MS009034 (gene) Bitter gourd (TR) v1

Overview


Name	MS009034
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	B box-type domain-containing protein
Location	scaffold385: 364575 .. 365817 (-)
RNA-Seq Expression	MS009034
Synteny	MS009034

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCGGATTGGCTTAGTTCTCTTTTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAACCGGAAAAATGAGAAGAACGTGTTCTGTTTAGACTGTGGCGTTGCCATCTGCAGGCATTGCCTGATCTCTCATTGCATTCATCGGCGCCTACAGATCTGCAAGTACGTCTATCAGTATGTCGTCCGGGTGCACGACTTGCAGAACCACCTTGATTGTTGCAACATTCAGGTATCCCTTCAGTACCACCTTAAATTATGCAAACTTCTAGCTCTAAAGTCGTATTGTTATCTGTTGCTTCTGGTGCAAGTTGTAACCATTTCAAAAGTCACATTATTGTCTTGTTTTCAAACTGCCACCAATCAGAATAATATGTTTTCTTCGATCGAGTCTATTCTCGTAAATGAAAAATGACTCCCAGAGGAACAACCAGGAAGCAGTGAATTCAATCACAAAAGGAAAAGTTCTGTTATTGGTACATTGGAATTCTTTTTGGTCAATGATCGAGTGTTCTAGTGATGGCATAAGTACAAGTAAGAGTGATAGTACTTGGACTGATAGCTGTCTATTGTAGTAGTATAAATCACGAATATTCTCTCGTTCGAGGCTATTTCCACGATTCGACTTGCTAGCTAAATACATTACTTCTTATACTCACCCCCTTCCCCATGATGGTTATGGTAAATTTAGGACTAAAGTATTGAATGTTCGATTCACCAGACATATAAGATAAACGGGGAGAAGGCTGTTCATCTGAGTCCCCGTCCACAGTCAAAAGATTCGAAACCGTCGACAAAGTTGAAGTTTGGAGGTACTTGTGAAGCTTGCGGGAGATACATACAAGACTTGCCTAACCGCTTTTGCTCAATCGCTTGCAAAGTAAATGAAATTTCCTTGTCATCTCTTTCAACACTTTTACATATCTCACTAGATTAAACTCAGTGATTAACAACTTTTTCAGGTGTCTATGGCTCCAGTGGAACTCAATGATCAAAGCAGCAGATTCATGGCTTCGGAGCCGAATCTTAAAGACCTTACATGCAAGGAAAATCACAACCCAGAAACAAACACAAGTGAAATTGAATCATCTATATCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCGAACGAAGTCATCCTTGAACGCAAAGAAGCTTCTGCACAAAAGGAAAGGGATTCCGCACCGATCACCTCTAAAG

mRNA sequence

CAGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCGGATTGGCTTAGTTCTCTTTTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAACCGGAAAAATGAGAAGAACGTGTTCTGTTTAGACTGTGGCGTTGCCATCTGCAGGCATTGCCTGATCTCTCATTGCATTCATCGGCGCCTACAGATCTGCAAGTACGTCTATCAGTATGTCGTCCGGGTGCACGACTTGCAGAACCACCTTGATTGTTGCAACATTCAGACATATAAGATAAACGGGGAGAAGGCTGTTCATCTGAGTCCCCGTCCACAGTCAAAAGATTCGAAACCGTCGACAAAGTTGAAGTTTGGAGGTACTTGTGAAGCTTGCGGGAGATACATACAAGACTTGCCTAACCGCTTTTGCTCAATCGCTTGCAAAGTGTCTATGGCTCCAGTGGAACTCAATGATCAAAGCAGCAGATTCATGGCTTCGGAGCCGAATCTTAAAGACCTTACATGCAAGGAAAATCACAACCCAGAAACAAACACAAGTGAAATTGAATCATCTATATCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCGAACGAAGTCATCCTTGAACGCAAAGAAGCTTCTGCACAAAAGGAAAGGGATTCCGCACCGATCACCTCTAAAG

