MS008897 (gene) Bitter gourd (TR) v1

Overview
NameMS008897
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold490: 96789 .. 97799 (+)
RNA-Seq ExpressionMS008897
SyntenyMS008897
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGCCACCAGATTCTGTCCAAACCCAAGCTTGGCTTCTCAGCTTCATTCCGAGAAGCCTTCAAAATCATCCTCTCTAATCATCCAACCTTCATCTCTCTCATCATCCTCTTCTCCTTCCCCCTCTTCGCCTCCCACACTCTCCTTCACCCGACCTTCGTTCAAATCCTCAAGCTTCTCTATCACAATGATCCCTTCAATCCATTCGTCGTTCACTTGATCGCCTGTCCAAGCAATGACACCAACTGCTTGTCCCTGCAGCAGTCTCCCATAACTGATGACAGCTTCAAGGTAATTCTCTCCCTGAGGTTTCTGATTTCGACTCTTCTACTGTCGGTGCTCGTCTTCTTCCTCGACCTTCTCAACACAATTGCAACAGTCTCCATATCAGCATCATTGTATGGAGGAAACATCCCCCAGATGGGTTTCAAGGAAATGCTGCTTCAAGCCAAAAGGGTGGGCCTCAAAGGGCCATTGACAACATCTCTATTTGCTGTTTTGATGGCTTCACTCACTCTCTTGGGTATGGTTGCTCTGTCAACATACATGTTTTTTGTGCCCGAAGGCATCTCTTTCATGTCAATAGACATTTCCATCTTCACATTAATTTTTGGGTCAATGTTTGTGGTTTTGTTGGCAAAGTATATAGAGTGGAGTGCTGTTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAATCAGGGGTATATAGCAATTGAGGTGGCAGGATTTCTGAGCAGAGGCAGCAGGAAGTTAGGGTTCAGTTTGATGCTGTTTTTCTTTGTTTTGAAGGTGGTTATTGGGATGCCTTGTCTCTATTCCTTGTGGAATGAGGGAAAAAGTTGTGGGGTTTTGGGGAATGTGGTGACTTTGAGTTTGAACTGTGTGGGGAATGTTGTGATGTGGGTTGTTCTTATGGTTTACTTCTATGACTGCAAAAGGGAGTTCTTGGAGAAGAAGATTGATTTGGAGAATAATGGGAGATCTATTGAGGTTGTTCAACAA

mRNA sequence

ATGGATAGCCACCAGATTCTGTCCAAACCCAAGCTTGGCTTCTCAGCTTCATTCCGAGAAGCCTTCAAAATCATCCTCTCTAATCATCCAACCTTCATCTCTCTCATCATCCTCTTCTCCTTCCCCCTCTTCGCCTCCCACACTCTCCTTCACCCGACCTTCGTTCAAATCCTCAAGCTTCTCTATCACAATGATCCCTTCAATCCATTCGTCGTTCACTTGATCGCCTGTCCAAGCAATGACACCAACTGCTTGTCCCTGCAGCAGTCTCCCATAACTGATGACAGCTTCAAGGTAATTCTCTCCCTGAGGTTTCTGATTTCGACTCTTCTACTGTCGGTGCTCGTCTTCTTCCTCGACCTTCTCAACACAATTGCAACAGTCTCCATATCAGCATCATTGTATGGAGGAAACATCCCCCAGATGGGTTTCAAGGAAATGCTGCTTCAAGCCAAAAGGGTGGGCCTCAAAGGGCCATTGACAACATCTCTATTTGCTGTTTTGATGGCTTCACTCACTCTCTTGGGTATGGTTGCTCTGTCAACATACATGTTTTTTGTGCCCGAAGGCATCTCTTTCATGTCAATAGACATTTCCATCTTCACATTAATTTTTGGGTCAATGTTTGTGGTTTTGTTGGCAAAGTATATAGAGTGGAGTGCTGTTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAATCAGGGGTATATAGCAATTGAGGTGGCAGGATTTCTGAGCAGAGGCAGCAGGAAGTTAGGGTTCAGTTTGATGCTGTTTTTCTTTGTTTTGAAGGTGGTTATTGGGATGCCTTGTCTCTATTCCTTGTGGAATGAGGGAAAAAGTTGTGGGGTTTTGGGGAATGTGGTGACTTTGAGTTTGAACTGTGTGGGGAATGTTGTGATGTGGGTTGTTCTTATGGTTTACTTCTATGACTGCAAAAGGGAGTTCTTGGAGAAGAAGATTGATTTGGAGAATAATGGGAGATCTATTGAGGTTGTTCAACAA

Coding sequence (CDS)

ATGGATAGCCACCAGATTCTGTCCAAACCCAAGCTTGGCTTCTCAGCTTCATTCCGAGAAGCCTTCAAAATCATCCTCTCTAATCATCCAACCTTCATCTCTCTCATCATCCTCTTCTCCTTCCCCCTCTTCGCCTCCCACACTCTCCTTCACCCGACCTTCGTTCAAATCCTCAAGCTTCTCTATCACAATGATCCCTTCAATCCATTCGTCGTTCACTTGATCGCCTGTCCAAGCAATGACACCAACTGCTTGTCCCTGCAGCAGTCTCCCATAACTGATGACAGCTTCAAGGTAATTCTCTCCCTGAGGTTTCTGATTTCGACTCTTCTACTGTCGGTGCTCGTCTTCTTCCTCGACCTTCTCAACACAATTGCAACAGTCTCCATATCAGCATCATTGTATGGAGGAAACATCCCCCAGATGGGTTTCAAGGAAATGCTGCTTCAAGCCAAAAGGGTGGGCCTCAAAGGGCCATTGACAACATCTCTATTTGCTGTTTTGATGGCTTCACTCACTCTCTTGGGTATGGTTGCTCTGTCAACATACATGTTTTTTGTGCCCGAAGGCATCTCTTTCATGTCAATAGACATTTCCATCTTCACATTAATTTTTGGGTCAATGTTTGTGGTTTTGTTGGCAAAGTATATAGAGTGGAGTGCTGTTTGGAACATGGGAATTGTTATCTCAATCTTGGATAAGAATCAGGGGTATATAGCAATTGAGGTGGCAGGATTTCTGAGCAGAGGCAGCAGGAAGTTAGGGTTCAGTTTGATGCTGTTTTTCTTTGTTTTGAAGGTGGTTATTGGGATGCCTTGTCTCTATTCCTTGTGGAATGAGGGAAAAAGTTGTGGGGTTTTGGGGAATGTGGTGACTTTGAGTTTGAACTGTGTGGGGAATGTTGTGATGTGGGTTGTTCTTATGGTTTACTTCTATGACTGCAAAAGGGAGTTCTTGGAGAAGAAGATTGATTTGGAGAATAATGGGAGATCTATTGAGGTTGTTCAACAA

Protein sequence

MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKLLYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLDLLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVALSTYMFFVPEGISFMSIDISIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGYIAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCVGNVVMWVVLMVYFYDCKREFLEKKIDLENNGRSIEVVQQ
Homology
BLAST of MS008897 vs. NCBI nr
Match: XP_022150095.1 (uncharacterized protein LOC111018355 [Momordica charantia])

HSP 1 Score: 630.9 bits (1626), Expect = 6.1e-177
Identity = 332/333 (99.70%), Postives = 333/333 (100.00%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKL 60
           MDSHQILSKPKLGFS+SFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKL
Sbjct: 5   MDSHQILSKPKLGFSSSFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKL 64

Query: 61  LYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLD 120
           LYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLD
Sbjct: 65  LYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLD 124

Query: 121 LLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVAL 180
           LLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVAL
Sbjct: 125 LLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVAL 184

Query: 181 STYMFFVPEGISFMSIDISIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGYIA 240
           STYMFFVPEGISFMSIDISIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGYIA
Sbjct: 185 STYMFFVPEGISFMSIDISIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGYIA 244

Query: 241 IEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCVGN 300
           IEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCVGN
Sbjct: 245 IEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCVGN 304

Query: 301 VVMWVVLMVYFYDCKREFLEKKIDLENNGRSIE 334
           VVMWVVLMVYFYDCKREFLEKKIDLENNGRSIE
Sbjct: 305 VVMWVVLMVYFYDCKREFLEKKIDLENNGRSIE 337

BLAST of MS008897 vs. NCBI nr
Match: XP_022150083.1 (uncharacterized protein LOC111018347 [Momordica charantia])

HSP 1 Score: 563.9 bits (1452), Expect = 9.2e-157
Identity = 303/339 (89.38%), Postives = 314/339 (92.63%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKL 60
           MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQIL+L
Sbjct: 25  MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILEL 84

Query: 61  LYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLD 120
           LY  DPFNP VVHLIAC S DTNC SLQQSP  DDSF+ ILSLRFLISTLLLSVLVFFLD
Sbjct: 85  LYRKDPFNPHVVHLIACRSTDTNCSSLQQSPSIDDSFEAILSLRFLISTLLLSVLVFFLD 144

Query: 121 LLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVAL 180
           LLNTIATVSISASLYGGN  QMGFKEMLLQAKR+GLKGPLTT LFAVL+ASL LLG+VAL
Sbjct: 145 LLNTIATVSISASLYGGNSSQMGFKEMLLQAKRLGLKGPLTTYLFAVLLASLILLGLVAL 204

Query: 181 STYMFFVPEGISFMSIDISIFT--LIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGY 240
           ST MFFV +GISFMSIDI   +  L FGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGY
Sbjct: 205 STNMFFVTKGISFMSIDIFFISQLLFFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGY 264

Query: 241 IAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCV 300
           IAI VAGFLSRGSRKLGFSLML FFVLKVV G+PCLYSLWNEGK+CGVLGNVVTLSLNC+
Sbjct: 265 IAIGVAGFLSRGSRKLGFSLMLVFFVLKVVFGIPCLYSLWNEGKNCGVLGNVVTLSLNCM 324

Query: 301 GNVVMWVVLMVYFYDCKREFLEKKIDLENNGRSIEVVQQ 338
           GNVVMWVVLMVYFYDCKREFLEKKIDLENNG+S EVVQQ
Sbjct: 325 GNVVMWVVLMVYFYDCKREFLEKKIDLENNGKSTEVVQQ 363

BLAST of MS008897 vs. NCBI nr
Match: XP_016899697.1 (PREDICTED: uncharacterized protein LOC107990618 [Cucumis melo] >KAA0053688.1 uncharacterized protein E6C27_scaffold135G00610 [Cucumis melo var. makuwa] >TYK13985.1 uncharacterized protein E5676_scaffold1119G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 411.8 bits (1057), Expect = 5.8e-111
Identity = 242/358 (67.60%), Postives = 281/358 (78.49%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFAS----HTLLHPTFVQ 60
           M+SHQILSKPKLGFSASF+EA K IL NHP FISLII FSFPL AS      LLHPTF+ 
Sbjct: 1   MESHQILSKPKLGFSASFKEALK-ILFNHPKFISLIIFFSFPLLASLLAHQILLHPTFIH 60

Query: 61  ILKLLYHNDPFNPF-VVHLIACPSNDTNCLSLQQSPITDD------SFKVILSLRFLIST 120
           +LKLL+H+DPF P  +V +I C  N T C+     P+ D+      +FK ILS RFLIST
Sbjct: 61  LLKLLFHHDPFQPISIVRIIDC-RNSTLCV---LEPLDDNPSPPIKTFKEILSQRFLIST 120

Query: 121 LLLSVLVFFLDLLNTIATVSISASLYGGNIPQMGFKEMLLQAKR---VGLKGPLTTSLFA 180
           LLL+ ++FFLDLLNTIATVSISA++YGGN  QMGFKEML+Q  +   + LKG + TSL  
Sbjct: 121 LLLTSIIFFLDLLNTIATVSISAAIYGGN-SQMGFKEMLVQVIKMVALKLKGAIETSLCF 180

Query: 181 VLMASLTLLGMVALSTYMFFVPEGISFMSIDI------SIFTLIFGSMFVVLLAKYIEWS 240
           +L+AS+TLLG+VALST  FF+ +   FM +DI      +I TL FGS+FVVLL KYIEWS
Sbjct: 181 ILLASVTLLGLVALSTDFFFITKDHHFMMLDIIFVSKFTIVTLFFGSLFVVLLGKYIEWS 240

Query: 241 AVWNMGIVISILDKNQGYIAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNE 300
           AVWNMGIVISILDKN+GYIAI VA +LSRGSR+LGFSLM+ FFVLKV  G+PCLYSLWNE
Sbjct: 241 AVWNMGIVISILDKNKGYIAIGVASYLSRGSRRLGFSLMMVFFVLKVAFGLPCLYSLWNE 300

Query: 301 GKSCGVLGNVVTLSLNCVGNVVMWVVLMVYFYDCKREFLEKKIDLENN-GRSIEVVQQ 338
           G SCGVLGNVV + LNCVGNVVMWVVLMVYFYDCKREFLEKK+DLENN  ++ E VQQ
Sbjct: 301 G-SCGVLGNVVFVILNCVGNVVMWVVLMVYFYDCKREFLEKKVDLENNEKKAFEAVQQ 351

BLAST of MS008897 vs. NCBI nr
Match: XP_038904922.1 (uncharacterized protein LOC120091132 [Benincasa hispida])

HSP 1 Score: 405.6 bits (1041), Expect = 4.2e-109
Identity = 236/353 (66.86%), Postives = 280/353 (79.32%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFAS----HTLLHPTFVQ 60
           M+SHQILSKPKLGFS SFREA K IL NHP F+SLII FSFPL AS      LLHPTF+ 
Sbjct: 1   MESHQILSKPKLGFSTSFREALK-ILFNHPKFVSLIIFFSFPLLASLLANQILLHPTFIH 60

Query: 61  ILKLLYHNDPFN-PFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVL 120
           +LKLLYH+   N P ++ +I C ++   C+S +  P    SFK   S  FLISTLLL V+
Sbjct: 61  LLKLLYHHSLHNPPSILRIINCKASARICIS-EAIPFPIKSFKETHSQSFLISTLLLPVI 120

Query: 121 VFFLDLLNTIATVSISASLYGGNIPQMGFKEMLLQAKR---VGLKGPLTTSLFAVLMASL 180
           +FFLDLLNTIA VSISA++YGGN  QMGFKEML+Q ++   + L+G + TSLF+VL+ASL
Sbjct: 121 IFFLDLLNTIAIVSISAAIYGGN-SQMGFKEMLVQVRKMVALKLRGSVETSLFSVLLASL 180

Query: 181 TLLGMVALSTYMFFVPEGISFMSI-------DISIFTLIFGSMFVVLLAKYIEWSAVWNM 240
           TLLG+VALST +F+  +GISFMSI       +++IFTL FGS+FVVLL KYIEWSAVW+M
Sbjct: 181 TLLGLVALSTDIFYRTKGISFMSIIDISFITELTIFTLFFGSIFVVLLGKYIEWSAVWHM 240

Query: 241 GIVISILDKNQGYIAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCG 300
           GIVISILDKN+GYIAI VA +LSRGSRKLG SLM+ FFVLK+V G PCLY+LWNEG SCG
Sbjct: 241 GIVISILDKNKGYIAIGVASYLSRGSRKLGLSLMMVFFVLKMVFGFPCLYALWNEG-SCG 300

Query: 301 VLGNVVTLSLNCVGNVVMWVVLMVYFYDCKREFLEKKIDLENN-GRSIEVVQQ 338
           VLGNVV +SLNC+ NVVMWVVLMVYFYDCKREFL KK+DLENN  ++IE V+Q
Sbjct: 301 VLGNVVFVSLNCMENVVMWVVLMVYFYDCKREFLGKKVDLENNEKKAIEAVKQ 349

BLAST of MS008897 vs. NCBI nr
Match: KGN59645.1 (hypothetical protein Csa_002408 [Cucumis sativus])

HSP 1 Score: 401.4 bits (1030), Expect = 7.9e-108
Identity = 239/360 (66.39%), Postives = 282/360 (78.33%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFAS----HTLLHPTFVQ 60
           M++HQILSKPKLGFSASF+EA K IL NHP FISLII FSFPL AS      LLHPTF++
Sbjct: 1   MENHQILSKPKLGFSASFKEALK-ILFNHPKFISLIIFFSFPLLASLLAHQILLHPTFIR 60

Query: 61  ILKLLYHNDPFNP-FVVHLIA--CPSNDTNCLSLQQSPITDD------SFKVILSLRFLI 120
           +LKLLYH+DPF+P  +V LI   C S +  C +LQ  P+ D+      +FK  LS RFLI
Sbjct: 61  LLKLLYHHDPFHPTSIVRLIKINCKSPNVYC-ALQ--PLDDNPSPPIKTFKETLSQRFLI 120

Query: 121 STLLLSVLVFFLDLLNTIATVSISASLYGGNIPQMGFKEMLLQAKR---VGLKGPLTTSL 180
           STLLL+ ++FFLDLLNTIATVSISA++YGGN  QMGFKEML+Q ++   + LKG + TSL
Sbjct: 121 STLLLTSIIFFLDLLNTIATVSISAAIYGGN-SQMGFKEMLVQIRKMVALKLKGAIETSL 180

Query: 181 FAVLMASLTLLGMVALSTYMFFVPEGISFMSIDI------SIFTLIFGSMFVVLLAKYIE 240
             +L+ASLTLLG+VALS   F++ +   FM  DI      +IFTL FGS+FVVLL KYIE
Sbjct: 181 CFILLASLTLLGLVALSKDFFYITKDHPFMMSDIIFVSKFTIFTLFFGSLFVVLLGKYIE 240

Query: 241 WSAVWNMGIVISILDKNQGYIAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLW 300
           WSAVWNMGIVISILDKN+GYIAI VA +LSRGSR+LGFSLM+ F VLKV  G+PCLY+LW
Sbjct: 241 WSAVWNMGIVISILDKNKGYIAIGVASYLSRGSRRLGFSLMMVFLVLKVAFGLPCLYALW 300

Query: 301 NEGKSCGVLGNVVTLSLNCVGNVVMWVVLMVYFYDCKREFLEKKIDLEN-NGRSIEVVQQ 338
           NEG +CGVLGNVV + LNCVGNVVMWVVLMVYFYDCKREFLEKK+DLEN   ++ E VQQ
Sbjct: 301 NEG-NCGVLGNVVFVILNCVGNVVMWVVLMVYFYDCKREFLEKKVDLENTEKKAFEAVQQ 354

BLAST of MS008897 vs. ExPASy TrEMBL
Match: A0A6J1D7J2 (uncharacterized protein LOC111018355 OS=Momordica charantia OX=3673 GN=LOC111018355 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.0e-177
Identity = 332/333 (99.70%), Postives = 333/333 (100.00%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKL 60
           MDSHQILSKPKLGFS+SFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKL
Sbjct: 5   MDSHQILSKPKLGFSSSFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKL 64

Query: 61  LYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLD 120
           LYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLD
Sbjct: 65  LYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLD 124

Query: 121 LLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVAL 180
           LLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVAL
Sbjct: 125 LLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVAL 184

Query: 181 STYMFFVPEGISFMSIDISIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGYIA 240
           STYMFFVPEGISFMSIDISIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGYIA
Sbjct: 185 STYMFFVPEGISFMSIDISIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGYIA 244

Query: 241 IEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCVGN 300
           IEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCVGN
Sbjct: 245 IEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCVGN 304

Query: 301 VVMWVVLMVYFYDCKREFLEKKIDLENNGRSIE 334
           VVMWVVLMVYFYDCKREFLEKKIDLENNGRSIE
Sbjct: 305 VVMWVVLMVYFYDCKREFLEKKIDLENNGRSIE 337

BLAST of MS008897 vs. ExPASy TrEMBL
Match: A0A6J1D8I0 (uncharacterized protein LOC111018347 OS=Momordica charantia OX=3673 GN=LOC111018347 PE=4 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 4.4e-157
Identity = 303/339 (89.38%), Postives = 314/339 (92.63%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILKL 60
           MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQIL+L
Sbjct: 25  MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFASHTLLHPTFVQILEL 84

Query: 61  LYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVFFLD 120
           LY  DPFNP VVHLIAC S DTNC SLQQSP  DDSF+ ILSLRFLISTLLLSVLVFFLD
Sbjct: 85  LYRKDPFNPHVVHLIACRSTDTNCSSLQQSPSIDDSFEAILSLRFLISTLLLSVLVFFLD 144

Query: 121 LLNTIATVSISASLYGGNIPQMGFKEMLLQAKRVGLKGPLTTSLFAVLMASLTLLGMVAL 180
           LLNTIATVSISASLYGGN  QMGFKEMLLQAKR+GLKGPLTT LFAVL+ASL LLG+VAL
Sbjct: 145 LLNTIATVSISASLYGGNSSQMGFKEMLLQAKRLGLKGPLTTYLFAVLLASLILLGLVAL 204

Query: 181 STYMFFVPEGISFMSIDISIFT--LIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGY 240
           ST MFFV +GISFMSIDI   +  L FGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGY
Sbjct: 205 STNMFFVTKGISFMSIDIFFISQLLFFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQGY 264

Query: 241 IAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKSCGVLGNVVTLSLNCV 300
           IAI VAGFLSRGSRKLGFSLML FFVLKVV G+PCLYSLWNEGK+CGVLGNVVTLSLNC+
Sbjct: 265 IAIGVAGFLSRGSRKLGFSLMLVFFVLKVVFGIPCLYSLWNEGKNCGVLGNVVTLSLNCM 324

Query: 301 GNVVMWVVLMVYFYDCKREFLEKKIDLENNGRSIEVVQQ 338
           GNVVMWVVLMVYFYDCKREFLEKKIDLENNG+S EVVQQ
Sbjct: 325 GNVVMWVVLMVYFYDCKREFLEKKIDLENNGKSTEVVQQ 363

BLAST of MS008897 vs. ExPASy TrEMBL
Match: A0A5D3CQZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1119G00100 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.8e-111
Identity = 242/358 (67.60%), Postives = 281/358 (78.49%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFAS----HTLLHPTFVQ 60
           M+SHQILSKPKLGFSASF+EA K IL NHP FISLII FSFPL AS      LLHPTF+ 
Sbjct: 1   MESHQILSKPKLGFSASFKEALK-ILFNHPKFISLIIFFSFPLLASLLAHQILLHPTFIH 60

Query: 61  ILKLLYHNDPFNPF-VVHLIACPSNDTNCLSLQQSPITDD------SFKVILSLRFLIST 120
           +LKLL+H+DPF P  +V +I C  N T C+     P+ D+      +FK ILS RFLIST
Sbjct: 61  LLKLLFHHDPFQPISIVRIIDC-RNSTLCV---LEPLDDNPSPPIKTFKEILSQRFLIST 120

Query: 121 LLLSVLVFFLDLLNTIATVSISASLYGGNIPQMGFKEMLLQAKR---VGLKGPLTTSLFA 180
           LLL+ ++FFLDLLNTIATVSISA++YGGN  QMGFKEML+Q  +   + LKG + TSL  
Sbjct: 121 LLLTSIIFFLDLLNTIATVSISAAIYGGN-SQMGFKEMLVQVIKMVALKLKGAIETSLCF 180

Query: 181 VLMASLTLLGMVALSTYMFFVPEGISFMSIDI------SIFTLIFGSMFVVLLAKYIEWS 240
           +L+AS+TLLG+VALST  FF+ +   FM +DI      +I TL FGS+FVVLL KYIEWS
Sbjct: 181 ILLASVTLLGLVALSTDFFFITKDHHFMMLDIIFVSKFTIVTLFFGSLFVVLLGKYIEWS 240

Query: 241 AVWNMGIVISILDKNQGYIAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNE 300
           AVWNMGIVISILDKN+GYIAI VA +LSRGSR+LGFSLM+ FFVLKV  G+PCLYSLWNE
Sbjct: 241 AVWNMGIVISILDKNKGYIAIGVASYLSRGSRRLGFSLMMVFFVLKVAFGLPCLYSLWNE 300

Query: 301 GKSCGVLGNVVTLSLNCVGNVVMWVVLMVYFYDCKREFLEKKIDLENN-GRSIEVVQQ 338
           G SCGVLGNVV + LNCVGNVVMWVVLMVYFYDCKREFLEKK+DLENN  ++ E VQQ
Sbjct: 301 G-SCGVLGNVVFVILNCVGNVVMWVVLMVYFYDCKREFLEKKVDLENNEKKAFEAVQQ 351

BLAST of MS008897 vs. ExPASy TrEMBL
Match: A0A1S4DUN1 (uncharacterized protein LOC107990618 OS=Cucumis melo OX=3656 GN=LOC107990618 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.8e-111
Identity = 242/358 (67.60%), Postives = 281/358 (78.49%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFAS----HTLLHPTFVQ 60
           M+SHQILSKPKLGFSASF+EA K IL NHP FISLII FSFPL AS      LLHPTF+ 
Sbjct: 1   MESHQILSKPKLGFSASFKEALK-ILFNHPKFISLIIFFSFPLLASLLAHQILLHPTFIH 60

Query: 61  ILKLLYHNDPFNPF-VVHLIACPSNDTNCLSLQQSPITDD------SFKVILSLRFLIST 120
           +LKLL+H+DPF P  +V +I C  N T C+     P+ D+      +FK ILS RFLIST
Sbjct: 61  LLKLLFHHDPFQPISIVRIIDC-RNSTLCV---LEPLDDNPSPPIKTFKEILSQRFLIST 120

Query: 121 LLLSVLVFFLDLLNTIATVSISASLYGGNIPQMGFKEMLLQAKR---VGLKGPLTTSLFA 180
           LLL+ ++FFLDLLNTIATVSISA++YGGN  QMGFKEML+Q  +   + LKG + TSL  
Sbjct: 121 LLLTSIIFFLDLLNTIATVSISAAIYGGN-SQMGFKEMLVQVIKMVALKLKGAIETSLCF 180

Query: 181 VLMASLTLLGMVALSTYMFFVPEGISFMSIDI------SIFTLIFGSMFVVLLAKYIEWS 240
           +L+AS+TLLG+VALST  FF+ +   FM +DI      +I TL FGS+FVVLL KYIEWS
Sbjct: 181 ILLASVTLLGLVALSTDFFFITKDHHFMMLDIIFVSKFTIVTLFFGSLFVVLLGKYIEWS 240

Query: 241 AVWNMGIVISILDKNQGYIAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLWNE 300
           AVWNMGIVISILDKN+GYIAI VA +LSRGSR+LGFSLM+ FFVLKV  G+PCLYSLWNE
Sbjct: 241 AVWNMGIVISILDKNKGYIAIGVASYLSRGSRRLGFSLMMVFFVLKVAFGLPCLYSLWNE 300

Query: 301 GKSCGVLGNVVTLSLNCVGNVVMWVVLMVYFYDCKREFLEKKIDLENN-GRSIEVVQQ 338
           G SCGVLGNVV + LNCVGNVVMWVVLMVYFYDCKREFLEKK+DLENN  ++ E VQQ
Sbjct: 301 G-SCGVLGNVVFVILNCVGNVVMWVVLMVYFYDCKREFLEKKVDLENNEKKAFEAVQQ 351

BLAST of MS008897 vs. ExPASy TrEMBL
Match: A0A0A0LCA3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835820 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 3.8e-108
Identity = 239/360 (66.39%), Postives = 282/360 (78.33%), Query Frame = 0

Query: 1   MDSHQILSKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLFAS----HTLLHPTFVQ 60
           M++HQILSKPKLGFSASF+EA K IL NHP FISLII FSFPL AS      LLHPTF++
Sbjct: 1   MENHQILSKPKLGFSASFKEALK-ILFNHPKFISLIIFFSFPLLASLLAHQILLHPTFIR 60

Query: 61  ILKLLYHNDPFNP-FVVHLIA--CPSNDTNCLSLQQSPITDD------SFKVILSLRFLI 120
           +LKLLYH+DPF+P  +V LI   C S +  C +LQ  P+ D+      +FK  LS RFLI
Sbjct: 61  LLKLLYHHDPFHPTSIVRLIKINCKSPNVYC-ALQ--PLDDNPSPPIKTFKETLSQRFLI 120

Query: 121 STLLLSVLVFFLDLLNTIATVSISASLYGGNIPQMGFKEMLLQAKR---VGLKGPLTTSL 180
           STLLL+ ++FFLDLLNTIATVSISA++YGGN  QMGFKEML+Q ++   + LKG + TSL
Sbjct: 121 STLLLTSIIFFLDLLNTIATVSISAAIYGGN-SQMGFKEMLVQIRKMVALKLKGAIETSL 180

Query: 181 FAVLMASLTLLGMVALSTYMFFVPEGISFMSIDI------SIFTLIFGSMFVVLLAKYIE 240
             +L+ASLTLLG+VALS   F++ +   FM  DI      +IFTL FGS+FVVLL KYIE
Sbjct: 181 CFILLASLTLLGLVALSKDFFYITKDHPFMMSDIIFVSKFTIFTLFFGSLFVVLLGKYIE 240

Query: 241 WSAVWNMGIVISILDKNQGYIAIEVAGFLSRGSRKLGFSLMLFFFVLKVVIGMPCLYSLW 300
           WSAVWNMGIVISILDKN+GYIAI VA +LSRGSR+LGFSLM+ F VLKV  G+PCLY+LW
Sbjct: 241 WSAVWNMGIVISILDKNKGYIAIGVASYLSRGSRRLGFSLMMVFLVLKVAFGLPCLYALW 300

Query: 301 NEGKSCGVLGNVVTLSLNCVGNVVMWVVLMVYFYDCKREFLEKKIDLEN-NGRSIEVVQQ 338
           NEG +CGVLGNVV + LNCVGNVVMWVVLMVYFYDCKREFLEKK+DLEN   ++ E VQQ
Sbjct: 301 NEG-NCGVLGNVVFVILNCVGNVVMWVVLMVYFYDCKREFLEKKVDLENTEKKAFEAVQQ 354

BLAST of MS008897 vs. TAIR 10
Match: AT1G23840.1 (unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23850.1); Has 53 Blast hits to 48 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-20
Identity = 88/257 (34.24%), Postives = 136/257 (52.92%), Query Frame = 0

Query: 103 LRFLISTLLLSVLVF-FLDLLNTIATVSISASLYGGNIPQMGF-----KEMLLQAKRVGL 162
           L +LI T LL    +  LDLL T   V+ S+  Y      +G      +   L   +VG 
Sbjct: 77  LPWLIQTTLLYFFPYTILDLLTTTTIVAASSIAYTSEEEPLGLLYLVGRSFKLCQNKVG- 136

Query: 163 KGPLTTSLFAVLMASLTLLGMVALST-YMFF----VPEGISF---------------MSI 222
            G L TSL+ +L+++   LG+ + ST Y++F    + + I F               + +
Sbjct: 137 -GCLITSLYVLLLSTSVFLGLFSGSTIYLYFASLTLEQQIFFNQAVVQDQRFLEQAVVLL 196

Query: 223 DISIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQ------GYIAIEVAGFLSRG 282
           D+ +  LI G++F+VL AK+ +WSA WN+ +V+S+L++ +      G  A+ ++ +  RG
Sbjct: 197 DV-VVVLIHGTVFIVLAAKFSKWSAGWNISMVVSVLEEEEDSKGIYGSSALSLSAWYLRG 256

Query: 283 SRKLGFSLMLFFFVLKVVIGMPCLYSLWNEGKS-CGVLGNVVTLSLNCVGNVVMWVVLMV 327
             K  F +ML F V  +V  MPCLY   +E  S  GVL   + +SL CVGNVV WV  +V
Sbjct: 257 QEKRDFWMMLVFLVGALVTRMPCLYYKCSESLSGNGVLYTGLYVSLICVGNVVKWVSCVV 316

BLAST of MS008897 vs. TAIR 10
Match: AT1G23830.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 57 Blast hits to 52 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-17
Identity = 98/359 (27.30%), Postives = 165/359 (45.96%), Query Frame = 0

Query: 8   SKPKLGFSASFREAFKIILSNHPTFISLIILFSFPLF--------ASHTLLHPTFVQILK 67
           S+ KL      + A K++  N    +  + L S PLF        +  T ++ T   + K
Sbjct: 5   SEEKLSVIELLKRALKLLFGN-INLLLFLCLCSLPLFFFLIFFELSLQTTVYLTSQFLWK 64

Query: 68  LLYHNDPFNPFVVHLIACPSNDTNCLSLQQSPITDDSFKVILSLRFLISTLLLSVLVF-F 127
           LL   +            P ND   +S +++ +          + +LI T LL    +  
Sbjct: 65  LLILGEDL----------PENDLILISEKKNDL----------ISWLIQTFLLYFFPYTI 124

Query: 128 LDLLNTIATVSISASLYGGNIPQMGF-----KEMLLQAKRVGLKGPLTTSLFAVLMASLT 187
           LDLL T   V+ S+ +Y      +G      + + +   RVG  G L TSL+ VL+ S +
Sbjct: 125 LDLLTTTTIVAASSIVYTSKEEPLGLLYLVERSIKICQNRVG--GCLITSLY-VLLWSTS 184

Query: 188 LLGMVALSTYMFFVPEGISFMSID--------------------ISIFTLIFGSMFVVLL 247
           +     L  ++ F+    +++SI                     + +  L+  ++F+VL 
Sbjct: 185 VFLFFFLFFFLQFLSGSTNYVSIPYLSREYKGFHYQPTGLFNVVVPLTLLMQCTLFIVLT 244

Query: 248 AKYIEWSAVWNMGIVISILDKNQ------GYIAIEVAGFLSRGSRKLGFSLMLFFFVLKV 307
           AKY +WS+ WNMG+V+S+L++++      G  A+ ++G+  +G  K    LML F V  +
Sbjct: 245 AKYSKWSSGWNMGLVVSVLEEDEDGQGIYGGDALSLSGWYRKGHEKRDLWLMLMFLVFGL 304

Query: 308 VIGMPCLYSLWNEGKSCGVLGNVVTLSLNCVGNVVMWVVLMVYFYDCKREFLEKKIDLE 327
              MPCLYS  +   + GV+     + L CVGN++ WV  +  ++DCK   L KK D+E
Sbjct: 305 ATRMPCLYSKCSASGN-GVMYTGFYVGLICVGNLLKWVTCLACYHDCKTMVLRKKRDVE 338

BLAST of MS008897 vs. TAIR 10
Match: AT1G23850.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-16
Identity = 71/260 (27.31%), Postives = 125/260 (48.08%), Query Frame = 0

Query: 106 LISTLLLSVLVF-FLDLLNTIATVSISASLYGGNIPQMGFKEMLLQAKRV---GLKGPLT 165
           LI T LL +  +  +DL  T   VS S +++      + F +++ +   +    L+G L 
Sbjct: 85  LIQTFLLYLFPYGLIDLFTTTTIVSASWTVHTSEEEPLRFGQLVRRTVEICQNRLEGCLI 144

Query: 166 TSLFAVLMASLTLLGMVALSTYMFFV------PEGISFMSIDI----------------- 225
           TSL+ +L+++    G + ++T  F +       E   + SI+I                 
Sbjct: 145 TSLYVLLLSTPVFFGFLFVATNYFHIISLTGSGENSYYYSINIEEDAEGYYRSSSVNSPV 204

Query: 226 -----SIFTLIFGSMFVVLLAKYIEWSAVWNMGIVISILDKNQ------GYIAIEVAGFL 285
                ++  +  G++F+ LLA + +WSA WNMG+V+S+L++ +      G  A+ ++   
Sbjct: 205 KMLFDAVLAMFHGAIFLGLLAMFSKWSAGWNMGLVVSVLEEEENGQSIYGTDALTLSSNY 264

Query: 286 SRGSRKLGFSLMLFFFVLKVVIGMPCL-YSLWNEGKSCGVLGNVVTLSLNCVGNVVMWVV 327
            +G  K G  +ML F V  + + MPC  +          VL     + L CVGN++ WV 
Sbjct: 265 GKGHEKRGLQVMLVFLVFAIAMRMPCFCFKCTESSNGNRVLYTSFYVGLICVGNMIKWVA 324

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022150095.16.1e-17799.70uncharacterized protein LOC111018355 [Momordica charantia][more]
XP_022150083.19.2e-15789.38uncharacterized protein LOC111018347 [Momordica charantia][more]
XP_016899697.15.8e-11167.60PREDICTED: uncharacterized protein LOC107990618 [Cucumis melo] >KAA0053688.1 unc... [more]
XP_038904922.14.2e-10966.86uncharacterized protein LOC120091132 [Benincasa hispida][more]
KGN59645.17.9e-10866.39hypothetical protein Csa_002408 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1D7J23.0e-17799.70uncharacterized protein LOC111018355 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1D8I04.4e-15789.38uncharacterized protein LOC111018347 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A5D3CQZ02.8e-11167.60Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4DUN12.8e-11167.60uncharacterized protein LOC107990618 OS=Cucumis melo OX=3656 GN=LOC107990618 PE=... [more]
A0A0A0LCA33.8e-10866.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G835820 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G23840.11.7e-2034.24unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structu... [more]
AT1G23830.16.8e-1727.30unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G23850.11.5e-1627.31unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36714:SF1T23E23.1coord: 1..336
NoneNo IPR availablePANTHERPTHR36714T23E23.1coord: 1..336

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS008897.1MS008897.1mRNA