MS008907 (gene) Bitter gourd (TR) v1

Overview
NameMS008907
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBidirectional sugar transporter SWEET
Locationscaffold490: 259876 .. 260112 (+)
RNA-Seq ExpressionMS008907
SyntenyMS008907
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAATTTGTTGAAATCGCTAAGAAAGAGGCAGTAGAAAAGTTCAAGCCAGATCCCTATATTACCACACTATTGAACTACATGTTATGGATTGGAATGTCCTTTGTTTATCACGATAGTCTTTTGACCGTCACCATTAATGGCCTTGGACTTTATTTTGAACTTGCGTATTTGGGCACTTTTCTCTTGTTTGTTGATATCAAAGGAAAAGTAAGTTGTTTCTTCTTTTGCTCCTTT

mRNA sequence

CCAAAATTTGTTGAAATCGCTAAGAAAGAGGCAGTAGAAAAGTTCAAGCCAGATCCCTATATTACCACACTATTGAACTACATGTTATGGATTGGAATGTCCTTTGTTTATCACGATAGTCTTTTGACCGTCACCATTAATGGCCTTGGACTTTATTTTGAACTTGCGTATTTGGGCACTTTTCTCTTGTTTGTTGATATCAAAGGAAAAGTAAGTTGTTTCTTCTTTTGCTCCTTT

Coding sequence (CDS)

CCAAAATTTGTTGAAATCGCTAAGAAAGAGGCAGTAGAAAAGTTCAAGCCAGATCCCTATATTACCACACTATTGAACTACATGTTATGGATTGGAATGTCCTTTGTTTATCACGATAGTCTTTTGACCGTCACCATTAATGGCCTTGGACTTTATTTTGAACTTGCGTATTTGGGCACTTTTCTCTTGTTTGTTGATATCAAAGGAAAAGTAAGTTGTTTCTTCTTTTGCTCCTTT

Protein sequence

PKFVEIAKKEAVEKFKPDPYITTLLNYMLWIGMSFVYHDSLLTVTINGLGLYFELAYLGTFLLFVDIKGKVSCFFFCSF
Homology
BLAST of MS008907 vs. NCBI nr
Match: XP_022150093.1 (bidirectional sugar transporter SWEET5-like [Momordica charantia])

HSP 1 Score: 87.4 bits (215), Expect = 5.9e-14
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 0

Query: 1   PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
           P F +I K ++VEKFKPDPYI T+LN M WI  GM FV+ DS+L VTING+GL  ELAYL
Sbjct: 28  PTFWKIIKNKSVEKFKPDPYIATVLNCMFWIFYGMPFVHSDSILVVTINGIGLVIELAYL 87

Query: 61  GTFLLFVDIKGKV 72
             F+LF D K +V
Sbjct: 88  AIFVLFADNKRQV 100

BLAST of MS008907 vs. NCBI nr
Match: XP_022150125.1 (bidirectional sugar transporter SWEET4-like [Momordica charantia] >XP_022159331.1 bidirectional sugar transporter SWEET4-like [Momordica charantia])

HSP 1 Score: 85.9 bits (211), Expect = 1.7e-13
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P F +I K++ VE+FKPDPYI T+LN M WI  GM FV+ DS+L VTING+GL  ELAYL
Sbjct: 28 PTFWKIIKRKTVEEFKPDPYIATVLNCMFWIFYGMPFVHPDSVLVVTINGIGLVIELAYL 87

Query: 61 GTFLLFVDIKGK 71
            F+ F D KG+
Sbjct: 88 AIFVFFADNKGR 99

BLAST of MS008907 vs. NCBI nr
Match: XP_022156697.1 (bidirectional sugar transporter SWEET4-like [Momordica charantia])

HSP 1 Score: 84.7 bits (208), Expect = 3.8e-13
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P F +I K + VE+FKPDPYI T+LN M WI  GM FV+ DS+L VTING+GL  ELAYL
Sbjct: 28 PTFYKIIKNKTVEEFKPDPYIATVLNCMFWIFYGMPFVHPDSVLVVTINGIGLVIELAYL 87

Query: 61 GTFLLFVDIKGK 71
            F+ + D KG+
Sbjct: 88 AIFVFYADNKGR 99

BLAST of MS008907 vs. NCBI nr
Match: XP_022159197.1 (bidirectional sugar transporter SWEET5-like [Momordica charantia])