Coding sequence (CDS)

CAGGCAGGATGCAAGATTTATCTGAAGAAAAGGAAAGCGGATTGGCTTAGTTCTCTTTTGCAAAGCAAATTTTTTGGTTCTTGTGTTCATCATCAAAACAACCGGAAAAATGAGAAGAACGTGTTCTGTTTAGACTGTGGCGTTGCCATCTGCAGGCATTGCCTGATCTCTCATTGCATTCATCGGCGCCTACAGATCTGCAAGTACGTCTATCAGTATGTCGTCCGGGTGCACGACTTGCAGAACCACCTTGATTGTTGCAACATTCAGACATATAAGATAAACGGGGAGAAGGCTGTTCATCTGAGTCCCCGTCCACAGTCAAAAGATTCGAAACCGTCGACAAAGTTGAAGTTTGGAGGTACTTGTGAAGCTTGCGGGAGATACATACAAGACTTGCCTAACCGCTTTTGCTCAATCGCTTGCAAAGTGTCTATGGCTCCAGTGGAACTCAATGATCAAAGCAGCAGATTCATGGCTTCGGAGCCGAATCTTAAAGACCTTACATGCAAGGAAAATCACAACCCAGAAACAAACACAAGTGAAATTGAATCATCTATATCAATGGCTGAATCAACTGAAGAGATCAAAGCATGGCGAACGAAGTCATCCTTGAACGCAAAGAAGCTTCTGCACAAAAGGAAAGGGATTCCGCACCGATCACCTCTAAAG

Protein sequence

QAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIHRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTSEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK

Homology

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BLAST of MS009034 vs. NCBI nr
Match: XP_022146424.1 (uncharacterized protein LOC111015643 isoform X2 [Momordica charantia])

HSP 1 Score: 462.6 bits (1189), Expect = 1.9e-126
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   QAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCI 60
           QAGCKIYLKKRKADWLSSLLQSKFFGSC HHQNNRKNEKNVFCLDCGVAICRHCLISHCI
Sbjct: 8   QAGCKIYLKKRKADWLSSLLQSKFFGSCGHHQNNRKNEKNVFCLDCGVAICRHCLISHCI 67

Query: 61  HRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 68  HRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 127

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNT
Sbjct: 128 GTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNT 187

Query: 181 SEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           SEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK
Sbjct: 188 SEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 231

[Close]

BLAST of MS009034 vs. NCBI nr
Match: XP_022146423.1 (uncharacterized protein LOC111015643 isoform X1 [Momordica charantia])

HSP 1 Score: 460.7 bits (1184), Expect = 7.3e-126
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61
           AGCKIYLKKRKADWLSSLLQSKFFGSC HHQNNRKNEKNVFCLDCGVAICRHCLISHCIH
Sbjct: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCGHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61

Query: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121
           RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG
Sbjct: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121

Query: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181
           TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS
Sbjct: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181

Query: 182 EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK
Sbjct: 182 EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 224

[Close]

BLAST of MS009034 vs. NCBI nr
Match: XP_004142823.1 (uncharacterized protein LOC101210438 [Cucumis sativus] >KGN51458.1 hypothetical protein Csa_009445 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 1.0e-111
Identity = 199/224 (88.84%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61
           AGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFC+DCG+AICRHCLISHC+H
Sbjct: 2   AGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVH 61

Query: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121
           RRLQICKYVYQYVVRV DLQ+HLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG
Sbjct: 62  RRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121

Query: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181
           TCEACGRYIQDLPNRFCSIACKVSM P+ELN+Q  RFM SEPNLKD+  KENHN E NTS
Sbjct: 122 TCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFMDSEPNLKDIPWKENHNLEINTS 181

Query: 182 EIE-SSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           E+E SSIS+AESTEEIKAWR K  LN KKLLHKRKGIPHRSPLK
Sbjct: 182 EMESSSISVAESTEEIKAWRVKMVLNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of MS009034 vs. NCBI nr
Match: XP_022963423.1 (uncharacterized protein LOC111463631 [Cucurbita moschata] >XP_023545157.1 uncharacterized protein LOC111804538 [Cucurbita pepo subsp. pepo] >KAG6601888.1 hypothetical protein SDJN03_07121, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032586.1 hypothetical protein SDJN02_06635 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.0 bits (1055), Expect = 6.6e-111
Identity = 196/223 (87.89%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61
           AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFC+DCG+AICRHCLISHCIH
Sbjct: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIH 61

Query: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121
           RRLQICKYVYQYVVRV DLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG
Sbjct: 62  RRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121

Query: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181
           TCEACGRYIQDLPNRFCSIACKVSM PVELN+QS R + S+ +  +++ KENHN E NTS
Sbjct: 122 TCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNTS 181

Query: 182 EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           E++SSISMAESTEEIKAW+ KS LN +KLLHKRKGIPHRSPLK
Sbjct: 182 EMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of MS009034 vs. NCBI nr
Match: XP_022990994.1 (uncharacterized protein LOC111487719 [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 5.6e-110
Identity = 195/223 (87.44%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61
           AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFC+DCG+AICRHCLISHCIH
Sbjct: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIH 61

Query: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121
           RRLQICKYVYQYVVRV DLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG
Sbjct: 62  RRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121

Query: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181
           TCEACGRYIQDLPNRFCSIACKVSM  VELN+QS R + S+ +  +++ KENHN E NTS
Sbjct: 122 TCEACGRYIQDLPNRFCSIACKVSMVSVELNNQSCRCITSKSDPNEISWKENHNVEPNTS 181

Query: 182 EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           E++SSISMAESTEEIKAW+ KS LN +KLLHKRKGIPHRSPLK
Sbjct: 182 EMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

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BLAST of MS009034 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-28
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 11  RKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIHRRLQICKYV 70
           +K  WL +L   KFF  C +H+  +KNE+NV CLDC  ++C HC+ SH  HR LQ+ +YV
Sbjct: 4   QKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYV 63

Query: 71  YQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYI 130
           Y  VVR+ DLQ  +DC N+Q Y IN  K V +  RPQ++  K +     G  C +C R +
Sbjct: 64  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGA-----GNYCTSCDRSL 123

Query: 131 QDLPNRFCSIACKVSMAPVELND 154
           Q+ P   CS+ CKV        D
Sbjct: 124 QE-PYIHCSLGCKVDFVMKRYRD 140

[Close]

BLAST of MS009034 vs. ExPASy TrEMBL
Match: A0A6J1CY39 (uncharacterized protein LOC111015643 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015643 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.3e-127
Identity = 223/224 (99.55%), Postives = 223/224 (99.55%), Query Frame = 0


Query: 1   QAGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCI 60
           QAGCKIYLKKRKADWLSSLLQSKFFGSC HHQNNRKNEKNVFCLDCGVAICRHCLISHCI
Sbjct: 8   QAGCKIYLKKRKADWLSSLLQSKFFGSCGHHQNNRKNEKNVFCLDCGVAICRHCLISHCI 67

Query: 61  HRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 120
           HRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG
Sbjct: 68  HRRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFG 127

Query: 121 GTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNT 180
           GTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNT
Sbjct: 128 GTCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNT 187

Query: 181 SEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           SEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK
Sbjct: 188 SEIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 231

[Close]

BLAST of MS009034 vs. ExPASy TrEMBL
Match: A0A6J1CYJ3 (uncharacterized protein LOC111015643 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015643 PE=4 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.5e-126
Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61
           AGCKIYLKKRKADWLSSLLQSKFFGSC HHQNNRKNEKNVFCLDCGVAICRHCLISHCIH
Sbjct: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCGHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61

Query: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121
           RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG
Sbjct: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121

Query: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181
           TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS
Sbjct: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181

Query: 182 EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK
Sbjct: 182 EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 224

[Close]

BLAST of MS009034 vs. ExPASy TrEMBL
Match: A0A0A0KPD0 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G550220 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 4.9e-112
Identity = 199/224 (88.84%), Postives = 209/224 (93.30%), Query Frame = 0


Query: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61
           AGCKIYLKKRK DWL+SLLQSKFFGSCVHHQNNRKNEKNVFC+DCG+AICRHCLISHC+H
Sbjct: 2   AGCKIYLKKRKTDWLNSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCVH 61

Query: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121
           RRLQICKYVYQYVVRV DLQ+HLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG
Sbjct: 62  RRLQICKYVYQYVVRVPDLQDHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121

Query: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181
           TCEACGRYIQDLPNRFCSIACKVSM P+ELN+Q  RFM SEPNLKD+  KENHN E NTS
Sbjct: 122 TCEACGRYIQDLPNRFCSIACKVSMVPMELNNQCCRFMDSEPNLKDIPWKENHNLEINTS 181

Query: 182 EIE-SSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           E+E SSIS+AESTEEIKAWR K  LN KKLLHKRKGIPHRSPLK
Sbjct: 182 EMESSSISVAESTEEIKAWRVKMVLNPKKLLHKRKGIPHRSPLK 225

[Close]

BLAST of MS009034 vs. ExPASy TrEMBL
Match: A0A6J1HHR7 (uncharacterized protein LOC111463631 OS=Cucurbita moschata OX=3662 GN=LOC111463631 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.2e-111
Identity = 196/223 (87.89%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61
           AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFC+DCG+AICRHCLISHCIH
Sbjct: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIH 61

Query: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121
           RRLQICKYVYQYVVRV DLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG
Sbjct: 62  RRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121

Query: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181
           TCEACGRYIQDLPNRFCSIACKVSM PVELN+QS R + S+ +  +++ KENHN E NTS
Sbjct: 122 TCEACGRYIQDLPNRFCSIACKVSMVPVELNNQSCRCITSKSDPNEISWKENHNVEPNTS 181

Query: 182 EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           E++SSISMAESTEEIKAW+ KS LN +KLLHKRKGIPHRSPLK
Sbjct: 182 EMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of MS009034 vs. ExPASy TrEMBL
Match: A0A6J1JTJ5 (uncharacterized protein LOC111487719 OS=Cucurbita maxima OX=3661 GN=LOC111487719 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110
Identity = 195/223 (87.44%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIH 61
           AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFC+DCG+AICRHCLISHCIH
Sbjct: 2   AGCKIYLKKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCIDCGIAICRHCLISHCIH 61

Query: 62  RRLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121
           RRLQICKYVYQYVVRV DLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG
Sbjct: 62  RRLQICKYVYQYVVRVPDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGG 121

Query: 122 TCEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTS 181
           TCEACGRYIQDLPNRFCSIACKVSM  VELN+QS R + S+ +  +++ KENHN E NTS
Sbjct: 122 TCEACGRYIQDLPNRFCSIACKVSMVSVELNNQSCRCITSKSDPNEISWKENHNVEPNTS 181

Query: 182 EIESSISMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSPLK 225
           E++SSISMAESTEEIKAW+ KS LN +KLLHKRKGIPHRSPLK
Sbjct: 182 EMKSSISMAESTEEIKAWQVKSGLNPRKLLHKRKGIPHRSPLK 224

[Close]

BLAST of MS009034 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-51
Identity = 106/222 (47.75%), Postives = 147/222 (66.22%), Query Frame = 0


Query: 9   KKRKAD--WLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHC----LISHCIHR 68
           +KR+++  W+ +LL S+FFG C++H+  RKNEKNVFC+DC V ICRHC      SH +HR
Sbjct: 5   EKRRSEEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHR 64

Query: 69  RLQICKYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGT 128
           RLQICKYVYQ V+R+ ++QN+ DC  IQTYKINGEKA+HL+ RPQ+KD++PSTK K G +
Sbjct: 65  RLQICKYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGAS 124

