MS008724 (gene) Bitter gourd (TR) v1

Overview


Name	MS008724
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MFP1 attachment factor 1-like
Location	scaffold4: 3339081 .. 3339548 (+)
RNA-Seq Expression	MS008724
Synteny	MS008724

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAGCCTGAGATCGCCGCCGTGCCAACTTCTCCACCGTCGAAAGCCGCAACGGATTCCCCTGGAGATCAGGCCAAGGAGCTAACCAAATCGCCGAAATCCTTTAGCGCCTCGTTCAGTATTTGGCCGCCTTCACAACGCACGCGTGACGCTGTCGTCAAACGTCTGATCGAGACGCTCTCGAACCCCTCCGTTCTCTCCAAGCGCTATGGCACTGTACCCCAAGATGAGGCCGCTGAAGCAGCGCGTCTTATAGAGGAGGAAGCTTATTCTTTCGCCGCATCTAAAGCCAACGCCGACGACGACGGGATCGAGATCCTTCAGCTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACAGTCAAGGCGAAAGCGGCACCCGATTCCACAGCCGAAAACGGTTCGTCTTCTCCTGCTGCATCGGCGACCATTAAGGAGGAAACCCCCTCTGTTGAAGAATCC

mRNA sequence

ATGTCTGAGCCTGAGATCGCCGCCGTGCCAACTTCTCCACCGTCGAAAGCCGCAACGGATTCCCCTGGAGATCAGGCCAAGGAGCTAACCAAATCGCCGAAATCCTTTAGCGCCTCGTTCAGTATTTGGCCGCCTTCACAACGCACGCGTGACGCTGTCGTCAAACGTCTGATCGAGACGCTCTCGAACCCCTCCGTTCTCTCCAAGCGCTATGGCACTGTACCCCAAGATGAGGCCGCTGAAGCAGCGCGTCTTATAGAGGAGGAAGCTTATTCTTTCGCCGCATCTAAAGCCAACGCCGACGACGACGGGATCGAGATCCTTCAGCTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACAGTCAAGGCGAAAGCGGCACCCGATTCCACAGCCGAAAACGGTTCGTCTTCTCCTGCTGCATCGGCGACCATTAAGGAGGAAACCCCCTCTGTTGAAGAATCC

Coding sequence (CDS)

ATGTCTGAGCCTGAGATCGCCGCCGTGCCAACTTCTCCACCGTCGAAAGCCGCAACGGATTCCCCTGGAGATCAGGCCAAGGAGCTAACCAAATCGCCGAAATCCTTTAGCGCCTCGTTCAGTATTTGGCCGCCTTCACAACGCACGCGTGACGCTGTCGTCAAACGTCTGATCGAGACGCTCTCGAACCCCTCCGTTCTCTCCAAGCGCTATGGCACTGTACCCCAAGATGAGGCCGCTGAAGCAGCGCGTCTTATAGAGGAGGAAGCTTATTCTTTCGCCGCATCTAAAGCCAACGCCGACGACGACGGGATCGAGATCCTTCAGCTATATTCTAGGGAGATCAGCAAGCGCACGCTCGAGACAGTCAAGGCGAAAGCGGCACCCGATTCCACAGCCGAAAACGGTTCGTCTTCTCCTGCTGCATCGGCGACCATTAAGGAGGAAACCCCCTCTGTTGAAGAATCC

Protein sequence

MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIETLSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTLETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES

Homology

[Close]

BLAST of MS008724 vs. NCBI nr
Match: XP_022143006.1 (MFP1 attachment factor 1-like [Momordica charantia])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET
Sbjct: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES 157
           ETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES
Sbjct: 121 ETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES 156

[Close]

BLAST of MS008724 vs. NCBI nr
Match: KAG6591406.1 (MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 126/155 (81.29%), Postives = 136/155 (87.74%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           MSEPEIA VPT+       DSPGDQAKE  KS KSFS SFSIWPPSQRTRDAV+KRLIET
Sbjct: 1   MSEPEIATVPTT-----EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIET 60

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LSNPSVLSKRYGTVP +EA +AARLIEEEAYSFAA+KA+ADDDGIEILQLYSREISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKAKAAPDSTAENGSSSPAASATIKEETPSVEE 156
           +TVKA+AA DSTAENGSS+P  S T KEETPSV+E
Sbjct: 121 DTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 150

[Close]

BLAST of MS008724 vs. NCBI nr
Match: XP_022977133.1 (MFP1 attachment factor 1-like [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 3.6e-55
Identity = 128/157 (81.53%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           MSEPEIA VPT+       DSPGDQAKE  KS KSFS SFSIWPPSQRTRDAV+KRLIET
Sbjct: 1   MSEPEIATVPTT-----EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIET 60

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LSNPSVLSKRYGTVP DEA +AARLIEEEAYSFAA+KA+ADDDGIEILQLYSREISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPHDEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKAKAAPDSTAENGSSSPAASATI-KEETPSVEES 157
           +TVKA+AA DSTAENGSS+P  S T  KEETPSV+ES
Sbjct: 121 DTVKARAASDSTAENGSSAPVVSTTTDKEETPSVQES 152

[Close]

BLAST of MS008724 vs. NCBI nr
Match: XP_023535662.1 (MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.8 bits (569), Expect = 1.0e-54
Identity = 127/157 (80.89%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           MSEPEIA VPT+       DSPGDQAKE  KS KSFS SFSIWPPSQRTRDAV+KRLIET
Sbjct: 1   MSEPEIATVPTT-----EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIET 60

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LSNPSVLSKRYGTVP +EA +AARLIEEEAYSFAA+KA+ADDDGIEILQLYSREISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKAKAAPDSTAENGSSSPAASATI-KEETPSVEES 157
           +TVKA+AA DSTAENGSS+P  S T  KEETPSV+ES
Sbjct: 121 DTVKARAASDSTAENGSSAPVVSTTTDKEETPSVQES 152

[Close]

BLAST of MS008724 vs. NCBI nr
Match: XP_004141279.1 (MFP1 attachment factor 1 [Cucumis sativus] >KGN55241.1 hypothetical protein Csa_012612 [Cucumis sativus])

HSP 1 Score: 223.4 bits (568), Expect = 1.4e-54
Identity = 128/159 (80.50%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MSEPEIAA-VPT--SPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRL 60
           MS+P+IAA  PT    P+       GDQAKE TKSPKSF+ SFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQ+EAAEAARLIEEEAYSFAA KA+ADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES 157
           RTLETVKA+AA DSTAENGSS P  S T  EETPSVEES
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEES 159

[Close]

BLAST of MS008724 vs. ExPASy Swiss-Prot
Match: Q9M7N6 (MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-31
Identity = 75/130 (57.69%), Postives = 99/130 (76.15%), Query Frame = 0


Query: 34  KSFSASFSIWPPSQRTRDAVVKRLIETLSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSF 93
           K  + SFSIWPP+QRTRDAV+ RLIE+LS PS+LSKRYGT+PQDEA+E ARLIEEEA++ 
Sbjct: 20  KPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFAA 79

Query: 94  AASKANADDDGIEILQLYSREISKRTLETVKAKAAPDSTAENGS---------SSPAASA 153
           A S A+  DDGIEILQ+YS+EISKR ++TVK+++AP + +E  S         S P++++
Sbjct: 80  AGSTASDADDGIEILQVYSKEISKRMIDTVKSRSAPAAASEGESKPSELPADASEPSSAS 139

Query: 154 TIKEETPSVE 155
            +  E  SVE
Sbjct: 140 GLTGEVSSVE 149

[Close]

BLAST of MS008724 vs. ExPASy Swiss-Prot
Match: Q9C500 (WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-26
Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 11  TSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIETLSNPSVLSKR 70
           T P S+ A     D  KE     K    S  IWPP+Q+TRDAV+ RLIETLS  S+LSKR
Sbjct: 29  TDPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKR 88

Query: 71  YGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTLETVKAKAAPD 130
           YGT+  D+A   A+LIEEEAY  A++  ++DDDGI+IL+LYS+EISKR LE+VKA++  +
Sbjct: 89  YGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKARS--N 148

Query: 131 STAENGSSSPA---ASATIKEET-PSVEE 156
           ++  NGS   A   AS   K++  P+ EE
Sbjct: 149 ASVGNGSVEDANTDASEVSKDDAGPASEE 175

[Close]

BLAST of MS008724 vs. ExPASy Swiss-Prot
Match: Q9FMH6 (WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25
Identity = 65/129 (50.39%), Postives = 89/129 (68.99%), Query Frame = 0


Query: 1   MSEPEIAAVPTS--PPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLI 60
           M+E E  ++ TS  PP     +S      E  K+P   + S  IWPP+Q+TRDAV+ RLI
Sbjct: 1   MAETETESITTSSPPPISETENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLI 60

Query: 61  ETLSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKR 120
           ETLS  S+LSKR+G++  +EA+  A+ IE+EAY+ A++    DDDGIEIL+ YS+EISKR
Sbjct: 61  ETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKR 120

Query: 121 TLETVKAKA 128
            LE+VKAK+
Sbjct: 121 MLESVKAKS 129

[Close]

BLAST of MS008724 vs. ExPASy Swiss-Prot
Match: Q0WQ91 (WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           +S P+      S  +        D   E+TK  KS    FS+WPP Q++RD VV  +I+T
Sbjct: 12  VSTPQPQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKT 71

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LS  S+LS +YGT+  +EA+  A+ IEE+AY  A+   ++  DGI+ L++Y  E S+R +
Sbjct: 72  LSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMI 131

Query: 121 ETVKAKAAPDSTAENGSSSPAASATIK 148
           E+ + +        NGS     + TIK
Sbjct: 132 ESAEVR-----FKANGSMELLLNQTIK 151

[Close]

BLAST of MS008724 vs. ExPASy Swiss-Prot
Match: Q9M651 (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.0e-09
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 29  LTKSPKSFSASFSIWPPSQRTRDAVVKRLIETLSNPSVLSKRYGTVPQDEAAEAARLIEE 88
           L   P +F  S  +WPPS  TR A+++R+    S+ ++ +++YG++ +D+A E A+ IE+
Sbjct: 5   LDSRPHAF--SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIED 64

Query: 89  EAYSFAAS--KANADDDGIEILQLYSREISKRTLETVK----AKAAPDSTAENGSSSP 141
            A+S A    +   D DG   +QLY++E SK  LE +K    AK A        S SP
Sbjct: 65  IAFSTANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSP 120

[Close]

BLAST of MS008724 vs. ExPASy TrEMBL
Match: A0A6J1CNW8 (MFP1 attachment factor 1-like OS=Momordica charantia OX=3673 GN=LOC111012991 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 7.0e-73
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET
Sbjct: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES 157
           ETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES
Sbjct: 121 ETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES 156

[Close]

BLAST of MS008724 vs. ExPASy TrEMBL
Match: A0A6J1IP46 (MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477294 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 128/157 (81.53%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           MSEPEIA VPT+       DSPGDQAKE  KS KSFS SFSIWPPSQRTRDAV+KRLIET
Sbjct: 1   MSEPEIATVPTT-----EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIET 60

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LSNPSVLSKRYGTVP DEA +AARLIEEEAYSFAA+KA+ADDDGIEILQLYSREISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPHDEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKAKAAPDSTAENGSSSPAASATI-KEETPSVEES 157
           +TVKA+AA DSTAENGSS+P  S T  KEETPSV+ES
Sbjct: 121 DTVKARAASDSTAENGSSAPVVSTTTDKEETPSVQES 152

[Close]

BLAST of MS008724 vs. ExPASy TrEMBL
Match: A0A0A0L505 (MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G641730 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.6e-55
Identity = 128/159 (80.50%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MSEPEIAA-VPT--SPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRL 60
           MS+P+IAA  PT    P+       GDQAKE TKSPKSF+ SFSIWPPSQRTRDAV+KRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVIKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQ+EAAEAARLIEEEAYSFAA KA+ADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES 157
           RTLETVKA+AA DSTAENGSS P  S T  EETPSVEES
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEES 159

[Close]

BLAST of MS008724 vs. ExPASy TrEMBL
Match: A0A6J1FAY3 (MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443663 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 6.6e-55
Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           MSE EIA VPT+       DSPGDQAKE  KS KSFS SFSIWPPSQRTRDAV+KRLIET
Sbjct: 1   MSETEIATVPTT-----EQDSPGDQAKESPKSSKSFSTSFSIWPPSQRTRDAVIKRLIET 60

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LSNPSVLSKRYGTVP +EA +AARLIEEEAYSFAA+KA+ADDDGIEILQLYSREISKRTL
Sbjct: 61  LSNPSVLSKRYGTVPHEEATDAARLIEEEAYSFAAAKASADDDGIEILQLYSREISKRTL 120

Query: 121 ETVKAKAAPDSTAENGSSSPAASATIKEETPSVEE 156
           +TVKA+AA DSTAENGSS+P  S T KEETPSV+E
Sbjct: 121 DTVKARAASDSTAENGSSAPVVSTTDKEETPSVQE 150

[Close]

BLAST of MS008724 vs. ExPASy TrEMBL
Match: A0A5A7V8G3 (MFP1 attachment factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002960 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 128/159 (80.50%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MSEPEIAA-VPT--SPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRL 60
           MS+P+IAA  PT    P+       GDQAKE TKSPKSF+ SFSIWPPSQRTRDAVVKRL
Sbjct: 1   MSDPQIAAGTPTEHDSPTPPTDSQVGDQAKESTKSPKSFNTSFSIWPPSQRTRDAVVKRL 60

Query: 61  IETLSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISK 120
           IETLSNPSVLSKRYGTVPQ+EAAEAARLIEEEAYSFAA KA+ADDDGIEILQLYSREISK
Sbjct: 61  IETLSNPSVLSKRYGTVPQEEAAEAARLIEEEAYSFAAGKASADDDGIEILQLYSREISK 120

Query: 121 RTLETVKAKAAPDSTAENGSSSPAASATIKEETPSVEES 157
           RTLETVKA+AA DSTAENGSS P  S T  EETPSVE+S
Sbjct: 121 RTLETVKARAASDSTAENGSSPPVVSTTTNEETPSVEQS 159

[Close]

BLAST of MS008724 vs. TAIR 10
Match: AT1G47200.1 (WPP domain protein 2 )

HSP 1 Score: 119.4 bits (298), Expect = 2.6e-27
Identity = 75/149 (50.34%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 11  TSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIETLSNPSVLSKR 70
           T P S+ A     D  KE     K    S  IWPP+Q+TRDAV+ RLIETLS  S+LSKR
Sbjct: 29  TDPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSKR 88

Query: 71  YGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTLETVKAKAAPD 130
           YGT+  D+A   A+LIEEEAY  A++  ++DDDGI+IL+LYS+EISKR LE+VKA++  +
Sbjct: 89  YGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKARS--N 148

Query: 131 STAENGSSSPA---ASATIKEET-PSVEE 156
           ++  NGS   A   AS   K++  P+ EE
Sbjct: 149 ASVGNGSVEDANTDASEVSKDDAGPASEE 175

[Close]

BLAST of MS008724 vs. TAIR 10
Match: AT5G43070.1 (WPP domain protein 1 )

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-26
Identity = 65/129 (50.39%), Postives = 89/129 (68.99%), Query Frame = 0


Query: 1   MSEPEIAAVPTS--PPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLI 60
           M+E E  ++ TS  PP     +S      E  K+P   + S  IWPP+Q+TRDAV+ RLI
Sbjct: 1   MAETETESITTSSPPPISETENSTTLPTTETEKNPNPVTISLRIWPPTQKTRDAVINRLI 60

Query: 61  ETLSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKR 120
           ETLS  S+LSKR+G++  +EA+  A+ IE+EAY+ A++    DDDGIEIL+ YS+EISKR
Sbjct: 61  ETLSTESILSKRFGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKR 120

Query: 121 TLETVKAKA 128
            LE+VKAK+
Sbjct: 121 MLESVKAKS 129

[Close]

BLAST of MS008724 vs. TAIR 10
Match: AT5G27940.1 (WPP domain protein 3 )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 1   MSEPEIAAVPTSPPSKAATDSPGDQAKELTKSPKSFSASFSIWPPSQRTRDAVVKRLIET 60
           +S P+      S  +        D   E+TK  KS    FS+WPP Q++RD VV  +I+T
Sbjct: 12  VSTPQPQLESRSDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKT 71

Query: 61  LSNPSVLSKRYGTVPQDEAAEAARLIEEEAYSFAASKANADDDGIEILQLYSREISKRTL 120
           LS  S+LS +YGT+  +EA+  A+ IEE+AY  A+   ++  DGI+ L++Y  E S+R +
Sbjct: 72  LSTDSILSYKYGTIKPEEASAVAKSIEEKAYDIASRFVSS--DGIKNLEVYGIETSERMI 131

Query: 121 ETVKAKAAPDSTAENGSSSPAASATIK 148
           E+ + +        NGS     + TIK
Sbjct: 132 ESAEVR-----FKANGSMELLLNQTIK 151

[Close]

BLAST of MS008724 vs. TAIR 10
Match: AT5G19320.1 (RAN GTPase activating protein 2 )

HSP 1 Score: 62.8 bits (151), Expect = 2.9e-10
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 29  LTKSPKSFSASFSIWPPSQRTRDAVVKRLIETLSNPSVLSKRYGTVPQDEAAEAARLIEE 88
           L   P +F  S  +WPPS  TR A+++R+    S+ ++ +++YG++ +D+A E A+ IE+
Sbjct: 5   LDSRPHAF--SIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIED 64

Query: 89  EAYSFAAS--KANADDDGIEILQLYSREISKRTLETVK----AKAAPDSTAENGSSSP 141
            A+S A    +   D DG   +QLY++E SK  LE +K    AK A        S SP
Sbjct: 65  IAFSTANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPVAKVAARELISEDSVSP 120

[Close]

BLAST of MS008724 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 )

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-09
Identity = 33/106 (31.13%), Postives = 62/106 (58.49%), Query Frame = 0


Query: 31  KSPKSFSASFSIWPPSQRTRDAVVKRLIETLSNPSVLSKRYGTVPQDEAAEAARLIEEEA 90
           K+ ++   S  +WPPS+ TR  +V+R+ + ++ PS+ S++YG +  +EA + A+ IE+ A
Sbjct: 6   KTTQNRVLSVKMWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLA 65

Query: 91  YSFAAS--KANADDDGIEILQLYSREISKRTLETVKAKAAPDSTAE 135
           ++ A    +   D DG   + +Y++E SK  L+ +K     +S  E
Sbjct: 66  FATANKHFQNEPDGDGTSAVHVYAKESSKLMLDVIKRGPQEESEVE 111

The following BLAST results are available for this feature:

BLAST of MS008724 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143006.1	1.4e-72	100.00	MFP1 attachment factor 1-like [Momordica charantia]	[more]
KAG6591406.1	1.6e-55	81.29	MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022977133.1	3.6e-55	81.53	MFP1 attachment factor 1-like [Cucurbita maxima]	[more]
XP_023535662.1	1.0e-54	80.89	MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_004141279.1	1.4e-54	80.50	MFP1 attachment factor 1 [Cucumis sativus] >KGN55241.1 hypothetical protein Csa_...	[more]

BLAST of MS008724 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7N6	2.9e-31	57.69	MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1	[more]
Q9C500	3.6e-26	50.34	WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=...	[more]
Q9FMH6	3.1e-25	50.39	WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=...	[more]
Q0WQ91	1.6e-13	36.05	WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=...	[more]
Q9M651	4.0e-09	35.59	RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 ...	[more]

BLAST of MS008724 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CNW8	7.0e-73	100.00	MFP1 attachment factor 1-like OS=Momordica charantia OX=3673 GN=LOC111012991 PE=...	[more]
A0A6J1IP46	1.7e-55	81.53	MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111477294 PE=4 S...	[more]
A0A0A0L505	6.6e-55	80.50	MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_4G641730 PE=4 SV=1	[more]
A0A6J1FAY3	6.6e-55	80.65	MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443663 PE=4...	[more]
A0A5A7V8G3	1.1e-54	80.50	MFP1 attachment factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of MS008724 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47200.1	2.6e-27	50.34	WPP domain protein 2	[more]
AT5G43070.1	2.2e-26	50.39	WPP domain protein 1	[more]
AT5G27940.1	1.1e-14	36.05	WPP domain protein 3	[more]
AT5G19320.1	2.9e-10	35.59	RAN GTPase activating protein 2	[more]
AT3G63130.1	5.4e-09	31.13	RAN GTPase activating protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038214	WPP domain superfamily	GENE3D	1.10.246.200	WPP domain	coord: 39..134 e-value: 2.8E-39 score: 135.4
IPR025265	WPP domain	PFAM	PF13943	WPP	coord: 39..130 e-value: 2.0E-38 score: 130.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..42
None	No IPR available	PANTHER	PTHR34362:SF1	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 8..147
IPR044692	WPP domain-containing protein 1/2/3	PANTHER	PTHR34362	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 8..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008724.1	MS008724.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048527	lateral root development
biological_process	GO:0000278	mitotic cell cycle