HSP 1 Score: 84.3 bits (207), Expect = 5.0e-13
Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P F +I K + VE+FKPDPYI T+LN M W+  GM FV+ DS+L VTING+GL  ELAYL
Sbjct: 28 PTFYKIIKNKTVEEFKPDPYIATVLNCMFWVFYGMPFVHPDSVLVVTINGIGLVIELAYL 87

Query: 61 GTFLLFVDIKGK 71
            F+ + D KG+
Sbjct: 88 AIFVFYADNKGR 99

BLAST of MS008907 vs. NCBI nr
Match: XP_010111763.1 (bidirectional sugar transporter SWEET6b [Morus notabilis] >EXC31625.1 Bidirectional sugar transporter SWEET6b [Morus notabilis])

HSP 1 Score: 84.0 bits (206), Expect = 6.5e-13
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0

Query: 1   PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
           P F  I KK++VE+FKPDPY+ T+LN MLWI  GM FV+ DSLL VTIN +GL FEL YL
Sbjct: 29  PTFYRIIKKKSVEEFKPDPYLATVLNCMLWIFYGMPFVHPDSLLVVTINSVGLVFELIYL 88

Query: 61  GTFLLFVDIKGK 71
           G F ++    G+
Sbjct: 89  GIFFIYAKKDGR 100

BLAST of MS008907 vs. ExPASy Swiss-Prot
Match: A2YZ24 (Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica OX=39946 GN=SWEET7B PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 5.7e-12
Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P F  I K + V+ FK DPY+ TLLN MLW+  G+  V+ +S+L VTING+GL  E  YL
Sbjct: 28 PTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHPNSILVVTINGIGLIIEAVYL 87

Query: 61 GTFLLFVDIKGK 71
            F LF D K K
Sbjct: 88 TIFFLFSDKKNK 99

BLAST of MS008907 vs. ExPASy Swiss-Prot
Match: Q0J349 (Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET7B PE=3 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 5.7e-12
Identity = 37/72 (51.39%), Postives = 46/72 (63.89%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P F  I K + V+ FK DPY+ TLLN MLW+  G+  V+ +S+L VTING+GL  E  YL
Sbjct: 28 PTFYRIIKNKDVQDFKADPYLATLLNCMLWVFYGLPIVHPNSILVVTINGIGLVIEAVYL 87

Query: 61 GTFLLFVDIKGK 71
            F LF D K K
Sbjct: 88 TIFFLFSDKKNK 99

BLAST of MS008907 vs. ExPASy Swiss-Prot
Match: Q944M5 (Bidirectional sugar transporter SWEET4 OS=Arabidopsis thaliana OX=3702 GN=SWEET4 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-11
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 0

Query: 1   PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
           P F+ I KK+ VE++K DPY+ T+LN  LW+  G+  V  DSLL +TING GL  EL YL
Sbjct: 28  PTFITIYKKKKVEEYKADPYLATVLNCALWVFYGLPMVQPDSLLVITINGTGLAIELVYL 87

Query: 61  GTFLLFVDIKGKV 72
             F  F     KV
Sbjct: 88  AIFFFFSPTSRKV 100

BLAST of MS008907 vs. ExPASy Swiss-Prot
Match: Q9FM10 (Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana OX=3702 GN=SWEET5 PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-11
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLW--IGMSFVYHDSLLTVTINGLGLYFELAYL 60
          P  V+I K ++V +FKPDPY+ T+LN M+W   G+ FV  DSLL +TING GL+ EL Y+
Sbjct: 28 PTMVKIWKMKSVSEFKPDPYVATVLNCMMWTFYGLPFVQPDSLLVITINGTGLFMELVYV 87

Query: 61 GTFLLF 65
            F +F
Sbjct: 88 TIFFVF 93

BLAST of MS008907 vs. ExPASy Swiss-Prot
Match: Q6L568 (Bidirectional sugar transporter SWEET5 OS=Oryza sativa subsp. japonica OX=39947 GN=SWEET5 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.9e-11
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P FV I KK+ VE+F PDPY+ T LN  LW+  G+ F++ +S+L VTING GL  E+AYL
Sbjct: 29 PTFVTIVKKKDVEEFVPDPYLATFLNCALWVFYGLPFIHPNSILVVTINGTGLLIEIAYL 88

Query: 61 GTFLLF 65
            +  +
Sbjct: 89 AIYFAY 94

BLAST of MS008907 vs. ExPASy TrEMBL
Match: A0A6J1D8J1 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111018353 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-14
Identity = 45/73 (61.64%), Postives = 54/73 (73.97%), Query Frame = 0

Query: 1   PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
           P F +I K ++VEKFKPDPYI T+LN M WI  GM FV+ DS+L VTING+GL  ELAYL
Sbjct: 28  PTFWKIIKNKSVEKFKPDPYIATVLNCMFWIFYGMPFVHSDSILVVTINGIGLVIELAYL 87

Query: 61  GTFLLFVDIKGKV 72
             F+LF D K +V
Sbjct: 88  AIFVLFADNKRQV 100

BLAST of MS008907 vs. ExPASy TrEMBL
Match: A0A6J1D7L9 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111018380 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 8.3e-14
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P F +I K++ VE+FKPDPYI T+LN M WI  GM FV+ DS+L VTING+GL  ELAYL
Sbjct: 28 PTFWKIIKRKTVEEFKPDPYIATVLNCMFWIFYGMPFVHPDSVLVVTINGIGLVIELAYL 87

Query: 61 GTFLLFVDIKGK 71
            F+ F D KG+
Sbjct: 88 AIFVFFADNKGR 99

BLAST of MS008907 vs. ExPASy TrEMBL
Match: A0A6J1DSM8 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111023542 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.9e-13
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P F +I K + VE+FKPDPYI T+LN M WI  GM FV+ DS+L VTING+GL  ELAYL
Sbjct: 28 PTFYKIIKNKTVEEFKPDPYIATVLNCMFWIFYGMPFVHPDSVLVVTINGIGLVIELAYL 87

Query: 61 GTFLLFVDIKGK 71
            F+ + D KG+
Sbjct: 88 AIFVFYADNKGR 99

BLAST of MS008907 vs. ExPASy TrEMBL
Match: A0A6J1DZ58 (Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC111025616 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.4e-13
Identity = 41/72 (56.94%), Postives = 52/72 (72.22%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P F +I K + VE+FKPDPYI T+LN M W+  GM FV+ DS+L VTING+GL  ELAYL
Sbjct: 28 PTFYKIIKNKTVEEFKPDPYIATVLNCMFWVFYGMPFVHPDSVLVVTINGIGLVIELAYL 87

Query: 61 GTFLLFVDIKGK 71
            F+ + D KG+
Sbjct: 88 AIFVFYADNKGR 99

BLAST of MS008907 vs. ExPASy TrEMBL
Match: W9SX85 (Bidirectional sugar transporter SWEET OS=Morus notabilis OX=981085 GN=L484_008422 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 3.2e-13
Identity = 42/72 (58.33%), Postives = 52/72 (72.22%), Query Frame = 0

Query: 1   PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
           P F  I KK++VE+FKPDPY+ T+LN MLWI  GM FV+ DSLL VTIN +GL FEL YL
Sbjct: 29  PTFYRIIKKKSVEEFKPDPYLATVLNCMLWIFYGMPFVHPDSLLVVTINSVGLVFELIYL 88

Query: 61  GTFLLFVDIKGK 71
           G F ++    G+
Sbjct: 89  GIFFIYAKKDGR 100

BLAST of MS008907 vs. TAIR 10
Match: AT3G28007.1 (Nodulin MtN3 family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-12
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 0

Query: 1   PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
           P F+ I KK+ VE++K DPY+ T+LN  LW+  G+  V  DSLL +TING GL  EL YL
Sbjct: 28  PTFITIYKKKKVEEYKADPYLATVLNCALWVFYGLPMVQPDSLLVITINGTGLAIELVYL 87

Query: 61  GTFLLFVDIKGKV 72
             F  F     KV
Sbjct: 88  AIFFFFSPTSRKV 100

BLAST of MS008907 vs. TAIR 10
Match: AT5G62850.1 (Nodulin MtN3 family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.6e-12
Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLW--IGMSFVYHDSLLTVTINGLGLYFELAYL 60
          P  V+I K ++V +FKPDPY+ T+LN M+W   G+ FV  DSLL +TING GL+ EL Y+
Sbjct: 28 PTMVKIWKMKSVSEFKPDPYVATVLNCMMWTFYGLPFVQPDSLLVITINGTGLFMELVYV 87

Query: 61 GTFLLF 65
            F +F
Sbjct: 88 TIFFVF 93

BLAST of MS008907 vs. TAIR 10
Match: AT4G10850.1 (Nodulin MtN3 family protein )