Query: 129 CEACGRYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTSE 188
           C  C RYIQD PN FCSI+CK+S        +  +F  S P L+    ++ H+ +  + E
Sbjct: 125 CVTCKRYIQDHPNLFCSISCKISTP-----SKKHKFCFS-PKLEQSVLEKEHSTQEGSLE 184

Query: 189 IESSI--SMAESTEEIKAWRTKSSLNAKKLLHKRKGIPHRSP 223
            + S   S+ + +E+ +   +  S      + KRKGI  RSP
Sbjct: 185 EKKSCTSSLTDVSEDSEVLLSDFSFRPLLRILKRKGISRRSP 220

[Close]

BLAST of MS009034 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-29
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 0


Query: 11  RKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIHRRLQICKYV 70
           +K  WL +L   KFF  C +H+  +KNE+NV CLDC  ++C HC+ SH  HR LQ+ +YV
Sbjct: 4   QKPAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYV 63

Query: 71  YQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYI 130
           Y  VVR+ DLQ  +DC N+Q Y IN  K V +  RPQ++  K +     G  C +C R +
Sbjct: 64  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGA-----GNYCTSCDRSL 123

Query: 131 QDLPNRFCSIACKVSMAPVELND 154
           Q+ P   CS+ CKV        D
Sbjct: 124 QE-PYIHCSLGCKVDFVMKRYRD 140

[Close]

BLAST of MS009034 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-28
Identity = 86/245 (35.10%), Postives = 123/245 (50.20%), Query Frame = 0


Query: 15  WLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIHRRLQICKYVYQYV 74
           WL  LL+ KFF +C+ H++++KNEKN+ C+DC + IC HCL SH  HR LQI +YVY+ V
Sbjct: 9   WLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYRDV 68

Query: 75  VRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQDLP 134
           +RV D    +DC  IQ Y  N  K V ++ RPQS+  + S     G  C  C R +Q  P
Sbjct: 69  LRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRGS-----GNICITCDRSLQS-P 128

Query: 135 NRFCSIACKVS---------------MAPVELNDQSSRFMAS---EPNLKDLTCKENHNP 194
             FC ++CK+S                  ++L D+ +    S   EP   + T  E+   
Sbjct: 129 YLFCCLSCKISDVIMRQRGLSGFLRVCNVLDLTDEVTTTTPSSTLEPTGSNRTSSESSGN 188

Query: 195 E------------TNTSEI----ESSISMA--ESTEEIKAWRTKSSLNAKKLLHKRKGIP 224
           E            T T+EI     SS+S      TE +    T++ +N    L++RK  P
Sbjct: 189 EGEDMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNTEAPVN---FLNRRKNPP 244

[Close]

BLAST of MS009034 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 79/231 (34.20%), Postives = 113/231 (48.92%), Query Frame = 0


Query: 12  KADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDCGVAICRHCLISHCIHRRLQICKYVY 71
           K  WL  L+   FF SC  H+  RK+EKNVFCL C +++C HCL SH  H  LQ+ +YVY
Sbjct: 18  KPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVY 77

Query: 72  QYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACGRYIQ 131
             VVR+ DL+  +DC  +Q Y ING K + L+ R QS+    S        C  C R +Q
Sbjct: 78  HDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSRAKVSS------NVCFTCDRILQ 137

Query: 132 DLPNRFCSIACKVSMAPVELNDQSSRF--------------MASEPNLKDLTCKENHNPE 191
           + P  FCS++CKV     + +D SS                M     L +++  E+    
Sbjct: 138 E-PFHFCSLSCKVDYLSYQGDDLSSILYRIDESDFTFEGLRMDGHDQLGEISTMEDGEDI 197

Query: 192 TNTSEIESSISMAESTEEIKAWRTKSSLN------AKKLLHKRKGIPHRSP 223
              S+     + +   E+ K+ + K   N         L ++RKG PHR+P
Sbjct: 198 LVISDESEQGNNSHKKEKKKSKKKKPESNYLPGMVLSSLGNRRKGAPHRAP 241

[Close]

BLAST of MS009034 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 112.1 bits (279), Expect = 5.9e-25
Identity = 73/220 (33.18%), Postives = 113/220 (51.36%), Query Frame = 0


Query: 9   KKRKADWLSSLLQSKFFGSCVHHQNNRKNEKNVFCLDC-GVAICRHCLISHCIHRRLQIC 68
           + R   WL  LL+ +FF  C  H ++ K+E N++CLDC    +C  CL  H  HR +QI 
Sbjct: 30  ENRWPPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTIQIR 89

Query: 69  KYVYQYVVRVHDLQNHLDCCNIQTYKINGEKAVHLSPRPQSKDSKPSTKLKFGGTCEACG 128
           +  Y  V+RV+++Q +LD   IQTY IN  K V L+ RPQ +  K  T      TC+ C 
Sbjct: 90  RSSYHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVT-----NTCKVCY 149

Query: 129 RYIQDLPNRFCSIACKVSMAPVELNDQSSRFMASEPNLKDLTCKENHNPETNTSEIESSI 188
           R + D   RFCS+ CK++         S  F     NL              T +  SSI
Sbjct: 150 RSLVDDSFRFCSLGCKIA-------GTSRGFEKGRENLL-----------METEDSSSSI 209

Query: 189 SMAESTEEIKAWRTK----SSLNAKKLLHKRKGIPHRSPL 224
           ++ ++   ++++       ++ +  +++ +RKGIPHRSP+
Sbjct: 210 AIGKNITNLQSFSPSTPPLTTSSNCRIVKRRKGIPHRSPM 226

The following BLAST results are available for this feature:

BLAST of MS009034 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146424.1	1.9e-126	99.55	uncharacterized protein LOC111015643 isoform X2 [Momordica charantia]	[more]
XP_022146423.1	7.3e-126	99.55	uncharacterized protein LOC111015643 isoform X1 [Momordica charantia]	[more]
XP_004142823.1	1.0e-111	88.84	uncharacterized protein LOC101210438 [Cucumis sativus] >KGN51458.1 hypothetical ...	[more]
XP_022963423.1	6.6e-111	87.89	uncharacterized protein LOC111463631 [Cucurbita moschata] >XP_023545157.1 unchar...	[more]
XP_022990994.1	5.6e-110	87.44	uncharacterized protein LOC111487719 [Cucurbita maxima]	[more]

BLAST of MS009034 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	4.3e-28	42.66	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of MS009034 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CY39	9.3e-127	99.55	uncharacterized protein LOC111015643 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CYJ3	3.5e-126	99.55	uncharacterized protein LOC111015643 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0KPD0	4.9e-112	88.84	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G550220 ...	[more]
A0A6J1HHR7	3.2e-111	87.89	uncharacterized protein LOC111463631 OS=Cucurbita moschata OX=3662 GN=LOC1114636...	[more]
A0A6J1JTJ5	2.7e-110	87.44	uncharacterized protein LOC111487719 OS=Cucurbita maxima OX=3661 GN=LOC111487719...	[more]

BLAST of MS009034 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01818.1	2.8e-51	47.75	PLATZ transcription factor family protein	[more]
AT2G12646.1	3.0e-29	42.66	PLATZ transcription factor family protein	[more]
AT3G60670.1	2.0e-28	35.10	PLATZ transcription factor family protein	[more]
AT1G31040.1	1.3e-27	34.20	PLATZ transcription factor family protein	[more]
AT4G17900.1	5.9e-25	33.18	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 68..144 e-value: 3.1E-24 score: 85.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..189
None	No IPR available	PANTHER	PTHR31065:SF41	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 2..223
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 2..223
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 28..66 score: 9.058046

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009034.1	MS009034.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding