MS008904 (gene) Bitter gourd (TR) v1

Overview
NameMS008904
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhomeobox-leucine zipper protein HAT5
Locationscaffold490: 159055 .. 159989 (-)
RNA-Seq ExpressionMS008904
SyntenyMS008904
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGGAGGGAGAAGAATGATGAGCATGAGCATGCAGGAAAGCCCAAGGGGGCGGCCGTTTTTCAGATCACCCGACGATCTTTACGACGACGAATATTACGACGAGCTCTACCCCGAAAAGAAGCGCCGCCTTAGTCACGACCAGGTTTGTGACATTTGCCTTTTATGCTGCCATTTTCACCAGTTCTCTCTTTCAAGTTGTGGAAGAACTTTTTTTAAGGTTCAAATGCTGGAGAAGAGCTTTGAGGAAGAGAACAAACTGGAGCCAGAGCGGAAGACTCAACTGGCCAAGAAACTGGGGCTGCAGCCAAGGCAGGTCGCCGTGTGGTACCAAAACCGCCGTGCTCGGTGGAAGACGAAGCAGCTCGAAAGGGACTACGATCTTCTTAAGGCTTCGTATGATTTGCTTCTCTCTAACTATGACTCCATTGTCAAAGAAAATGCAGTTCTTAAATCTGAGGTGAGTTTCATTCCCATTTTAAAGTATTAAATAATGTATAAATTCATATTTTTGAAAGTTCAGAAACTAAGTCTGAGAATTAGACTTATCAAATTCATTATATGCATAATAGACCATAGTATTTTCAGGTGGCTTCCCTAGCAGAGAAATTTCTAAACAAAGAGCTAACCGGAGAAGCGTCGGTTCCACATATAACATCCGAACCTCTTCTAGCAAACATTGTGCACGTCTCCTCCCCACGCTCTGGCAGAAAGGCCGAAGACCGTCTGAGTTCAGGGAGCAACAGCAGTGCAGTGGTCGACGACAATTGCCCACAACTCATCGACAGTGGTGACTCTTACTTCCCCAGCAACGAATATCTGCAAATAGAGAATGACGACAAGAGCGACAACGGCTACAATTTCTTCTCCGATATGTTTGCAGCAACAAACCAACAGAATCAGGAGGGTGGTCATCCAGCTTGGTGGGCATGGCCA

mRNA sequence

CAAGGAGGGAGAAGAATGATGAGCATGAGCATGCAGGAAAGCCCAAGGGGGCGGCCGTTTTTCAGATCACCCGACGATCTTTACGACGACGAATATTACGACGAGCTCTACCCCGAAAAGAAGCGCCGCCTTAGTCACGACCAGGTTTGTGACATTTGCCTTTTATGCTGCCATTTTCACCAGTTCTCTCTTTCAAGTTGTGGAAGAACTTTTTTTAAGGTTCAAATGCTGGAGAAGAGCTTTGAGGAAGAGAACAAACTGGAGCCAGAGCGGAAGACTCAACTGGCCAAGAAACTGGGGCTGCAGCCAAGGCAGGTCGCCGTGTGGTACCAAAACCGCCGTGCTCGGTGGAAGACGAAGCAGCTCGAAAGGGACTACGATCTTCTTAAGGCTTCGTATGATTTGCTTCTCTCTAACTATGACTCCATTGTCAAAGAAAATGCAGTTCTTAAATCTGAGGTGGCTTCCCTAGCAGAGAAATTTCTAAACAAAGAGCTAACCGGAGAAGCGTCGGTTCCACATATAACATCCGAACCTCTTCTAGCAAACATTGTGCACGTCTCCTCCCCACGCTCTGGCAGAAAGGCCGAAGACCGTCTGAGTTCAGGGAGCAACAGCAGTGCAGTGGTCGACGACAATTGCCCACAACTCATCGACAGTGGTGACTCTTACTTCCCCAGCAACGAATATCTGCAAATAGAGAATGACGACAAGAGCGACAACGGCTACAATTTCTTCTCCGATATGTTTGCAGCAACAAACCAACAGAATCAGGAGGGTGGTCATCCAGCTTGGTGGGCATGGCCA

Coding sequence (CDS)