HSP 1 Score: 61.6 bits (148), Expect = 3.2e-10
Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 1  PKFVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYL 60
          P FV I KK++VE++ P PY+ TL+N ++W+  G+  V+ DS L +TING G+  E+ +L
Sbjct: 30 PTFVRIVKKKSVEEYSPIPYLATLINCLVWVLYGLPTVHPDSTLVITINGTGILIEIVFL 89

Query: 61 GTFLLF 65
            F ++
Sbjct: 90 TIFFVY 95

BLAST of MS008907 vs. TAIR 10
Match: AT5G40260.1 (Nodulin MtN3 family protein )

HSP 1 Score: 61.2 bits (147), Expect = 4.2e-10
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 3  FVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYLGT 62
          F  I KK++VE+F   PY+ T++N MLW+  G+  V+ DS+L  TING+GL  EL Y+G 
Sbjct: 30 FWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGV 89

Query: 63 FLLF 65
          +L++
Sbjct: 90 YLMY 93

BLAST of MS008907 vs. TAIR 10
Match: AT5G40260.2 (Nodulin MtN3 family protein )

HSP 1 Score: 61.2 bits (147), Expect = 4.2e-10
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 0

Query: 3  FVEIAKKEAVEKFKPDPYITTLLNYMLWI--GMSFVYHDSLLTVTINGLGLYFELAYLGT 62
          F  I KK++VE+F   PY+ T++N MLW+  G+  V+ DS+L  TING+GL  EL Y+G 
Sbjct: 30 FWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGV 89

Query: 63 FLLF 65
          +L++
Sbjct: 90 YLMY 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150093.15.9e-1461.64bidirectional sugar transporter SWEET5-like [Momordica charantia][more]
XP_022150125.11.7e-1359.72bidirectional sugar transporter SWEET4-like [Momordica charantia] >XP_022159331.... [more]
XP_022156697.13.8e-1358.33bidirectional sugar transporter SWEET4-like [Momordica charantia][more]
XP_022159197.15.0e-1356.94bidirectional sugar transporter SWEET5-like [Momordica charantia][more]
XP_010111763.16.5e-1358.33bidirectional sugar transporter SWEET6b [Morus notabilis] >EXC31625.1 Bidirectio... [more]
Match NameE-valueIdentityDescription
A2YZ245.7e-1251.39Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. indica OX=39946 G... [more]
Q0J3495.7e-1251.39Bidirectional sugar transporter SWEET7b OS=Oryza sativa subsp. japonica OX=39947... [more]
Q944M52.2e-1149.32Bidirectional sugar transporter SWEET4 OS=Arabidopsis thaliana OX=3702 GN=SWEET4... [more]
Q9FM102.2e-1151.52Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana OX=3702 GN=SWEET5... [more]
Q6L5684.9e-1150.00Bidirectional sugar transporter SWEET5 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Match NameE-valueIdentityDescription
A0A6J1D8J12.9e-1461.64Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1D7L98.3e-1459.72Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC11101... [more]
A0A6J1DSM81.9e-1358.33Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC11102... [more]
A0A6J1DZ582.4e-1356.94Bidirectional sugar transporter SWEET OS=Momordica charantia OX=3673 GN=LOC11102... [more]
W9SX853.2e-1358.33Bidirectional sugar transporter SWEET OS=Morus notabilis OX=981085 GN=L484_00842... [more]
Match NameE-valueIdentityDescription
AT3G28007.11.6e-1249.32Nodulin MtN3 family protein [more]
AT5G62850.11.6e-1251.52Nodulin MtN3 family protein [more]
AT4G10850.13.2e-1042.42Nodulin MtN3 family protein [more]
AT5G40260.14.2e-1046.88Nodulin MtN3 family protein [more]
AT5G40260.24.2e-1046.88Nodulin MtN3 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004316SWEET sugar transporterPFAMPF03083MtN3_slvcoord: 2..65
e-value: 8.6E-9
score: 35.3
NoneNo IPR availableGENE3D1.20.1280.290coord: 1..66
e-value: 8.5E-9
score: 37.6
NoneNo IPR availablePANTHERPTHR10791:SF159BIDIRECTIONAL SUGAR TRANSPORTER SWEET5coord: 1..69
NoneNo IPR availablePANTHERPTHR10791RAG1-ACTIVATING PROTEIN 1coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS008907.1MS008907.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane