumis melo]	[more]
TYK05558.1	1.7e-70	96.97	zinc finger protein VAR3 [Cucumis melo var. makuwa]	[more]

BLAST of MS009053 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YP0	6.6e-62	81.06	Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q9CAB6	3.4e-58	77.27	Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q9SVD7	1.7e-57	77.27	Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
Q9SJ44	4.1e-56	76.52	Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
P53152	8.3e-41	56.39	Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of MS009053 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNZ0	2.8e-71	94.12	ubiquitin-conjugating enzyme E2 variant 1A-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1CYD7	6.1e-71	98.48	uncharacterized protein LOC111015591 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A5D3C2X2	8.0e-71	96.97	Zinc finger protein VAR3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S4E671	8.0e-71	96.97	uncharacterized protein LOC103483035 OS=Cucumis melo OX=3656 GN=LOC103483035 PE=...	[more]
A0A6J1HM74	5.2e-70	96.21	ubiquitin-conjugating enzyme E2 variant 1B isoform X1 OS=Cucurbita moschata OX=3...	[more]

BLAST of MS009053 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23260.1	4.7e-63	81.06	MMS ZWEI homologue 1	[more]
AT1G70660.1	2.4e-59	77.27	MMS ZWEI homologue 2	[more]
AT1G70650.2	2.4e-59	77.27	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G70660.2	2.4e-59	77.27	MMS ZWEI homologue 2	[more]
AT3G52560.1	1.2e-58	77.27	ubiquitin E2 variant 1D-4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 5..143 e-value: 3.9E-9 score: 46.4
None	No IPR available	PANTHER	PTHR24068:SF344	UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE	coord: 3..134
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..134
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 32..125 e-value: 9.8E-16 score: 57.7
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 2..146 score: 34.112144
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..136 e-value: 5.2E-42 score: 144.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 2..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009053.1	MS009053.1	mRNA