CAAGGAGGGAGAAGAATGATGAGCATGAGCATGCAGGAAAGCCCAAGGGGGCGGCCGTTTTTCAGATCACCCGACGATCTTTACGACGACGAATATTACGACGAGCTCTACCCCGAAAAGAAGCGCCGCCTTAGTCACGACCAGGTTTGTGACATTTGCCTTTTATGCTGCCATTTTCACCAGTTCTCTCTTTCAAGTTGTGGAAGAACTTTTTTTAAGGTTCAAATGCTGGAGAAGAGCTTTGAGGAAGAGAACAAACTGGAGCCAGAGCGGAAGACTCAACTGGCCAAGAAACTGGGGCTGCAGCCAAGGCAGGTCGCCGTGTGGTACCAAAACCGCCGTGCTCGGTGGAAGACGAAGCAGCTCGAAAGGGACTACGATCTTCTTAAGGCTTCGTATGATTTGCTTCTCTCTAACTATGACTCCATTGTCAAAGAAAATGCAGTTCTTAAATCTGAGGTGGCTTCCCTAGCAGAGAAATTTCTAAACAAAGAGCTAACCGGAGAAGCGTCGGTTCCACATATAACATCCGAACCTCTTCTAGCAAACATTGTGCACGTCTCCTCCCCACGCTCTGGCAGAAAGGCCGAAGACCGTCTGAGTTCAGGGAGCAACAGCAGTGCAGTGGTCGACGACAATTGCCCACAACTCATCGACAGTGGTGACTCTTACTTCCCCAGCAACGAATATCTGCAAATAGAGAATGACGACAAGAGCGACAACGGCTACAATTTCTTCTCCGATATGTTTGCAGCAACAAACCAACAGAATCAGGAGGGTGGTCATCCAGCTTGGTGGGCATGGCCA

Protein sequence

QGGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQFSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLLANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDNGYNFFSDMFAATNQQNQEGGHPAWWAWP
Homology
[Close]
BLAST of MS008904 vs. NCBI nr
Match: XP_022150086.1 (homeobox-leucine zipper protein HAT5 isoform X2 [Momordica charantia])

HSP 1 Score: 532.3 bits (1370), Expect = 2.4e-147
Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0 

Query: 2   GGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 61
           GGRRMMSMSMQESP+GRPFFRSP DLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ
Sbjct: 23  GGRRMMSMSMQESPKGRPFFRSPHDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 82

Query: 62  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQ 121
           FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK KQ
Sbjct: 83  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQ 142

Query: 122 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL 181
           LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL
Sbjct: 143 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL 202

Query: 182 ANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN 241
           ANIVHVSSPRSGRKAEDRLSSGSNSSA VDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN
Sbjct: 203 ANIVHVSSPRSGRKAEDRLSSGSNSSAPVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN 262

Query: 242 GYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           GYNFFSDMFAATNQQNQEGGHPAWWAWP
Sbjct: 263 GYNFFSDMFAATNQQNQEGGHPAWWAWP 290

[Close]
BLAST of MS008904 vs. NCBI nr
Match: XP_022150085.1 (homeobox-leucine zipper protein HAT5 isoform X1 [Momordica charantia])

HSP 1 Score: 526.9 bits (1356), Expect = 9.9e-146
Identity = 264/271 (97.42%), Postives = 265/271 (97.79%), Query Frame = 0 

Query: 2   GGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 61
           GGRRMMSMSMQESP+GRPFFRSP DLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ
Sbjct: 23  GGRRMMSMSMQESPKGRPFFRSPHDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 82

Query: 62  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQ 121
           FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK KQ
Sbjct: 83  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQ 142

Query: 122 LERDYDLLKASYDLLLSNYDSIVKENAVLKSE---VASLAEKFLNKELTGEASVPHITSE 181
           LERDYDLLKASYDLLLSNYDSIVKENAVLKSE   VASLAEKFLNKELTGEASVPHITSE
Sbjct: 143 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEYFQVASLAEKFLNKELTGEASVPHITSE 202

Query: 182 PLLANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDK 241
           PLLANIVHVSSPRSGRKAEDRLSSGSNSSA VDDNCPQLIDSGDSYFPSNEYLQIENDDK
Sbjct: 203 PLLANIVHVSSPRSGRKAEDRLSSGSNSSAPVDDNCPQLIDSGDSYFPSNEYLQIENDDK 262

Query: 242 SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP
Sbjct: 263 SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 293

[Close]
BLAST of MS008904 vs. NCBI nr
Match: XP_022150089.1 (homeobox-leucine zipper protein HAT5 isoform X4 [Momordica charantia])

HSP 1 Score: 461.8 bits (1187), Expect = 3.9e-126
Identity = 239/268 (89.18%), Postives = 240/268 (89.55%), Query Frame = 0 

Query: 2   GGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 61
           GGRRMMSMSMQESP+GRPFFRSP DLYDDEYYDELYPEKKRRLSHDQ             
Sbjct: 23  GGRRMMSMSMQESPKGRPFFRSPHDLYDDEYYDELYPEKKRRLSHDQ------------- 82

Query: 62  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQ 121
                       VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK KQ
Sbjct: 83  ------------VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQ 142

Query: 122 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL 181
           LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL
Sbjct: 143 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL 202

Query: 182 ANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN 241
           ANIVHVSSPRSGRKAEDRLSSGSNSSA VDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN
Sbjct: 203 ANIVHVSSPRSGRKAEDRLSSGSNSSAPVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN 262

Query: 242 GYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           GYNFFSDMFAATNQQNQEGGHPAWWAWP
Sbjct: 263 GYNFFSDMFAATNQQNQEGGHPAWWAWP 265

[Close]
BLAST of MS008904 vs. NCBI nr
Match: XP_022150087.1 (homeobox-leucine zipper protein HAT5 isoform X3 [Momordica charantia])

HSP 1 Score: 456.4 bits (1173), Expect = 1.6e-124
Identity = 239/271 (88.19%), Postives = 240/271 (88.56%), Query Frame = 0 

Query: 2   GGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 61
           GGRRMMSMSMQESP+GRPFFRSP DLYDDEYYDELYPEKKRRLSHDQ             
Sbjct: 23  GGRRMMSMSMQESPKGRPFFRSPHDLYDDEYYDELYPEKKRRLSHDQ------------- 82

Query: 62  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQ 121
                       VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK KQ
Sbjct: 83  ------------VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQ 142

Query: 122 LERDYDLLKASYDLLLSNYDSIVKENAVLKSE---VASLAEKFLNKELTGEASVPHITSE 181
           LERDYDLLKASYDLLLSNYDSIVKENAVLKSE   VASLAEKFLNKELTGEASVPHITSE
Sbjct: 143 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEYFQVASLAEKFLNKELTGEASVPHITSE 202

Query: 182 PLLANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDK 241
           PLLANIVHVSSPRSGRKAEDRLSSGSNSSA VDDNCPQLIDSGDSYFPSNEYLQIENDDK
Sbjct: 203 PLLANIVHVSSPRSGRKAEDRLSSGSNSSAPVDDNCPQLIDSGDSYFPSNEYLQIENDDK 262

Query: 242 SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP
Sbjct: 263 SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 268

[Close]
BLAST of MS008904 vs. NCBI nr
Match: XP_038903320.1 (homeobox-leucine zipper protein HAT5-like [Benincasa hispida])

HSP 1 Score: 387.1 bits (993), Expect = 1.2e-103
Identity = 207/276 (75.00%), Postives = 225/276 (81.52%), Query Frame = 0 

Query: 1   QGGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFH 60
           +GGR MMSM+M  SP+GRPFFRS DDLYDDEYYDELYPEKKRRL+H+Q            
Sbjct: 29  RGGRTMMSMNMNVSPKGRPFFRSLDDLYDDEYYDELYPEKKRRLTHEQ------------ 88

Query: 61  QFSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTK 120
                        VQMLEK+FEEENKLEPERK+QLAKKLGLQPRQVAVW+QNRRARWKTK
Sbjct: 89  -------------VQMLEKNFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKTK 148

Query: 121 QLERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELT-GEASVPHITSEP 180
           QLERDYD+LKASYDLLLSNYDSIVKENAVLKSEVASL EK L KEL  GEA +P++TSE 
Sbjct: 149 QLERDYDVLKASYDLLLSNYDSIVKENAVLKSEVASLTEKCLAKELDGGEAPIPYVTSEL 208

Query: 181 LLANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEY------LQI 240
           LLA++ HVS+P SGRKAEDRLSSGS+SSAVVDDNCPQLIDSGDSYFPSNEY      LQI
Sbjct: 209 LLADVAHVSTPHSGRKAEDRLSSGSDSSAVVDDNCPQLIDSGDSYFPSNEYPQLPSGLQI 268

Query: 241 ENDDKSDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           E+DD +DN    FSDMFAATNQQNQE G PAWWAWP
Sbjct: 269 EHDDTNDNSNYLFSDMFAATNQQNQEEGPPAWWAWP 279

[Close]
BLAST of MS008904 vs. ExPASy Swiss-Prot
Match: Q02283 (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-62
Identity = 144/272 (52.94%), Postives = 177/272 (65.07%), Query Frame = 0 

Query: 1   QGGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFH 60
           QGG     M+M+E+ + RPFF SP+DLYDD++YD+  PEKKRRL+ +Q            
Sbjct: 29  QGGGARSMMNMEETSKRRPFFSSPEDLYDDDFYDDQLPEKKRRLTTEQ------------ 88

Query: 61  QFSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTK 120
                        V +LEKSFE ENKLEPERKTQLAKKLGLQPRQVAVW+QNRRARWKTK
Sbjct: 89  -------------VHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 148

Query: 121 QLERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPL 180
           QLERDYDLLK++YD LLSNYDSIV +N  L+SEV SL EK   K+ T     P    EP 
Sbjct: 149 QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETAN-EPPGQVPEPN 208

Query: 181 LANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQ-IENDDKS 240
             + V++++  +  K EDRLSSGS  SAV+DD+ PQL+DS DSYFPS   +Q   N    
Sbjct: 209 QLDPVYINA--AAIKTEDRLSSGSVGSAVLDDDAPQLLDSCDSYFPSIVPIQDNSNASDH 268

Query: 241 DNGYNFFSDMFAATNQQNQE--GGHPAWWAWP 270
           DN  + F+D+F  T   + +  G   A+W WP
Sbjct: 269 DNDRSCFADVFVPTTSPSHDHHGESLAFWGWP 272

[Close]
BLAST of MS008904 vs. ExPASy Swiss-Prot
Match: A2X980 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-45
Identity = 133/324 (41.05%), Postives = 173/324 (53.40%), Query Frame = 0 

Query: 9   MSMQESPRG--RPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQFSLSS 68
           + M+E  RG  RPFF +PD+L ++EYYDE  PEKKRRL+ +Q                  
Sbjct: 46  LGMEEGGRGVKRPFFTTPDELLEEEYYDEQLPEKKRRLTPEQ------------------ 105

Query: 69  CGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDY 128
                  V +LE+SFEEENKLEPERKT+LA+KLGLQPRQVAVW+QNRRARWKTKQLERD+
Sbjct: 106 -------VHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDF 165

Query: 129 DLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL--ANI 188
           D LKAS+D L +++D+++++N  L S+V SL EK   KE T E S       P L  A  
Sbjct: 166 DRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPAAAD 225

Query: 189 VHVSSPRSGR------------------KAEDRLSSGSNSSAVVDDNCPQLIDSG----- 248
           V V+ P +                    KAEDRLS+GS  SAVVD +   ++  G     
Sbjct: 226 VKVAVPDAEEPALEEAAAAFEEQQEQQVKAEDRLSTGSGGSAVVDTDAQLVVGCGRQHLA 285

Query: 249 ------DSYFP-SNEY--------------LQIENDD--KSDNGYNFFSD----MFAATN 269
                 +SYFP  +EY              +Q E DD   SD G ++++D    +FA   
Sbjct: 286 AVDSSVESYFPGGDEYHDCVMGPMDHAAGGIQSEEDDGAGSDEGCSYYADDAGVLFADHG 344

[Close]
BLAST of MS008904 vs. ExPASy Swiss-Prot
Match: Q6YWR4 (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX16 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-45
Identity = 133/324 (41.05%), Postives = 173/324 (53.40%), Query Frame = 0 

Query: 9   MSMQESPRG--RPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQFSLSS 68
           + M+E  RG  RPFF +PD+L ++EYYDE  PEKKRRL+ +Q                  
Sbjct: 44  LGMEEGGRGVKRPFFTTPDELLEEEYYDEQLPEKKRRLTPEQ------------------ 103

Query: 69  CGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDY 128
                  V +LE+SFEEENKLEPERKT+LA+KLGLQPRQVAVW+QNRRARWKTKQLERD+
Sbjct: 104 -------VHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDF 163

Query: 129 DLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL--ANI 188
           D LKAS+D L +++D+++++N  L S+V SL EK   KE T E S       P L  A  
Sbjct: 164 DRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEKETTTEGSAGAAVDVPGLPAAAD 223

Query: 189 VHVSSPRSGR------------------KAEDRLSSGSNSSAVVDDNCPQLIDSG----- 248
           V V+ P +                    KAEDRLS+GS  SAVVD +   ++  G     
Sbjct: 224 VKVAVPDAEEPALEEAAAAFEEQQEQQVKAEDRLSTGSGGSAVVDTDAQLVVGCGRQHLA 283

Query: 249 ------DSYFP-SNEY--------------LQIENDD--KSDNGYNFFSD----MFAATN 269
                 +SYFP  +EY              +Q E DD   SD G ++++D    +FA   
Sbjct: 284 AVDSSVESYFPGGDEYHDCVMGPMDHAAGGIQSEEDDGAGSDEGCSYYADDAGVLFADHG 342

[Close]
BLAST of MS008904 vs. ExPASy Swiss-Prot
Match: Q9XH36 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=HOX5 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.7e-35
Identity = 78/148 (52.70%), Postives = 104/148 (70.27%), Query Frame = 0 

Query: 18  RPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQFSLSSCGRTFFKVQML 77
           RPFF + ++L ++EYYDE  PEKKRRL+ +Q                         VQML
Sbjct: 64  RPFFTTHEELLEEEYYDEQAPEKKRRLTAEQ-------------------------VQML 123

Query: 78  EKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDYDLLKASYDLLL 137
           E+SFEEENKLEPERKT+LA++LG+ PRQVAVW+QNRRARWKTKQLE D+D LKA+YD L 
Sbjct: 124 ERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALA 183

Query: 138 SNYDSIVKENAVLKSEVASLAEKFLNKE 166
           +++ +++ +N  L+++V SL EK  +KE
Sbjct: 184 ADHHALLSDNDRLRAQVISLTEKLQDKE 186

[Close]
BLAST of MS008904 vs. ExPASy Swiss-Prot
Match: Q6ZA74 (Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX5 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.7e-35
Identity = 78/148 (52.70%), Postives = 104/148 (70.27%), Query Frame = 0 

Query: 18  RPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQFSLSSCGRTFFKVQML 77
           RPFF + ++L ++EYYDE  PEKKRRL+ +Q                         VQML
Sbjct: 64  RPFFTTHEELLEEEYYDEQAPEKKRRLTAEQ-------------------------VQML 123

Query: 78  EKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDYDLLKASYDLLL 137
           E+SFEEENKLEPERKT+LA++LG+ PRQVAVW+QNRRARWKTKQLE D+D LKA+YD L 
Sbjct: 124 ERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLEHDFDRLKAAYDALA 183

Query: 138 SNYDSIVKENAVLKSEVASLAEKFLNKE 166
           +++ +++ +N  L+++V SL EK  +KE
Sbjct: 184 ADHHALLSDNDRLRAQVISLTEKLQDKE 186

[Close]
BLAST of MS008904 vs. ExPASy TrEMBL
Match: A0A6J1DAE2 (homeobox-leucine zipper protein HAT5 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018349 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.1e-147
Identity = 264/268 (98.51%), Postives = 265/268 (98.88%), Query Frame = 0 

Query: 2   GGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 61
           GGRRMMSMSMQESP+GRPFFRSP DLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ
Sbjct: 23  GGRRMMSMSMQESPKGRPFFRSPHDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 82

Query: 62  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQ 121
           FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK KQ
Sbjct: 83  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQ 142

Query: 122 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL 181
           LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL
Sbjct: 143 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL 202

Query: 182 ANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN 241
           ANIVHVSSPRSGRKAEDRLSSGSNSSA VDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN
Sbjct: 203 ANIVHVSSPRSGRKAEDRLSSGSNSSAPVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN 262

Query: 242 GYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           GYNFFSDMFAATNQQNQEGGHPAWWAWP
Sbjct: 263 GYNFFSDMFAATNQQNQEGGHPAWWAWP 290

[Close]
BLAST of MS008904 vs. ExPASy TrEMBL
Match: A0A6J1D7I2 (homeobox-leucine zipper protein HAT5 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018349 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.8e-146
Identity = 264/271 (97.42%), Postives = 265/271 (97.79%), Query Frame = 0 

Query: 2   GGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 61
           GGRRMMSMSMQESP+GRPFFRSP DLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ
Sbjct: 23  GGRRMMSMSMQESPKGRPFFRSPHDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 82

Query: 62  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQ 121
           FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK KQ
Sbjct: 83  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQ 142

Query: 122 LERDYDLLKASYDLLLSNYDSIVKENAVLKSE---VASLAEKFLNKELTGEASVPHITSE 181
           LERDYDLLKASYDLLLSNYDSIVKENAVLKSE   VASLAEKFLNKELTGEASVPHITSE
Sbjct: 143 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEYFQVASLAEKFLNKELTGEASVPHITSE 202

Query: 182 PLLANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDK 241
           PLLANIVHVSSPRSGRKAEDRLSSGSNSSA VDDNCPQLIDSGDSYFPSNEYLQIENDDK
Sbjct: 203 PLLANIVHVSSPRSGRKAEDRLSSGSNSSAPVDDNCPQLIDSGDSYFPSNEYLQIENDDK 262

Query: 242 SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP
Sbjct: 263 SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 293

[Close]
BLAST of MS008904 vs. ExPASy TrEMBL
Match: A0A6J1D8Z8 (homeobox-leucine zipper protein HAT5 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111018349 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.9e-126
Identity = 239/268 (89.18%), Postives = 240/268 (89.55%), Query Frame = 0 

Query: 2   GGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 61
           GGRRMMSMSMQESP+GRPFFRSP DLYDDEYYDELYPEKKRRLSHDQ             
Sbjct: 23  GGRRMMSMSMQESPKGRPFFRSPHDLYDDEYYDELYPEKKRRLSHDQ------------- 82

Query: 62  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQ 121
                       VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK KQ
Sbjct: 83  ------------VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQ 142

Query: 122 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL 181
           LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL
Sbjct: 143 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLL 202

Query: 182 ANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN 241
           ANIVHVSSPRSGRKAEDRLSSGSNSSA VDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN
Sbjct: 203 ANIVHVSSPRSGRKAEDRLSSGSNSSAPVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDN 262

Query: 242 GYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           GYNFFSDMFAATNQQNQEGGHPAWWAWP
Sbjct: 263 GYNFFSDMFAATNQQNQEGGHPAWWAWP 265

[Close]
BLAST of MS008904 vs. ExPASy TrEMBL
Match: A0A6J1D9R6 (homeobox-leucine zipper protein HAT5 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111018349 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 8.0e-125
Identity = 239/271 (88.19%), Postives = 240/271 (88.56%), Query Frame = 0 

Query: 2   GGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQ 61
           GGRRMMSMSMQESP+GRPFFRSP DLYDDEYYDELYPEKKRRLSHDQ             
Sbjct: 23  GGRRMMSMSMQESPKGRPFFRSPHDLYDDEYYDELYPEKKRRLSHDQ------------- 82

Query: 62  FSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQ 121
                       VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK KQ
Sbjct: 83  ------------VQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKMKQ 142

Query: 122 LERDYDLLKASYDLLLSNYDSIVKENAVLKSE---VASLAEKFLNKELTGEASVPHITSE 181
           LERDYDLLKASYDLLLSNYDSIVKENAVLKSE   VASLAEKFLNKELTGEASVPHITSE
Sbjct: 143 LERDYDLLKASYDLLLSNYDSIVKENAVLKSEYFQVASLAEKFLNKELTGEASVPHITSE 202

Query: 182 PLLANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDK 241
           PLLANIVHVSSPRSGRKAEDRLSSGSNSSA VDDNCPQLIDSGDSYFPSNEYLQIENDDK
Sbjct: 203 PLLANIVHVSSPRSGRKAEDRLSSGSNSSAPVDDNCPQLIDSGDSYFPSNEYLQIENDDK 262

Query: 242 SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 270
           SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP
Sbjct: 263 SDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 268

[Close]
BLAST of MS008904 vs. ExPASy TrEMBL
Match: A0A6J1EJJ4 (homeobox-leucine zipper protein HAT5 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435068 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 8.9e-100
Identity = 205/284 (72.18%), Postives = 223/284 (78.52%), Query Frame = 0 

Query: 3   GRRMMS----MSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCH 62
           GR MMS    MSMQESP+GRPFFRSPDDLYDDEYYDELYPEKKRRL+++Q          
Sbjct: 32  GRTMMSMSMNMSMQESPKGRPFFRSPDDLYDDEYYDELYPEKKRRLANEQ---------- 91

Query: 63  FHQFSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWK 122
                          VQMLEKSFEEENKLEPERK+QLAKKLGLQPRQVAVW+QNRRARWK
Sbjct: 92  ---------------VQMLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWK 151

Query: 123 TKQLERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELT-GEASVPHITS 182
           TKQLERDYD+LKASYDLL+SNYDSIVKENAVLKSEVASL EK + KEL  GEA +P  T 
Sbjct: 152 TKQLERDYDVLKASYDLLMSNYDSIVKENAVLKSEVASLTEKCVAKELDGGEAPIPRTTL 211

Query: 183 EPLLANIVHVSSPR---SGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEY---- 242
           EPLLA+  HVS+P    SGRKAEDRLSSGS+SSAV+DDNC QLIDSGDSYFPSNEY    
Sbjct: 212 EPLLADTAHVSAPHSGGSGRKAEDRLSSGSDSSAVIDDNCLQLIDSGDSYFPSNEYPQRA 271

Query: 243 -----LQIENDDKSDNGYNFFSDMFAATNQQNQEGGHPAWWAWP 270
                LQ+E+DD++DN    FSDMFA TNQQNQEGG PAWWAWP
Sbjct: 272 PLPPGLQMEHDDRNDNSNYLFSDMFAETNQQNQEGGPPAWWAWP 290

[Close]
BLAST of MS008904 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 241.5 bits (615), Expect = 7.8e-64
Identity = 144/272 (52.94%), Postives = 177/272 (65.07%), Query Frame = 0 

Query: 1   QGGRRMMSMSMQESPRGRPFFRSPDDLYDDEYYDELYPEKKRRLSHDQVCDICLLCCHFH 60
           QGG     M+M+E+ + RPFF SP+DLYDD++YD+  PEKKRRL+ +Q            
Sbjct: 29  QGGGARSMMNMEETSKRRPFFSSPEDLYDDDFYDDQLPEKKRRLTTEQ------------ 88

Query: 61  QFSLSSCGRTFFKVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTK 120
                        V +LEKSFE ENKLEPERKTQLAKKLGLQPRQVAVW+QNRRARWKTK
Sbjct: 89  -------------VHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTK 148

Query: 121 QLERDYDLLKASYDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPL 180
           QLERDYDLLK++YD LLSNYDSIV +N  L+SEV SL EK   K+ T     P    EP 
Sbjct: 149 QLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETAN-EPPGQVPEPN 208

Query: 181 LANIVHVSSPRSGRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQ-IENDDKS 240
             + V++++  +  K EDRLSSGS  SAV+DD+ PQL+DS DSYFPS   +Q   N    
Sbjct: 209 QLDPVYINA--AAIKTEDRLSSGSVGSAVLDDDAPQLLDSCDSYFPSIVPIQDNSNASDH 268

Query: 241 DNGYNFFSDMFAATNQQNQE--GGHPAWWAWP 270
           DN  + F+D+F  T   + +  G   A+W WP
Sbjct: 269 DNDRSCFADVFVPTTSPSHDHHGESLAFWGWP 272

[Close]
BLAST of MS008904 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 115.2 bits (287), Expect = 8.4e-26
Identity = 66/138 (47.83%), Postives = 84/138 (60.87%), Query Frame = 0 

Query: 28  YDDEYYDELYPEKKRRLSHDQVCDICLLCCHFHQFSLSSCGRTFFKVQMLEKSFEEENKL 87
           Y   ++     EKKRRL  DQ                         V+ LEK+FE ENKL
Sbjct: 47  YSGNHHHMGLSEKKRRLKVDQ-------------------------VKALEKNFELENKL 106

Query: 88  EPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDYDLLKASYDLLLSNYDSIVKEN 147
           EPERKT+LA++LGLQPRQVAVW+QNRRARWKTKQLE+DY +LK  YD L  N+DS+ ++N
Sbjct: 107 EPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDN 159

Query: 148 AVLKSEVASLAEKFLNKE 166
             L  E++ +  K   +E
Sbjct: 167 DSLLQEISKIKAKVNGEE 159

[Close]
BLAST of MS008904 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 0 

Query: 73  KVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDYDLLKAS 132
           +V+ LEK+FE ENKLEPERK +LA++LGLQPRQVAVW+QNRRARWKTKQLE+DY +LK  
Sbjct: 70  QVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQ 129

Query: 133 YDLLLSNYDSIVKENAVLKSEVASLAEK 161
           YD L  N+DS+ ++N  L  E++ L  K
Sbjct: 130 YDSLRHNFDSLRRDNESLLQEISKLKTK 157

[Close]
BLAST of MS008904 vs. TAIR 10
Match: AT5G15150.1 (homeobox 3 )

HSP 1 Score: 112.1 bits (279), Expect = 7.1e-25
Identity = 79/197 (40.10%), Postives = 108/197 (54.82%), Query Frame = 0 

Query: 73  KVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDYDLLKAS 132
           +V+ LEKSFE  NKLEPERK QLAK LGLQPRQ+A+W+QNRRARWKTKQLERDYD LK  
Sbjct: 123 QVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQ 182

Query: 133 YDLLLSNYDSIVKENAVLKSEVASLAEKFLNKELTGEASVPHITSEPLLANIVHVSSPRS 192
           +D+L S+ DS++  N  L +E+ +L +K   KE    A +    +E   +N        S
Sbjct: 183 FDVLKSDNDSLLAHNKKLHAELVAL-KKHDRKE---SAKIKREFAEASWSN------NGS 242

Query: 193 GRKAEDRLSSGSNSSAVVDDNCPQLIDSGDSYFPSNEYLQIENDDKSDNGYNFFSDMFAA 252
                +  SS +N  +++ D  P  I S  +   S         D+     N F+ +   
Sbjct: 243 TENNHNNNSSDANHVSMIKDLFPSSIRSATATTTSTHIDHQIVQDQDQGFCNMFNGIDET 301

Query: 253 TNQQNQEGGHPAWWAWP 270
           T+         ++WAWP
Sbjct: 303 TS--------ASYWAWP 301

[Close]
BLAST of MS008904 vs. TAIR 10
Match: AT5G65310.1 (homeobox protein 5 )

HSP 1 Score: 109.4 bits (272), Expect = 4.6e-24
Identity = 56/93 (60.22%), Postives = 74/93 (79.57%), Query Frame = 0 

Query: 73  KVQMLEKSFEEENKLEPERKTQLAKKLGLQPRQVAVWYQNRRARWKTKQLERDYDLLKAS 132
           +V+ LEK+FE +NKLEPERK +LA++LGLQPRQVA+W+QNRRARWKTKQLERDY +LK++
Sbjct: 80  QVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSN 139

Query: 133 YDLLLSNYDSIVKENAVLKSEVASLAEKFLNKE 166
           +D L  N DS+ ++N  L  ++  L  K LN E
Sbjct: 140 FDALKRNRDSLQRDNDSLLGQIKELKAK-LNVE 171

The following BLAST results are available for this feature:
BLAST of MS008904 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022150086.12.4e-14798.51homeobox-leucine zipper protein HAT5 isoform X2 [Momordica charantia][more]
XP_022150085.19.9e-14697.42homeobox-leucine zipper protein HAT5 isoform X1 [Momordica charantia][more]
XP_022150089.13.9e-12689.18homeobox-leucine zipper protein HAT5 isoform X4 [Momordica charantia][more]
XP_022150087.11.6e-12488.19homeobox-leucine zipper protein HAT5 isoform X3 [Momordica charantia][more]
XP_038903320.11.2e-10375.00homeobox-leucine zipper protein HAT5-like [Benincasa hispida][more]
BLAST of MS008904 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q022831.1e-6252.94Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=... [more]
A2X9804.6e-4541.05Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica OX=39946 GN=... [more]
Q6YWR44.6e-4541.05Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
Q9XH365.7e-3552.70Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. indica OX=39946 GN=H... [more]
Q6ZA745.7e-3552.70Homeobox-leucine zipper protein HOX5 OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
BLAST of MS008904 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DAE21.1e-14798.51homeobox-leucine zipper protein HAT5 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1D7I24.8e-14697.42homeobox-leucine zipper protein HAT5 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1D8Z81.9e-12689.18homeobox-leucine zipper protein HAT5 isoform X4 OS=Momordica charantia OX=3673 G... [more]
A0A6J1D9R68.0e-12588.19homeobox-leucine zipper protein HAT5 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1EJJ48.9e-10072.18homeobox-leucine zipper protein HAT5 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of MS008904 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G01470.17.8e-6452.94homeobox 1 [more]
AT4G40060.18.4e-2647.83homeobox protein 16 [more]
AT2G22430.11.9e-2563.64homeobox protein 6 [more]
AT5G15150.17.1e-2540.10homeobox 3 [more]
AT5G65310.14.6e-2460.22homeobox protein 5 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000047Helix-turn-helix motifPRINTSPR00031HTHREPRESSRcoord: 100..116
score: 54.08
coord: 91..100
score: 47.77
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 65..124
e-value: 6.5E-12
score: 55.6
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 74..118
e-value: 1.4E-14
score: 53.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 73..120
score: 15.224006
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 69..121
e-value: 8.10999E-14
score: 62.646
NoneNo IPR availableGENE3D1.10.10.60coord: 64..126
e-value: 5.0E-17
score: 63.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR24326HOMEOBOX-LEUCINE ZIPPER PROTEINcoord: 3..49
coord: 73..232
NoneNo IPR availablePANTHERPTHR24326:SF497HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5coord: 3..49
coord: 73..232
IPR003106Leucine zipper, homeobox-associatedPFAMPF02183HALZcoord: 120..160
e-value: 2.5E-15
score: 56.4
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 95..118
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 70..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS008904.1MS008904.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0043565 sequence-specific DNA binding